DNA & RNA Element - miRTarBase Target Gene (Entrez ID) miRTarBase ID miRNA Species (miRNA) Target Gene Species (Target Gene) Experiments Support Type References (PMID) MIRT009730 mmu-miR-223-3p Mus musculus Ubfd1 28018 Mus musculus Sequencing Functional MTI (Weak) 19536157

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004522 mmu-miR-27b* 28018 Ubfd1 caagugguuagucgAUUCGAGa ||||||| ------------aaUAAGCUCc 2 9 1 10 [mm9:7:129212567-129212576:+] 0.6698 140 7 -8.50 -0.1431 MIMAT0000129 mmu-miR-30a* 28018 Ubfd1 cgacguUUGUAGGCUGACUUUc :|| |:| ||||||| agaaguGAC-UUCAACUGAAAu 2 17 454 474 [mm9:7:129222528-129222548:+] 0.6157 150 7 -9.47 -0.4037 MIMAT0004526 mmu-miR-101a* 28018 Ubfd1 cgUAGUCGUGACACUAUU-GACu ||| :| ||| |||| ||| aaAUCCUUAGUGU-AUAACCUGc 2 21 1375 1396 [mm9:7:129213941-129213962:+] 0.5666 122 0 -10.47 -0.4790 MIMAT0004526 mmu-miR-101a* 28018 Ubfd1 cguAGUCGUG-ACACUAU-UGACu |:| ||: || |||| |||| uucUUAACAUGUGGGAUAUACUGa 2 20 2408 2431 [mm9:7:129224482-129224505:+] 0.6111 126 0 -13.79 -0.3448 MIMAT0000137 mmu-miR-126-5p 28018 Ubfd1 gcgcaugguuuucAUUAUUAc ||||||| aagacuucugucaUAAUAAUg 2 9 1986 2006 [mm9:7:129214552-129214572:+] 0.5287 140 7 -8.38 -0.2917 MIMAT0000137 mmu-miR-126-5p 28018 Ubfd1 gcgcaugguuuucAUUAUUAc ||||||| uaaugacuuuccaUAAUAAUg 2 9 2002 2022 [mm9:7:129214568-129214588:+] 0.5287 140 7 -9.72 -0.2446 MIMAT0004530 mmu-miR-127* 28018 Ubfd1 uagucucgggagACUCGAAGUc | ||||||| ccuuucuugcagUCAGCUUCAu 2 11 205 226 [mm9:7:129222279-129222300:+] 0.7804 142 7 -12.03 -0.4738 MIMAT0004531 mmu-miR-135a* 28018 Ubfd1 gcggugccgagguuAGGGAUAu ||||||| guuuuuuuauuauuUCCCUAUg 2 9 641 662 [mm9:7:129222715-129222736:+] 0.6058 140 7 -12.61 -0.8259 MIMAT0000154 mmu-miR-142-5p 28018 Ubfd1 ucauCACGAAAGAUGAAAUAc || | | | ||||||| acacGU-CAUAC-ACUUUAUu 2 18 1006 1024 [mm9:7:129223080-129223098:+] 0.5688 141 7 -5.61 -0.1940 MIMAT0000154 mmu-miR-142-5p 28018 Ubfd1 ucaucACGAAAGAUG-AAAUAc | :|||:||| ||||| cuuucUUUUUUUUACUUUUAUu 2 17 426 447 [mm9:7:129222500-129222521:+] 0.6157 128 0 -8.43 -0.8133 MIMAT0004534 mmu-miR-145* 28018 Ubfd1 guucuuGUCAUAAAGGUC-CUUa :|||| | |||| ||| uucucuUAGUAGUGCCAGAGAAu 2 17 195 217 [mm9:7:129212761-129212783:+] 0.5587 124 0 -15.17 -0.2401 MIMAT0000161 mmu-miR-151-3p 28018 Ubfd1 ggaGUUCCUCGGAGUCAGAUc ::|| ||: ||||||| cacUGAGCUGCUCCAGUCUAu 2 19 730 750 [mm9:7:129213296-129213316:+] 0.5025 154 7 -17.62 -0.1623 MIMAT0004541 mmu-miR-188-3p 28018 Ubfd1 acgUUUGGGACGU-ACACCCUc ||| | | | ||||||| uugAAA--CAGAAUUGUGGGAa 2 19 934 953 [mm9:7:129213500-129213519:+] 0.5088 142 7 -13.63 -1.0026 MIMAT0004541 mmu-miR-188-3p 28018 Ubfd1 acguuuGGGACGUACACCCUc |:: ||||||||| auauuuCUUAACAUGUGGGAu 2 16 2404 2424 [mm9:7:129224478-129224498:+] 0.6111 151 7 -17.99 -0.5396 MIMAT0004541 mmu-miR-188-3p 28018 Ubfd1 acGUUUGGGAC--GUACAC-CCUc |||:::: | |||||| ||| ucCAAGUUUGGAACAUGUGUGGAa 2 20 263 286 [mm9:7:129222337-129222360:+] 0.7687 122 0 -16.77 -1.0163 MIMAT0004545 mmu-miR-200b* 28018 Ubfd1 agGUUAC-GACGGGUCAUUCUAc :| || :| :|| ||||||| ugUAUUGUUUAUCCUGUAAGAUu 2 21 3584 3606 [mm9:7:129225658-129225680:+] 0.7640 155 7 -14.02 -0.7525 MIMAT0000249 mmu-miR-30e* 28018 Ubfd1 cgaCAUUUGUAGGCUGACUUUc || :|| |:| ||||||| gaaGU-GAC-UUCAACUGAAAu 2 20 455 474 [mm9:7:129222529-129222548:+] 0.6157 151 7 -11.08 -0.4037 MIMAT0000367 mmu-miR-291a-5p 28018 Ubfd1 ucUCUCCCGGAGG---UGAAACUAc | :| :|||: |||||||| uuACGGAAUCUCUGAAACUUUGAUu 2 21 1080 1104 [mm9:7:129213646-129213670:+] 0.5107 147 7 -13.19 -0.5673 MIMAT0000367 mmu-miR-291a-5p 28018 Ubfd1 ucucucccggaggugAAACUAc |||||| gucuaucaauuaaagUUUGAUa 2 8 3608 3629 [mm9:7:129225682-129225703:+] 0.7640 120 6 -6.61 -0.2188 MIMAT0004573 mmu-miR-293* 28018 Ubfd1 guuUUACAGUGU-GUCAAACUCa | | |:| : | ||||||| uauACUCUUAAGUCUGUUUGAGa 2 20 293 315 [mm9:7:129222367-129222389:+] 0.7098 146 7 -11.17 -0.4966 MIMAT0004573 mmu-miR-293* 28018 Ubfd1 guuuuACAGU--GUGUCAAACUca | ||| :| ||||||| uagucUAUCAAUUAAAGUUUGAua 3 18 3606 3629 [mm9:7:129225680-129225703:+] 0.7640 132 0 -10.15 -0.1849 MIMAT0000375 mmu-miR-297a 28018 Ubfd1 ugUACGUGUACGUGUGU-AUGUa :||::::||:::||| |||| guGUGUGUGUGUGUACAGUACAg 2 21 661 683 [mm9:7:129213227-129213249:+] 0.5005 132 0 -18.26 -0.2045 MIMAT0004617 mmu-miR-148a* 28018 Ubfd1 ucagccUCACAGAGU-CUUGAAa ||| | |:| |||||| ugcuccAGUCUAUUACGAACUUu 2 17 738 760 [mm9:7:129213304-129213326:+] 0.5025 124 6 -10.77 -0.6284 MIMAT0004619 mmu-miR-200a* 28018 Ubfd1 aggucguGACAGGCCAUUCUAc :| ||| ||||||| guauuguUUAUCCUGUAAGAUu 2 16 3585 3606 [mm9:7:129225659-129225680:+] 0.7640 155 7 -14.57 -0.7598 MIMAT0004622 mmu-let-7c-1* 28018 Ubfd1 ccUUUCGAU-CUUCCAAC-AUGUc |||| | ||| ||| |||| ccAAAGAGAUGAACUUUGCUACAu 2 21 2976 2999 [mm9:7:129225050-129225073:+] 0.6160 123 0 -7.54 -0.1454 MIMAT0004626 mmu-miR-18a* 28018 Ubfd1 guCUUCCUCGUGAA-UCCC-GUCa ||| ||||:|| |||| ||| uuGAACCAGCAUUUGAGGGACAGu 2 21 797 820 [mm9:7:129213363-129213386:+] 0.5123 135 0 -21.12 -0.1250 MIMAT0004628 mmu-miR-21* 28018 Ubfd1 cuGUCGGGUAGCUGAC-GACAAc || :: : | |||| ||||| uuCAAUUGGCCCACUGCCUGUUa 2 21 1691 1713 [mm9:7:129214257-129214279:+] 0.5158 120 0 -16.50 -0.3889 MIMAT0004628 mmu-miR-21* 28018 Ubfd1 cugucggguaGCUGACGACAAc :| :||||||| auccuugugcUGUUUGCUGUUu 2 13 1335 1356 [mm9:7:129223409-129223430:+] 0.7076 144 7 -14.16 -0.2596 MIMAT0004628 mmu-miR-21* 28018 Ubfd1 cuGUCGGGUAGCUG-ACGACAAc ::| : ||| : ||||||| ggUGGAUGAUCCUUGUGCUGUUu 2 21 1327 1349 [mm9:7:129223401-129223423:+] 0.7076 143 7 -16.97 -0.1471 MIMAT0004628 mmu-miR-21* 28018 Ubfd1 cugucggguAGCUGA-CGACAAc |:|||| |||||| uauguaaucUUGACUAGCUGUUg 2 14 3563 3585 [mm9:7:129225637-129225659:+] 0.7640 125 6 -20.51 -0.9940 MIMAT0004633 mmu-miR-27a* 28018 Ubfd1 acgaguguuCGUCGAUUCGGGa | | :||||||| accaguauuGGAAUUAAGCCCu 2 14 221 242 [mm9:7:129212787-129212808:+] 0.5291 145 7 -18.59 -0.6032 MIMAT0004634 mmu-miR-31* 28018 Ubfd1 cuACCGUUAUACAA----CCGUAUCGu || || |: ||| |||||||| gaUGCCACUG-GUUACGAGGCAUAGCa 2 22 1537 1562 [mm9:7:129214103-129214128:+] 0.5561 150 7 -19.32 -0.1530 MIMAT0004636 mmu-miR-93* 28018 Ubfd1 gcCCUUCACGAUCGA-GUCGUCa |||: |:|:| | |||||| auGGAGCAGUUGGGUGCAGCAGa 2 21 40 62 [mm9:7:129212606-129212628:+] 0.6698 128 6 -19.66 -0.3245 MIMAT0000551 mmu-miR-323-3p 28018 Ubfd1 ucuccagcuGGCACAU-UACAc |:||||| |||| ccugaccuuCUGUGUACAUGUg 2 13 1252 1273 [mm9:7:129223326-129223347:+] 0.6817 120 0 -17.28 -0.2105 MIMAT0004643 mmu-miR-331-5p 28018 Ubfd1 ccuAGGGACCCUGGUAUGGAUc |:|| || |||||||| aucUUCCCCUGA-CAUACCUAu 2 20 1326 1346 [mm9:7:129213892-129213912:+] 0.5247 153 7 -19.99 -0.1583 MIMAT0000578 mmu-miR-337-3p 28018 Ubfd1 uccGUAGUAUAUCCUC-GACUu | ||||: ||||| |||| cuuCUUCAUGAAGGAGUCUGAg 2 19 432 453 [mm9:7:129212998-129213019:+] 0.5007 134 0 -20.06 -0.1862 MIMAT0004647 mmu-miR-338-5p 28018 Ubfd1 gugaGUCGUG-GUCCUAUAACAa :| ||: || ||||||| uagaUACCAUAGAGAAUAUUGUg 2 19 1033 1055 [mm9:7:129213599-129213621:+] 0.5088 149 7 -10.88 -0.2130 MIMAT0004647 