DNA & RNA Element - microRNA |
Mirbase Acc | miRNA Name | Gene ID | Gene Symbol | miRNA Alignment | Alignment | Gene Alignment | miRNA Start | miRNA End | Gene Start | Gene End | Genome Coordinates | Conservation | Align Score | Seed Cat | Energy | mirSVR Score |
MIMAT0000129 | mmu-miR-30a* | 110379 | Sec13 | cgacguUUGUAGGCUGACUUUc | |||:||| :|||||| | uaauuuAACGUCCAGCUGAAAg | 2 | 17 | 155 | 176 | [mm9:6:113678168-113678189:-] | 0.5945 | 152 | 6 | -21.70 | -0.1235 |
MIMAT0004524 | mmu-miR-30b* | 110379 | Sec13 | cugcaUUUGUA--GGU-GUAGGGuc | |||| | |:: |||||| | cauagAAACUUUACUGUCAUCCC-- | 3 | 18 | 276 | 298 | [mm9:6:113678046-113678068:-] | 0.5554 | 127 | 0 | -13.55 | -0.2140 |
MIMAT0000161 | mmu-miR-151-3p | 110379 | Sec13 | ggagUUCCUCGGAGUCA-GAUc | :| |||:| |||| ||| | ggaaGAAGAGUCCCAGUGCUAc | 2 | 18 | 58 | 79 | [mm9:6:113678265-113678286:-] | 0.5865 | 125 | 0 | -13.67 | -0.2716 |
MIMAT0004546 | mmu-miR-202-5p | 110379 | Sec13 | uuUCUUCAUAU-ACGUAUCCUu | | || ||| ||||||| | | auAAAAUCAUAUUGCAUAGAAa | 2 | 20 | 262 | 283 | [mm9:6:113678061-113678082:-] | 0.6041 | 130 | 0 | -9.05 | -0.1069 |
MIMAT0000249 | mmu-miR-30e* | 110379 | Sec13 | cgacAUUUGUAGGCUGACUUUc | | |||:||| :|||||| | uaauUUAACGUCCAGCUGAAAg | 2 | 19 | 155 | 176 | [mm9:6:113678168-113678189:-] | 0.5945 | 154 | 6 | -21.70 | -0.1235 |
MIMAT0000378 | mmu-miR-300 | 110379 | Sec13 | cuucucucgaacgggAACGUAu | |||||| | gcuaauaaaaucauaUUGCAUa | 2 | 8 | 258 | 279 | [mm9:6:113678065-113678086:-] | 0.6041 | 120 | 6 | -8.36 | -0.2409 |
MIMAT0004631 | mmu-miR-29a* | 110379 | Sec13 | gacuUGUGGUUUUCUUUAGUca | | :|:|| | |||||| | auccAAGCUAAUA-AAAUCAua | 3 | 19 | 252 | 272 | [mm9:6:113678072-113678092:-] | 0.5993 | 132 | 0 | -6.33 | -0.1307 |
MIMAT0004634 | mmu-miR-31* | 110379 | Sec13 | cuaccgUUA-UACAACCGUAUCgu | ||| || || |||||| | uaauaaAAUCAUAUU-GCAUAGaa | 3 | 18 | 260 | 282 | [mm9:6:113678062-113678084:-] | 0.6041 | 134 | 0 | -7.10 | -0.3155 |
MIMAT0000549 | mmu-miR-322* | 110379 | Sec13 | caCAACGUCGCGAAGUACAaa | | || | ||||||| | caGCUGAAAGUAUUCAUGUaa | 3 | 20 | 167 | 187 | [mm9:6:113678157-113678177:-] | 0.5945 | 127 | 0 | -10.90 | -0.1225 |
MIMAT0000578 | mmu-miR-337-3p | 110379 | Sec13 | uccguaguauauccUCGACUu | |||||| | guaauuuaacguccAGCUGAa | 2 | 8 | 154 | 174 | [mm9:6:113678170-113678190:-] | 0.5945 | 120 | 6 | -11.27 | -0.1402 |
MIMAT0004647 | mmu-miR-338-5p | 110379 | Sec13 | gugaGUCGUGGUCCUAUAACaa | :| :| | |||||| | aagcUAAUAAAAUCAUAUUGca | 3 | 19 | 256 | 277 | [mm9:6:113678067-113678088:-] | 0.6041 | 122 | 0 | -5.38 | -0.1950 |
MIMAT0000672 | mmu-miR-199b* | 110379 | Sec13 | cuuguccaucagauUUGUGACCc | |||||||| | gugcccacacaugcAACACUGGg | 2 | 10 | 97 | 119 | [mm9:6:113678225-113678247:-] | 0.5945 | 145 | 7 | -17.69 | -0.1375 |
