SNP - dbSNP |
dbSNP | Type | Alleles | Het | Se(het) | Fxn-class | Gene Name | Assembly | Chr-pos | Sequence | Entrez Gene |
rs3663313 | snp | C/G | 0.492188 | 0.0620098 | intron-variant | Herc2 | GRCm38.p3 | 7:56132741 | GTTGCCTGTGAACTA[C/G]ACTGTATTACTTGTA | 15204 |
rs3666280 | snp | C/T | 0.359862 | 0.224567 | intron-variant | Herc2 | GRCm38.p3 | 7:56133240 | CCTGATCCTGCATCT[C/T]ACATGCTACAGTACA | 15204 |
rs3671005 | snp | C/T | 0.5 | 0 | intron-variant | Herc2 | Mm_Celera | 7:56143439 | AGAAGAATGTATATT[C/T]TTCTGTGTTTGGGTA | 15204 |
rs3681702 | snp | C/T | 0.5 | 0 | intron-variant | Herc2 | GRCm38.p3 | 7:56052720 | GTTGTCAGGTTTTGT[C/T]GGCAATGACTTACCT | 15204 |
rs3682975 | snp | G/T | 0.375 | 0.216506 | intron-variant | Herc2 | Mm_Celera | 7:56052909 | GTGATACTGGTATTT[G/T]GCCCTTTTTAGATAT | 15204 |
rs3691306 | snp | G/T | 0.5 | 0 | intron-variant | Herc2 | Mm_Celera | 7:56127016 | ATTTATGCTGCCCAT[G/T]ATAGATGCACTAAAA | 15204 |
rs3714163 | snp | A/T | 0.495 | 0.0497494 | intron-variant | Herc2 | Mm_Celera | 7:56137887 | GTGAGCTAAACAAAA[A/T]GTGATAATTAGAAGG | 15204 |
rs6216458 | snp | G/T | 0.5 | 0 | intron-variant | Herc2 | Mm_Celera | 7:56145542 | acacttaaccactgt[G/T]gtgaagatctgagtt | 15204 |
rs6216914 | snp | C/T | 0.5 | 0 | intron-variant | Herc2 | GRCm38.p3 | 7:56145578 | agttttcagcaccca[C/T]atttggtggcttaca | 15204 |
rs6217008 | snp | C/T | 0.5 | 0 | intron-variant | Herc2 | Mm_Celera | 7:56145632 | GACATCAGAGGCCGT[C/T]TTTCAGGCTCATGTT | 15204 |
rs6217446 | snp | A/G | 0.391111 | 0.206368 | intron-variant | Herc2 | Mm_Celera | 7:56145689 | acaTTTAGACATAGA[A/G]TTTACACATAAGTAG | 15204 |
rs6217487 | snp | C/T | 0.408163 | 0.193609 | intron-variant | Herc2 | Mm_Celera | 7:56145710 | ACATAAGTAGTGACA[C/T]aattttaaaaaaata | 15204 |
rs6218021 | snp | A/G | 0.375 | 0.216506 | synonymous-codon | Herc2 | Mm_Celera | 7:56145801 | GGACGACATGAATGC[A/G]TCTGCCCGGGGAGCC | 15204 |
rs6218560 | snp | A/G | 0.42 | 0.183303 | synonymous-codon | Herc2 | Mm_Celera | 7:56145879 | GCTCCCTGTTTCAGG[A/G]CCAGAACTGGCTGCT | 15204 |
rs6218623 | snp | C/T | 0.408163 | 0.193609 | synonymous-codon | Herc2 | Mm_Celera | 7:56145912 | GATGAAGATTGGAAC[C/T]AGGGTCATGAGAGGG | 15204 |
rs6219128 | snp | A/G | 0.396694 | 0.202437 | intron-variant | Herc2 | GRCm38.p3 | 7:56145990 | CTTAGCACATCTTAC[A/G]TATCAGTGGAAGATA | 15204 |