mmu-miR-338-5p 28018 Ubfd1 gugaguCGUG--GUC-CUAU-AACAa |||| ||| |||| |||| uguguuGCACCUCAGUGAUAGUUGUg 2 17 1704 1729 [mm9:7:129223778-129223803:+] 0.6302 122 0 -13.50 -0.2005 MIMAT0000586 mmu-miR-340-3p 28018 Ubfd1 cgauauuUCAUU--GACUCUGCCu || || ||||||||| accuaccAGCAAUGCUGAGACGGa 2 16 320 343 [mm9:7:129222394-129222417:+] 0.6509 154 7 -22.17 -0.4181 MIMAT0000593 mmu-miR-344 28018 Ubfd1 ugUCA-GUC-CGAAAC--CGAUCU-AGu ||| ||| | ||| |||||| || acAGUACAGAGGAUUGAAGCUAGAGUCu 2 22 675 702 [mm9:7:129213241-129213268:+] 0.4966 122 0 -18.54 -0.1540 MIMAT0000595 mmu-miR-345-5p 28018 Ubfd1 uucgugaccuGAUC-CCCAGUCg ||:| ||||||| ucuuugucauCUGGUGGGUCAGu 2 13 92 114 [mm9:7:129212658-129212680:+] 0.6659 147 7 -21.03 -0.3228 MIMAT0000595 mmu-miR-345-5p 28018 Ubfd1 uucGUGACCUGAUC-CCCAGUCg :||| | |:| ||||||| gguUACU--AAUGGUGGGUCAGc 2 20 1416 1436 [mm9:7:129213982-129214002:+] 0.5757 147 7 -21.42 -0.2180 MIMAT0000595 mmu-miR-345-5p 28018 Ubfd1 uuCGUGACCUGAUCCC-CAGUCg |:| | |: :||| ||||| ugGUAGGGUAUAGGGGUGUCAGc 2 21 1897 1919 [mm9:7:129214463-129214485:+] 0.5180 120 0 -22.71 -0.2658 MIMAT0004656 mmu-miR-345-3p 28018 Ubfd1 cagaggucuggGGAUCAAGUCc :| ||||||| ugugugucuugUCAAGUUCAGa 2 12 279 300 [mm9:7:129212845-129212866:+] 0.5290 143 7 -13.02 -0.7347 MIMAT0004665 mmu-miR-218-1* 28018 Ubfd1 ccACGAACUGCCUUGGUACAAa | ||| || | ||||||| uuUCCUUUACACACCCAUGUUu 2 21 866 887 [mm9:7:129213432-129213453:+] 0.5123 160 7 -12.17 -0.2941 MIMAT0005444 mmu-miR-218-2* 28018 Ubfd1 gcgccACGAACUGUCUUGGUAc | :||| ||||||| guaauUAUUUGUAUGAACCAUu 2 18 1244 1265 [mm9:7:129213810-129213831:+] 0.5181 149 7 -12.24 -0.9681 MIMAT0004668 mmu-miR-138* 28018 Ubfd1 gggaccacAACACUUCAUCGGc ||| ||||||||| aaauaaaaUUGAGAAGUAGCCa 2 15 2229 2250 [mm9:7:129214795-129214816:+] 0.4997 162 7 -16.78 -0.3231 MIMAT0004668 mmu-miR-138* 28018 Ubfd1 gggaCCACAACACUUCA-UCGGc || || ||| ||| |||| aaugGGGGUGGUG-AGUAAGCCa 2 19 575 596 [mm9:7:129222649-129222670:+] 0.6157 124 0 -17.23 -0.4019 MIMAT0004670 mmu-miR-7a* 28018 Ubfd1 auaccgucuGACACUAAACAAc |||| ||||||| ccaaauuucCUGUAAUUUGUUg 2 14 1286 1307 [mm9:7:129213852-129213873:+] 0.5247 157 7 -14.13 -0.3133 MIMAT0004670 mmu-miR-7a* 28018 Ubfd1 auACCGUCU---GACACU-AAACAAc | ||||| ||| || |||||| gaUUGCAGAGUUCUGGGACUUUGUUc 2 21 76 101 [mm9:7:129222150-129222175:+] 0.7804 131 6 -13.73 -0.3116 MIMAT0004670 mmu-miR-7a* 28018 Ubfd1 auaccgucuGACACUAAA-CAAc || |||||| ||| auuauuuccCUAUGAUUUCGUUu 2 14 649 671 [mm9:7:129222723-129222745:+] 0.6058 121 0 -6.00 -0.5896 MIMAT0000706 mmu-miR-362-5p 28018 Ubfd1 uaagUGUGGAUCCAAGGUUCCUAa |: :|| | |:||||||| gcggAUUUCUUGAGUUCAAGGAUa 2 21 2301 2324 [mm9:7:129214867-129214890:+] 0.4996 156 7 -15.98 -0.1599 MIMAT0000742 mmu-miR-378* 28018 Ubfd1 uguguccUGGACCUCAGUCCUc ||:| |||||||| aaaguuaACUUCCAGUCAGGAu 2 16 3253 3274 [mm9:7:129225327-129225348:+] 0.6257 155 7 -15.62 -0.2693 MIMAT0004753 mmu-miR-431* 28018 Ubfd1 ucuucgggaCGU-UC-UGCUGGAc ||| || ||||||| gguuacgagGCAUAGCACGACCUa 2 14 1546 1569 [mm9:7:129214112-129214135:+] 0.5365 147 7 -18.15 -0.1050 MIMAT0001637 mmu-miR-452 28018 Ubfd1 cagaguCA-AAGGAGACGUUUGu || ||: :||||||| auugauGUCUUUGGUUGCAAACa 2 17 475 497 [mm9:7:129222549-129222571:+] 0.6157 147 7 -15.49 -0.4111 MIMAT0004758 mmu-miR-463 28018 Ubfd1 gaUGGAAUAUACCA--CAGAUAGu |:| |:|| | | ||||||| uuAUCCUGUAAGAUUAGUCUAUCa 2 21 3592 3615 [mm9:7:129225666-129225689:+] 0.7640 155 7 -14.62 -1.2182 MIMAT0004217 mmu-miR-465a-3p 28018 Ubfd1 agaugaAUCU-UUCCGGG-ACUAg |:|| |:||||| |||| ccuuucUGGACAGGGCCCAUGAUg 2 17 9 32 [mm9:7:129212575-129212598:+] 0.6698 127 0 -19.54 -0.5090 MIMAT0002111 mmu-miR-470 28018 Ubfd1 ugaguggUCACGGU-CAGGUUCUu ||| | : |||||||| cgugugaAGUACAGCGUCCAAGAa 2 17 1674 1697 [mm9:7:129223748-129223771:+] 0.6472 151 7 -16.36 -0.1488 MIMAT0004781 mmu-miR-532-3p 28018 Ubfd1 acguucggaACCCACACC-CUCc |||| |||| ||| uaugcaaaaUGGGGGUGGUGAGu 2 14 568 590 [mm9:7:129222642-129222664:+] 0.6157 121 0 -21.28 -0.1509 MIMAT0003127 mmu-miR-484 28018 Ubfd1 uagcccucCCCUGACUCGGACu ||||:|||||||| uggugcuaGGGAUUGAGCCUGu 2 15 1145 1166 [mm9:7:129213711-129213732:+] 0.4748 166 7 -30.23 -0.1882 MIMAT0003129 mmu-miR-485* 28018 Ubfd1 cucuccucucggcaCAUACUGa ||||||| aagguccuuacaagGUAUGACu 2 9 1479 1500 [mm9:7:129214045-129214066:+] 0.5757 140 7 -14.01 -0.2778 MIMAT0003170 mmu-miR-541 28018 Ubfd1 ucACACUGGUU-GUAGUCUUAGGGAa ||| |: || |||: ||||||| uuUGU-AUGAACCAUUUUAAUCCCUa 2 24 1251 1275 [mm9:7:129213817-129213841:+] 0.5181 160 7 -15.62 -1.0738 MIMAT0003186 mmu-miR-369-3p 28018 Ubfd1 uuucuaguugguACAUAAUAa |||||||| agucugaguuuuUGUAUUAUc 2 10 446 466 [mm9:7:129213012-129213032:+] 0.5007 145 7 -6.91 -0.2280 MIMAT0003189 mmu-miR-291b-5p 28018 Ubfd1 ccUCUCCCGGAGG---UGAAACUAg | :| :|||: |||||||| uuACGGAAUCUCUGAAACUUUGAUu 2 21 1080 1104 [mm9:7:129213646-129213670:+] 0.5107 147 7 -16.52 -0.5673 MIMAT0003189 mmu-miR-291b-5p 28018 Ubfd1 ccucucccggaggugAAACUAg |||||| gucuaucaauuaaagUUUGAUa 2 8 3608 3629 [mm9:7:129225682-129225703:+] 0.7640 120 6 -9.31 -0.2188 MIMAT0003190 mmu-miR-291b-3p 28018 Ubfd1 ugUUUGUUUUAC-CU-AC-GUGAAa ||:| ||||| | || ||||| ugAAGC-AAAUGAUACUGACACUUg 2 21 384 407 [mm9:7:129212950-129212973:+] 0.5290 120 0 -9.59 -0.5970 MIMAT0003376 mmu-miR-302c 28018 Ubfd1 ggugacuuuguaccUUCGUGAa ||||||| --------------AAGCACUu 2 9 1 8 [mm9:7:129222075-129222082:+] 0.8861 140 7 -12.05 -0.2785 MIMAT0003733 mmu-miR-665 28018 Ubfd1 ucCCUG---GAGUCGGAGGACCa |||| ||:: :||||||| caGGACCAGCUUGCUCUCCUGGu 2 19 1223 1245 [mm9:7:129223297-129223319:+] 0.6508 153 7 -27.52 -0.1604 MIMAT0003891 mmu-miR-770-3p 28018 Ubfd1 ggUCGAGGUGCAGUCCGGGUGc :|:|:|| | ||||||| aaGGUUUCAAUU--GGCCCACu 2 21 1686 1705 [mm9:7:129214252-129214271:+] 0.5158 149 7 -20.86 -0.2898 MIMAT0003892 mmu-miR-762 28018 Ubfd1 cgagaCAGGGCC-GGGGUCGGGg ||:: || :||||||| cuguaGUUUGGGAAUCCAGCCCa 2 18 1559 1581 [mm9:7:129223633-129223655:+] 0.6472 148 7 -26.76 -0.6506 MIMAT0003897 mmu-miR-759 28018 Ubfd1 caguuuUAACAAACGUGAGACg :| || | ||||||| uuccuuGUGGUGUACACUCUGu 2 17 3448 3469 [mm9:7:129225522-129225543:+] 0.7640 152 7 -14.25 -0.7508 MIMAT0003739 mmu-miR-673-5p 28018 Ubfd1 gagguuccuggUCUCGACACUc |||||||||| uuuuuaccuggAGAGCUGUGAg 2 12 2128 2149 [mm9:7:129214694-129214715:+] 0.5030 155 7 -25.31 -0.1479 MIMAT0003739 mmu-miR-673-5p 28018 Ubfd1 gaGGU-UCCUGGUCUCGACACUc ||| || ::: ||||||| uaCCACAGUGUU-CUGCUGUGAc 2 21 1657 1678 [mm9:7:129214223-129214244:+] 0.5158 141 7 -16.53 -0.1634 MIMAT0003740 mmu-miR-674 28018 Ubfd1 auguggugAGGGUAGAGUCACg |: || ||||||| ugccugugUUGCACCUCAGUGa 2 15 1700 1721 [mm9:7:129223774-129223795:+] 0.6302 150 7 -16.45 -0.1373 MIMAT0003741 mmu-miR-674* 28018 Ubfd1 aacAAGACUCUACC-CUCGACAc ||:| | ||| ||||||| aguUUUUUACCUGGAGAGCUGUg 2 20 2125 2147 [mm9:7:129214691-129214713:+] 0.5030 158 7 -22.12 -0.1995 MIMAT0003451 mmu-miR-677 28018 Ubfd1 agUCUUCGAUUAGUAG-UGACUu ||||| |:| | || ||||| cuAGAAG-UGA-CUUCAACUGAa 2 21 452 472 [mm9:7:129222526-129222546:+] 0.6157 124 0 -16.10 -0.7235 MIMAT0003457 mmu-miR-680 28018 Ubfd1 gggggUACAGUCGUCUACGGg || || ||||||| uuuuaAUCCCA-AAGAUGCCa 2 17 669 688 [mm9:7:129222743-129222762:+] 0.6058 142 7 -18.38 -0.6104 MIMAT0003459 mmu-miR-682 28018 Ubfd1 gucugaaGUGACACUGACGUc ||:| ||||||| uugcaaaCAUUUGGACUGCAu 2 15 489 509 [mm9:7:129222563-129222583:+] 0.6157 150 7 -14.96 -0.2668 MIMAT0003464 mmu-miR-686 28018 Ubfd1 agaaguggcagaccCUUCGUUa ||||||| agucaaaccaagcuGAAGCAAa 2 9 371 392 [mm9:7:129212937-129212958:+] 0.5290 140 7 -11.77 -0.6890 MIMAT0003464 mmu-miR-686 28018 Ubfd1 agaAGUGGCAGA-CCCUUC-GUUa | ||| |:| ||||| ||| aacUGACCAUUUCAGGAAGUCAAa 2 20 354 377 [mm9:7:129212920-129212943:+] 0.5290 122 0 -13.09 -0.1951 MIMAT0003465 mmu-miR-719 28018 Ubfd1 uugUAAAAAGA--CAU--CGG-CUCUa :||| ||| ||| ||| |||| uggGUUUCUCUUAGUAGUGCCAGAGAa 2 20 190 216 [mm9:7:129212756-129212782:+] 0.5883 121 0 -12.30 -0.7352 MIMAT0003466 mmu-miR-687 28018 Ubfd1 aguaACGACGUAAGGUC-CUAUc ||:|||| :||| |||| ccugUGUUGCACCUCAGUGAUAg 2 19 1702 1724 [mm9:7:129223776-129223798:+] 0.6302 130 0 -22.17 -0.1331 MIMAT0003470 mmu-miR-691 28018 Ubfd1 aaaaGACGGAGAGAAGUCCUUa ||| | | :|||||||| aaaaCUGAC-CAUUUCAGGAAg 2 19 352 372 [mm9:7:129212918-129212938:+] 0.5290 156 7 -17.71 -0.2262 MIMAT0003472 mmu-miR-693-5p 28018 Ubfd1 cuUUUGAAAGCCUACACCGAc ::::|||| ||||||| uuGGGUUUUC-UUUGUGGCUg 2 20 1947 1966 [mm9:7:129214513-129214532:+] 0.5392 149 7 -20.54 -0.1292 MIMAT0003472 mmu-miR-693-5p 28018 Ubfd1 cuUUUGAAAGCCUACAC-CGAc | |:|||:| :|||| ||| auAUAUUUUUGUGUGUGUGCUc 2 20 596 617 [mm9:7:129222670-129222691:+] 0.6157 131 0 -14.58 -0.4319 MIMAT0003480 mmu-miR-297b-5p 28018 Ubfd1 ugUACAAGUACGUGUGU-AUGUa :||| ::||:::||| |||| guGUGUGUGUGUGUACAGUACAg 2 21 661 683 [mm9:7:129213227-129213249:+] 0.5005 132 0 -16.18 -0.2026 MIMAT0003742 mmu-miR-455 28018 Ubfd1 cacAUAUACGGGCACCUGACg |: | | : ||||||| gguUGCAAACAUUUGGACUGc 2 19 487 507 [mm9:7:129222561-129222581:+] 0.6157 142 7 -15.71 -0.5111 MIMAT0003490 mmu-miR-700 28018 Ubfd1 ccACCUGAGCC--AAGGGCGCAc || :||: | ||||||||| agUGUGCUUAGACUUCCCGCGUu 2 20 112 134 [mm9:7:129212678-129212700:+] 0.6271 158 7 -22.63 -0.3189 MIMAT0003493 mmu-miR-703 28018 Ubfd1 aagaaaggaagACUUCCAAAa ||||||||| ugugacaguggUGAAGGUUUc 2 11 1673 1693 [mm9:7:129214239-129214259:+] 0.5158 150 7 -11.24 -0.1025 MIMAT0003494 mmu-miR-704 28018 Ubfd1 gauccUCGUCUCGUGUAC-AGa | || | |||||| || ugucaAUCAUAACACAUGCUCu 2 17 1172 1193 [mm9:7:129213738-129213759:+] 0.4834 120 0 -11.36 -0.1766 MIMAT0003496 mmu-miR-706 28018 Ubfd1 aaaaaacucuguCCCAAAGAGa ||||||||| gaagucacaaguGGGUUUCUCu 2 11 179 200 [mm9:7:129212745-129212766:+] 0.5883 150 7 -17.98 -0.1560 MIMAT0003496 mmu-miR-706 28018 Ubfd1 aaaaaacUCUGU-CCCAAAGAGa |||:: ||||||| aucccaaAGAUGCCAGUUUCUCu 2 16 674 696 [mm9:7:129222748-129222770:+] 0.6058 142 7 -12.11 -0.2942 MIMAT0003496 mmu-miR-706 28018 Ubfd1 aaaaaacucuguccCAAAGAGa ||||||| uugugcuguuugcuGUUUCUCu 2 9 1339 1360 [mm9:7:129223413-129223434:+] 0.7076 140 7 -9.60 -0.1663 MIMAT0003502 mmu-miR-712 28018 Ubfd1 ccaUGGC-GGG-CCCACUUCCUc ||:| ||| |||||||| gagACUGACCCAAAGUGAAGGAc 2 19 24 46 [mm9:7:129222098-129222120:+] 0.8332 152 7 -21.75 -0.1391 MIMAT0003504 mmu-miR-713 28018 Ubfd1 cgACA-CACGGAAGUCACGu ||| |||: |||||||| uuUGUGGUGUAUUCAGUGCc 2 18 1601 1620 [mm9:7:129223675-129223694:+] 0.6472 164 7 -19.80 -0.1645 MIMAT0003507 mmu-miR-500 28018 Ubfd1 acuUGGGAACGG--GUCCA-CGUAa ||:||| || :|||| |||| aauACUCUUCCCUUUAGGUAGCAUc 2 20 2453 2477 [mm9:7:129224527-129224551:+] 0.6111 130 0 -20.12 -0.1686 MIMAT0004236 mmu-miR-741 28018 Ubfd1 agauguAUCUUACCGUAGAGAGu | | || :||||||| gaguuuUUGUAU--UAUCUCUCc 2 18 451 471 [mm9:7:129213017-129213037:+] 0.5007 142 7 -10.76 -0.2891 MIMAT0004236 mmu-miR-741 28018 Ubfd1 agaUGU-AUCUUACCGUAGAGAGu ||| |||| |:||||||| cgaACAGUAGA---GUAUCUCUCa 2 21 819 839 [mm9:7:129222893-129222913:+] 0.6058 155 7 -19.76 -0.2644 MIMAT0004838 mmu-miR-742* 28018 Ubfd1 acuaAUCGUUGGUACACUCAu |:| :| | ||||||| uaccUGGAGAGC-UGUGAGUa 2 18 2132 2151 [mm9:7:129214698-129214717:+] 0.5030 147 7 -14.57 -0.1437 MIMAT0004838 mmu-miR-742* 28018 Ubfd1 acUAAUCGUUGGUACAC-UCAu || ||:|| |:|||| ||| gcAUAAGUAA-CGUGUGAAGUa 2 20 1664 1684 [mm9:7:129223738-129223758:+] 0.6472 129 0 -16.76 -0.1876 MIMAT0004238 mmu-miR-743a 28018 Ubfd1 agaugagucgAACCACAGAAAg ||| ||||||| aacugaaauaUUGAUGUCUUUg 2 13 466 487 [mm9:7:129222540-129222561:+] 0.6157 152 7 -12.47 -0.1664 MIMAT0004238 mmu-miR-743a 28018 Ubfd1 agaugagucgaACCACAGAAAg || ||||||| uacaugugaacUGCUGUCUUUu 2 12 1266 1287 [mm9:7:129223340-129223361:+] 0.7101 147 7 -9.94 -0.1213 MIMAT0004238 mmu-miR-743a 28018 Ubfd1 agaugagucgaaccACAGAAAg ||||||| aaggauggucccucUGUCUUUa 2 9 3220 3241 [mm9:7:129225294-129225315:+] 0.6257 140 7 -9.42 -0.3035 MIMAT0004840 mmu-miR-743b-3p 28018 Ubfd1 agauaagucguACUACAGAAAg |||||||||| aacugaaauauUGAUGUCUUUg 2 12 466 487 [mm9:7:129222540-129222561:+] 0.6157 155 7 -14.45 -0.1664 MIMAT0004840 mmu-miR-743b-3p 28018 Ubfd1 agaUA-AGUCGUACUACAGAAAg || | | | || ||||||| uacAUGUGAAC-UGCUGUCUUUu 2 20 1266 1287 [mm9:7:129223340-129223361:+] 0.7101 148 7 -10.23 -0.1225 MIMAT0004840 mmu-miR-743b-3p 28018 Ubfd1 agauaagucguacuACAGAAAg ||||||| aaggauggucccucUGUCUUUa 2 9 3220 3241 [mm9:7:129225294-129225315:+] 0.6257 140 7 -11.58 -0.3035 MIMAT0004840 mmu-miR-743b-3p 28018 Ubfd1 agauaaGUC-GUACUACA-GAAAg ||| :|||||| |||| ugaagcCAGAGGUGAUGUACUUUc 2 17 145 168 [mm9:7:129222219-129222242:+] 0.7804 123 0 -18.13 -0.3271 MIMAT0004844 mmu-miR-880 28018 Ubfd1 agaUGAG-UCUCUCC-UACC-UCAu |:|| :|| ||| |||| ||| ccaAUUCUGGAAAGGUAUGGAAGUg 2 20 305 329 [mm9:7:129212871-129212895:+] 0.5290 125 0 -18.77 -0.1503 MIMAT0004863 mmu-miR-220 28018 Ubfd1 uucACAGAC-UGUGACAC-CACc || ||| :|:|||| ||| ucaUGCCUGUUUAUUGUGUGUGu 2 19 624 646 [mm9:7:129213190-129213212:+] 0.5002 121 0 -16.40 -0.1838 MIMAT0004863 mmu-miR-220 28018 Ubfd1 uucacAGACU--GUGACACCACc ||||| :: ||||||| uucaaUCUGAGGUGAUGUGGUGa 2 17 121 143 [mm9:7:129222195-129222217:+] 0.7804 151 7 -18.11 -0.5562 MIMAT0004863 mmu-miR-220 28018 Ubfd1 uucACAGACUGUGACACCACc |||:| | :||||||| cuaUGUUU--CCUUGUGGUGu 2 19 3442 3460 [mm9:7:129225516-129225534:+] 0.7640 151 7 -15.21 -0.5292 MIMAT0004863 mmu-miR-220 28018 Ubfd1 uucacAGACUG--UGACACCACc ||| :| :||||||| cagccUCUUGCUUUUUGUGGUGu 2 17 1588 1610 [mm9:7:129223662-129223684:+] 0.6472 143 7 -15.32 -0.2827 MIMAT0004865 mmu-miR-297c 28018 Ubfd1 ugUACAUGUACGUGUGU-AUGUa :|||:::||:::||| |||| guGUGUGUGUGUGUACAGUACAg 2 21 661 683 [mm9:7:129213227-129213249:+] 0.5005 136 0 -19.05 -0.2026 MIMAT0004868 mmu-miR-343 28018 Ubfd1 agacCCGUGUAC--UUCCCUCu ||| : || ||||||| auaaGGCCUUUGUAAAGGGAGa 2 17 138 159 [mm9:7:129212704-129212725:+] 0.5883 147 7 -17.90 -0.3972 MIMAT0004872 mmu-miR-465b-3p 28018 Ubfd1 agaugaAUCU-UUCCGGG-ACUAg |:|| |:||||| |||| ccuuucUGGACAGGGCCCAUGAUg 2 17 9 32 [mm9:7:129212575-129212598:+] 0.6698 127 0 -19.54 -0.5090 