MIMAT0000672 | mmu-miR-199b* | 110379 | Sec13 | cuuguccaucAGAUUUG-UGACCc | || |||| ||||| | uggaacaaccUCCAAACAACUGGg | 2 | 14 | 36 | 59 | [mm9:6:113678285-113678308:-] | 0.5784 | 121 | 0 | -19.65 | -0.3886 |
MIMAT0002106 | mmu-miR-465a-5p | 110379 | Sec13 | agUGUAGUCACGGU-AAGAUUUAu | | || | | ::| ||:||||| | acAAAUGACUAUUAUUUUUAAAUa | 2 | 22 | 191 | 214 | [mm9:6:113678130-113678153:-] | 0.5945 | 140 | 0 | -7.17 | -0.1362 |
MIMAT0004759 | mmu-miR-466a-5p | 110379 | Sec13 | auacauGUACAUGUGUGUGUAu | |: ||:| ||||||| | cacaccCGAGUGCCCACACAUg | 2 | 17 | 88 | 109 | [mm9:6:113678235-113678256:-] | 0.5945 | 156 | 7 | -16.87 | -0.1165 |
MIMAT0002111 | mmu-miR-470 | 110379 | Sec13 | ugaguggucaCGGUCAGGUUCuu | ||:| |||||| | uugguuaaaaGCUA-UCCAAGcu | 3 | 14 | 239 | 260 | [mm9:6:113678084-113678105:-] | 0.5993 | 127 | 0 | -12.23 | -0.1573 |
MIMAT0003186 | mmu-miR-369-3p | 110379 | Sec13 | uuUCUAGUUGGUACAUAAUAa | :|| ||| :: |||||| | aaGGAACAAAUGACUAUUAUu | 2 | 20 | 186 | 206 | [mm9:6:113678138-113678158:-] | 0.5945 | 127 | 6 | -7.99 | -0.2649 |
MIMAT0003891 | mmu-miR-770-3p | 110379 | Sec13 | ggUC-GAGGUGCAG--UC-CGGGUGc | || :||||| | || |||||| | caAGAUUCCACACCCGAGUGCCCACa | 2 | 21 | 80 | 105 | [mm9:6:113678239-113678264:-] | 0.5945 | 122 | 6 | -21.46 | -0.5639 |
MIMAT0003735 | mmu-miR-672 | 110379 | Sec13 | agUGUGUGUCAUGUGGUUGGAGu | || :|: |: | ||||||| | uuACCUAUUCUGGAACAACCUCc | 2 | 22 | 26 | 48 | [mm9:6:113678296-113678318:-] | 0.5195 | 153 | 7 | -14.17 | -0.6859 |
MIMAT0003896 | mmu-miR-763 | 110379 | Sec13 | cggugaccaagaaGGGUCGACc | :||||||| | uaguaauuuaacgUCCAGCUGa | 2 | 10 | 152 | 173 | [mm9:6:113678171-113678192:-] | 0.5945 | 141 | 7 | -13.97 | -1.2386 |
MIMAT0003474 | mmu-miR-694 | 110379 | Sec13 | gaaguccGUUGUAAAAGUc | :| :|||||:| | aaaugacUAUUAUUUUUAa | 2 | 13 | 193 | 211 | [mm9:6:113678133-113678151:-] | 0.5945 | 128 | 0 | -3.13 | -0.2025 |
MIMAT0003497 | mmu-miR-707 | 110379 | Sec13 | gcauccguucgccgUACUGAc | |||||| | cauguaaggaacaaAUGACUa | 2 | 8 | 181 | 201 | [mm9:6:113678143-113678163:-] | 0.5945 | 120 | 6 | -11.63 | -0.3792 |
MIMAT0004871 | mmu-miR-465b-5p | 110379 | Sec13 | gucUAGUCGUGGU-AAGAUUUAu | || | :|::| ||:||||| | caaAUGACUAUUAUUUUUAAAUa | 2 | 20 | 192 | 214 | [mm9:6:113678130-113678152:-] | 0.5945 | 142 | 0 | -8.09 | -0.1362 |
MIMAT0004873 | mmu-miR-465c-5p | 110379 | Sec13 | gucUAGUCGCGGU-AAGAUUUAu | || | : ::| ||:||||| | caaAUGACUAUUAUUUUUAAAUa | 2 | 20 | 192 | 214 | [mm9:6:113678130-113678152:-] | 0.5945 | 134 | 0 | -6.08 | -0.1389 |
MIMAT0004875 | mmu-miR-466b-5p | 110379 | Sec13 | guacauGUACAUGUGUGUGUAg | |: ||:| ||||||| | cacaccCGAGUGCCCACACAUg | 2 | 17 | 88 | 109 | [mm9:6:113678235-113678256:-] | 0.5945 | 156 | 7 | -14.76 | -0.1165 |
