Dmwd
DNA & RNA Element - AREsite
Gene NameMotifCDS AreaARE AreaEvidence
Dmwd; Dm9ATTTA44-20412470-2474
Dmwd; Dm9WTATTTATW44-20412468-2476
Dmwd; Dm9WWATTTAWW44-20412468-2476
DNA & RNA Element - microRNA
Mirbase AccmiRNA NameGene IDGene SymbolmiRNA AlignmentAlignmentGene AlignmentmiRNA StartmiRNA EndGene StartGene EndGenome CoordinatesConservationAlign ScoreSeed CatEnergymirSVR Score
MIMAT0000230mmu-miR-199a-3p13401DmwdauuGGUUACACGUCUG-AUGACa ||| |||| || ||||| gccCCACGCUGCACACAUACUGg220105127[mm9:7:19667777-19667799:+]0.65151270-14.47-0.1290
MIMAT0004665mmu-miR-218-1*13401DmwdccacgaACUGCCUUGGUACAAa ||: | ||||||| --aaugUGGAUGUCCCAUGUUc217120[mm9:7:19667673-19667692:+]0.59551447-14.07-0.1651
MIMAT0004667mmu-miR-199b13401DmwdauuGGUUACACGUCUG-AUGACa ||| |||| || ||||| gccCCACGCUGCACACAUACUGg220105127[mm9:7:19667777-19667799:+]0.65151270-14.47-0.1290
MIMAT0004759mmu-miR-466a-5p13401DmwdauacauguacauGUGUGUGUAu ::||||||| caagccccacgcUGCACACAUa211102123[mm9:7:19667774-19667795:+]0.65151427-14.01-0.3489
MIMAT0003733mmu-miR-66513401DmwduccCUGGAGUCGGAGGACCa |||: : ||||||| uguGACUGUUCACUCCUGGg218258277[mm9:7:19667930-19667949:+]0.61421457-18.77-0.4357
MIMAT0003895mmu-miR-764-3p13401DmwdugUCAACGGUG-AUA----CCGGAGGa :| ||:| | |:| ||||||| guGGAUGUCCCAUGUUCCCGGCCUCCu221430[mm9:7:19667676-19667702:+]0.59551427-20.34-0.8261
MIMAT0003451mmu-miR-67713401DmwdagucUUCGA-UUAGUAGUGACuu :| || || ||||||| cgcuGACCUCAAGAAUCACUGua3194668[mm9:7:19667718-19667740:+]0.65151330-12.72-0.1840
MIMAT0004867mmu-miR-32713401DmwduaGGA-GUACGG--GGAGUUCa ||| | ||: ||||||| acCCUCCCCGCUGACCUCAAGa2183859[mm9:7:19667710-19667731:+]0.65021437-18.89-1.1167
MIMAT0004875mmu-miR-466b-5p13401DmwdguacauguacauGUGUGUGUAg ::||||||| caagccccacgcUGCACACAUa211102123[mm9:7:19667774-19667795:+]0.65151427-14.01-0.3489
MIMAT0004877mmu-miR-466c-5p13401DmwdauacauGUACGUGUGUGUGUAg || || ::||||||| aagcccCACGC-UGCACACAUa217103123[mm9:7:19667775-19667795:+]0.65151507-16.58-0.3461
MIMAT0004879mmu-miR-466e-5p13401DmwdauacauguacauGUGUGUGUAg ::||||||| caagccccacgcUGCACACAUa211102123[mm9:7:19667774-19667795:+]0.65151427-14.01-0.3489
MIMAT0004884mmu-miR-466h13401DmwdauguguGUUC---GUGU-ACGUGUGu |||| |||: ||||||| cugcucCAAGCCCCACGCUGCACACa21796121[mm9:7:19667768-19667793:+]0.65151507-22.37-0.3557
MIMAT0004892mmu-miR-56813401DmwdcacacauauGUAAAUAUGua :|||||||| uggaccucuUAUUUAUACua312419438[mm9:7:19668091-19668110:+]0.63661310-6.81-0.1898
MIMAT0005830mmu-miR-466l13401DmwduuauacacacguacAUAAAUAu ||||||| uccccuggaccucuUAUUUAUa29414435[mm9:7:19668086-19668107:+]0.62541407-3.89-1.0088
MIMAT0005837mmu-miR-118713401DmwdaauguGUGUAUGUGUGUGUGUAu | || :| ::||||||| caagcCCCACGC-UGCACACAUa219102123[mm9:7:19667774-19667795:+]0.65151487-20.60-0.3517
MIMAT0005848mmu-miR-466j13401DmwdaauguguguacGUGU-ACGUGUGu |||: ||||||| gcuccaagcccCACGCUGCACACa21398121[mm9:7:19667770-19667793:+]0.65151477-17.98-0.3586
MIMAT0005849mmu-miR-119113401DmwdaucccGAUGU-AUCAUUCUGAc ||::| || |||||| aaucaCUGUAUUAACAAGACUa2175980[mm9:7:19667731-19667752:+]0.65151236-10.78-0.1995
MIMAT0005853mmu-miR-669e13401DmwduaCUU-GU-ACGUGUGUGUUCUGu ||| || ||:|: ||||||| aaGAAUCACUGUAUUAACAAGACu2215679[mm9:7:19667728-19667751:+]0.65151587-16.66-1.2025
MIMAT0005858mmu-miR-119713401DmwducUUCAUCUGGUACACAGGAu | | :||: ||||||| ccAUGGGGAUGUAGUGUCCUg220149169[mm9:7:19667821-19667841:+]0.63291477-15.34-0.2351
MIMAT0009407mmu-miR-194213401DmwdguuGGU-CUACUUCUGUA-GACu ||| | || | |||| ||| gccCCACGCUGCACACAUACUGg219105127[mm9:7:19667777-19667799:+]0.65151210-12.94-0.1278
MIMAT0009428mmu-miR-195613401DmwdaggcGACUGAGUCGGGACCUGa || ::|| |||||||| ccucCUUGUUC--CCCUGGACc219405424[mm9:7:19668077-19668096:+]0.62541517-21.73-0.4709
MIMAT0009460mmu-miR-1982.113401DmwdgacacccucuuguauCCCACUCu ||||||| gcccacaguaccccuGGGUGAGa29287309[mm9:7:19667959-19667981:+]0.61421407-16.14-0.5479
MIMAT0012771mmu-miR-43213401DmwdgacgggugaCUAGAUGAGGUUCu |: ||:||||||| augauggaaGGACUGCUCCAAGc21584106[mm9:7:19667756-19667778:+]0.65151547-18.67-0.2282
MIMAT0014852mmu-miR-3072*13401DmwdggACGGGAG--GGAGCCCCAGGGa ||| | | || |||||||| gcUGCACACAUACUGGGGGUCCCc221112135[mm9:7:19667784-19667807:+]0.65151557-30.23-0.1643
MIMAT0015640mmu-miR-3470a13401DmwdggUCGGAC-C-AGAUGUUUCACu :|:||| | |:| |||||| auGGUCUGUGAUUUUGAAAGUGu220359381[mm9:7:19668031-19668053:+]0.61421256-15.03-0.1006
MIMAT0000128mmu-miR-30a13401DmwdgaaggucagcuccuACAAAUGu |||||:| uauacuaaaguccuUGUUUGCa29432453[mm9:7:19668104-19668125:+]0.63661240-13.18-0.1042
MIMAT0000130mmu-miR-30b13401DmwducgacucacauccuACAAAUGu |||||:| uauacuaaaguccuUGUUUGCa29432453[mm9:7:19668104-19668125:+]0.63661240-9.06-0.1064
MIMAT0000140mmu-miR-12813401DmwduuucucuggccaAGUGACAcu ||||||| ugaccucaagaaUCACUGUau3104969[mm9:7:19667721-19667741:+]0.65151250-11.95-0.1032
MIMAT0000144mmu-miR-13213401DmwdgcuGGUACCGACAUCUGACAAu ||| | ||| ||||||| gucCCA-GCAUGU-GACUGUUc220249268[mm9:7:19667921-19667940:+]0.61421517-15.71-0.3948