MIMAT0004874 mmu-miR-465c-3p 28018 Ubfd1 agaugaAUCU-UUCCGGG-ACUAg |:|| |:||||| |||| ccuuucUGGACAGGGCCCAUGAUg 2 17 9 32 [mm9:7:129212575-129212598:+] 0.6698 127 0 -19.54 -0.5090 MIMAT0004888 mmu-miR-493 28018 Ubfd1 ggaccgugugucaucCUGGAAGu ||||||| ccugguuuuagcccuGACCUUCu 2 9 1240 1262 [mm9:7:129223314-129223336:+] 0.6817 140 7 -22.69 -0.2109 MIMAT0004891 mmu-miR-509-3p 28018 Ubfd1 gguaaugucuuuACAGUUAGu |||||||| agccugugaccuUGUCAAUCa 2 10 1160 1180 [mm9:7:129213726-129213746:+] 0.4748 145 7 -14.47 -0.4615 MIMAT0004897 mmu-miR-654-5p 28018 Ubfd1 ugUGUACAAGACGUCG-AAUGGu ||| |||| |||| ||||| cuACA-GUUC--CAGCUUUACCa 2 21 1758 1777 [mm9:7:129214324-129214343:+] 0.5293 127 0 -19.92 -0.1632 MIMAT0004930 mmu-miR-466d-5p 28018 Ubfd1 guacauguACAUGCGUGUGUGu ||| | ||||||| ugggacuuUGUUCACACACACa 2 15 89 110 [mm9:7:129222163-129222184:+] 0.7804 154 7 -17.21 -0.8190 MIMAT0004862 mmu-miR-877* 28018 Ubfd1 acccuccucccucUUCUCCUGu |||||||| ccggugucauuucAAGAGGACc 2 10 2088 2109 [mm9:7:129224162-129224183:+] 0.6330 145 7 -12.84 -0.1882 MIMAT0005292 mmu-miR-582-3p 28018 Ubfd1 aacccaAGUCA-ACAAGUUGUCc || || | |||||||| auuuacUCUGUAUCUUCAACAGa 2 17 763 785 [mm9:7:129213329-129213351:+] 0.5123 155 7 -10.61 -0.3280 MIMAT0005830 mmu-miR-466l 28018 Ubfd1 uuauacacacguacAUAAAUAu ||||||| ccaauuaaugacaaUAUUUAUg 2 9 1522 1543 [mm9:7:129223596-129223617:+] 0.6472 140 7 -5.25 -0.2220 MIMAT0005831 mmu-miR-669k 28018 Ubfd1 aaCGUACGCAC-AUAUACGUAu || | | || |||||||| caGC-UACCUGAAAUAUGCAUc 2 20 73 93 [mm9:7:129212639-129212659:+] 0.6659 148 7 -9.20 -0.6069 MIMAT0005831 mmu-miR-669k 28018 Ubfd1 aacgUAC-GCACAUAUACGUAu :|| | || ||||||| uucaGUGCCAAGU-UAUGCAUc 2 18 1612 1632 [mm9:7:129223686-129223706:+] 0.6472 142 7 -10.03 -0.1252 MIMAT0005832 mmu-miR-669g 28018 Ubfd1 uaGUACAGUUGUGUA-UGU-UACGu | ||||||: ||| ||| |||| acCUUGUCAAU-CAUAACACAUGCu 2 22 1168 1191 [mm9:7:129213734-129213757:+] 0.4834 134 0 -15.33 -0.1324 MIMAT0005834 mmu-miR-466i 28018 Ubfd1 auCACACAUACACACACACAUa ||||||:|||||||||||| guGUGUGUGUGUGUGUGUGUAc 2 21 655 676 [mm9:7:129213221-129213242:+] 0.5005 196 7 -35.44 -0.1018 MIMAT0005834 mmu-miR-466i 28018 Ubfd1 auCACACAUACACACAC-ACAUa | || | ||| |||| |||| cgGGGUAUUUGUUUGUGUUGUAc 2 21 1121 1143 [mm9:7:129213687-129213709:+] 0.4662 132 0 -12.11 -0.1023 MIMAT0005835 mmu-miR-1-2-as 28018 Ubfd1 accuuacauuucuUCAUACAu ||||||| uagguagcauccuAGUAUGUu 2 9 2467 2487 [mm9:7:129224541-129224561:+] 0.6111 140 7 -10.03 -0.2902 MIMAT0005839 mmu-miR-669f 28018 Ubfd1 uaugCACACACACAUACAU-AUAc || || || | |||| ||| aggaGUCUGAGUUUUUGUAUUAUc 2 20 443 466 [mm9:7:129213009-129213032:+] 0.5007 127 0 -6.01 -0.2058 MIMAT0005842 mmu-miR-669h-3p 28018 Ubfd1 acacguacacacaUAUACGUAu |||||||| acagcuaccugaaAUAUGCAUc 2 10 72 93 [mm9:7:129212638-129212659:+] 0.6659 145 7 -10.40 -0.6069 MIMAT0005842 mmu-miR-669h-3p 28018 Ubfd1 acACGUA---CACACAU--AUACGUAu ||:|| ||| | ||||||| ggUGUAUUCAGUGCCAAGUUAUGCAUc 2 21 1606 1632 [mm9:7:129223680-129223706:+] 0.6472 142 7 -14.78 -0.1378 MIMAT0005845 mmu-miR-466k 28018 Ubfd1 aguguacauguACAUGUGUGUGu ||| ||||||| uucugggacuuUGUUCACACACa 2 13 86 108 [mm9:7:129222160-129222182:+] 0.7804 152 7 -17.45 -0.6136 MIMAT0005846 mmu-miR-467f 28018 Ubfd1 acauccacacacaCACAUAUa ||||||| ugucaaauccuuaGUGUAUAa 2 9 1371 1391 [mm9:7:129213937-129213957:+] 0.5666 140 7 -7.06 -0.8222 MIMAT0005849 mmu-miR-1191 28018 Ubfd1 aucccGAU-GUAUCAUU-CUGAc ||: |||| ||| |||| gacuuCUGUCAUAAUAAUGACUu 2 17 1988 2010 [mm9:7:129214554-129214576:+] 0.5287 123 0 -9.42 -0.2338 MIMAT0005849 mmu-miR-1191 28018 Ubfd1 aucCCGAUGUAUCAUUC-UGAc | | |:|| ||||| ||| ucuGACAAUAU-GUAAGUACUa 2 19 3424 3444 [mm9:7:129225498-129225518:+] 0.7640 120 0 -10.43 -0.7824 MIMAT0005851 mmu-miR-1193 28018 Ubfd1 cuaucAUUUUGCCCACUGGAu | :|:| ||||||| agggaUUGAGCCUGUGACCUu 2 17 1152 1172 [mm9:7:129213718-129213738:+] 0.4748 148 7 -16.22 -0.1247 MIMAT0005853 mmu-miR-669e 28018 Ubfd1 uaCUUGUACGU-GUGUGU-UCUGu |:: || || | |||| |||| uuGGGAAUCCAGCCCACAUAGACa 2 21 1566 1589 [mm9:7:129223640-129223663:+] 0.6472 123 0 -16.53 -0.1972 MIMAT0005858 mmu-miR-1197 28018 Ubfd1 ucuucaUCUGGUACACAGGAu || :|| ||||||| gcguucAGUUCAAGUGUCCUu 2 16 1105 1125 [mm9:7:129223179-129223199:+] 0.6617 155 7 -15.77 -0.4379 MIMAT0005859 mmu-miR-1198 28018 Ubfd1 gguUCGGUCGGUCCUUGUGUAu ||:| |: ||||||||| cuuAGUCUGU--GGAACACAUc 2 20 2168 2187 [mm9:7:129214734-129214753:+] 0.5004 156 7 -19.41 -0.1820 MIMAT0005859 mmu-miR-1198 28018 Ubfd1 gguuCGGUCGGUCCUUGUGUAu |:|| :|| ||||||| ccuuGUCAAUCA-UAACACAUg 2 19 1169 1189 [mm9:7:129213735-129213755:+] 0.4834 152 7 -18.85 -0.1462 MIMAT0007863 mmu-miR-1902 28018 Ubfd1 uucaguACGG--AUGACGUGGAGa |||| |::|||||||| agaaacUGCCUGUGUUGCACCUCa 2 17 1694 1717 [mm9:7:129223768-129223791:+] 0.6302 159 7 -24.52 -0.4655 MIMAT0007864 mmu-miR-1897-5p 28018 Ubfd1 ggGGGA-GAAAGAGGUAGGUUUc |||| | | : ||||||| auCCCUACAUAUGGAAUCCAAAu 2 21 1269 1291 [mm9:7:129213835-129213857:+] 0.5247 147 7 -15.69 -0.3768 MIMAT0007867 mmu-miR-1895 28018 Ubfd1 aggaggagCAGGAGGAGCCCCc | ::||||||||| ucaaaacaGCUUUCCUCGGGGu 2 15 1105 1126 [mm9:7:129213671-129213692:+] 0.4885 154 7 -23.89 -0.2925 MIMAT0007872 mmu-miR-1906 28018 Ubfd1 ucggGACGGAGUCCGACGACGu |||::|| ||||||| uuugCUGUUUC--UCUGCUGCu 2 19 1347 1366 [mm9:7:129223421-129223440:+] 0.7076 151 7 -21.97 -0.2857 MIMAT0007873 mmu-miR-1896 28018 Ubfd1 gaGGAGU-GGGUGGUAGUCUCUc |:|:| |||| ||||||| ucCUUUAUCCCAGGUUCAGAGAu 2 21 1121 1143 [mm9:7:129223195-129223217:+] 0.6617 159 7 -22.57 -0.1221 MIMAT0007876 mmu-miR-1907 28018 Ubfd1 ugGAGGUCUAGGAGACGACGAg :| | | |:|||||||||| guUUGCUGUUUCUCUGCUGCUg 2 21 1346 1367 [mm9:7:129223420-129223441:+] 0.7076 168 7 -23.17 -0.1496 MIMAT0007876 mmu-miR-1907 28018 Ubfd1 ugGAG--GUCUAGGA---GACGACGAg ||| :|| |||| :||||||| ucCUCAGUAGCUCCUUAGUUGCUGCUu 2 21 2936 2962 [mm9:7:129225010-129225036:+] 0.6160 154 7 -26.02 -0.1015 MIMAT0007878 mmu-miR-1894-3p 28018 Ubfd1 gaGGGAAGU--GGGAGAGGGAACg || |||| ||: :||||||| uaCCAUUCAGGCCUGUUCCCUUGg 2 21 3194 3217 [mm9:7:129225268-129225291:+] 0.6257 163 7 -23.35 -0.1234 MIMAT0007878 mmu-miR-1894-3p 28018 Ubfd1 gaGGGAAGUGGGAGAGGGA-ACg :::||:|:: |:||||| || guUUUUUUAUUAUUUCCCUAUGa 2 21 641 663 [mm9:7:129222715-129222737:+] 0.6058 128 0 -17.93 -1.0522 MIMAT0009390 mmu-miR-1927 28018 Ubfd1 agUCAGGGAUUGUAGGUCUCCAg :|| ||:| | |||||||| guGGUGACUGA-AGCCAGAGGUg 2 22 137 158 [mm9:7:129222211-129222232:+] 0.7804 159 7 -22.03 -0.2757 MIMAT0009390 mmu-miR-1927 28018 Ubfd1 agucAGGGAU---UGUAG--GUCUCCAg |:|||| || || ||||||| accuUUCCUACAGACUUCUGCAGAGGUa 2 20 3396 3423 [mm9:7:129225470-129225497:+] 0.7110 153 7 -20.08 -0.3146 MIMAT0009392 mmu-miR-1929 28018 Ubfd1 gagacGAGAUAUUUCAGGAUCUu :|:||| ||||||| uuuacUUUUAU-UUUUCCUAGAa 2 19 436 457 [mm9:7:129222510-129222531:+] 0.6157 144 7 -14.49 -0.8563 MIMAT0009398 mmu-miR-1934 28018 Ubfd1 ucuccugcuucguccCCUGGUCu ||||||| gauaaguugcuuucaGGACCAGc 2 9 1210 1232 [mm9:7:129223284-129223306:+] 0.6508 140 7 -13.83 -0.2031 MIMAT0009406 mmu-miR-1941-3p 28018 Ubfd1 uacCCUCUAUGAC-GAUUCUAc | | :||:|| ||||||| uucGCAUGUAUUGCCUAAGAUg 2 19 1485 1506 [mm9:7:129223559-129223580:+] 0.6472 157 7 -16.17 -0.1549 MIMAT0009408 mmu-miR-1943 28018 Ubfd1 agguccacGGGUCUAGGAGGGAa :|| |||||||| ucaugccuUCCUUUUCCUCCCUg 2 16 2695 2717 [mm9:7:129224769-129224791:+] 0.5556 147 7 -21.74 -0.1104 MIMAT0009411 mmu-miR-1306 28018 Ubfd1 guAGUGGUGGUCUCGGU-UGCa |::||| :| ||||| ||| gcUUGCCA-UAUAGCCACACGu 2 20 991 1011 [mm9:7:129223065-129223085:+] 0.5688 125 0 -17.88 -0.1277 MIMAT0009415 mmu-miR-1948 28018 Ubfd1 gacAUGCUCACGAGACGGAUUu | || ||: :||||||| guaUUCGCAUGUAUUGCCUAAg 2 20 1482 1503 [mm9:7:129223556-129223577:+] 0.6472 155 7 -16.75 -0.2645 MIMAT0009416 mmu-miR-1949 28018 Ubfd1 uugauacGACUGUAGGACCAU-AUc || || ||:||||| || cuagaguCUUAC-UCUUGGUAGUAg 2 18 694 717 [mm9:7:129213260-129213283:+] 0.4966 123 0 -16.49 -0.1571 MIMAT0009417 mmu-miR-1950 28018 Ubfd1 acUGGUAUAGGAAUCU-ACGUCu :| : |||| |:|| ||||| ccGCAGCAUCCCUGGAUUGCAGa 2 21 62 84 [mm9:7:129222136-129222158:+] 0.7804 128 0 -18.72 -0.1914 MIMAT0009424 mmu-miR-1953 28018 Ubfd1 gucUUCGGACUCU--UGA-AAGGGu :||| | :|| ||| ||||| uguGAGCAUUGGAAUACUCUUCCCu 2 20 2441 2465 [mm9:7:129224515-129224539:+] 0.6111 122 0 -15.37 -0.2708 MIMAT0009425 mmu-miR-1954 28018 Ubfd1 uugucccagaguGAGACGUCa :||||||| uuuccuacagacUUCUGCAGa 2 10 3399 3419 [mm9:7:129225473-129225493:+] 0.7110 141 7 -14.36 -0.5084 MIMAT0009425 mmu-miR-1954 28018 Ubfd1 uuGUCCCAGAGUGAG-ACGUCa | || || | :|| ||||| caCCGGUUCCCUUUCUUGCAGu 2 20 196 217 [mm9:7:129222270-129222291:+] 0.7804 123 0 -15.07 -0.5684 MIMAT0009426 mmu-miR-1955 28018 Ubfd1 uuuucGACGUCACGU---AGGACCCUGa ||| | |||| |:||||||| cauccCUGGAUUGCAGAGUUCUGGGACu 2 21 68 95 [mm9:7:129222142-129222169:+] 0.7804 163 7 -28.21 -0.3869 MIMAT0009427 mmu-miR-669n 28018 Ubfd1 uguGUGUAGGUGUGUGUUUa |||| |||||||||| guuCACA--CACACACAAAu 2 18 98 115 [mm9:7:129222172-129222189:+] 0.7804 162 7 -19.72 -0.4242 MIMAT0009431 mmu-miR-1958 28018 Ubfd1 ugaauGACGAAGGUGAAAGGAu :| ||| | ||||||| gaaccUUCCUUAC-CUUUCCUa 2 18 3385 3405 [mm9:7:129225459-129225479:+] 0.6581 151 7 -17.86 -0.2745 MIMAT0009435 mmu-miR-1962 28018 Ubfd1 uacaCAGG-GUCACGGUCGGAGa | || || | ||||||| uccaGCCCACAUAGACAGCCUCu 2 19 1573 1595 [mm9:7:129223647-129223669:+] 0.6472 149 7 -22.09 -0.2165 MIMAT0009446 mmu-miR-1971 28018 Ubfd1 agAGUCGGGU--CGGA-AAUg |::||||| |||| ||| aaUUGGCCCACUGCCUGUUAa 2 17 1694 1714 [mm9:7:129214260-129214280:+] 0.5158 123 0 -15.39 -0.2346 MIMAT0009457 mmu-miR-1839-3p 28018 Ubfd1 cgACA-ACCAUCUAU-UCAUCCAGa ||| | | | | |||||||| ucUGUAUCUUCAACAGAGUAGGUCu 2 22 769 793 [mm9:7:129213335-129213359:+] 0.5123 147 7 -18.48 -0.1131 MIMAT0009458 mmu-miR-1981 28018 Ubfd1 cggUGCAGAUUCGGGUCGGAA-AUg ::|| ||| || ||||| || uuaGUGUAUAA--CCUGCCUUGUAa 2 22 1381 1403 [mm9:7:129213947-129213969:+] 0.5904 122 0 -12.49 -0.7745 MIMAT0009459 mmu-miR-1982* 28018 Ubfd1 ggaggggUCCUGGGAGGGUu || | ||||||| uuuggugAGAAACCUCCCAg 2 14 1413 1432 [mm9:7:129223487-129223506:+] 0.7076 149 7 -18.47 -0.1110 MIMAT0009460 mmu-miR-1982.1 28018 Ubfd1 gacacCCUCUUGUAUCCCAC-UCu |||| | :| ||||| || uguauGGAGCA-GUUGGGUGCAGc 2 19 37 59 [mm9:7:129212603-129212625:+] 0.6698 120 0 -19.03 -0.2497 MIMAT0009461 mmu-miR-1982.2 28018 Ubfd1 gacACCCUCUUGUAU-CCCACu ||| ||:::||| ||||| uaaUGGUAGGGUAUAGGGGUGu 2 19 1894 1915 [mm9:7:129214460-129214481:+] 0.5180 134 0 -22.22 -0.2485 MIMAT0011212 mmu-miR-2136 28018 Ubfd1 guguAGAGUCAGU-UGUGGGUc |:|| |:| ||||||| ugguUUUCCUUUACACACCCAu 2 18 862 883 [mm9:7:129213428-129213449:+] 0.5123 152 7 -13.23 -0.3285 MIMAT0011214 mmu-miR-2138 28018 Ubfd1 uaaggcGGUUCGGGCAAGGGAa :||:|||:||||||| uaccauUCAGGCCUGUUCCCUu 2 17 3194 3215 [mm9:7:129225268-129225289:+] 0.6257 168 7 -31.91 -0.1313 MIMAT0011214 mmu-miR-2138 28018 Ubfd1 uaaggcgguucGGGCAAGGGAa || ||||||| acuuaaaaucaCCGGUUCCCUu 2 12 187 208 [mm9:7:129222261-129222282:+] 0.7804 147 7 -18.57 -0.3852 MIMAT0011222 mmu-miR-2146 28018 Ubfd1 guguaccuUGGGAAGAGGUg |: |||||||| uuugaauuAUGCUUCUCCAu 2 13 1068 1087 [mm9:7:129223142-129223161:+] 0.6153 148 7 -15.04 -0.1104 MIMAT0011287 mmu-miR-2183 28018 Ubfd1 uccUCCA-GUCCCCA-AGUu :||| :|||||| ||| guaGGGUAUAGGGGUGUCAg 2 16 1899 1918 [mm9:7:129214465-129214484:+] 0.5180 122 0 -20.58 -0.2157 MIMAT0012773 mmu-miR-767 28018 Ubfd1 acGAGUCUGUUGGUACCACGu :|:| ::|| ||||||| auUUUAAGUAA-AAUGGUGCu 2 20 2131 2150 [mm9:7:129224205-129224224:+] 0.6460 149 7 -14.12 -0.7211 MIMAT0012773 mmu-miR-767 28018 Ubfd1 acgagUCUGUUGGUACCACgu || ||: :|||||| uuuaaAGUCAG-UAUGGUGga 3 17 233 252 [mm9:7:129222307-129222326:+] 0.7745 130 0 -13.27 -0.1187 MIMAT0015640 mmu-miR-3470a 28018 Ubfd1 ggUCGGACCAGAUGUUUCACu || ||| | ||||||| ggAGACUGACC--CAAAGUGa 2 20 23 41 [mm9:7:129222097-129222115:+] 0.8332 148 7 -14.07 -0.2107 MIMAT0015641 mmu-miR-3470b 28018 Ubfd1 ggUCGGACCA-GAUGUCUCACu ||:: ||| | :||||||| gcAGUUGGGUGCAGCAGAGUGg 2 20 45 66 [mm9:7:129212611-129212632:+] 0.6698 158 7 -24.74 -0.1218 MIMAT0015644 mmu-miR-1186b 28018 Ubfd1 caccACGUAC--GG--AAAUUAGGGu ||:||| || ||||||||| uauuUGUAUGAACCAUUUUAAUCCCu 2 19 1249 1274 [mm9:7:129213815-129213840:+] 0.5181 160 7 -19.20 -0.8329 MIMAT0015644 mmu-miR-1186b 28018 Ubfd1 caccacGUACGGAAAUU-AGGGu | ||:|| ||| |||| aauccuCUUGUCUCUAACUCCCu 2 17 575 597 [mm9:7:129213141-129213163:+] 0.5002 124 0 -12.41 -0.2005 MIMAT0015644 mmu-miR-1186b 28018 Ubfd1 caccACGUACG-GAAAUUAGGGu || | | :||||||||| ccuaUGAUUUCGUUUUAAUCCCa 2 19 657 679 [mm9:7:129222731-129222753:+] 0.6058 153 7 -15.75 -0.8855 MIMAT0015645 mmu-miR-3473 28018 Ubfd1 ccGACUCGGUAGAGAGGu :|| ::|||||||| uuUUGUAUUAUCUCUCCu 2 17 455 472 [mm9:7:129213021-129213038:+] 0.5007 152 7 -17.82 -0.4103 MIMAT0015646 mmu-miR-3474 28018 Ubfd1 cuUAGGUG--CAGAG---GAGGG-UCCc |||| | ||||| ||||| ||| caAUCCUCUUGUCUCUAACUCCCUAGGu 2 21 574 601 [mm9:7:129213140-129213167:+] 0.5002 126 0 -27.05 -0.1824 MIMAT0015646 mmu-miR-3474 28018 Ubfd1 cuUAGGUGCAGAGG----AGGGUCCc :|:|| || ||| ||||||| caGUUCAAGUGUCCUUUAUCCCAGGu 2 21 1110 1135 [mm9:7:129223184-129223209:+] 0.6617 155 7 -24.32 -0.3507 MIMAT0015646 mmu-miR-3474 28018 Ubfd1 cuuagGUGCAGAGGAGG-GUCCc :|:||:|::||| |||| ccuagUAUGUUUUUUCCUCAGGa 2 18 2477 2499 [mm9:7:129224551-129224573:+] 0.6111 129 0 -22.58 -0.8781 MIMAT0000124 mmu-miR-15b 28018 Ubfd1 acauuugguacuACACGACGAu | ||||||| guuugcuguuucUCUGCUGCUg 2 11 1346 1367 [mm9:7:129223420-129223441:+] 0.7076 142 7 -13.84 -0.1510 MIMAT0000125 mmu-miR-23b 28018 Ubfd1 ccauuagggaccgUUACACUa ||||||| uaccuaugaagaaAAUGUGAg 2 9 1340 1360 [mm9:7:129213906-129213926:+] 0.5264 140 7 -10.90 -0.4064 MIMAT0000125 mmu-miR-23b 28018 Ubfd1 ccAUUAG-GGAC-CGU-UACACUa |:| | :||| |:| |||||| ccUGACCUUCUGUGUACAUGUGAa 2 20 1252 1275 [mm9:7:129223326-129223349:+] 0.6817 121 6 -13.33 -0.4645 MIMAT0000127 mmu-miR-29b 28018 Ubfd1 uuguGAC-UAAAGUUUACCACGAu :|| :|| :| ||||||| uuguUUGUGUUGUACUUGGUGCUa 