DNA & RNA Element - RepTar |
Gene Name | miRNA | Begin | End | Profile |
Kctd13 | mmu-miR-206 | beg:156 | end:176 | pic:3' GGTGTGTGAAGGAATGTAAGGT 5'& |||||. ||||||||| &5' CCACATGG-----TACATTCCA 3' |
Kctd13 | mmu-miR-1 | beg:158 | end:176 | pic:3' TATGTATGAAGAAATGTAAGGT 5'& ||||. ||||||||| &5' --ACATGG-----TACATTCCA 3' |
Kctd13 | mcmv-miR-m59-1 | beg:147 | end:159 | pic:3' GACTGCCAGCTCCGTGACGATT 5'& ||||||||| &5' -------------CACTGCTAA 3' |
Kctd13 | mmu-miR-2141 | beg:378 | end:393 | pic:3' TTGAAAAGACTGTGGAGGA 5'& || | ||||||| &5' ------TCCGCCACCTCC- 3' |
Kctd13 | mmu-miR-1943 | beg:381 | end:395 | pic:3' AGGTCCACGGGTCTAGGAGGGAA 5'& ||| ||||||| &5' -------GCCA----CCTCCCT- 3' |
Kctd13 | mmu-miR-1955 | beg:23 | end:38 | pic:3' TTTTCGACGTCACGTAGGACCCTGA 5'& ||| |.||||||| &5' -----------TGC-TTCTGGGAC- 3' |
Kctd13 | mmu-miR-1958 | beg:117 | end:134 | pic:3' TGAATGACGAA-GGTGAAAGGAT 5'& |. || ||||||| &5' -------GTGAGCC-CTTTCCT- 3' |
Kctd13 | mmu-miR-673-3p | beg:48 | end:64 | pic:3' CCACGTGTCTTGAGT--CGGGGCCT 5'& ||| ||||||| &5' -----------CTCTTTGCCCCGG- 3' |
Kctd13 | mmu-miR-423-5p | beg:353 | end:370 | pic:3' TTTCAGAGCGAGAGACGGGGAGT 5'& |. ||.|||||||| &5' --------GTACTTTGCCCCTC- 3' |
Kctd13 | mmu-miR-7a | beg:72 | end:91 | pic:3' TGTTGTTTTAGTGATCAGAAGGT 5'& ||.||. .||||||| &5' ------AAGTCGTGGGTCTTCC- 3' |
Kctd13 | mmu-miR-7b | beg:72 | end:91 | pic:3' TGTTGTTTTAGTGTTCAGAAGGT 5'& ||.||. .||||||| &5' ------AAGTCGTGGGTCTTCC- 3' |
Kctd13 | mcmv-miR-m108-2-5p.1 | beg:199 | end:218 | pic:3' GCCACGAGCGCAGCTCACTGGCG 5'& | || ||||||||| &5' ----GAAAGCC---AGTGACCGC 3' |
Kctd13 | mcmv-miR-m107-1-5p | beg:194 | end:217 | pic:3' CCACTGAGCTCTGC---TCACTGGC 5'& ||. ||| |||||||| &5' -----CTTCAGAAAGCCAGTGACCG 3' |
Kctd13 | mcmv-miR-m59-1 | beg:425 | end:437 | pic:3' GACTGCCAGCTCCGTGACGATT 5'& || |||||| &5' ------------GCTCTGCTA- 3' |
Kctd13 | mmu-miR-103 | beg:95 | end:116 | pic:3' AGTATCGGGA-C-ATGTTACGACGA 5'& |||| | |.| ||||||.| &5' ------CCCTCGTTGC-ATGCTGTT 3' |
Kctd13 | mmu-miR-106a | beg:343 | end:364 | pic:3' GATGGACGTGACAATCGTGAAAC 5'& .|||| ||.|||||| &5' ----TTGCAACAG-AGTACTTTG 3' |
Kctd13 | mmu-miR-106b | beg:343 | end:364 | pic:3' TAGACGTGACAGTCGTGAAAT 5'& .|||| ||.|||||. &5' --TTGCAACAG-AGTACTTTG 3' |
Kctd13 | mmu-miR-107 | beg:95 | end:116 | pic:3' ACTATCGGGA-C-ATGTTACGACGA 5'& |||| | |.| ||||||.| &5' ------CCCTCGTTGC-ATGCTGTT 3' |
Kctd13 | mmu-miR-122 | beg:307 | end:331 | pic:3' GTTTGTGGTAA-CAGTGTGAGGT 5'& |. |.|| | ||||||||| &5' --AGTGCTATCAGCCACACTCCA 3' |
Kctd13 | mmu-miR-122 | beg:157 | end:176 | pic:3' GTTTGTGGTA-ACAGTGTGAGGT 5'& |||| || .|||.|||| &5' -----ACCACATGGTACATTCCA 3' |
Kctd13 | mmu-miR-124star | beg:275 | end:295 | pic:3' TAGTTCCAGGCGAC--ACTTGTGC 5'& ||. ||||||| &5' ------GTTAATACATTGAACAC- 3' |