MIMAT0000153mmu-miR-14113401DmwdgguAGAAAUGGUCU-GUCACAAu ||| |: | | ||||||| uguUCUCUGAAACAUCAGUGUUa220215237[mm9:7:19667887-19667909:+]0.61421507-15.41-1.1508
MIMAT0000153mmu-miR-14113401DmwdggUAGAAAU--GGUCUGUCACAAu :||| |: :: || |||||| ugGUCUGUGAUUUUGAAAGUGUUa221360383[mm9:7:19668032-19668055:+]0.61421236-13.17-0.1591
MIMAT0000248mmu-miR-30e13401DmwdgaAGGUCAGUUC--CUACAAAUGu | :| | ||| |||||:| uuUAUACUAAAGUCCUUGUUUGCa221430453[mm9:7:19668102-19668125:+]0.63661270-13.23-0.1042
MIMAT0004577mmu-miR-29913401DmwduucgccaaauGGCAGGGU-GUAu |:|||||| ||| aaccauauccCUGUCCCAGCAUg213237259[mm9:7:19667909-19667931:+]0.61421200-17.95-0.6615
MIMAT0000381mmu-miR-34c13401DmwdcguUAGUCGAUUGAUGUGACGGa :|| | | | ||||||| ccuGUCCUCCACC--CACUGCCa221182202[mm9:7:19667854-19667874:+]0.61421417-12.54-0.4637
MIMAT0000382mmu-miR-34b-5p13401DmwduguuagucgauuaauGUGACGGa ||||||| gcccuguccuccaccCACUGCCa29180202[mm9:7:19667852-19667874:+]0.61421407-11.61-0.4899
MIMAT0000513mmu-miR-19b13401DmwdagucaaaacguaccUAAACGUgu :|||||| auacuaaaguccuuGUUUGCA--310433453[mm9:7:19668105-19668125:+]0.63661210-4.26-0.1359
MIMAT0000514mmu-miR-30c13401DmwdcgacucucacauccuACAAAUGu |||||:| uuauacuaaaguccuUGUUUGCa29431453[mm9:7:19668103-19668125:+]0.63661240-9.19-0.1064
MIMAT0000515mmu-miR-30d13401DmwdgaaggucagccccuACAAAUGu |||||:| uauacuaaaguccuUGUUUGCa29432453[mm9:7:19668104-19668125:+]0.63661240-13.18-0.1042
MIMAT0000519mmu-miR-200a13401DmwduguAGCAAUGGUCU-GUCACAAu || |: | | ||||||| uguUCUCUGAAACAUCAGUGUUa220215237[mm9:7:19667887-19667909:+]0.61421427-14.41-1.1488
MIMAT0000519mmu-miR-200a13401DmwdugUAG-CAAU-GGUCUGUCACAAu :|| || | :: || |||||| ugGUCUGUGAUUUUGAAAGUGUUa221360383[mm9:7:19668032-19668055:+]0.61421226-12.36-0.1576
MIMAT0000542mmu-miR-34a13401DmwduguuggucgauucuGUGACGGu ||||||| cccuguccuccaccCACUGCCa29181202[mm9:7:19667853-19667874:+]0.61421407-15.82-0.4899
MIMAT0000651mmu-miR-19a13401DmwdagucaaaacguaucUAAACGUgu :|||||| auacuaaaguccuuGUUUGCA--310433453[mm9:7:19668105-19668125:+]0.63661210-4.26-0.1359
MIMAT0000659mmu-miR-21213401DmwdacCGGCACUGACCUCUGACAAu |:| :| | ||||||| cuGUCCCAGCAUGUGACUGUUc221247268[mm9:7:19667919-19667940:+]0.61421447-12.80-0.4220
MIMAT0004745mmu-miR-384-5p13401DmwduguaacggaUCCUUAACAAAUGu || ||||||:| uuauacuaaAGUCCUUGUUUGCa215431453[mm9:7:19668103-19668125:+]0.63661300-9.76-0.1074
MIMAT0001418mmu-miR-43113401DmwdacguacugccggacGUUCUGu |||||| aaucacuguauuaaCAAGACu285979[mm9:7:19667731-19667751:+]0.65151206-8.63-0.1417
MIMAT0001420mmu-miR-43313401DmwdugUGGCUCCUC-GGGUAGUACUa |:: | || |: ||||||| guAUUAACAAGACUAAUCAUGAu2216688[mm9:7:19667738-19667760:+]0.65151477-11.37-0.9018
MIMAT0001542mmu-miR-449a13401DmwduggucgauuGUUAUGUGACGGu | | ||||||| cccuguccuCCACCCACUGCCa214181202[mm9:7:19667853-19667874:+]0.61421417-16.55-0.4899
MIMAT0003460mmu-miR-449c13401DmwdggucgaucGUUACGUGACGGa | | ||||||| ccuguccuCCACCCACUGCCa214182202[mm9:7:19667854-19667874:+]0.61421417-13.05-0.4899
MIMAT0003486mmu-miR-49113401DmwdggaGUACCUUCCC---AAGGGGUGa || || |||| ||||||| gggCAGGGCAGGGGCCAUCCCCACu220310334[mm9:7:19667982-19668006:+]0.61421547-28.08-0.1649
MIMAT0005447mmu-miR-449b13401DmwdcggucgauuguuGUGACGGa ||||||| cuguccuccaccCACUGCCa29183202[mm9:7:19667855-19667874:+]0.61421407-13.36-0.4899
DNA & RNA Element - TRANSFAC
AccessionASDescriptionSpeciesEntrezPubmedBinding Info
G063094DmwdMus musculus1340119536157 0 0 R53678; MOUSE$DMWD_01; Binding factors: mmu-miR-34a-5p , mmu-miR-449a-5p
DNA & RNA Element - RepTar
Gene NamemiRNABeginEndProfile
Dmwdmmu-miR-18astarbeg:299end:316pic:3' GTCTTCCTCGTGAATCCCGTCA 5'& |.|.. ||||||| &5' ------GGGTGAG-AGGGCAG- 3'
Dmwdmmu-miR-34abeg:187end:203pic:3' TGTTGGTCGATTCTGTGACGGT 5'& ||| | |||||||| &5' ----CCACC-----CACTGCCA 3'
Dmwdmmu-miR-34b-5pbeg:192end:202pic:3' TGTTAGTCGATTAATGTGACGGA 5'& ||||||| &5' ---------------CACTGCC- 3'
Dmwdmmu-miR-449bbeg:192end:202pic:3' CGGTCGATTGTTGTGACGGA 5'& ||||||| &5' ------------CACTGCC- 3'
Dmwdmmu-miR-449cbeg:192end:202pic:3' GGTCGATCGTTACGTGACGGA 5'& ||||||| &5' -------------CACTGCC- 3'
Dmwdmmu-miR-449abeg:192end:203pic:3' TGGTCGATTGTTATGTGACGGT 5'& |||||||| &5' --------------CACTGCCA 3'
Dmwdmmu-miR-218-1starbeg:1end:20pic:3' CCACGAACTGCCTTGGTACAAA 5'& ||. ||.| ||||||| &5' --TGTG-GATGTC-CCATGTT- 3'
Dmwdmmu-miR-327beg:41end:59pic:3' TAGGAGT-ACGGGGAGTTCA 5'& ||| |. || ||||||| &5' -TCCCCGCTGA-CCTCAAG- 3'
Dmwdmmu-miR-432beg:91end:106pic:3' GACGGGTGACTAGATGAGGTTCT 5'& || ||.||||||| &5' ---------GA-CTGCTCCAAG- 3'
Dmwdmmu-miR-665beg:258end:277pic:3' TCCCTGGAGTCGGAGGACCA 5'& |||. ||||||| &5' ---GACTGTTCACTCCTGG- 3'
Dmwdmmu-miR-132beg:249end:268pic:3' GCTGGTACCG-ACATCTGACAAT 5'& ||| || ||| ||||||| &5' ---CCA--GCATGT-GACTGTT- 3'
Dmwdmmu-miR-1982.1beg:299end:310pic:3' GACACCCTCTTGTATCCCACTCT 5'& |||||||| &5' ---------------GGGTGAGA 3'
Dmwdmcmv-miR-m21-1beg:406end:421pic:3' GCCGAACTTGCACAGGGGATA 5'& |||| ||||||. &5' ---CTTGT-----TCCCCTG- 3'