MIMAT0004877 | mmu-miR-466c-5p | 110379 | Sec13 | auacauGUACGUGUGUGUGUAg | |: |::| ||||||| | cacaccCGAGUGCCCACACAUg | 2 | 17 | 88 | 109 | [mm9:6:113678235-113678256:-] | 0.5945 | 152 | 7 | -13.61 | -0.1165 |
MIMAT0004879 | mmu-miR-466e-5p | 110379 | Sec13 | auacauGUACAUGUGUGUGUAg | |: ||:| ||||||| | cacaccCGAGUGCCCACACAUg | 2 | 17 | 88 | 109 | [mm9:6:113678235-113678256:-] | 0.5945 | 156 | 7 | -14.67 | -0.1165 |
MIMAT0005837 | mmu-miR-1187 | 110379 | Sec13 | aaUGUGUGUAUGUGUGUGUGUAu | |||| |: :::| ||||||| | ccACACCCGAGUGCCCACACAUg | 2 | 22 | 87 | 109 | [mm9:6:113678235-113678257:-] | 0.5945 | 165 | 7 | -19.52 | -0.1177 |
MIMAT0005847 | mmu-miR-1190 | 110379 | Sec13 | cugucuccccuuggaGUCGACu | |||||| | uaguaauuuaacgucCAGCUGa | 2 | 8 | 152 | 173 | [mm9:6:113678171-113678192:-] | 0.5945 | 120 | 6 | -13.92 | -0.2393 |
MIMAT0007864 | mmu-miR-1897-5p | 110379 | Sec13 | gggggagaaagaGGUAGGUUUc | |:||||||: | uuugguuaaaagCUAUCCAAGc | 2 | 11 | 238 | 259 | [mm9:6:113678085-113678106:-] | 0.5993 | 130 | 0 | -11.56 | -0.1209 |
MIMAT0007868 | mmu-miR-1903 | 110379 | Sec13 | acAGAGUCCUU-CUUCUUCUUCc | || | || ::||||||| | ccUCCAAACAACUGGGAAGAAGa | 2 | 21 | 44 | 66 | [mm9:6:113678278-113678300:-] | 0.5784 | 143 | 7 | -15.80 | -0.3123 |
MIMAT0009409 | mmu-miR-1944 | 110379 | Sec13 | uuAGUCUUGAACUGUAAGUCGUGUCUc | | | || | |:||| |||:||| | gcUAAUAAAAUCAUAUU--GCAUAGAa | 2 | 26 | 258 | 282 | [mm9:6:113678062-113678086:-] | 0.6041 | 142 | 0 | -10.07 | -0.1051 |
MIMAT0009432 | mmu-miR-1959 | 110379 | Sec13 | gaggugacucgauGUAGGGg | |||||| | gaaacuuuacuguCAUCCC- | 2 | 8 | 280 | 298 | [mm9:6:113678046-113678064:-] | 0.5554 | 120 | 6 | -20.25 | -0.2609 |
MIMAT0009441 | mmu-miR-1968 | 110379 | Sec13 | ucAGGUGGUAGGAAUU----GUCGACgu | |::| :| :|||| |||||| | ugUUUAGUA-AUUUAACGUCCAGCUGaa | 3 | 23 | 148 | 174 | [mm9:6:113678170-113678196:-] | 0.5945 | 123 | 0 | -14.70 | -0.1083 |
MIMAT0011217 | mmu-miR-2141 | 110379 | Sec13 | uuGAAAAGAC--UG-UGGAGGa | || ||||| || |||||| | acCUAUUCUGGAACAACCUCCa | 2 | 18 | 28 | 49 | [mm9:6:113678295-113678316:-] | 0.5195 | 128 | 6 | -19.50 | -0.7680 |
MIMAT0012771 | mmu-miR-432 | 110379 | Sec13 | gacgggugacuagaugAGGUUCu | |||||| | uuuugguuaaaagcuaUCCAAGc | 2 | 8 | 237 | 259 | [mm9:6:113678085-113678107:-] | 0.5993 | 120 | 6 | -14.66 | -0.1444 |
MIMAT0012774 | mmu-miR-664 | 110379 | Sec13 | auccgaccCCUCAUUUACUUAu | ||| |||||| | | ucauguaaGGAACAAAUGACUa | 2 | 15 | 180 | 201 | [mm9:6:113678143-113678164:-] | 0.5945 | 122 | 0 | -8.28 | -0.1558 |
MIMAT0015643 | mmu-miR-3472 | 110379 | Sec13 | ccAAGGAAGGU---CGAAGACCGAUAAu | || :||::| :||:|||| ||| | uaUUAUUUUUAAAUAUUUUUGGCCAUUu | 2 | 24 | 200 | 227 | [mm9:6:113678117-113678144:-] | 0.5945 | 130 | 0 | -11.60 | -0.1194 |