rs6252440 | snp | A/G | 0.5 | 0 | upstream-variant-2KB, intron-variant | Herc2, Gm34121 | GRCm38.p3 | 7:56049389 | gacccttgggagtga[A/G]tttgaagatacatac | 15204 |
rs6252479 | snp | C/T | 0.5 | 0 | upstream-variant-2KB, intron-variant | Herc2, Gm34121 | GRCm38.p3 | 7:56049425 | atgacaaaagacagg[C/T]attttaacgttgcaa | 15204 |
rs6253472 | snp | A/C | 0.5 | 0 | upstream-variant-2KB, intron-variant | Herc2, Gm34121 | GRCm38.p3 | 7:56049599 | AAAgtttaatttcca[A/C]atgcttgaagattnt | 15204 |
rs6253491 | snp | A/G | 0.5 | 0 | upstream-variant-2KB, intron-variant | Herc2, Gm34121 | GRCm38.p3 | 7:56049613 | anatgcttgaagatt[A/G]tgttatgttttattt | 15204 |
rs6254034 | snp | C/T | 0.5 | 0 | upstream-variant-2KB, intron-variant | Herc2, Gm34121 | GRCm38.p3 | 7:56049705 | TTTCTTACTCCCGCA[C/T]CCCCATNCCCCCAGg | 15204 |
rs6254045 | snp | C/T | 0.5 | 0 | upstream-variant-2KB, intron-variant | Herc2, Gm34121 | GRCm38.p3 | 7:56049712 | CTCCCGCANCCCCAT[C/T]CCCCCAGggtctctt | 15204 |
rs6254095 | snp | C/T | 0.5 | 0 | upstream-variant-2KB, intron-variant | Herc2, Gm34121 | GRCm38.p3 | 7:56049738 | ctcttaacccagaat[C/T]cacctgcttctgcct | 15204 |
rs6254545 | snp | A/C | 0.5 | 0 | upstream-variant-2KB, nc-transcript-variant | Herc2, Gm34121 | GRCm38.p3 | 7:56049794 | tactaccaggcccgg[A/C]TCAATTACTTTTTCT | 15204 |
rs6254602 | snp | A/G | 0.5 | 0 | upstream-variant-2KB, nc-transcript-variant | Herc2, Gm34121 | Mm_Celera | 7:56049825 | TAAATTTCCTCTTCT[A/G]TCCACTGACTCAAAG | 15204 |
rs6255098 | snp | A/C | 0.5 | 0 | upstream-variant-2KB, nc-transcript-variant | Herc2, Gm34121 | Mm_Celera | 7:56049874 | TTAAAGCACAGGGAG[A/C]CTCGAGAACNTCGTC | 15204 |
rs6255113 | snp | C/T | 0.5 | 0 | upstream-variant-2KB, nc-transcript-variant | Herc2, Gm34121 | Mm_Celera | 7:56049884 | GGGAGNCTCGAGAAC[C/T]TCGTCCCGCTGCAAA | 15204 |
rs6270685 | snp | A/G | 0.5 | 0 | intron-variant | Herc2 | Mm_Celera | 7:56128373 | tctctggagtgtaca[A/G]ccacacattggatat | 15204 |
rs6270757 | snp | G/T | 0.5 | 0 | intron-variant | Herc2 | Mm_Celera | 7:56128414 | ccctacccactccag[G/T]gcttatggaccatca | 15204 |
rs6270791 | snp | G/T | 0.5 | 0 | intron-variant | Herc2 | Mm_Celera | 7:56128434 | atggaccatcatgga[G/T]agggtgtagacatat | 15204 |
rs6284320 | snp | A/G | 0.5 | 0 | intron-variant | Herc2 | Mm_Celera | 7:56128647 | AGCTAGGGAGAGTCA[A/G]TGGTGtcacttttct | 15204 |
rs6284710 | snp | C/T | 0.444444 | 0.157135 | intron-variant | Herc2 | Mm_Celera | 7:56128675 | TCTTTGTGGGTGTGG[C/T]TCCTGGACTCAAGTA | 15204 |