Dmwdmcmv-miR-M23-2beg:173end:193pic:3' GGC-GAACTGGCTCCGGGGGTA 5'& | ||||.|| | ||.||| &5' --GCCTTGGCCCTGTCCTCCA- 3'
Dmwdmmu-let-7cbeg:234end:255pic:3' TTGGTATGTTGGATGATGGAGT 5'& |||||||. |||. || || &5' AACCATATC-CCTGT--CC-CA 3'
Dmwdmmu-miR-1198beg:105end:124pic:3' GGTTCGGTCGGTCCTTGTGTAT 5'& ||| ||. || ||||||| &5' CCACGCT-GC-----ACACATA 3'
Dmwdmmu-miR-135abeg:20end:38pic:3' AGTGTATCCTTATTTTTCGGTAT 5'& || ||||||| &5' -------GGCCTCCT-AGCCATA 3'
Dmwdmmu-miR-135bbeg:20end:38pic:3' AGTGTATCCTTACTTTTCGGTAT 5'& || ||||||| &5' -------GGCCTCCT-AGCCATA 3'
Dmwdmmu-miR-141beg:217end:238pic:3' GGTAGAAATGGTCTGTCACAAT 5'& ||| || |||||||| &5' ---TCTGAAACAT-CAGTGTTA 3'
Dmwdmmu-miR-147beg:100end:121pic:3' ATCGTCTTCGTAAA--GGCGTGTG 5'& |||| |.|||||| &5' ------AAGCCCCACGCTGCACAC 3'
Dmwdmmu-miR-150beg:259end:281pic:3' GTGACCATGTTCCCAACCCTCT 5'& |||| || ||||||| &5' -ACTGTT-CACTCC-TGGGAGA 3'
Dmwdmmu-miR-150starbeg:180end:203pic:3' GATAGGGGGTCCGGACATGGTC 5'& ||.|||.||| || |.||| &5' CTGTCCTCCAC-CCACTGCCA- 3'
Dmwdmmu-miR-15astarbeg:156end:178pic:3' ACTCCGTCGTGT--CATACCGGAC 5'& |.|| . ||.|||||| &5' ----GTAGTGTCCTGTGTGGCCT- 3'
Dmwdmmu-miR-1895beg:402end:422pic:3' AGGAGGAGCAGGAGGAGCCCCC 5'& ||||||.||.| ||| || &5' -CCTCCTTGTTCCCCT-GG--- 3'
Dmwdmmu-miR-1898beg:163end:183pic:3' CTAGGGGACACTTGGAACTGGA 5'& .|||. |||| .|||||.|| &5' -GTCCTGTGTG-GCCTTGGCC- 3'
Dmwdmmu-miR-190bbeg:222end:246pic:3' TTG-GGTTATAGTTTGTATAGT 5'& ||| .||.|.|.|| |||||| &5' AACATCAGTGTTAACCATATC- 3'
Dmwdmmu-miR-1928beg:144end:164pic:3' CTCG--ACCGTTACATCGA 5'& ||| ||| .||||||. &5' -AGCCATGGGGATGTAGT- 3'
Dmwdmmu-miR-1933-5pbeg:68end:89pic:3' TTTGATTCTGGCTTGTGGTACTGA 5'& ||| |||||. |.|||||. &5' -AAC-AAGACTA---ATCATGAT- 3'
Dmwdmmu-miR-1934beg:304end:327pic:3' TCTCCTGCTTCGTCCCCTGGTCT 5'& |||||.| .||||||| ||| &5' AGAGGGCAGGGCAGGGG-CCA-- 3'
Dmwdmmu-miR-1940beg:171end:193pic:3' TTGACGAGGTGGAAGAGT--CAGGAGGTA 5'& . .|||| | |||||||| &5' -------TGGCCTTGGCCCTGTCCTCCA- 3'
Dmwdmmu-miR-1956beg:404end:424pic:3' AGGCGACTGAGTCGGGACCTGA 5'& ||| .|| .|| |||||||| &5' TCC-TTG-TTC--CCCTGGAC- 3'
Dmwdmmu-miR-1962beg:6end:29pic:3' TACACAGGGT-CAC-GGTCGGAGA 5'& ||||||| || ||.||||| &5' ---TGTCCCATGTTCCCGGCCTC- 3'
Dmwdmmu-miR-1971beg:330end:351pic:3' AGAGT-CGGGTCGGAAATG 5'& ||| ||||| || || &5' -CTCCTGCCCAAACTCCAC 3'
Dmwdmmu-miR-203starbeg:44end:66pic:3' ACAACTTGAC---AGTTCTTGGTGA 5'& .||| |||||||.|||| &5' ------GCTGACCTCAAGAATCACT 3'
Dmwdmmu-miR-2135beg:407end:428pic:3' CAAAGCC-GGGGTTCTGGAGA 5'& |.| |||| .||||||| &5' ---TTGTTCCCCTGGACCTCT 3'
Dmwdmmu-miR-217beg:143end:165pic:3' AGGTCAGTCAAGGACTACGTCAT 5'& |||| || ||||.|||. &5' -CCAGCCATGGG--GATGTAGTG 3'
Dmwdmmu-miR-218beg:198end:210pic:3' TGTACCAATCTAGTTCGTGTT 5'& ||||.|||| &5' ------------CAAGTACAA 3'
Dmwdmmu-miR-22starbeg:79end:98pic:3' ATTTCGAACGGTGA---CTTCTTGA 5'& .||. ||||.||| &5' ---------TCATGATGGAAGGACT 3'
Dmwdmmu-miR-296-3pbeg:20end:44pic:3' CCTCTCGGAGG--TGG-GTTGGGAG 5'& .|||||| .|| .||||||| &5' ----GGCCTCCTAGCCATAACCCTC 3'
Dmwdmmu-miR-30dbeg:437end:452pic:3' GAAGGTCAGCCCCTACAAATGT 5'& |||| |||||.| &5' -----AGTCCT---TGTTTGC- 3'
Dmwdmmu-miR-30ebeg:437end:452pic:3' GAAGGTCAGTTCCTACAAATGT 5'& |||| |||||.| &5' -----AGTCCT---TGTTTGC- 3'
Dmwdmmu-miR-324-5pbeg:140end:161pic:3' TGTGGTTACGGGATCCCCTACGC 5'& .|| ||| |||||||. &5' --GCCCA-GCCAT-GGGGATGT- 3'
Dmwdmmu-miR-325starbeg:114end:140pic:3' TGTGAATGACTCGTGGATGATCC 5'& |||| |||||.| ..| ||||| &5' ACACATACTGGGGGTCCCCTAGG 3'
Dmwdmmu-miR-339-5pbeg:298end:317pic:3' GCACTCGAGGACCTCCTGTCCCT 5'& ||.|. ||||.||||| &5' --TGGGTGA---GAGGGCAGGG- 3'
Dmwdmmu-miR-342-5pbeg:280end:302pic:3' GAGTTA-GTGTCTATCGTGGGGA 5'& ||.|. ||| ||.|||||| &5' CTTAGCCCAC----AGTACCCCT 3'
Dmwdmmu-miR-433beg:65end:88pic:3' TGTGGCTCCTC-GGGTAGTACTA 5'& .|. | || |. |||||||| &5' -TATTAACAAGACTAATCATGAT 3'
Dmwdmmu-miR-450b-3pbeg:1end:25pic:3' TACGTACGTTTTACAAGGGTTA 5'& .|| |||. ||||||||.. &5' GTGGATGTCCCATGTTCCCGG- 3'
Dmwdmmu-miR-466c-5pbeg:107end:125pic:3' ATACATGT-ACGTGTGTGTGTAG 5'& ||. ||||||||.|| &5' -----ACGCTGCACACATAC--- 3'
Dmwdmmu-miR-466f-5pbeg:106end:125pic:3' GTACGTGT-ACGTGTGTGTGCAT 5'& |||. ||||||||.|| &5' ----CACGCTGCACACATAC--- 3'
Dmwdmmu-miR-470beg:38end:61pic:3' TGAGTGGTCAC-GGTCAGGTTCTT 5'& ||| ||. || || .|||||| &5' -CTCCCCGCTGACC---TCAAGAA 3'
Dmwdmmu-miR-485beg:11end:29pic:3' CTTAAGTAGTGCC--GGTCGGAGA 5'& ||.| ||.||||| &5' --------CATGTTCCCGGCCTC- 3'
Dmwdmmu-miR-511beg:299end:320pic:3' ACTCACG-TCTCGTTTTCCGTA 5'& |.||| ||.||| .|||| &5' -GGGTGAGAGGGCA--GGGCA- 3'
Dmwdmmu-miR-669ebeg:60end:79pic:3' TACTTGTACGTGTGTGTTCTGT 5'& || ||.|. ||||||| &5' ----AC-TGTATTAACAAGAC- 3'
Dmwdmmu-miR-671-3pbeg:386end:406pic:3' CCACC-TCGGGACTCTTGGCCT 5'& ||| |||||||||..|| &5' --TGGAAGCCCTGAGGGCC--- 3'
Dmwdmmu-miR-672beg:8end:29pic:3' AGTGTGTGTCATGTGGTTGGAGT 5'& || | ||. || | ||..|||| &5' TC-C-CAT-GTTC-CCGGCCTC- 3'
Dmwdmmu-miR-673-3pbeg:400end:423pic:3' CCACGTGTCTTGAGTCGGGGCCT 5'& || || | |||.||| &5' GG-GCCCTCCTTGTTCCCCTGGA 3'