MIMAT0004528 | mmu-miR-125a-3p | 110379 | Sec13 | ccgaGGGUUCUUGGAGUGGACa | | | :|: :||||||| | gcaaCACUGGGUGUUCACCUGc | 2 | 19 | 109 | 130 | [mm9:6:113678214-113678235:-] | 0.5945 | 146 | 7 | -17.71 | -0.4089 |
MIMAT0000223 | mmu-miR-193 | 110379 | Sec13 | ugacccUGAAACAUCCGGUCAa | |: || | ||||| | | uuuuaaAUAUUUUUGGCCAUUu | 2 | 17 | 206 | 227 | [mm9:6:113678117-113678138:-] | 0.5945 | 120 | 0 | -8.41 | -0.1507 |
MIMAT0000224 | mmu-miR-194 | 110379 | Sec13 | aggUGUACCUCAACGACAAUGu | :| ||| || ||||||| | gcaGCCUGGCCUUCCUGUUACc | 2 | 20 | 9 | 30 | [mm9:6:113678314-113678335:-] | 0.5745 | 159 | 7 | -12.82 | -0.3595 |
MIMAT0000229 | mmu-miR-199a-5p | 110379 | Sec13 | cuuguccaucagAC-UUGUGACCc | || |||||||| | agugcccacacaUGCAACACUGGg | 2 | 12 | 96 | 119 | [mm9:6:113678225-113678248:-] | 0.5945 | 146 | 7 | -20.07 | -0.1375 |
MIMAT0000233 | mmu-miR-200b | 110379 | Sec13 | aguaguaaugguccgUCAUAAu | |||||| | uaacguccagcugaaAGUAUUc | 2 | 8 | 160 | 181 | [mm9:6:113678163-113678184:-] | 0.5945 | 120 | 6 | -11.04 | -0.1058 |
MIMAT0000657 | mmu-miR-200c | 110379 | Sec13 | agguaguaaugggccgUCAUAAu | |||||| | uuaacguccagcugaaAGUAUUc | 2 | 8 | 159 | 181 | [mm9:6:113678163-113678185:-] | 0.5945 | 120 | 6 | -12.63 | -0.1058 |
MIMAT0000711 | mmu-miR-365 | 110379 | Sec13 | uaUUCCUAAAAAUCCCCGUAAu | || |||||| || |||| | uuAAAUAUUUUU--GGCCAUUu | 2 | 21 | 208 | 227 | [mm9:6:113678117-113678136:-] | 0.5945 | 129 | 0 | -6.40 | -0.1164 |
MIMAT0000739 | mmu-miR-375 | 110379 | Sec13 | agugcgcucggcuugCUUGUUu | |||||| | aaguauucauguaagGAACAAa | 2 | 8 | 174 | 195 | [mm9:6:113678149-113678170:-] | 0.5945 | 120 | 6 | -11.53 | -0.2956 |
MIMAT0003151 | mmu-miR-378 | 110379 | Sec13 | ggaagACUGAGGUUCAGGUCa | | |:|: | |||||| | uuuagUAAUUUAACGUCCAGc | 2 | 17 | 150 | 170 | [mm9:6:113678174-113678194:-] | 0.5945 | 124 | 6 | -12.53 | -0.2054 |
MIMAT0001537 | mmu-miR-429 | 110379 | Sec13 | ugccguaaUGGUCUGUCAUAAu | | | || |||||| | uaacguccAGCUGAAAGUAUUc | 2 | 15 | 160 | 181 | [mm9:6:113678163-113678184:-] | 0.5945 | 122 | 6 | -11.18 | -0.1058 |
MIMAT0003727 | mmu-miR-374 | 110379 | Sec13 | gugaaucguccaacAUAAUAua | |||||| | aaggaacaaaugacUAUUAUuu | 3 | 9 | 186 | 207 | [mm9:6:113678137-113678158:-] | 0.5945 | 120 | 0 | -3.92 | -0.1585 |
MIMAT0004859 | mmu-miR-193b | 110379 | Sec13 | ucgcccUGAAACACCCGGUCAa | |: || | ||||| | | uuuuaaAUAUUUUUGGCCAUUu | 2 | 17 | 206 | 227 | [mm9:6:113678117-113678138:-] | 0.5945 | 120 | 0 | -7.71 | -0.1507 |
MIMAT0004896 | mmu-miR-590-3p | 110379 | Sec13 | ugaucgaauAUGUAUUUUAau | || ||||||| | uauccaagcUA-AUAAAAUca | 3 | 13 | 251 | 270 | [mm9:6:113678074-113678093:-] | 0.5993 | 126 | 0 | -6.00 | -0.2007 |