2 20 1129 1152 [mm9:7:129213695-129213718:+] 0.4662 150 7 -14.85 -0.3194 MIMAT0000127 mmu-miR-29b 28018 Ubfd1 uuguGACUAAAGUUUACCACGAu :| | | |||||||||| uuauUUUAAGUAAAAUGGUGCUu 2 20 2129 2151 [mm9:7:129224203-129224225:+] 0.6460 159 7 -14.95 -0.7210 MIMAT0000127 mmu-miR-29b 28018 Ubfd1 uuguGACUAAAGUUUACCAC-GAu |||| | | :||||| || caauCUGAGGUGAUGUGGUGACUg 2 20 123 146 [mm9:7:129222197-129222220:+] 0.7804 123 0 -16.50 -0.2863 MIMAT0000127 mmu-miR-29b 28018 Ubfd1 uuGUG-ACUAAAGUUUAC-CACGAu ||: | |||:: :|| ||||| gcCAUAUAUUUUUGUGUGUGUGCUc 2 22 593 617 [mm9:7:129222667-129222691:+] 0.6157 120 0 -10.94 -0.4351 MIMAT0000128 mmu-miR-30a 28018 Ubfd1 gaaggucagcuccUACAAAUGu |||||||| ccuuuacacacccAUGUUUACu 2 10 869 890 [mm9:7:129213435-129213456:+] 0.5105 145 7 -8.60 -0.3767 MIMAT0000130 mmu-miR-30b 28018 Ubfd1 ucgacucacauccUACAAAUGu |||||||| ccuuuacacacccAUGUUUACu 2 10 869 890 [mm9:7:129213435-129213456:+] 0.5105 145 7 -7.08 -0.3827 MIMAT0000134 mmu-miR-124 28018 Ubfd1 ccgUAAGUGGCGCAC-GGAAu ||| | | :||| |||| gggAUUGAGCCUGUGACCUUg 2 18 1153 1173 [mm9:7:129213719-129213739:+] 0.4748 121 0 -17.70 -0.1126 MIMAT0000145 mmu-miR-133a 28018 Ubfd1 gucgaccAACUUCCCCUGGUUu || ||| ||||||| gugucauUUCAAGAGGACCAAa 2 16 2091 2112 [mm9:7:129224165-129224186:+] 0.6330 159 7 -14.54 -0.2863 MIMAT0000147 mmu-miR-135a 28018 Ubfd1 agUGUAUCCUUA----UUUUUCGGUAu | ||:||::| |: ||||||| caAAAUGGGGGUGGUGAGUAAGCCAUa 2 22 572 598 [mm9:7:129222646-129222672:+] 0.6157 152 7 -21.62 -0.4675 MIMAT0000148 mmu-miR-136 28018 Ubfd1 gguaGUAGUUUUGUUUAC-CUCa :|| ||:| ||||| ||| uaccUAUGAAGA-AAAUGUGAGa 2 19 1340 1361 [mm9:7:129213906-129213927:+] 0.5264 124 0 -12.14 -0.5528 MIMAT0000153 mmu-miR-141 28018 Ubfd1 ggUAGAAAUGGUCUGUCACAAu | | |||| |||||||| gcAACCCUACC--ACAGUGUUc 2 21 1650 1669 [mm9:7:129214216-129214235:+] 0.5158 153 7 -15.58 -0.2154 MIMAT0000155 mmu-miR-142-3p 28018 Ubfd1 agGUAUUUCAUCCUUUGU-GAUGu || |: | || :||| |||| agCAGAGUGGAGUUGACAGCUACc 2 22 57 80 [mm9:7:129212623-129212646:+] 0.6679 121 0 -13.66 -0.3751 MIMAT0000156 mmu-miR-144 28018 Ubfd1 ucauguaGUAGAUAUGACAu | | ||||||| uucuuggCUUGAAUACUGUc 2 14 1849 1868 [mm9:7:129223923-129223942:+] 0.5731 141 7 -7.10 -0.1165 MIMAT0000158 mmu-miR-146a 28018 Ubfd1 uuGGGUACCUUAAGUC-AAGAGu |||| || ||| ||||| auCCCAAAGAUGCCAGUUUCUCu 2 21 674 696 [mm9:7:129222748-129222770:+] 0.6058 124 0 -16.92 -0.2510 MIMAT0000160 mmu-miR-150 28018 Ubfd1 gugaccauguucCCAACCCUCu | ||||||| aucaaaacgccuGUUUGGGAGg 2 11 3486 3507 [mm9:7:129225560-129225581:+] 0.7640 142 7 -15.61 -0.3996 MIMAT0000160 mmu-miR-150 28018 Ubfd1 guGACCAU-GUUCCCAACC-CUCu || || :|||| |||| ||| cuCUCAUAGUAAGGUUUGGUGAGa 2 21 1399 1422 [mm9:7:129223473-129223496:+] 0.7076 127 0 -17.35 -0.2178 MIMAT0000162 mmu-miR-152 28018 Ubfd1 gguucaagacaGUACGUGACu | ||||||| uagauaagaagCCUGCACUGa 2 11 715 735 [mm9:7:129213281-129213301:+] 0.4928 142 7 -14.67 -0.1160 MIMAT0000162 mmu-miR-152 28018 Ubfd1 gguucAAGACAGUAC-GUGACu ||: || ||| ||||| uuugcUUUGGUGAUGCCACUGg 2 17 1526 1547 [mm9:7:129214092-129214113:+] 0.5561 124 0 -14.09 -0.3552 MIMAT0000162 mmu-miR-152 28018 Ubfd1 gguUCAAG--ACAGUACGU-GACu ||| | ||:||||| ||| uucAGUGCCAAGUUAUGCAUCUGg 2 19 1612 1635 [mm9:7:129223686-129223709:+] 0.6472 121 0 -19.83 -0.2224 MIMAT0000164 mmu-miR-154 28018 Ubfd1 gcuuccguugUGCCUAUUGGAu ::| ||||||| caaauccuuaGUGUAUAACCUg 2 13 1374 1395 [mm9:7:129213940-129213961:+] 0.5666 144 7 -10.90 -0.2801 MIMAT0000209 mmu-miR-129-5p 28018 Ubfd1 cguucgggUCUGGCGUUUUUc | | :||||||| uuuccauaAUAAUGCAAAAAu 2 14 2009 2029 [mm9:7:129214575-129214595:+] 0.5287 145 7 -10.01 -0.5526 MIMAT0000211 mmu-miR-182 28018 Ubfd1 gccacACUCAAGAUGGU-----AACGGUUu ||| | ||::|| ||||||| uggcuUGAAUACUGUCAUUUGUUUGCCAAu 2 21 1853 1882 [mm9:7:129223927-129223956:+] 0.5731 151 7 -17.87 -0.1496 MIMAT0000211 mmu-miR-182 28018 Ubfd1 gcCACACUC-AAGA-U-GGUA-ACGGUUu || ||:| ||:| | |||| |||||| agGU-UGGGCUUUUCACCCAUCUGCCAAc 2 24 3149 3176 [mm9:7:129225223-129225250:+] 0.6257 130 6 -20.11 -0.3246 MIMAT0000212 mmu-miR-183 28018 Ubfd1 ucACUUAAG-A-UGGU-CACGGUAu |||:||: | ::|| ||||||| ucUGAGUUUAUGGUCAUGUGCCAUc 2 21 601 625 [mm9:7:129213167-129213191:+] 0.5002 157 7 -18.43 -0.1613 MIMAT0000214 mmu-miR-185 28018 Ubfd1 agUCCUUGACGGAA-AGAGAGGu || :||: || ||||||| ugAGUUUUUGUAUUAUCUCUCCu 2 21 450 472 [mm9:7:129213016-129213038:+] 0.5007 151 7 -15.12 -0.4103 MIMAT0000215 mmu-miR-186 28018 Ubfd1 ucggguuuuCCUCUUAAGAAAc | | |||||||| auuauuucuGUACAAUUCUUUc 2 14 2499 2520 [mm9:7:129224573-129224594:+] 0.6111 149 7 -6.30 -0.1594 MIMAT0000225 mmu-miR-195 28018 Ubfd1 cgguuAUAAAGACACGACGAu |:||||| ||||||| uuugcUGUUUCUCUGCUGCUg 2 17 1347 1367 [mm9:7:129223421-129223441:+] 0.7076 168 7 -19.36 -0.1467 MIMAT0000233 mmu-miR-200b 28018 Ubfd1 aguagUAAUGGUCCGUCAUAAu | ||: | ||||||| cagagAAUAUGA-CCAGUAUUg 2 18 210 230 [mm9:7:129212776-129212796:+] 0.5587 143 7 -8.80 -0.1940 MIMAT0000236 mmu-miR-203 28018 Ubfd1 gaucaccagGAUUUGUAAAGUg ||:| ||||||| ccccuaaaaCUGACCAUUUCAg 2 14 347 368 [mm9:7:129212913-129212934:+] 0.5290 153 7 -10.99 -0.1136 MIMAT0000236 mmu-miR-203 28018 Ubfd1 gaucaCCAGGAUUUGUAAAGUg || | : ||||||| acgcaGGCCGGUGUCAUUUCAa 2 18 2081 2102 [mm9:7:129224155-129224176:+] 0.6330 141 7 -12.72 -0.1232 MIMAT0000237 mmu-miR-204 28018 Ubfd1 ucCGUAUCCU---ACUGUUUCCCUu | ||| |: | ::||||||| uaGGAUAAGGCCUUUGUAAAGGGAg 2 21 134 158 [mm9:7:129212700-129212724:+] 0.5883 147 7 -20.19 -0.1646 MIMAT0000239 mmu-miR-206 28018 Ubfd1 ggUGUGUGAAGGAAUGU-AAGGu |: :|:| | |||| |||| ccAUUUAUUGGCCUACAGUUCCa 2 21 1746 1768 [mm9:7:129214312-129214334:+] 0.5332 120 0 -19.29 -0.3537 MIMAT0000248 mmu-miR-30e 28018 Ubfd1 gaAGGUCAGUUCCUACAAAUGu |::| || |||||||| ccUUUACACACCCAUGUUUACu 2 21 869 890 [mm9:7:129213435-129213456:+] 0.5105 152 7 -9.48 -0.3708 MIMAT0000366 mmu-miR-290-5p 28018 Ubfd1 uuucACGGGGGUAU---CAAACUCa | |:|::| : ||||||| cuuaUACUCUUAAGUCUGUUUGAGa 2 19 291 315 [mm9:7:129222365-129222389:+] 0.7098 141 7 -13.81 -0.5070 MIMAT0000366 mmu-miR-290-5p 28018 Ubfd1 uuUCACGGGGGUA---UCAAACUca ||| : :| || ||||||| uuAGUCUAUCAAUUAAAGUUUGAua 3 21 3605 3629 [mm9:7:129225679-129225703:+] 0.7640 131 0 -9.23 -0.1884 MIMAT0000368 mmu-miR-291a-3p 28018 Ubfd1 cguguguuucaccUUCGUGAAa |||||||| -------------AAGCACUUu 2 10 1 9 [mm9:7:129222075-129222083:+] 0.8861 145 7 -11.68 -0.2174 MIMAT0000369 mmu-miR-292-5p 28018 Ubfd1 guuuucucgggGGUCAAACUCa :| ||||||| auacucuuaagUCUGUUUGAGa 2 12 294 315 [mm9:7:129222368-129222389:+] 0.7098 143 7 -12.78 -0.5035 MIMAT0000369 mmu-miR-292-5p 28018 Ubfd1 guuuucucgggggUCAAACUca ||||||| gucuaucaauuaaAGUUUGAua 3 10 3608 3629 [mm9:7:129225682-129225703:+] 0.7640 125 0 -6.66 -0.1884 MIMAT0000372 mmu-miR-294 28018 Ubfd1 uguguguuuucccUUCGUGAAa |||||||| -------------AAGCACUUu 2 10 1 9 [mm9:7:129222075-129222083:+] 0.8861 145 7 -9.74 -0.2174 MIMAT0000373 mmu-miR-295 28018 Ubfd1 ucugaguuuucaucaUCGUGAAa ||||||| --------------aAGCACUUu 