Kctd13 | mmu-miR-1306 | beg:137 | end:160 | pic:3' GTAGTGGTG-GTCTCGGTTGCA 5'& ||||||||| || ||.||| &5' CATCACCACTCACTGCTAAC-- 3' |
Kctd13 | mmu-miR-135astar | beg:212 | end:237 | pic:3' GCGGTGCCGAGGT-TAGGGATAT 5'& |||| | |||.| ||||.|.| &5' CGCCCCTCCTCTACATCCTTGT- 3' |
Kctd13 | mmu-miR-150star | beg:410 | end:429 | pic:3' GATAGGGGGTCCGGACATGGTC 5'& || | |||||.|||| &5' ------CCTGGACCTGTGCCAG 3' |
Kctd13 | mmu-miR-183 | beg:299 | end:318 | pic:3' TCACTTAAGATGGTCACGGTAT 5'& ||| ||||||.|| &5' ---GAAAGGA--CAGTGCTAT- 3' |
Kctd13 | mmu-miR-1839-3p | beg:67 | end:88 | pic:3' CGACAACCATCTATTCATCCAGA 5'& |||| || ||.||||| &5' GCTGGCCA-AGTC--GTGGGTCT 3' |
Kctd13 | mmu-miR-184 | beg:34 | end:53 | pic:3' TGGGAATAGTCAAGAGGCAGGT 5'& ||| .|| |||.|||. &5' --CCTAGTCC---CTCTGTCT- 3' |
Kctd13 | mmu-miR-184 | beg:76 | end:99 | pic:3' TGGGAATAGTCAAGAGGCAGGT 5'& | . .|| |||.|||| &5' -CGTGGGTCTTCCCTCTGTCC- 3' |
Kctd13 | mmu-miR-1935 | beg:418 | end:436 | pic:3' TCTCTAGGCGGTCGGAGACGGA 5'& | .||||| ||||||. &5' -----TGTGCCAG-CTCTGCT- 3' |
Kctd13 | mmu-miR-1953 | beg:115 | end:134 | pic:3' GTC-TTCGGACTCTTGAAAGGGT 5'& ||| .|||| ||||||. &5' CAGTGAGCC------CTTTCCT- 3' |
Kctd13 | mmu-miR-1953 | beg:234 | end:252 | pic:3' GTCTTCGGACTCTTGAAAGGGT 5'& .||| |||||.| &5' ------TCTGCCATCTTTCTC- 3' |
Kctd13 | mmu-miR-1959 | beg:211 | end:235 | pic:3' GAGGTGACTC---GATGTAGGGG 5'& ||.| ||||||||.. &5' --CCGCCCCTCCTCTACATCCTT 3' |
Kctd13 | mmu-miR-20b | beg:343 | end:364 | pic:3' GATGGACGTGATACTCGTGAAAC 5'& .|||| |||.|||||| &5' ----TTGCAACA-GAGTACTTTG 3' |
Kctd13 | mmu-miR-21star | beg:94 | end:116 | pic:3' CTGTC-GGGTAGC--TG-ACGACAAC 5'& | ||| ||| .| ||||||| &5' ----GTCCCCTCGTTGCATGCTGTT- 3' |
Kctd13 | mmu-miR-27astar | beg:107 | end:129 | pic:3' ACGAGTGTTCGTCGATTCGGGA 5'& |||| ||| |.|||||| &5' TGCTGTTTT-CAG-TGAGCCCT 3' |
Kctd13 | mmu-miR-302c | beg:341 | end:362 | pic:3' GGTGACTTTGTACCTTCGTGAA 5'& |||.|| |||| .||.|||| &5' CCATTGCAACA---GAGTACTT 3' |
Kctd13 | mmu-miR-302d | beg:151 | end:182 | pic:3' TGTGAGTT-TGTACCT-------TCGTGAAT 5'& .|| |||||| ||||.|| &5' --GCTAACCACATGGTACATTCCAGCATTT- 3' |
Kctd13 | mmu-miR-3099 | beg:234 | end:257 | pic:3' AGGGGTTGGAGAGAGATCGGAT 5'& ||. | |.||.||||| || &5' TCTGCCATCTTTCTCTTACC-- 3' |
Kctd13 | mmu-miR-31 | beg:13 | end:31 | pic:3' GTCGATACGGTCGTAGAACGGA 5'& |||.| || ||||||.| &5' --GCTGT-CC----TCTTGCTT 3' |
Kctd13 | mmu-miR-3470a | beg:401 | end:425 | pic:3' GGTCGGACCAGATGTTT-CACT 5'& |.|| |||| ||. | ||| &5' CTAGGCTGGCCTGGACCTGTG- 3' |
Kctd13 | mmu-miR-3470b | beg:401 | end:425 | pic:3' GGTCGGACCAGATGTCT-CACT 5'& |.|| |||| ||. | ||| &5' CTAGGCTGGCCTGGACCTGTG- 3' |
Kctd13 | mmu-miR-3473 | beg:232 | end:251 | pic:3' CCGACTCGGTAGAGAGGT 5'& |.| |||||||.||. &5' -GTTCTGCCATCTTTCT- 3' |