rs6305806 | snp | A/G | 0.5 | 0 | intron-variant | Herc2 | Mm_Celera | 7:56097112 | tgtacatgagtagct[A/G]cagctgtcttcagac | 15204 |
rs6306262 | snp | A/G | 0.5 | 0 | intron-variant | Herc2 | Mm_Celera | 7:56097186 | accatgtggttgctg[A/G]gaantgaactcagga | 15204 |
rs6306282 | snp | C/G | 0.5 | 0 | intron-variant | Herc2 | Mm_Celera | 7:56097190 | tgtggttgctgngaa[C/G]tgaactcaggatgtc | 15204 |
rs6341883 | snp | A/G | 0.48 | 0.0979796 | intron-variant | Herc2 | Mm_Celera | 7:56099180 | ATGGAACCATTTTAT[A/G]TTGTGTTGTTTTAAG | 15204 |
rs6341971 | snp | A/T | 0.493827 | 0.0552116 | intron-variant | Herc2 | Mm_Celera | 7:56099226 | AGACTTGGCAGTAGG[A/T]GGGTGTGCTATTCCC | 15204 |
rs6369437 | snp | G/T | 0.5 | 0 | intron-variant | Herc2 | Mm_Celera | 7:56172509 | tttattatttaccag[G/T]tgctgcatttaggtt | 15204 |
rs6369481 | snp | A/T | 0.5 | 0 | intron-variant | Herc2 | Mm_Celera | 7:56172533 | ttaggtttagtttgt[A/T]tttatttttattttt | 15204 |
rs6370480 | snp | A/G | 0.5 | 0 | intron-variant | Herc2 | Mm_Celera | 7:56172680 | acagtctgcagccca[A/G]ttcccaacaatggtt | 15204 |
rs6370630 | snp | C/T | 0.415225 | 0.187619 | intron-variant | Herc2 | Mm_Celera | 7:56172764 | tacTAGAGGCTTATC[C/T]TGTCTGATACATTGT | 15204 |
rs6371055 | snp | A/C | 0.415225 | 0.187619 | intron-variant | Herc2 | Mm_Celera | 7:56172812 | TTGGCATTTTTCTCC[A/C]TCATTTCTTCAGTGA | 15204 |
rs6371074 | snp | A/G | 0.391111 | 0.206368 | intron-variant | Herc2 | GRCm38.p3 | 7:56172828 | TCATTTCTTCAGTGA[A/G]TCAATCAAACTAATT | 15204 |
rs6371108 | snp | A/T | 0.244898 | 0.249948 | intron-variant | Herc2 | Mm_Celera | 7:56172847 | ATCAAACTAATTGTT[A/T]AATCATCAAGTATTT | 15204 |
rs6371628 | snp | A/G | 0.375 | 0.216506 | intron-variant | Herc2 | Mm_Celera | 7:56172944 | TCAGGGATTATTtct[A/G]tatctttgtttctgt | 15204 |
rs6372060 | snp | C/G | 0.415225 | 0.187619 | intron-variant | Herc2 | Mm_Celera | 7:56172997 | CTTGATTGCTTTGTG[C/G]CCTGTAACATGATCA | 15204 |
rs6372134 | snp | A/G | 0.415225 | 0.187619 | intron-variant | Herc2 | Mm_Celera | 7:56173052 | ctatagatacctatt[A/G]agtccatttgatcta | 15204 |
rs31009431 | snp | G/T | 0.444444 | 0.157135 | intron-variant | Herc2 | Mm_Celera | 7:56222081 | GCAACCAGGGATTCA[G/T]AGTCGGAAAATGCTC | 15204 |
rs31011246 | snp | A/G | 0.444444 | 0.157135 | utr-variant-3-prime | Herc2 | Mm_Celera | 7:56231235 | AGAATACCACTCCTT[A/G]AAATGTGTGGAAGAG | 15204 |