2 9 1 9 [mm9:7:129222075-129222083:+] 0.8861 140 7 -9.84 -0.2174 MIMAT0000373 mmu-miR-295 28018 Ubfd1 ucUGAGUUUUCAUCAUCGU-GAAa | | : |:|||| |||| ||| caAGUGGCAGGUAG-AGCAUCUUc 2 22 1829 1851 [mm9:7:129223903-129223925:+] 0.5731 123 0 -12.87 -0.1528 MIMAT0004576 mmu-miR-296-3p 28018 Ubfd1 ccUCUC-GGAGGUGG--GUUGGGAg | || |||:|||: ||||||| caACAGCCCUUCACUAGCAACCCUa 2 21 1634 1658 [mm9:7:129214200-129214224:+] 0.5158 162 7 -23.97 -0.3025 MIMAT0000379 mmu-miR-301a 28018 Ubfd1 cgAAACUGUUAUGAUAAC-GUGAc ||||| :: || :||| |||| caUUUGA-GGGACAGUUGACACUa 2 22 806 828 [mm9:7:129213372-129213394:+] 0.5123 127 0 -11.38 -0.2074 MIMAT0000380 mmu-miR-302a 28018 Ubfd1 agugguuuuguaccUUCGUGAAu |||||||| --------------AAGCACUUu 2 10 1 9 [mm9:7:129222075-129222083:+] 0.8861 145 7 -11.41 -0.2174 MIMAT0000380 mmu-miR-302a 28018 Ubfd1 agUGGUU--UUGUACCU-UCGU-GAAu ||||| ::|| | | |||| ||| ugACCAAGUGGCAGGUAGAGCAUCUUc 2 22 1825 1851 [mm9:7:129223899-129223925:+] 0.5731 123 0 -15.63 -0.1678 MIMAT0000385 mmu-miR-106a 28018 Ubfd1 gaUGGACGUGACAAUCGU-GAAAc ||||| | | | ||| |||| cuACCUGAAAUAU--GCAUCUUUg 2 22 76 97 [mm9:7:129212642-129212663:+] 0.6659 122 0 -19.70 -0.3173 MIMAT0000385 mmu-miR-106a 28018 Ubfd1 gauggacgugacaaUCGUGAAAc |||||||| -------------aAGCACUUUc 2 10 1 10 [mm9:7:129222075-129222084:+] 0.8861 145 7 -9.24 -0.1712 MIMAT0000386 mmu-miR-106b 28018 Ubfd1 uagacgugacagUCGUGAAAu |||||||| -----------aAGCACUUUc 2 10 1 10 [mm9:7:129222075-129222084:+] 0.8861 145 7 -9.26 -0.1712 MIMAT0000514 mmu-miR-30c 28018 Ubfd1 cgacucucacauccUACAAAUGu |||||||| uccuuuacacacccAUGUUUACu 2 10 868 890 [mm9:7:129213434-129213456:+] 0.5105 145 7 -7.08 -0.3827 MIMAT0000515 mmu-miR-30d 28018 Ubfd1 gaaggucagccccUACAAAUGu |||||||| ccuuuacacacccAUGUUUACu 2 10 869 890 [mm9:7:129213435-129213456:+] 0.5105 145 7 -8.60 -0.3767 MIMAT0000516 mmu-miR-148a 28018 Ubfd1 uguuUCAAGACAUC--ACGUGACu || | | || ||||||| uaguAGAUAAGAAGCCUGCACUGa 2 19 712 735 [mm9:7:129213278-129213301:+] 0.4928 145 7 -14.76 -0.1160 MIMAT0000516 mmu-miR-148a 28018 Ubfd1 uguuucAAGACAUCAC-GUGACu ||: ||: || ||||| cuuugcUUUGGUGAUGCCACUGg 2 17 1525 1547 [mm9:7:129214091-129214113:+] 0.5561 120 0 -14.18 -0.3552 MIMAT0000519 mmu-miR-200a 28018 Ubfd1 ugUAGCAAUGGUCUGUCACAAu | | |||| |||||||| gcAACCCUACC--ACAGUGUUc 2 21 1650 1669 [mm9:7:129214216-129214235:+] 0.5158 153 7 -15.35 -0.2154 MIMAT0000526 mmu-miR-15a 28018 Ubfd1 guguuugguAAUACACGACGAu || | ||||||| guuugcuguUUCUCUGCUGCUg 2 14 1346 1367 [mm9:7:129223420-129223441:+] 0.7076 149 7 -13.73 -0.1496 MIMAT0000527 mmu-miR-16 28018 Ubfd1 gcgguuAUAAAUGCACGACGAu |:||| : ||||||| guuugcUGUUUCUCUGCUGCUg 2 17 1346 1367 [mm9:7:129223420-129223441:+] 0.7076 156 7 -14.52 -0.1467 MIMAT0000528 mmu-miR-18a 28018 Ubfd1 gauagacgugAUCUAC-GUGGAAu || ||| |||||| auaaauaaugUAAAUGACACCUUu 2 14 2176 2199 [mm9:7:129224250-129224273:+] 0.6286 121 6 -12.32 -0.3303 MIMAT0000529 mmu-miR-20a 28018 Ubfd1 gaUGGACGUGAUAUUCGU-GAAAu ||||| | ||| ||| |||| cuACCUGAA--AUAUGCAUCUUUg 2 22 76 97 [mm9:7:129212642-129212663:+] 0.6659 130 0 -18.69 -0.3355 MIMAT0000529 mmu-miR-20a 28018 Ubfd1 gauggacgugauaUUCGUGAAAu ||||||||| -------------AAGCACUUUc 2 11 1 10 [mm9:7:129222075-129222084:+] 0.8861 150 7 -9.50 -0.1712 MIMAT0000532 mmu-miR-23a 28018 Ubfd1 ccuuuagggaccgUUACACUa ||||||| uaccuaugaagaaAAUGUGAg 2 9 1340 1360 [mm9:7:129213906-129213926:+] 0.5264 140 7 -10.90 -0.4064 MIMAT0000535 mmu-miR-29a 28018 Ubfd1 auuggcUAAAGUCUACCACGAu :|| :| ||||||| guuuguGUUGUACUUGGUGCUa 2 17 1131 1152 [mm9:7:129213697-129213718:+] 0.4662 148 7 -14.49 -0.3194 MIMAT0000535 mmu-miR-29a 28018 Ubfd1 auuggcuaaAGUCUACCACGAu | | |||||||| uauuuuaagUAAAAUGGUGCUu 2 14 2130 2151 [mm9:7:129224204-129224225:+] 0.6460 149 7 -13.26 -0.7210 MIMAT0000536 mmu-miR-29c 28018 Ubfd1 auuggcUAAAGUUUACCACGAu :|| :| ||||||| guuuguGUUGUACUUGGUGCUa 2 17 1131 1152 [mm9:7:129213697-129213718:+] 0.4662 148 7 -14.41 -0.3194 MIMAT0000536 mmu-miR-29c 28018 Ubfd1 auuggcuaaAGUUUACCACGAu | |||||||||| uauuuuaagUAAAAUGGUGCUu 2 14 2130 2151 [mm9:7:129224204-129224225:+] 0.6460 157 7 -14.78 -0.7210 MIMAT0000540 mmu-miR-93 28018 Ubfd1 gauggacgugcuugUCGUGAAAc |||||||| -------------aAGCACUUUc 2 10 1 10 [mm9:7:129222075-129222084:+] 0.8861 145 7 -9.14 -0.1712 MIMAT0000541 mmu-miR-96 28018 Ubfd1 ucguuuUUACACGA-UCACGGUUu ::||| :| |||||||| uuuuguGGUGUAUUCAGUGCCAAg 2 18 1600 1623 [mm9:7:129223674-129223697:+] 0.6472 156 7 -18.00 -0.4395 MIMAT0000548 mmu-miR-322 28018 Ubfd1 agGUUUUGUACUUAACGACGAc :|: | | |:|||||||| agUAGCUCCUUAGUUGCUGCUu 2 21 2941 2962 [mm9:7:129225015-129225036:+] 0.6160 156 7 -13.41 -0.1005 MIMAT0000548 mmu-miR-322 28018 Ubfd1 agguuuuguacuuaACGACGAc ||||||| guuugcuguuucucUGCUGCUg 2 9 1346 1367 [mm9:7:129223420-129223441:+] 0.7076 140 7 -14.24 -0.1540 MIMAT0000565 mmu-miR-328 28018 Ubfd1 ugccuucccgucuCUCCCGGUc |||||||| ugcuuucccuuauGAGGGCCAa 2 10 2958 2979 [mm9:7:129225032-129225053:+] 0.6160 145 7 -15.26 -0.1271 MIMAT0000565 mmu-miR-328 28018 Ubfd1 ugccuucccgucucUCCCGGUc ||||||| cccccugcugcccaAGGGCCAa 2 9 2049 2070 [mm9:7:129224123-129224144:+] 0.6330 140 7 -13.04 -0.1009 MIMAT0000580 mmu-miR-148b 28018 Ubfd1 uguuucaagacacuACGUGACu ||||||| guagauaagaagccUGCACUGa 2 9 714 735 [mm9:7:129213280-129213301:+] 0.4928 140 7 -13.28 -0.1160 MIMAT0000580 mmu-miR-148b 28018 Ubfd1 uguuucAAGACACUAC-GUGACu ||: |||||| ||||| cuuugcUUUGGUGAUGCCACUGg 2 17 1525 1547 [mm9:7:129214091-129214113:+] 0.5561 132 0 -18.38 -0.3552 MIMAT0000584 mmu-miR-339-5p 28018 Ubfd1 gcacuCGAGGACCUCC-UGUCCCu |:|::| |||| |||||| ugcuuGUUUUUUGAGGCACAGGGu 2 19 486 509 [mm9:7:129213052-129213075:+] 0.4698 134 6 -23.47 -0.1317 MIMAT0004651 mmu-miR-340-5p 28018 Ubfd1 uuAGUCAGAGUA----AC-GAAAUAUu |||||| |:| | ||||||| acUCAGUCCCGUGAACAGUCUUUAUAu 2 21 2379 2405 [mm9:7:129224453-129224479:+] 0.6111 150 7 -14.33 -0.3496 MIMAT0000590 mmu-miR-342-3p 28018 Ubfd1 ugcccAC-GCUAAAGACACACUCu || | | |||||||||| uauacUGACUAAAUCUGUGUGAGc 2 19 2424 2447 [mm9:7:129224498-129224521:+] 0.6111 157 7 -17.90 -0.2659 MIMAT0000612 mmu-miR-135b 28018 Ubfd1 agUGUAUCC-UUACUU-UUCGGUAu |:: :|| ::|||: ||||||| aaAUGGGGGUGGUGAGUAAGCCAUa 2 22 574 598 [mm9:7:129222648-129222672:+] 0.6157 155 7 -23.99 -0.4675 MIMAT0000649 mmu-miR-17 28018 Ubfd1 gaUGGACGUGACAUUCGU-GAAAc ||||| | || ||| |||| cuACCUGAA--AUAUGCAUCUUUg 2 22 76 97 [mm9:7:129212642-129212663:+] 0.6659 122 0 -19.70 -0.3383 MIMAT0000649 mmu-miR-17 28018 Ubfd1 gauggacgugacaUUCGUGAAAc ||||||||| -------------AAGCACUUUc 2 11 1 10 [mm9:7:129222075-129222084:+] 0.8861 150 7 -9.38 -0.1712 MIMAT0000651 mmu-miR-19a 28018 Ubfd1 agUCA-AAACGUAUCUAAAC-GUGu ||| ||||| || |||| ||| gcAGUAUUUGC-UA-UUUUGUCACu 2 22 2359 2381 [mm9:7:129224433-129224455:+] 0.6111 124 0 -14.73 -0.1714 MIMAT0000653 mmu-miR-28 28018 Ubfd1 gaguuaucugacACUCGAGGAa | ||||||| ----------aaUAAGCUCCUu 2 11 1 12 [mm9:7:129212567-129212578:+] 0.6698 142 7 -13.49 -0.2169 