Dmwdmmu-miR-673-5pbeg:349end:370pic:3' GAGGTTCCTGGTCTC-GACACTC 5'& || .|.| .| |||||| &5' --CCTT--GCTATGGTCTGTGA- 3'
Dmwdmmu-miR-697beg:141end:161pic:3' AGAGGTGTCC-TGGTCCTACAA 5'& || ||| |. .|||||| &5' ---CC-CAGCCATGGGGATGT- 3'
Dmwdmmu-miR-705beg:335end:359pic:3' ACGGG--TGGGGTGGAGGGTGG 5'& |||| ||.||||| |. |. &5' -GCCCAAACTCCACCCCTTGCT 3'
Dmwdmmu-miR-713beg:218end:236pic:3' CGACACACGGAAGTCACGT 5'& ||| | ||||||. &5' -CTGAAA--CATCAGTGT- 3'
Dmwdmmu-miR-874beg:300end:320pic:3' AGCCAGGGAGCCCGGTCCCGTC 5'& ||| ||| |||||||| &5' --GGTGAGA-GGG-CAGGGCAG 3'
Dmwdmmu-miR-491beg:316end:335pic:3' GGAGTACCTTCCCA--AGGGGTGA 5'& | |.||| |||||||| &5' ------GCAGGGGCCATCCCCACT 3'
Dmwdmcmv-miR-m21-1beg:122end:138pic:3' GCCGAACTTGCACAGGGGATA 5'& ||.. | |||||||| &5' -----TGGG-G-GTCCCCTA- 3'
Dmwdmmu-miR-466hbeg:106end:122pic:3' ATGTGTGTTCGTGTACGTGTGT 5'& |||.| |||||||| &5' --CACGC-------TGCACACA 3'
DNA & RNA Element - miRNAMap
Gene NameMature miRNATarget StartTarget EndmiRNA 3-5AlignmentTarget 5-3
Dmwd; Dm9mmu-let-7b3058-UUGGUGUGUUGGA----UGA-UGGAGU- |:|||:| ||| :|| ||||||UAGCCAUAAC-CCUCCCCGCUGACCUCAA
Dmwd; Dm9mmu-let-7c3058-UUGGUAUGUUGGA----UGA-UGGAGU- |:||||| ||| :|| ||||||UAGCCAUAAC-CCUCCCCGCUGACCUCAA
Dmwd; Dm9mmu-let-7e2858UGAUA--UGUU-GGAGGA-----UGGAGU- ||| |:|| ||||| ||||||CCUAGCCAUAACCCUCCCCGCUGACCUCAA
Dmwd; Dm9mmu-miR-122a316338-UGUUUGUGGUAACAGUGUGAGGU :||:: :|||| | ||||||GGCAGGGGCCAUCC-C-CACUCCU
Dmwd; Dm9mmu-miR-124a158181CCGUA--AGUGGCGCAC-GGAAU- |:| || |:|:||| ||||:UGUAGUGUC-CUGUGUGGCCUUGG
Dmwd; Dm9mmu-miR-125a301325GUGUCCAAUUUCCCAGA--GUCCCU- :||| |:|||| |||||:--UGGGUGAGAGGGCAGGGCAGGGGC
Dmwd; Dm9mmu-miR-129-3p300315UACGAAAAACCC-CAUUCCCGAA |||| | :|||||-------CUGGGUGAGAGGGCA-
Dmwd; Dm9mmu-miR-133a290328-UGUCG-----ACCAACU-----------UCCCCUGGUU ||||: ||| ||| ||||| |||CACAGUACCCCUGGGUGAGAGGGCAGGGCAGGGG-CCAU
Dmwd; Dm9mmu-miR-133b310328AUCGACCAACUUCCCCUGGUU :|| || ||||| |||GGGCAGGGC--AGGGG-CCAU
Dmwd; Dm9mmu-miR-134131154-GGGGAGACCAGUU-GGUCAGUGU ||||| |||::: |||| ||:UCCCCUA-GGUUGGCCCAGCCAUG
Dmwd; Dm9mmu-miR-135b149178GUGUAUCCUUACUUU----------UCGGUAU |||:||:||| |: :|||-CCAUGGGGAUGUAGUGUCCUGUGUGGCCU--
Dmwd; Dm9mmu-miR-140*164188-AGG---CACCAAGA-UGGGACACCAU ||| |||| :||||||GUCCUGUGUGGCCUUGGCCCUGUC---
Dmwd; Dm9mmu-miR-141212239-GGU--AGAAAUG--GUCUGUCACAAU- || ||| |: || ||||||||ACCUGUUCUCUGAAACAU-CAGUGUUAA
Dmwd; Dm9mmu-miR-149301328CCUCACU--UCUGUG----CCUCGGUCU |:|||| :|:|| ||:||||UGGGUGAGAGGGCAGGGCAGGGGCCAU-
Dmwd; Dm9mmu-miR-17-3p104119AUGUUCACGGGA-GUGACGUCA |||| |:|||||------AGCCCCACGCUGCAC-
Dmwd; Dm9mmu-miR-181d191220UUGGGUGGCUGU---UGUUACUU-ACAA- ||||||:| || ||||||| ||||CACCCACUGCCAAGUACAAUGACCUGUUC
Dmwd; Dm9mmu-miR-193123150-GACCCU-----GAAACAUCCGG-UCAA |||||: || || |||| ||ACUGGGGGUCCCCUAGGUUGGCCCAGC-
Dmwd; Dm9mmu-miR-200a214239UGUAGCAAUGGUCU-----GUCACAAU- :||| :| || ||||||||---CUGUUCUCUGAAACAUCAGUGUUAA
Dmwd; Dm9mmu-miR-207301326CUCCCUC-CUCUCGGUCC-UCUUCG- ||| | |||:|| :|| || ||-UGGGUGAGAGGGCAGGGCAGGGGCC
Dmwd; Dm9mmu-miR-212254286CCG-GCACUGAC-------------CUCUGACAAU || :||||||| ||||||AGCAUGUGACUGUUCACUCCUGGGAGAGACUU---
Dmwd; Dm9mmu-miR-217129166-UAGG----UCAGUCAA---GGA----CUACGUCAU- :||| :||::| || ||||:|||:GGUCCCCUAGGUUGGCCCAGCCAUGGGGAUGUAGUGU
Dmwd; Dm9mmu-miR-221141165UUUGGGUCGU--CUGUUACAUCGA ::|||||| |: :||||||:UGGCCCAGCCAUGGGGAUGUAGUG
Dmwd; Dm9mmu-miR-222141165CUCUGGGUCAUCGG----UCUACAUCGA |:||| |||| :|||||||:-UGGCCC---AGCCAUGGGGAUGUAGUG
Dmwd; Dm9mmu-miR-23b242264CCAUUAGGGAC-----CGUUACACUA ||||||| ||| |||||---UAUCCCUGUCCCAGCA-UGUGAC
Dmwd; Dm9mmu-miR-24262291-GACAAG-GACGACU-----UGACUCGGU |||||| || |||: ||| ||||ACUGUUCACUCCUGGGAGAGACUUAGCCC
Dmwd; Dm9mmu-miR-292-3p97120UGUGAGUUUUGGAC--CGCCGUGAA :||| ||:|| || ||||-UGCUCCAAGCCCCACGCUGCACA-
Dmwd; Dm9mmu-miR-296299327UGUCCUAA-CUCCC-------CCCCGGGA | ||:| ||||| ||||||CCUGGGUGAGAGGGCAGGGCAGGGGCCA-
Dmwd; Dm9mmu-miR-297108126GUACGUGU-ACGUGUGUAUGUA |||: |||||||||||---CCACGCUGCACACAUACU-
Dmwd; Dm9mmu-miR-297b113126UGUACAAGUACGUGUGUAUGUA |||||||||||--------CUGCACACAUACU-
Dmwd; Dm9mmu-miR-298389418-CCUUC----UUGUCGGGAGGAGAC-GG- ||||| :| :||||||||: ||UGGAAGCCCUGAGGGCCCUCCUUGUUCCC
Dmwd; Dm9mmu-miR-302b7699GAUGAUU--UUGUACCUUCGUGAA ||||| | ||||||| |||-GACUAAUCAUGAUGGAAGGACUG
Dmwd; Dm9mmu-miR-302d7699UGUGAGU--UUGUACCUUCGUGAA ||| | ||||||| |||-GACUAAUCAUGAUGGAAGGACUG
Dmwd; Dm9mmu-miR-30a-3p111132-CGACGUUUGUAGGCUGACUUUC- |||||| |||| |||| :|CGCUGCACACAU---ACUGGGGGU
Dmwd; Dm9mmu-miR-324-3p288324-GGUCGUCGUGG--AC-------CCCGUCA----CC- ||| |||:||| || |||||| ||CCCA-CAGUACCCCUGGGUGAGAGGGCAGGGCAGGGG
Dmwd; Dm9mmu-miR-324-5p142162GUGGUUACGGGAUCCCCUACGC :|| ||| |||||||:GGCCCA-GCCAU-GGGGAUGUA
Dmwd; Dm9mmu-miR-325116141-UGUGAAUGACUCGU-GGAUGAUCC- |||| |||||:| : || |||||CACACAUACUGGGGGUCCC-CUAGGU
Dmwd; Dm9mmu-miR-326122157-UGACCUCCU-----UC---CCGGGUC----UCC- |||||:|| || ||||||| :||UACUGGGGGUCCCCUAGGUUGGCCCAGCCAUGGGG