rs31018590 | snp | C/G | 0.444444 | 0.157135 | intron-variant | Herc2 | GRCm38.p3 | 7:56130782 | ATCTGGGTTTTAGGC[C/G]AGCCAAGGCTATATA | 15204 |
rs31040538 | snp | A/G | 0.33241 | 0.236027 | intron-variant | Herc2 | Mm_Celera | 7:56090701 | AATCCTACACACTGA[A/G]GGAAGCACCCCCCAA | 15204 |
rs31040960 | snp | A/C | 0.429688 | 0.173817 | intron-variant | Herc2 | Mm_Celera | 7:56132185 | AATTTAGAATCTTTC[A/C]CCCAGGGTTCTCCTC | 15204 |
rs31042396 | snp | A/G | 0.444444 | 0.157135 | intron-variant | Herc2 | Mm_Celera | 7:56114095 | TTAAGTTCGTCAGGG[A/G]GAAAGTGGGTGCTAA | 15204 |
rs31042399 | snp | C/G | 0.444444 | 0.157135 | intron-variant | Herc2 | GRCm38.p3 | 7:56158076 | CAGTTACCTTGGAAG[C/G]TGAAAGCAGGAAGAT | 15204 |
rs31047956 | snp | A/G | 0.444444 | 0.157135 | intron-variant | Herc2 | Mm_Celera | 7:56195499 | AGTCTTGTTTTATTT[A/G]AAATGATTTCTTTAA | 15204 |
rs31048166 | snp | C/G | 0.456747 | 0.140554 | intron-variant | Herc2 | Mm_Celera | 7:56159799 | TCAGTTATTGGGTAC[C/G]TACTCATCTTGCTTG | 15204 |
rs31048758 | snp | A/G | 0.5 | 0 | intron-variant | Herc2 | GRCm38.p3 | 7:56170541 | CTTACTTTTAGTAAC[A/G]ATTATTTGATTTCTT | 15204 |
rs31052877 | snp | G/T | 0.375 | 0.216506 | intron-variant | Herc2 | Mm_Celera | 7:56186877 | AGTCATGGAGGGTGG[G/T]TCATAGGACTACATA | 15204 |
rs31053275 | snp | A/G | 0.444444 | 0.157135 | intron-variant | Herc2 | GRCm38.p3 | 7:56136287 | AAACAGAAGCAGTGG[A/G]AGAGTGCTGATTGCT | 15204 |
rs31056130 | snp | A/G | 0.375 | 0.216506 | intron-variant | Herc2 | Mm_Celera | 7:56141293 | AGATTAAGCTGCACA[A/G]CTGTAACATATGTGT | 15204 |
rs31056488 | snp | A/T | 0.387812 | 0.208586 | intron-variant | Herc2 | Mm_Celera | 7:56195461 | CTACTCTTAAATTCT[A/T]ATATGCATTTGGATT | 15204 |
rs31056822 | snp | A/C | 0.387812 | 0.208586 | intron-variant | Herc2 | GRCm38.p3 | 7:56147164 | GATTGATTGATTGAA[A/C]GTTGAAATACAGAGA | 15204 |
rs31058101 | snp | G/T | 0.359862 | 0.224567 | intron-variant | Herc2 | GRCm38.p3 | 7:56069128 | CGACTGCATATATGG[G/T]CTGGCCGACTGCATA | 15204 |
rs31059180 | snp | C/T | 0.444444 | 0.157135 | intron-variant | Herc2 | Mm_Celera | 7:56108064 | TGACTTCAGTGTTTT[C/T]CCTGATTACAGGTTT | 15204 |
rs31060442 | snp | G/T | 0.444444 | 0.157135 | intron-variant | Herc2 | Mm_Celera | 7:56122211 | AGAGCCAAAGGCTGA[G/T]GGTAAATTGTTCTTT | 15204 |
rs31063374 | snp | C/T | 0.444444 | 0.157135 | intron-variant | Herc2 | GRCm38.p3 | 7:56149352 | CCTCACTGAGCTCTA[C/T]AGGAAGGTCCCCTTT | 15204 |