Kctd13 | mmu-miR-34a | beg:141 | end:158 | pic:3' TGTTGGTCGATTCTGTGACGGT 5'& |||| || ||||||.| &5' ---ACCA-CT----CACTGCTA 3' |
Kctd13 | mmu-miR-383 | beg:249 | end:265 | pic:3' TCGGTGTCAGTGGAAGACTAGA 5'& |.||| ||||||. &5' --------TTACCATCTGATT- 3' |
Kctd13 | mmu-miR-423-5p | beg:201 | end:223 | pic:3' TTTCAGAGCGAGAGACGGGGAGT 5'& |||| | |. | ||||||| &5' AAAG-CCAGTGA-CCGCCCCTC- 3' |
Kctd13 | mmu-miR-423-5p | beg:79 | end:103 | pic:3' TTTCAGAGCGAGAGAC-GGGGAGT 5'& ..||||. | ||||| |||||| &5' -GGGTCTTCC-CTCTGTCCCCTC- 3' |
Kctd13 | mmu-miR-449c | beg:142 | end:157 | pic:3' GGTCGATCGTTACGTGACGGA 5'& ||| || ||||||. &5' CCA-CT-------CACTGCT- 3' |
Kctd13 | mmu-miR-540-3p | beg:401 | end:422 | pic:3' GGTCCTAGCTGGAGACTGGA 5'& |.||| .|.||| ||||| &5' CTAGGC-TGGCCTG-GACCT 3' |
Kctd13 | mmu-miR-654-5p | beg:235 | end:258 | pic:3' TGTGTACAAGACGTC-------GAATGGT 5'& |||||| ||||||| &5' -------TTCTGCCATCTTTCTCTTACCA 3' |
Kctd13 | mmu-miR-669g | beg:293 | end:315 | pic:3' TAGTACAGTTGTGTATGTTACGT 5'& |.||| .| |||.||| &5' --CGTGTAGAAAGG-ACAGTGC- 3' |
Kctd13 | mmu-miR-694 | beg:103 | end:121 | pic:3' GAAGTCCGT-TG-TAAAAGTC 5'& ||| .| .||||||| &5' ------GCATGCTGTTTTCAG 3' |
Kctd13 | mmu-miR-709 | beg:34 | end:55 | pic:3' AGGAGGACGGAGACGGAGG 5'& ||| ||||||.|||. &5' -CCTAGTCCCTCTGTCTCT 3' |
Kctd13 | mmu-miR-713 | beg:103 | end:123 | pic:3' CGACAC-ACGGAAGTCACGT 5'& || || ||..||||||| &5' GCA-TGCTGTTTTCAGTG-- 3' |
Kctd13 | mmu-miR-741 | beg:221 | end:250 | pic:3' AGATGTAT---CTT-ACCGTAGAGAGT 5'& ||||||| | || |||||.|| &5' TCTACATCCTTGTTCTGCCATCTTTC- 3' |
Kctd13 | mmu-miR-744 | beg:417 | end:435 | pic:3' ACGACAATCGGGATCGGGGCGT 5'& |||| ||| |||.|.|| &5' --CTGT--GCC--AGCTCTGC- 3' |
Kctd13 | mmu-miR-744 | beg:44 | end:70 | pic:3' ACGACAAT----CGGGATCGGGGCGT 5'& |||| |||| ||.|.|| &5' --CTGTCTCTTTGCCCCGGCTCTGC- 3' |
Kctd13 | mmu-miR-761 | beg:60 | end:72 | pic:3' ACACAGTCAAAGTGGGACGACG 5'& .|.|||||| &5' ------------GCTCTGCTG- 3' |
Kctd13 | mmu-miR-875-3p | beg:100 | end:121 | pic:3' GTATCGGAGT-C-ATAAAAGTCC 5'& |. || | |.||||||| &5' ----GTTGCATGCTGTTTTCAG- 3' |
Kctd13 | mmu-miR-877 | beg:212 | end:229 | pic:3' GGGACGCGGTAGAGGAGATG 5'& |||| ||||||||| &5' -----CGCCC-CTCCTCTAC 3' |
Kctd13 | mmu-miR-877 | beg:416 | end:438 | pic:3' GGGACGCGGTAGAGGAGATG 5'& ||||.|||| |||. |||. &5' -CCTGTGCCAGCTCTGCTAT 3' |
Kctd13 | mmu-miR-881star | beg:38 | end:58 | pic:3' TCTACACTGACAATAGAGAGAC 5'& || || |.|||||.|| &5' ----GTCCCTC-TGTCTCTTTG 3' |
Kctd13 | mmu-miR-92astar | beg:359 | end:380 | pic:3' CATTACGGTGGTTA--GGGGTGGA 5'& |||| || ||||||| &5' ----TGCC-CCTCCTGCCCCACC- 3' |
Kctd13 | mmu-miR-93 | beg:339 | end:364 | pic:3' GATGG--ACGTGCTTGTCGTGAAAC 5'& .|| |||| | ||.|||||| &5' --GCCATTGCAAC-AGAGTACTTTG 3' |