Dmwd; Dm9mmu-miR-328300328UGCCU----UCCCGUCUC--UCCCGGUC :||: |||||||:| :||||||CUGGGUGAGAGGGCAGGGCAGGGGCCAU
Dmwd; Dm9mmu-miR-33194215-GUUACG-UUGAUGUUACGUG- || ||| || ||||||| ||CCACUGCCAAGUACAAUG-ACC
Dmwd; Dm9mmu-miR-331299326AAGAUCCUA---UCCGG---GUCCCCG- ||:|| :||| |||||||-CCUGGGUGAGAGGGCAGGGCAGGGGCC
Dmwd; Dm9mmu-miR-339300325-ACUCGAGGA-CC-UCCUGUCCCU- ||:|: || |||:|||||:CUGGGUGAGAGGGCAGGGCAGGGGC
Dmwd; Dm9mmu-miR-342150176CUGCCC--ACGCUAAA-GACACACUCU |:||| ||: :| |||||||:CAUGGGGAUGUAGUGUCCUGUGUGGC-
Dmwd; Dm9mmu-miR-345114146-CGUGACC-UGAUCCCCAG---------UCGU |||| |||:|||||| :||UGCACACAUACUGGGGGUCCCCUAGGUUGGCC
Dmwd; Dm9mmu-miR-346306326-UCU-CCGUCCGUGAGCCCGUCUGU ||| |||||| :| ||||GAGAGGGCAGG-GCAGGGGCC----
Dmwd; Dm9mmu-miR-351301325GUCCGAGUUUCCCGAGGAGUCCCU- :||: |:||||| |||||:UGGGUG-AGAGGGCAGGGCAGGGGC
Dmwd; Dm9mmu-miR-378289325UGUGUCCU--GGACC----------UCA-GUCCUC- ||||| ||||| || ||||:|CCACAGUACCCCUGGGUGAGAGGGCAGGGCAGGGGC
Dmwd; Dm9mmu-miR-380-5p214243CGCGUACAAGAUAC----------CAGUUGGU- |||||| || ||:|||||----CUGUUCUCUGAAACAUCAGUGUUAACCAU
Dmwd; Dm9mmu-miR-411151174UGACUCCCA-AUCACCUGGCACAA ||:|| ||||| |:||||-AUGGGGAUGUAGUGUCCUGUGUG
Dmwd; Dm9mmu-miR-422b172190-CCGGAAGACUGAGGUUCAGGUC ||||| ||:| || ||||UGGCCU--UGGC-CCU-GUCCU-
Dmwd; Dm9mmu-miR-4494369UGGUCGAUUGUUAU-----GUGACGGU || |||:|| |||||:CCCCGCUGACCUCAAGAAUCACUGUA-
Dmwd; Dm9mmu-miR-450b*326-UACGUACGUUUUACAAGGGUUA :|| |||: ||||||||::UGUGGAUGUCCCAUGUUCCCGGC
Dmwd; Dm9mmu-miR-465-3p166189AGAUGAAUCUUU-CCGGGACUAG- ||: |:| ||||||| ||CCUGUGUGGCCUUGGCCCUG-UCC
Dmwd; Dm9mmu-miR-483305325UGUUCUGCCC-UCCCCUCCUCACU :||| ||| |||| |||:|-UGAGA-GGGCAGGGCAGGGGC--
Dmwd; Dm9mmu-miR-485-3p152177CUCUCCU----CUCGGCACAUACUGA |:||| | |:| |||:||:|-UGGGGAUGUAGUGUCCUGUGUGGCC
Dmwd; Dm9mmu-miR-485-5p530-CUUAAGUAGUGCC--GGUCGGAGA |:|| ||:| ||:|||||UGGAUGUCCCAUGUUCCCGGCCUCC
Dmwd; Dm9mmu-miR-489147168CGACGGUAUA--UACACCACAGUAA |||||: |||| |||||--AGCCAUGGGGAUGUAGUGUCC--
Dmwd; Dm9mmu-miR-490114144GUCGUA--------CCUCAGGAGGUCCAAC- ||| ||:|||| |:||||||-UGCACACAUACUGGGGGUCCCCUAGGUUGG
Dmwd; Dm9mmu-miR-491312336GGAGUACCUUCCCA---AGGGGUGA- || || |||| ||||||||--GCAGGGCAGGGGCCAUCCCCACUC
Dmwd; Dm9mmu-miR-50391118CGUCAUGACAAGG--------GCGACGAU || |||| ||| ||||||-AAGGACUGCUCCAAGCCCCACGCUGCA-
Dmwd; Dm9mmu-miR-540236-GGUCCUA------------GCUGGAGAC-UGGA : |||| ||:|||| :||AUGUGGAUGUCCCAUGUUCCCGGCCUCCUAGCCA
Dmwd; Dm9mmu-miR-541209250ACACUGG----------UUGUAGUCU---------UAGGGAA ||||| |||||||| ||||||-AUGACCUGUUCUCUGAAACAUCAGUGUUAACCAUAUCCCUG
Dmwd; Dm9mmu-miR-542-5p365403GCACUGU-ACU-------------ACUA--GGGGCUC- ||||: ||| ||: |||:|||UGUGAUUUUGAAAGUGUUAAAUUAUGGAAGCCCUGAGG
Dmwd; Dm9mmu-miR-551b121157-GUGACUUU-----GGUUCA----------UACCCAGC :|||| : |:|:|| |||||AUACUGGGGGUCCCCUAGGUUGGCCCAGCCAUGGGG--
Dmwd; Dm9mmu-miR-652113154-ACGUGUU------------GGGAUC--ACCG---CGGUAA |||||| |||||| |||| |||||CUGCACACAUACUGGGGGUCCCCUAGGUUGGCCCAGCCAUG
Dmwd; Dm9mmu-miR-665397423-AUUCCCUGGAGUC----GGAGGACCA |:|||| |||| || |||||CUGAGGGCCCUCCUUGUUCC-CCUGGA
Dmwd; Dm9mmu-miR-6662251-CCGAGAGUGUCGACAC------GGGCGA- ||| ||| :||| ||||||CGGC-CUCCUAGCCAUAACCCUCCCCGCUG
Dmwd; Dm9mmu-miR-667300328GAACCCGA---CCCA--CCGUCCACAGU- ||||: ||| |||||| | ||-CUGGGUGAGAGGGCAGGGCAGGGGCCAU
Dmwd; Dm9mmu-miR-669a82127UGUACUUGU------ACG---------------UGUGUGU UGA ||||| : ||| :|||||| |||UCAUGAUGGAAGGACUGCUCCAAGCCCCACGCUGCACACAUACUG
Dmwd; Dm9mmu-miR-675-5p166196UGACAC-------CCGGGAAAGGC-GUGGU ||||| |||||| ||| ||||CCUGUGUGGCCUUGGCCCUGUCCUCCACCC
Dmwd; Dm9mmu-miR-676*127158CGUUCAGGAU-UCCAAC---------AUCUCA ::|||| |||||| |:|:|-GGGGUCCCCUAGGUUGGCCCAGCCAUGGGGA
Dmwd; Dm9mmu-miR-680296327-GGGGGUACAGU---------CGUCUACGGG ||||: || | |||| |||ACCCCUGGGUGAGAGGGCAGGGCAGGGGCCA
Dmwd; Dm9mmu-miR-68274101GUCUGA--AGUG--ACA---CUGACGUC ||||| |||: || ||||||AAGACUAAUCAUGAUGGAAGGACUGCU-
Dmwd; Dm9mmu-miR-685137159CACGGAGUGGAGUCGGUAA--CU- | :| :|| ||||||| ||-AGGUUGGCC-CAGCCAUGGGGAU
Dmwd; Dm9mmu-miR-688158173CUUAUUCAUCAGCGGACGCU ||||| ||||:|-----UGUAGUGUCCUGUGU
Dmwd; Dm9mmu-miR-689128161-CCUGGGG-------CGGCUCG---CCCCUGC- || |||| ||| ||| |||||:|GGGUCCCCUAGGUUGGCCCAGCCAUGGGGAUGU
Dmwd; Dm9mmu-miR-690151184AAACCA--------------ACACUCGGA-UCGGAAA ||| |||| |||| :|||-AUGGGGAUGUAGUGUCCUGUGUG-GCCUUGGCCC--
Dmwd; Dm9mmu-miR-695128150AAGUCAGUGGAUA----CGGGUUAGA :||| |||| |||||:--GGGUCCCCUAGGUUGGCCCAGC--
Dmwd; Dm9mmu-miR-696106122-GGGUGUCGUUCGUGUGCG ||||| || ||||||CCCCAC-GCU-GCACACA-
Dmwd; Dm9mmu-miR-699178203GCUCGGUCCAGC------GUGACGGA :||| ||| |||||||-UGGCCCUGUCCUCCACCCACUGCCA
Dmwd; Dm9mmu-miR-700152175-CCACCUGAGCCA-AGGGCGCAC- || |||: |||:|:|||UGG-GGAUGUAGUGUCCUGUGUGG
Dmwd; Dm9mmu-miR-702301321CUCGCCCCA-UUUCCCA-CCCGU- |||| |:|||| |||||----UGGGUGAGAGGGCAGGGCAG
Dmwd; Dm9mmu-miR-705336359-ACGGG--UGGGGUGGAGGGUGG- ||||| ||:||||| ||: |CUGCCCAAACUCCACC-CCUUGCU
Dmwd; Dm9mmu-miR-709174193AGGAGGACGGAGAC-GGAGG- |||: ||| ||| |||||GCCUUG-GCC-CUGUCCUCCA