rs31064930 | snp | A/G | 0.5 | 0 | intron-variant | Herc2 | GRCm38.p3 | 7:56061042 | TCTTCCTTTCTGGAT[A/G]GAAAGTTTGAGTTCT | 15204 |
rs31086909 | snp | A/G | 0.5 | 0 | intron-variant | Herc2 | GRCm38.p3 | 7:56189060 | AACATGCACAAAATG[A/G]GAACTAATGAAGGTA | 15204 |
rs31097086 | snp | A/G | 0.489796 | 0.070696 | intron-variant | Herc2 | Mm_Celera | 7:56147531 | TTTGGAAGTGGATCC[A/G]AGCTATAGAGTGTGC | 15204 |
rs31100194 | snp | C/T | 0.444444 | 0.157135 | intron-variant | Herc2 | Mm_Celera | 7:56092203 | AGTCATCTAAGAGCT[C/T]TTCTTTTAACATGTT | 15204 |
rs31133992 | snp | A/G | 0.375 | 0.216506 | intron-variant | Herc2 | Mm_Celera | 7:56058530 | GCTTATAGAAGATAG[A/G]GGTTCCAGGACAGCC | 15204 |
rs31134213 | snp | A/G | 0.359862 | 0.224567 | intron-variant | Herc2 | Mm_Celera | 7:56063636 | ATCAATAATATTTCC[A/G]TGATGTCTATAGGAC | 15204 |
rs31135402 | snp | A/G | 0.345679 | 0.230967 | intron-variant | Herc2 | GRCm38.p3 | 7:56068502 | GAGTGAATAGCTTTT[A/G]GTTTAAACTGAAACA | 15204 |
rs31137392 | snp | A/T | 0.387812 | 0.208586 | intron-variant | Herc2 | Mm_Celera | 7:56182299 | CTGTGGCTAAGGTAA[A/T]TAGAAACTAACAGCT | 15204 |
rs31143061 | snp | C/T | 0.444444 | 0.157135 | intron-variant | Herc2 | Mm_Celera | 7:56167821 | TGCATGCCTGATACC[C/T]GTGGAAGCCAGAAAA | 15204 |
rs31146126 | snp | C/T | 0.375 | 0.216506 | intron-variant | Herc2 | Mm_Celera | 7:56193376 | TCCTTGCAAGGCTCC[C/T]GGTGTGGACCAGACA | 15204 |
rs31160201 | snp | C/T | 0.375 | 0.216506 | intron-variant | Herc2 | Mm_Celera | 7:56122517 | TTTTTTTTTTTTAAT[C/T]TTTCTTTTACTTTGA | 15204 |
rs31160626 | snp | A/T | 0.32 | 0.24 | upstream-variant-2KB, intron-variant | Herc2, Gm34121 | Mm_Celera | 7:56048408 | CAAACCAGCGAGTTT[A/T]GAGAGAGAGAACTAC | 15204 |
rs31163338 | snp | A/G | 0.401235 | 0.199068 | intron-variant | Herc2 | Mm_Celera | 7:56219094 | AAGAGATACCTAGTG[A/G]CTGAATGATCTCCCT | 15204 |
rs31180182 | snp | A/G | 0.415225 | 0.187619 | intron-variant | Herc2 | Mm_Celera | 7:56158159 | CTGGTTAAAATACAA[A/G]TAAACATTCTGGGCC | 15204 |
rs31182047 | snp | C/T | 0.487535 | 0.077957 | synonymous-codon | Herc2 | GRCm38.p3 | 7:56153423 | TAACTCCCAGCTTTG[C/T]TCTGTCACACAAAGC | 15204 |
rs31182052 | snp | C/T | 0.265928 | 0.249492 | intron-variant | Herc2 | GRCm38.p3 | 7:56205865 | ATTTTTTGCTGACTG[C/T]AGGTGCTAGTAGCTC | 15204 |
rs31186208 | snp | G/T | 0.444444 | 0.157135 | intron-variant | Herc2 | Mm_Celera | 7:56210405 | AGGGATGGCTCAGCC[G/T]TTAAAATCACTGGCT | 15204 |
