Coro1a
DNA & RNA Element - miRTarBase
Target Gene (Entrez ID)miRTarBase IDmiRNASpecies (miRNA)Target GeneSpecies (Target Gene)ExperimentsSupport TypeReferences (PMID)
MIRT015957mmu-miR-124-3pMus musculusCoro1a12721Mus musculusMicroarrayFunctional MTI (Weak)18619591
MIRT053611mmu-miR-320-3pMus musculusCoro1a12721Mus musculusFlow//Luciferase reporter assay//qRT-PCR//Western blotFunctional MTI22925886
DNA & RNA Element - microRNA
Mirbase AccmiRNA NameGene IDGene SymbolmiRNA AlignmentAlignmentGene AlignmentmiRNA StartmiRNA EndGene StartGene EndGenome CoordinatesConservationAlign ScoreSeed CatEnergymirSVR Score
MIMAT0000376mmu-miR-29812721Coro1acccUUCUUGUCGG--GAGGAGACGg ::|: ||||| | ||||||| ucuGGGGCCAGCCAUCCCCUCUGCu2211741[mm9:7:133843354-133843378:-]0.51941597-28.30-0.1202
MIMAT0004635mmu-miR-92a*12721Coro1acauuACGGUGGUUAGGGGUGGa |||: ||| ||||||| ccucUGCUCCCA--CCCCACCc2193453[mm9:7:133843342-133843361:-]0.51321557-22.18-0.4319
MIMAT0004663mmu-miR-200c*12721Coro1agguuuGUG-ACGACCCAUUCUGc ||: || || |||||| caggcCAUAUGGUGAAUAAGACg2185577[mm9:7:133843318-133843340:-]0.50691246-18.13-0.1457
MIMAT0003898mmu-miR-76012721Coro1aaggggugucuGGGUCUCGGc ||||||||| -------aacCCCAGAGCCc211113[mm9:7:133843382-133843394:-]0.51941507-19.53-0.3456
MIMAT0004237mmu-miR-74212721Coro1aaaaugggucguaccaCCGAAAg |||||| cgaaaauaauaaaacGGCUUUa287697[mm9:7:133843298-133843319:-]0.50691206-8.96-0.4871
MIMAT0005849mmu-miR-119112721Coro1aaucCCGAUGUAUC----AUUCUGac ||| |:||:| |||||| ucaGGCCAUAUGGUGAAUAAGACga3195478[mm9:7:133843317-133843341:-]0.50691330-17.16-0.2418
MIMAT0009435mmu-miR-196212721Coro1auacacaGGGUCACGGUCGG-AGa :|::| ||||||| || cccucaUCUGGGGCCAGCCAUCc2171133[mm9:7:133843362-133843384:-]0.51941240-21.05-0.2352
MIMAT0000559mmu-miR-32612721Coro1augaccuccuucccGGGUCUCc ||||||| ----------aacCCCAGAGc29111[mm9:7:133843384-133843394:-]0.51941407-12.83-0.1655
MIMAT0004642mmu-miR-33012721Coro1acggauucuguguccGGGUCUCu ||||||| -----------aacCCCAGAGc29111[mm9:7:133843384-133843394:-]0.51941407-16.47-0.1655
MIMAT0000666mmu-miR-32012721Coro1aagcgggagaGUUGGGUCGAAAa :|| |:||||| cgaaaauaaUAAAACGGCUUUa2147697[mm9:7:133843298-133843319:-]0.50691290-10.57-0.1210
MIMAT0003128mmu-miR-48512721Coro1acuuaAGUAG-UGCCGGUCGG-AGa ||||| : |||||||| || gcccUCAUCUGGGGCCAGCCAUCc2191033[mm9:7:133843362-133843385:-]0.51941330-25.58-0.2395
DNA & RNA Element - TRANSFAC
AccessionASDescriptionSpeciesEntrezPubmedBinding Info
G063038Coro1aMus musculus1272119536157 0 0 R53546; MOUSE$CORO1A_02; Binding factors: mmu-let-7a-5p , mmu-let-7b-5p , mmu-let-7c-5p , mmu-let-7d-5p , mmu-let-7e-5p , mmu-let-7f-5p , mmu-let-7g-5p , mmu-let-7i-5p , mmu-miR-98-5p
DNA & RNA Element - RepTar
Gene NamemiRNABeginEndProfile
Coro1ammu-miR-92astarbeg:35end:53pic:3' CATTACGGTGGTTAGGGGTGGA 5'& ||| ||| ||||||| &5' ----TGCTCCCA--CCCCACC- 3'
Coro1ammu-miR-705beg:39end:57pic:3' ACGGGTGGGGTGGAGGGTGG 5'& ||||||||||| |.|| &5' --CCCACCCCACC-CTCA-- 3'
Coro1ammu-miR-134beg:29end:52pic:3' GGGGAGACCAGT-TGGTCAGTGT 5'& |||||||| || ||| ||| &5' CCCCTCTGCTCCCACCC--CAC- 3'
Coro1ammu-miR-146bstarbeg:2end:25pic:3' TGGTCTTGACTCAGGGATCCCG 5'& |||||.| .||.|||| &5' -CCAGAGCCCTCA-TCTGGGGC 3'
Coro1ammu-miR-1935beg:20end:42pic:3' TCTCTAGG-CGGTC--GGAGACGGA 5'& | || |||| |||||||. &5' ---GGGCCAGCCATCCCCTCTGCT- 3'
Coro1ammu-miR-1938beg:30end:48pic:3' CTGGCTTGATGTTCAGGGTGGC 5'& || ||.| ||||||| &5' --CCCCTCTGC---TCCCACC- 3'
Coro1ammu-miR-298beg:19end:42pic:3' CCCTTCTTGTCGGGA--GGAGACGG 5'& |||. ||||| |||||||. &5' GGGGC---CAGCCATCCCCTCTGCT 3'
Coro1ammu-miR-30c-2starbeg:31end:46pic:3' TCTCATTTGTCGGAA--GAGGGTC 5'& ||| |||||| &5' -----------CCTCTGCTCCCA- 3'
Coro1ammu-miR-328beg:4end:28pic:3' TGCCTTCCCGTCTC---------TCCCGGTC 5'& ||||| .||||||| &5' ---------CAGAGCCCTCATCTGGGGCCAG 3'
Coro1ammu-miR-3473beg:19end:39pic:3' CCGACTCGGTAGA-GAGGT 5'& ||| ||||||| |||. &5' GGCC-AGCCATCCCCTCT- 3'
DNA & RNA Element - RAID2
Gene NameRAID IDInteractor 1Category 1ID 1Interactor 2Category 2ID 2MethodsScore
Coro1aRAID00399382mmu-miR-330-5pmiRNAMIMAT0004642Coro1amRNA12721CLIP-seq//Prediction0.6308
Coro1aRAID00751132mmu-miR-320-3pmiRNAMIMAT0000666Coro1amRNA12721Reporter Assay//FACS (fluorescence-activated cell sorting)//RT-PCR//Western Blot//CLIP-seq//Prediction0.9934
Coro1aRAID01042084mmu-miR-485-5pmiRNAMIMAT0003128Coro1amRNA12721CLIP-seq//Prediction0.6308
Coro1aRAID01235939mmu-miR-326-3pmiRNAMIMAT0000559Coro1amRNA12721CLIP-seq//Prediction0.6308
Coro1aRAID02421162mmu-miR-124-3pmiRNAMIMAT0000134Coro1amRNA12721Microarray0.5483