Dmwd; Dm9mmu-miR-712293314CCAUGGCGGGCCCACU-UCCUC ||||| ||:|||||| |||:AGUACC-CCUGGGUGAGAGGGC
Dmwd; Dm9mmu-miR-714167189CGCUGGCUGG--CCGGGAGCAGC :| :|:|| |||||| |||CUGUGUGGCCUUGGCCCU-GUCC
Dmwd; Dm9mmu-miR-744166188CGACA-AUCGGGAUCGGGGCGU |||| |:|||:|:||||:|:CCUGUGUGGCCUUGGCCCUGUC
Dmwd; Dm9mmu-miR-762158186-CGAGACAGGG----CCGGGGUCGGGG- |: |||||: ||||:::||||:UGUAGUGUCCUGUGUGGCCUUGGCCCUG
Dmwd; Dm9mmu-miR-763121145CGGUGACCAAGAAGGG---UCGACC- :||||| |||| :|:|||-AUACUGGGGG-UCCCCUAGGUUGGC
Dmwd; Dm9mmu-miR-764-3p159186UGUCAACGGUGAUACCGGA----GGA- :||| || |:|||||| |||GUAGUGUCCUGUGUGGCCUUGGCCCUG
Dmwd; Dm9mmu-miR-770-3p144182-GGUCG---------------AGGUGCAGUCCGGGUGC- ||||| ||| :|| ||||: |CCCAGCCAUGGGGAUGUAGUGUCC-UGUGUGGCCUUGGC
Dmwd; Dm9mmu-miR-132261268----------------------GCUGGUACCG-ACAUCUGACAAU :| || || ||| |||||||ACAUCAGUGUUAACCAUAUCCCUGUCCCA-GCAUGU-GACUGUUC
Dmwd; Dm9mmu-miR-141230237------------------GGU--AGAAAUG--GUCUGUCACAAU || ||| |: || ||||||||CACUGCCAAGUACAAUGACCUGUUCUCUGAAACAU-CAGUGUUAA
Dmwd; Dm9mmu-miR-200a230237UGUAGCAAUGGUCU-------------------------GUCACAAU |:||| ||||||||CAC----UGCCAAGUACAAUGACCUGUUCUCUGAAACAUCAGUGUUAA
Dmwd; Dm9mmu-miR-212261268C----------------------CGGCACUG-ACCUCUGACAAU |:| :| || |||||||ACAUCAGUGUUAACCAUAUCCCUGUCCCAGCAUGU-GACUGUUC
Dmwd; Dm9mmu-miR-34a195202U----------UGUUGG--UCGAUUCU--------GUGACGGU : :|| :|| | ||||||||UAGUGUCCUGUGUGGCCUUGGCCCUGUCCUCCACCCACUGCCAA
Dmwd; Dm9mmu-miR-433-3p8188U---------------GUGGCUCC-----UC-GGGUAGUACUA |||:| || |: ||||||||CGCUGACCUCAAGAAUCACUGUAUUAACAAGACUAAUCAUGAUG
Dmwd; Dm9mmu-miR-449195202--------------------UGGU-CGAUUGUUAUGUGACGGU :|| |: | | ||||||||UAGUGUCCUGUGUGGCCUUGGCCCUGUCCUCCACCCACUGCCAA
Dmwd; Dm9mmu-miR-491327334-------GGAGUA-----------CCUUCCCA---AGGGGUGA ||| : || |||| ||||||||CAGUACCCCUGGGUGAGAGGGCAGGGCAGGGGCCAUCCCCACUC
Dmwd; Dm9mmu-miR-665270277AUUCC---------CUGGAGUCG-------------GAGGACCA | || |||| |||||||UUAACCAUAUCCCUGUCC-CAGCAUGUGACUGUUCACUCCUGGG
Dmwd; Dm9mmu-miR-699195202GC-----------------UCGGUCCAGC------GUGACGGA :||| ||| |||||||UAGUGUCCUGUGUGGCCUUGGCCCUGUCCUCCACCCACUGCCA
Dmwd; Dm9mmu-let-7b3156UUGGUGU---GUUGGAUGA-UGGAGU|:|||:| | || :|| ||||||AGCCATAACCCTCCCCGCTGACCTCA
Dmwd; Dm9mmu-let-7c3156UUGGUAU---GUUGGAUGA-UGGAGU|:||||| | || :|| ||||||AGCCATAACCCTCCCCGCTGACCTCA
Dmwd; Dm9mmu-let-7e3256uGAUAUGUUGGAG----GA-UGGAGU | ||| | |||| || ||||||gCCATA-ACCCTCCCCGCTGACCTCA
Dmwd; Dm9mmu-miR-122a317337uGUUUGUGGUAACAGUGUGAGGu ||:: :|||| | ||||||gCAGGGGCCAT--CCCCACTCCt
Dmwd; Dm9mmu-miR-125a299318GUGUCCAAUUUCCCAGAGUCCCu| ::||| |:|||| |||||CCTGGGTGAGAGGG---CAGGGc
Dmwd; Dm9mmu-miR-129-3p293315uacgaaaaACCC-CAUUCCCGaa |||| | :|||||agtaccccTGGGTGAGAGGGCag
Dmwd; Dm9mmu-miR-132249268gcuGGUACCG-ACAUCUGACAAu ||| || ||| |||||||gtcCCA--GCATGT-GACTGTTc
Dmwd; Dm9mmu-miR-133a296327UGUCGACCAACU------UC----CCCUGGUu|| |||| ||| || |||:|||ACCCCTGGGTGAGAGGGCAGGGCAGGGGCCAt
Dmwd; Dm9mmu-miR-133b297327aucGACCAACU------UC----CCCUGGUu |||| ||| || |||:|||cccCTGGGTGAGAGGGCAGGGCAGGGGCCAt
Dmwd; Dm9mmu-miR-134132153GGGGAGACCAGUU-GGUCAGUgu||||| |||::: |||| ||CCCCT-AGGTTGGCCCAGCCAtg
Dmwd; Dm9mmu-miR-135b132153GUGUAUCCUUACUUUUCGGUAu| | |||| | ||||||CCCCTAGGTTGGCCCAGCCATg
Dmwd; Dm9mmu-miR-140*148174aGGCAC-----CAAGAUGGGACACcau || || || |::||||||gCCATGGGGATGTAGTGTCCTGTGtgg
Dmwd; Dm9mmu-miR-149303328CCUCACUUCUGU---G-CCUCGGUcu|| | ||:|:|| | ||:||||GGTGAGAGGGCAGGGCAGGGGCCAtc
Dmwd; Dm9mmu-miR-17-3p100119AUGUUCACGGGAGUGACGUca| |||| ||| |:|||||TCCAAG-CCCCACGCTGCAca
Dmwd; Dm9mmu-miR-193124150GACCCU-----GAAACAUCC-GGUCaa|||||: || || || ||||CTGGGGGTCCCCTAGGTTGGCCCAGcc
Dmwd; Dm9mmu-miR-207300324cuCCCUC-CUCUCGGUCC-UCUUCG ||| | |||:|| :|| ||::||ctGGGTGAGAGGGCAGGGCAGGGGC
Dmwd; Dm9mmu-miR-217143164uaGGUCAGUCAAGGACUACGUCAu |||| || | ||||:|||gcCCAGCCA--TGGGGATGTAGTg
Dmwd; Dm9mmu-miR-222140164cuCUGGGUCAUCGGU----CUACAUCga |:||| ||||| |||||||ttGGCCC---AGCCATGGGGATGTAGtg
Dmwd; Dm9mmu-miR-23b239263ccauUAGGGACCG----UUACACUa ||||||| | ||||||ccatATCCCTGTCCCAGCATGTGAc
Dmwd; Dm9mmu-miR-24263290GACAAG-GACGAC-----UUGACUCGGu|||||| || ||| :||| ||||CTGTTCACTCCTGGGAGAGACTTAGCCc
Dmwd; Dm9mmu-miR-292-3p95120UG-UGAGUUUU--GGACCGCCGUGaa|| :||| ||: || || ||||ACTGCTCCAAGCCCCACGCTGCACac
Dmwd; Dm9mmu-miR-296307327UGUCCUAACUCCCCCCCGGga| |||: |:| ||||||AGAGGGCAGGGCAGGGGCCat
Dmwd; Dm9mmu-miR-297102126GUAC---GUGU-ACGUGUGUAUGua|| | |||: |||||||||||CAAGCCCCACGCTGCACACATACtg
Dmwd; Dm9mmu-miR-297b108126uGUACAAGUACGUGUGUAUGua || | | |||||||||||cCACG--C-TGCACACATACtg
Dmwd; Dm9mmu-miR-298390422CCUUC----UUGUCGGG-------AGGAGACgg||||| :| :|||| ||| |||GGAAGCCCTGAGGGCCCTCCTTGTTCCCCTGga
Dmwd; Dm9mmu-miR-302b7598gaUGAUU--UUGUACCUUCGUGAa ||||| | ||||||| |||agACTAATCATGATGGAAGGACTg
Dmwd; Dm9mmu-miR-302d7598UGUGAGUUUG---UACCUUCGUGAa| ||| || | ||||||| |||AGACT-AATCATGATGGAAGGACTg
Dmwd; Dm9mmu-miR-30a-3p112130CGACGUUUGUAGGCUGACUUUC|||||| |||| ||||:::|GCTGCACACAT---ACTGGGGG