rs31192953 | snp | A/T | 0.444444 | 0.157135 | intron-variant | Herc2 | Mm_Celera | 7:56213264 | GATTTACATTTTCAT[A/T]TAAATATAAATTTAT | 15204 |
rs31217635 | snp | A/G | 0.375 | 0.216506 | intron-variant | Herc2 | Mm_Celera | 7:56190918 | AAGTCATAGTTTAAT[A/G]TATATAATCCATTGT | 15204 |
rs31228772 | snp | A/T | 0.277778 | 0.248452 | intron-variant | Herc2 | Mm_Celera | 7:56188418 | AACTGTATGTACTCA[A/T]GTTCTCTGGATACAT | 15204 |
rs31229024 | snp | A/T | 0.46875 | 0.121031 | intron-variant | Herc2 | Mm_Celera | 7:56159896 | AATGCTTTTGGATTT[A/T]TCAGCTCAGGTTTTC | 15204 |
rs31230505 | snp | C/G | 0.444444 | 0.157135 | intron-variant | Herc2 | Mm_Celera | 7:56222079 | GGGCAACCAGGGATT[C/G]ATAGTCGGAAAATGC | 15204 |
rs31231358 | snp | C/T | 0.493827 | 0.0552116 | intron-variant | Herc2 | Mm_Celera | 7:56206054 | GTGTGTGTTAATTAA[C/T]TAATTTTTGGAATTC | 15204 |
rs31231830 | snp | C/T | 0.432133 | 0.171253 | intron-variant | Herc2 | Mm_Celera | 7:56138643 | ATAGATCTGCCCTAA[C/T]CACATTATGTGGAAA | 15204 |
rs31232190 | snp | C/T | 0.444444 | 0.157135 | intron-variant | Herc2 | GRCm38.p3 | 7:56116346 | CATACACACACACAC[C/T]CCAATAGATTTTTCC | 15204 |
rs31233452 | snp | C/T | 0.444444 | 0.157135 | intron-variant | Herc2 | GRCm38.p3 | 7:56182746 | ACATCGTGAGCAGTT[C/T]CTCATAAGCTTTTGC | 15204 |
rs31234093 | snp | A/G | 0.444444 | 0.157135 | intron-variant | Herc2 | Mm_Celera | 7:56171438 | TTCTATTATGATTTT[A/G]TATACTATGTCTTTA | 15204 |
rs31235454 | snp | A/G | 0.375 | 0.216506 | intron-variant | Herc2 | Mm_Celera | 7:56220106 | ATAGAATGCTTACTT[A/G]CTTGGCATGCACAAA | 15204 |
rs31239156 | snp | C/G | 0.387812 | 0.208586 | intron-variant | Herc2 | Mm_Celera | 7:56225358 | TGCTCTCCTCTGGGA[C/G]CACGAATCCTTTCAA | 15204 |
rs31240501 | snp | C/T | 0.498615 | 0.0262793 | intron-variant | Herc2 | Mm_Celera | 7:56223399 | TCCAGTTTAATAACC[C/T]AGTATTGCTAACATT | 15204 |
rs31240749 | snp | C/T | 0.345679 | 0.230967 | intron-variant | Herc2 | Mm_Celera | 7:56157090 | TGAAGCAGTCAGCAG[C/T]GTTATTTGACTATCA | 15204 |
rs31246933 | snp | A/G | 0.432133 | 0.171253 | intron-variant | Herc2 | Mm_Celera | 7:56228018 | AGAGCAGAGAAAAGT[A/G]TGCATCTGAGAGAGT | 15204 |
rs31247625 | snp | C/T | 0.459184 | 0.136902 | intron-variant | Herc2 | GRCm38.p3 | 7:56148445 | ACTGAGTTCAGGTAG[C/T]CACCTATTCTAAGTT | 15204 |
rs31249357 | snp | C/T | 0.498615 | 0.0262793 | intron-variant | Herc2 | Mm_Celera | 7:56109783 | TTTCTCCCTTCAGGG[C/T]ATGTGAGATTAAAGT | 15204 |