Dmwd; Dm9mmu-miR-324-3p289318GGUCGUCGUGG------AC---CCCGUCACc||| |||:||| || |||||| |CCA-CAGTACCCCTGGGTGAGAGGGCAGGGc
Dmwd; Dm9mmu-miR-324-5p143161guGGUUACGGGAUCCCCUACgc ||| ||| | |||||||gcCCA--GCCAT-GGGGATGta
Dmwd; Dm9mmu-miR-325117139UGUGAAUGACUCGUGGAUGAUCC|||| |||||:| ::| |||||ACACATACTGGGGGTCCCCTAGG
Dmwd; Dm9mmu-miR-326123151UGACCUCC------UUC--CCGGGUCucc|||||:|| |:| |||||||ACTGGGGGTCCCCTAGGTTGGCCCAGcca
Dmwd; Dm9mmu-miR-328304327ugCCUUCCCGUCUC--UCCCGGUc | :|||||||:| :||||||gtGAGAGGGCAGGGCAGGGGCCAt
Dmwd; Dm9mmu-miR-33195214GUUAC-GUUGAUGUUACgug|| || ||| |||||||CACTGCCAAGTACAATGacc
Dmwd; Dm9mmu-miR-331305324aagaUCCUAUCCGGGUCCCCG |||: ||| |||||||tgagAGGGCAGG-GCAGGGGC
Dmwd; Dm9mmu-miR-339293318acucGAGGAC-----CUCCUGUCCCu | |||| ||||:|||||agtaCCCCTGGGTGAGAGGGCAGGGc
Dmwd; Dm9mmu-miR-342150176cUGCCC--ACGCUA-AAGACACACucu |:||| ||: :| | |||||||cATGGGGATGTAGTGTCCTGTGTGgcc
Dmwd; Dm9mmu-miR-345121145cgUGACCU------GAUCCCCAGUCGu |||||: ||| |||::||atACTGGGGGTCCCCTA--GGTTGGCc
Dmwd; Dm9mmu-miR-346307323UCUCCGUCCGUGAGCCCGUCugu|||| |||| ||||||AGAG---GGCA---GGGCAGggg
Dmwd; Dm9mmu-miR-34a185202uuguuGGUCGAUUCUGUGACGGU ||| | ||||||||gtcctCCACC-----CACTGCCA
Dmwd; Dm9mmu-miR-351300323GUCCGAGUUUCCCGAGGAGUCCCu| || | |:||||| |||||CTGGGTGAGAGGGCAGGGCAGGGg
Dmwd; Dm9mmu-miR-380-5p210241cgcGUACAAGAUAC----------CAGUUGGU | |||||| || ||:|||||tgaCCTGTTCTCTGAAACATCAGTGTTAACCA
Dmwd; Dm9mmu-miR-411150173ugACUCCCA-AUCACCUGGCACAa ||:|| | ||||| |:||||caTGGGGATGTAGTGTCCTGTGTg
Dmwd; Dm9mmu-miR-422b173209CCGGAA----GAC----------UGA-GGUUCAGGUc|||||| ||| ||| |||||| ||GGCCTTGGCCCTGTCCTCCACCCACTGCCAAGTACAa
Dmwd; Dm9mmu-miR-433-3p6188uGUGGC-----UCCUC-GGGUAGUACUA |||:| | || |: ||||||||tCACTGTATTAACAAGACTAATCATGAT
Dmwd; Dm9mmu-miR-449181202uGGUCGAUUGUUAUGUGACGGU || |: | | ||||||||cCCTGTCCTCCACCCACTGCCA
Dmwd; Dm9mmu-miR-4494369uGGUCGAUU---GUUAU--GUGACggu || |||:| ||| | |||||cCCCGCTGACCTCAAGAATCACTGtat
Dmwd; Dm9mmu-miR-450b*425uACGUACGUUUUACAAGGGuua || |||: ||||||||gTGGATGTCCCATGTTCCCggc
Dmwd; Dm9mmu-miR-465-3p167188agaugaaucuuuCCGGGACuag |||||||ctgtgtggccttGGCCCTGtcc
Dmwd; Dm9mmu-miR-483304326uguUCUGCCCUCCCCUCCUCacu ||| || |||| |||:|gtgAGAGGGCAGGGCAGGGGcca
Dmwd; Dm9mmu-miR-485-3p154176CUCU-CCUCUCGGCACAUACUGa|:|| | || |:| |||:||:|GGGATGTAGTGTCCTGTGTGGCc
Dmwd; Dm9mmu-miR-485-5p629CUUAAGUAGUGC--CGGUCGGAGa|:|| : ||:| ||:|||||GGATGTCCCATGTTCCCGGCCTCc
Dmwd; Dm9mmu-miR-489145169cGACGGUA--UAUACACCACAGUAa | ||||| : |||| ||||| |cCAGCCATGGGGATGTAGTGTCCTg
Dmwd; Dm9mmu-miR-490118142GUCGUA----CCUCAGGAGGUCCAAC|| ||| ||:|||| |:||||||CA-CATACTGGGGGTCCCCTAGGTTG
Dmwd; Dm9mmu-miR-491310334ggaGUACCUUCCC---AAGGGGUGA || || |||| ||||||||gggCAGGGCAGGGGCCATCCCCACT
Dmwd; Dm9mmu-miR-50390118CGUCAUGACAAGG--------GCGACGau| || |||| ||| ||||||GAAGGACTGCTCCAAGCCCCACGCTGCac
Dmwd; Dm9mmu-miR-5403354GGUCCUAG--CUGGAGACUGGA||| | | || |||||||CCATAACCCTCCCCGCTGACCT
Dmwd; Dm9mmu-miR-541220249ACACUGGUUGUAGUC---------UUAGGGAa| ||| |||||||| ||||||TCTGA--AACATCAGTGTTAACCATATCCCTg
Dmwd; Dm9mmu-miR-542-5p379401gCACUGUACUAC--UAGGGGCUC || | || ||| | |||:|||tGTTAAATTATGGAAGCCCTGAG
Dmwd; Dm9mmu-miR-551b111133GUGAC-UUUGGUUCAUACCCAGc|:||| | || | |: |||||CGCTGCACACATACTGGGGGTCc
Dmwd; Dm9mmu-miR-652126153acguguuGGGAUC--ACCG---CGGUAa |||||| |||| |||||gggggtcCCCTAGGTTGGCCCAGCCATg
Dmwd; Dm9mmu-miR-665256277aUUCCCUG--GAGUCGGAGGACCa | | ||| :||| |||||||cATGTGACTGTTCA--CTCCTGGg
Dmwd; Dm9mmu-miR-665398422AUUCCCUGGAG---UCGGAGGACCa|:|||| |||| : :| |||||TGAGGGCCCTCCTTGTTCCCCTGGa
Dmwd; Dm9mmu-miR-6662349CCGAGAGUGUCG--A----CACGGGCGA||| ||| :||| | | ||||||GGC-CTCCTAGCCATAACCCTCCCCGCT
Dmwd; Dm9mmu-miR-667299326GAACCCG---ACCC--ACCGUCCACAGU| ||||: ||| |||||| | ||CCTGGGTGAGAGGGCAGGGCAGGGGCCA
Dmwd; Dm9mmu-miR-669a102125uguacuuGUACG-UGUGUGU-UGA || || :|||||| |||caagcccCACGCTGCACACATACT
Dmwd; Dm9mmu-miR-676*144165cGUUCAGGAUUCCAACAUCUCA | || | |::|| ||||| ||cCCAGCCATGGGGATGTAGTGT
Dmwd; Dm9mmu-miR-680297326GGGGGUACA-------GU--CGUCUACGGg||||:: || || ||||: |||CCCCTGGGTGAGAGGGCAGGGCAGGGGCCa
Dmwd; Dm9mmu-miR-68274101gUCUGA--AGUG--AC---ACUGACGuc ||||| |||: || ||||||aAGACTAATCATGATGGAAGGACTGCtc
Dmwd; Dm9mmu-miR-685136155caCGGAGUGGAGUCGGUAACu | :| :|| ||||||| |taGGTTGGCC-CAGCCATGGg
Dmwd; Dm9mmu-miR-688153172CUUAUUCAUCAGCGGACGCu|:: | ||||| ||||:|GGGGATGTAGTGTCCTGTGt
Dmwd; Dm9mmu-miR-689141159cCUGGGGCGGCUCGCCCCUGC |:||| ||| | :|||||:|tGGCCCAGCC-A-TGGGGATG
Dmwd; Dm9mmu-miR-690152179aaaCCAACA-CUC-GG----AUCGGAAa || ||| | | || |:|||||tggGGATGTAGTGTCCTGTGTGGCCTTg
Dmwd; Dm9mmu-miR-695126151aaguCAGUGGAU---A-CGGGUUAGa ||| |||| | |||||: |ggggGTCCCCTAGGTTGGCCCAGCCa
Dmwd; Dm9mmu-miR-696107122GGGUGUCGUUCGUGUGcg||||| || ||||||CCCAC-GC-TGCACACat
Dmwd; Dm9mmu-miR-699177202gcuCGGUCCA------GCGUGACGGa ||| || | |||||||ttgGCCCTGTCCTCCACCCACTGCCa
Dmwd; Dm9mmu-miR-700153173CCACCUGAGCCA-AGGGCGCAC|| |||: : || |||:|:|||GG-GGATGTAGTGTCCTGTGTG
Dmwd; Dm9mmu-miR-702297319cucGCCCCA-UUUCCC-ACCCGU | |||| |:|||| |||||cccCTGGGTGAGAGGGCAGGGCA
Dmwd; Dm9mmu-miR-705322340aCGGGUGGGGUGGAGGGUGG ||| ||||| ||||::||gGCCATCCCCA-CTCCTGCC
Dmwd; Dm9mmu-miR-709186204AGGAGGACGGAGACGGagg|||||| || |||||TCCTCCACCCACTGCCaag
Dmwd; Dm9mmu-miR-714171188CGCUGGCUGGCCGGGAGCAGc|:|:|| ::|||||| |||GTGGCC--TTGGCCCT-GTCc
Dmwd; Dm9mmu-miR-762166189cGAGACA--GGGCCGGGGUCGGGg || ||| ||: | ||| |:||cCTGTGTGGCCTTGGCCCTGTCCt
Dmwd; Dm9mmu-miR-763131154cGGUGACCAAGAAGGGUCG--ACC || || | |: |||||| |||tCCCCTAGGTTGGCCCAGCCATGG
Dmwd; Dm9mmu-miR-764-3p168192uguCAACGG---UGAUACCGGAGGa || ||| :| || |||||tgtGTGGCCTTGGCCCTGTCCTCCa
Dmwd; Dm9mmu-miR-770-3p126149gguCGAGGUG--CAGUCCGGGUgc | ||| | | : ||||||gggGGTCCCCTAGGTTGGCCCAgc
Dmwd; Dm9mmu-miR-770-3p166186GGUCGAGGUGCAGUCCGGGugc|| |: : :| |: |||||CCTGTGTGGCCTT-GGCCCtgt
DNA & RNA Element - RAID2
Gene NameRAID IDInteractor 1Category 1ID 1Interactor 2Category 2ID 2MethodsScore
DmwdRAID00014496mmu-miR-431-5pmiRNAMIMAT0001418DmwdmRNA13401Prediction0.1828
DmwdRAID00027623mmu-miR-299a-3pmiRNAMIMAT0004577DmwdmRNA13401Prediction0.1828
DmwdRAID00037354mmu-miR-3078-3pmiRNAMIMAT0014865DmwdmRNA13401Prediction0.1828
DmwdRAID00131061mmu-miR-6912-5pmiRNAMIMAT0027724DmwdmRNA13401Prediction0.1828
DmwdRAID00151626mmu-miR-3572-5pmiRNAMIMAT0022986DmwdmRNA13401Prediction0.1828
DmwdRAID00198050mmu-miR-698-5pmiRNAMIMAT0022930DmwdmRNA13401Prediction0.1828
DmwdRAID00225434mmu-miR-212-3pmiRNAMIMAT0000659DmwdmRNA13401Prediction0.1828
DmwdRAID00473827mmu-miR-449c-5pmiRNAMIMAT0003460DmwdmRNA13401CLIP-seq//Prediction0.6559
DmwdRAID00586540mmu-miR-7064-3pmiRNAMIMAT0028033DmwdmRNA13401Prediction0.1828
DmwdRAID00765595mmu-miR-30a-5pmiRNAMIMAT0000128DmwdmRNA13401Prediction0.1828
DmwdRAID01023404mmu-miR-132-3pmiRNAMIMAT0000144DmwdmRNA13401Prediction0.1828
DmwdRAID01024565mmu-miR-30d-5pmiRNAMIMAT0000515DmwdmRNA13401Prediction0.1828
DmwdRAID01147034mmu-miR-128-3pmiRNAMIMAT0000140DmwdmRNA13401Prediction0.1828
DmwdRAID01394828mmu-miR-1982-3pmiRNAMIMAT0009460DmwdmRNA13401Prediction0.1828
DmwdRAID01469250mmu-miR-7035-5pmiRNAMIMAT0027974DmwdmRNA13401Prediction0.1828
DmwdRAID01510566mmu-miR-19a-3pmiRNAMIMAT0000651DmwdmRNA13401Prediction0.1828
DmwdRAID01560743mmu-miR-135b-5pmiRNAMIMAT0000612DmwdmRNA13401CLIP-seq0.5483
DmwdRAID01606864mmu-miR-6919-5pmiRNAMIMAT0027738DmwdmRNA13401Prediction0.1828
DmwdRAID01632376mmu-miR-200a-3pmiRNAMIMAT0000519DmwdmRNA13401Prediction0.2202
DmwdRAID01677701mmu-miR-544-5pmiRNAMIMAT0017282DmwdmRNA13401Prediction0.2202
DmwdRAID01709720mmu-miR-141-3pmiRNAMIMAT0000153DmwdmRNA13401Prediction0.2202
DmwdRAID01728032mmu-miR-491-5pmiRNAMIMAT0003486DmwdmRNA13401Prediction0.1828
DmwdRAID01812888mmu-miR-3083-5pmiRNAMIMAT0014874DmwdmRNA13401Prediction0.1828
DmwdRAID01836399mmu-miR-19b-3pmiRNAMIMAT0000513DmwdmRNA13401Prediction0.1828
DmwdRAID01866399mmu-miR-5621-3pmiRNAMIMAT0022370DmwdmRNA13401Prediction0.1828
DmwdRAID01923418mmu-miR-361-3pmiRNAMIMAT0017075DmwdmRNA13401Prediction0.1828
DmwdRAID02059999mmu-miR-7017-5pmiRNAMIMAT0027938DmwdmRNA13401Prediction0.1828
DmwdRAID02285804mmu-miR-135a-5pmiRNAMIMAT0000147DmwdmRNA13401CLIP-seq0.5483
DmwdRAID02324295mmu-miR-466l-3pmiRNAMIMAT0005830DmwdmRNA13401Prediction0.2202
DmwdRAID02326364mmu-miR-8091miRNAMIMAT0031392DmwdmRNA13401Prediction0.1828
DmwdRAID02337401mmu-miR-449bmiRNAMIMAT0005447DmwdmRNA13401CLIP-seq//Prediction0.6478
DmwdRAID02389251mmu-miR-7211-3pmiRNAMIMAT0028391DmwdmRNA13401Prediction0.1828
DmwdRAID02656110mmu-miR-30e-5pmiRNAMIMAT0000248DmwdmRNA13401Prediction0.1828
DmwdRAID02685224mmu-miR-669e-5pmiRNAMIMAT0005853DmwdmRNA13401Prediction0.1828
DmwdRAID02692527mmu-miR-3074-2-3pmiRNAMIMAT0014946DmwdmRNA13401Prediction0.1828
DmwdRAID02695204mmu-miR-433-3pmiRNAMIMAT0001420DmwdmRNA13401Prediction0.1828
DmwdRAID02880451mmu-miR-34c-5pmiRNAMIMAT0000381DmwdmRNA13401CLIP-seq//Prediction0.6478
DmwdRAID02947357mmu-miR-374c-5pmiRNAMIMAT0014953DmwdmRNA13401Prediction0.1828
DmwdRAID03050423mmu-miR-34b-5pmiRNAMIMAT0000382DmwdmRNA13401CLIP-seq//Prediction0.6478
DmwdRAID03052811mmu-miR-34a-5pmiRNAMIMAT0000542DmwdmRNA13401CLIP-seq//Prediction0.6478
DmwdRAID03146257mmu-miR-6987-5pmiRNAMIMAT0027876DmwdmRNA13401Prediction0.1828
DmwdRAID03294587mmu-miR-449a-5pmiRNAMIMAT0001542DmwdmRNA13401CLIP-seq//Prediction0.6478
DmwdRAID03336165mmu-miR-6931-5pmiRNAMIMAT0027762DmwdmRNA13401Prediction0.1828
DmwdRAID03381900mmu-miR-3069-5pmiRNAMIMAT0014844DmwdmRNA13401Prediction0.1828
DmwdRAID03445039mmu-miR-6978-5pmiRNAMIMAT0027858DmwdmRNA13401Prediction0.1828
DmwdRAID03677196mmu-miR-384-5pmiRNAMIMAT0004745DmwdmRNA13401Prediction0.1828
DmwdRAID03828338mmu-miR-7078-5pmiRNAMIMAT0028062DmwdmRNA13401Prediction0.1828
DmwdRAID03847322mmu-miR-7077-3pmiRNAMIMAT0028061DmwdmRNA13401Prediction0.1828
DmwdRAID03896418mmu-miR-30b-5pmiRNAMIMAT0000130DmwdmRNA13401Prediction0.1828
DmwdRAID04013798mmu-miR-7048-3pmiRNAMIMAT0028001DmwdmRNA13401Prediction0.1828
DmwdRAID04018926mmu-miR-30c-5pmiRNAMIMAT0000514DmwdmRNA13401Prediction0.1828