MIMAT0000653 mmu-miR-28 28018 Ubfd1 gagUUAUCU-GACACUCGA-GGAa |:|:|| :|| |||| ||| cagAGUGGAGUUGACAGCUACCUg 2 20 59 82 [mm9:7:129212625-129212648:+] 0.6679 122 0 -14.88 -0.5213 MIMAT0000653 mmu-miR-28 28018 Ubfd1 gaGUUAUCUGACAC-UCGAGGAa :|| : || | ||||||| ggUAAGGUCCUCAGUAGCUCCUu 2 21 2929 2951 [mm9:7:129225003-129225025:+] 0.6160 143 7 -17.12 -0.1137 MIMAT0000657 mmu-miR-200c 28018 Ubfd1 agguaguaaugggccGUCAUAAu ||||||| gccagagaauaugacCAGUAUUg 2 9 208 230 [mm9:7:129212774-129212796:+] 0.5587 140 7 -13.98 -0.1940 MIMAT0000665 mmu-miR-223 28018 Ubfd1 accccauaaacugUUUGACUGu |||||||| agagguuccccuaAAACUGACc 2 10 340 361 [mm9:7:129212906-129212927:+] 0.5290 145 7 -13.85 -0.3095 MIMAT0000665 mmu-miR-223 28018 Ubfd1 accCCAUAAACUGUUUGAC-UGu ||||| ||||||| || caaGGUAUGACUCAAACUGUACu 2 20 1489 1511 [mm9:7:129214055-129214077:+] 0.5757 127 0 -17.07 -0.1675 MIMAT0000666 mmu-miR-320 28018 Ubfd1 agcgggAGAGUUGGGUCGAAAa |:|||| ||||||| cuuugaUUUCAAAACAGCUUUc 2 17 1097 1118 [mm9:7:129213663-129213684:+] 0.4885 160 7 -17.13 -0.2330 MIMAT0000666 mmu-miR-320 28018 Ubfd1 agCGGGAGAGUU-GGGUCGAAAa | ||| ||: :|||||||| uuGGCCU-ACAGUUCCAGCUUUa 2 21 1753 1774 [mm9:7:129214319-129214340:+] 0.5332 153 7 -21.34 -0.3010 MIMAT0000668 mmu-miR-211 28018 Ubfd1 uccguUUCC--UACUGUUUCCCUu |||| | ::||||||| aggauAAGGCCUUUGUAAAGGGAg 2 18 135 158 [mm9:7:129212701-129212724:+] 0.5883 148 7 -20.37 -0.1630 MIMAT0000670 mmu-miR-222 28018 Ubfd1 ugggUCAUCGGUCUACAU-CGa | ||| :||||||| || agggAAUAGAUAGAUGUAUGCc 2 18 3126 3147 [mm9:7:129225200-129225221:+] 0.6257 129 0 -14.14 -0.2554 MIMAT0000671 mmu-miR-224 28018 Ubfd1 uugccuuGGUGAUC-ACUGAAu |:||| | |||||| uuguuucCUACUUGUUGACUUa 2 15 2097 2118 [mm9:7:129214663-129214684:+] 0.5005 122 6 -13.59 -0.5510 MIMAT0000671 mmu-miR-224 28018 Ubfd1 uugccuuGGUGAUCACUGAAu |:| |||||||| auuuuucCUAGAAGUGACUUc 2 15 445 465 [mm9:7:129222519-129222539:+] 0.6157 150 7 -12.08 -0.5324 MIMAT0000673 mmu-miR-181b 28018 Ubfd1 ugGGUGGCUGU-CGUUAC-UUACAa ||:|| || | :|| ||||| acCCGCCCUCAUCCUGUGAAAUGUa 2 22 1460 1484 [mm9:7:129223534-129223558:+] 0.6472 120 0 -19.20 -0.3093 MIMAT0000741 mmu-miR-377 28018 Ubfd1 uguuuucaacggAAACACACUa | ||||||| auacugacuaaaUCUGUGUGAg 2 11 2425 2446 [mm9:7:129224499-129224520:+] 0.6111 142 7 -8.47 -0.1224 MIMAT0000766 mmu-miR-335-5p 28018 Ubfd1 ugUAAAAAG-CAAUAACGAGAACu || | | | ||||||||||| gaAUAAUACAGCUAUUGCUCUUGu 2 22 2077 2100 [mm9:7:129214643-129214666:+] 0.5005 164 7 -16.53 -0.6860 MIMAT0000766 mmu-miR-335-5p 28018 Ubfd1 ugUA-AAAAGCA-AUA-ACGAG-AACu || ||||:|| |:| ||||| ||| auAUAUUUUUGUGUGUGUGCUCAUUGa 2 22 596 622 [mm9:7:129222670-129222696:+] 0.6157 134 0 -18.98 -0.3794 MIMAT0000766 mmu-miR-335-5p 28018 Ubfd1 uguaaAAAGCAAUAACG-AGAACu |||| | |||| ||||| ccaacUUUC--UCUUGCUUCUUGc 2 19 3172 3193 [mm9:7:129225246-129225267:+] 0.6257 123 0 -10.61 -0.1892 MIMAT0000769 mmu-miR-133b 28018 Ubfd1 aucgaccAACUUCCCCUGGUUu || ||| ||||||| gugucauUUCAAGAGGACCAAa 2 16 2091 2112 [mm9:7:129224165-129224186:+] 0.6330 159 7 -14.54 -0.2863 MIMAT0004745 mmu-miR-384-5p 28018 Ubfd1 uguaacggauccuuaACAAAUGu ||||||| uccuuuacacacccaUGUUUACu 2 9 868 890 [mm9:7:129213434-129213456:+] 0.5105 140 7 -7.47 -0.3767 MIMAT0001095 mmu-miR-370 28018 Ubfd1 ugguccaagguggGGUCGUCCg :||||||| uacuaauggugggUCAGCAGGc 2 10 1419 1440 [mm9:7:129213985-129214006:+] 0.5757 141 7 -21.24 -0.1263 MIMAT0001533 mmu-miR-448 28018 Ubfd1 uaccCUGU--A-GGA-UGUAUACGUu |||| | ||| | ||||||| aguuGACAGCUACCUGAAAUAUGCAu 2 19 67 92 [mm9:7:129212633-129212658:+] 0.6679 151 7 -16.42 -0.5422 MIMAT0001533 mmu-miR-448 28018 Ubfd1 uaccCUGUAGGAUG-UA-UACGUu ||| |:| |: || ||||| uaauGACUUUCCAUAAUAAUGCAa 2 19 2002 2025 [mm9:7:129214568-129214591:+] 0.5287 121 0 -12.54 -0.9586 MIMAT0001537 mmu-miR-429 28018 Ubfd1 ugccgUAAUGGUCUGUCAUAAu | ||: | ||||||| cagagAAUAUGA-CCAGUAUUg 2 18 210 230 [mm9:7:129212776-129212796:+] 0.5587 143 7 -10.53 -0.1940 MIMAT0003112 mmu-miR-489 28018 Ubfd1 cgaCGGUAUAU------ACAC-CAC-AGUAa |||||||| |||| ||| |||| uaaGCCAUAUAUUUUUGUGUGUGUGCUCAUu 2 21 590 620 [mm9:7:129222664-129222694:+] 0.6157 126 0 -22.30 -0.1856 MIMAT0003128 mmu-miR-485 28018 Ubfd1 cuuaaGUAGUGCCGGUCGGAGa || ||: | ||||||| cagccCA-CAUAGACAGCCUCu 2 18 1575 1595 [mm9:7:129223649-129223669:+] 0.6472 151 7 -17.58 -0.2185 MIMAT0003182 mmu-miR-494 28018 Ubfd1 cuccaaagggcacAUACAAAGu |||||||| aauauguaaguacUAUGUUUCc 2 10 3430 3451 [mm9:7:129225504-129225525:+] 0.7640 145 7 -6.83 -0.4586 MIMAT0003182 mmu-miR-494 28018 Ubfd1 cuccaaAGGGCAC-AUACA-AAGu |||:||| |||| ||| cccucaUCCUGUGAAAUGUAUUCg 2 17 1465 1488 [mm9:7:129223539-129223562:+] 0.6472 123 0 -16.83 -0.2879 MIMAT0003182 mmu-miR-494 28018 Ubfd1 cuccAAAGGGCACAUAC-AAAGu |||||| |||| |||| auuaUUUCCC---UAUGAUUUCg 2 19 649 668 [mm9:7:129222723-129222742:+] 0.6058 122 0 -13.80 -0.6868 MIMAT0003187 mmu-miR-20b 28018 Ubfd1 gaUGGACGUGAUACUCGU-GAAAc ||||| | ||| ||| |||| cuACCUGAAAUAU--GCAUCUUUg 2 22 76 97 [mm9:7:129212642-129212663:+] 0.6659 130 0 -21.25 -0.3146 MIMAT0003187 mmu-miR-20b 28018 Ubfd1 gauggacgugauacUCGUGAAAc |||||||| -------------aAGCACUUUc 2 10 1 10 [mm9:7:129222075-129222084:+] 0.8861 145 7 -8.94 -0.1712 MIMAT0003188 mmu-miR-503 28018 Ubfd1 gacgucAUGA-C-AAGGGCGACGAu ||:| | ||: ||||||| uuagucUAUUAGAUUUGCGCUGCUg 2 18 3520 3544 [mm9:7:129225594-129225618:+] 0.7640 151 7 -18.01 -0.5713 MIMAT0003374 mmu-miR-302b 28018 Ubfd1 gaugauuuuguaccUUCGUGAAu |||||||| --------------AAGCACUUu 2 10 1 9 [mm9:7:129222075-129222083:+] 0.8861 145 7 -9.01 -0.2174 MIMAT0003377 mmu-miR-302d 28018 Ubfd1 ugugaguuuguaccUUCGUGAAu |||||||| --------------AAGCACUUu 2 10 1 9 [mm9:7:129222075-129222083:+] 0.8861 145 7 -9.01 -0.2174 MIMAT0004186 mmu-miR-301b 28018 Ubfd1 cgAAACUGUUAUGGUAAC-GUGAc ||||| :: || :||| |||| caUUUGA-GGGACAGUUGACACUa 2 22 806 828 [mm9:7:129213372-129213394:+] 0.5123 127 0 -11.38 -0.2074 MIMAT0003889 mmu-miR-758 28018 Ubfd1 aucaccuggUCCAGUGUUu | ||||||| uagcaaaggAAGUCACAAg 2 11 171 189 [mm9:7:129212737-129212755:+] 0.5883 142 7 -14.01 -0.2568 MIMAT0003738 mmu-miR-496 28018 Ubfd1 cuCUAACC-GGUACA----UUAUGAGu | |||| ||||| ||||||| aaGUUUGGAACAUGUGUGGAAUACUCu 2 21 266 292 [mm9:7:129222340-129222366:+] 0.7687 154 7 -18.49 -0.4071 MIMAT0003738 mmu-miR-496 28018 Ubfd1 cucuaAC-CGGUACAUUAUGAGu || || || ||||||| cugugUGAGCAUUGGAAUACUCu 2 18 2438 2460 [mm9:7:129224512-129224534:+] 0.6111 152 7 -13.99 -0.1113 MIMAT0003450 mmu-miR-488 28018 Ubfd1 cugGUUCUUUGUCGGAAAGUu :|| :||| ||||||| augUAAAUGACA-CCUUUCAu 2 19 2183 2202 [mm9:7:129224257-129224276:+] 0.6286 152 7 -13.64 -0.3554 MIMAT0003450 mmu-miR-488 28018 Ubfd1 cuGGUUCUUUGUCGGAAA-GUu ||| || : :|||||| || auCCAUGAUG-GGCCUUUGCAg 2 20 2826 2846 [mm9:7:129224900-129224920:+] 0.6160 121 0 -15.44 -0.1091 MIMAT0003453 mmu-miR-497 28018 Ubfd1 auguuuggugucACACGACGAc | ||||||| guuugcuguuucUCUGCUGCUg 2 11 1346 1367 [mm9:7:129223420-129223441:+] 0.7076 142 7 -14.64 -0.1540 MIMAT0003456 mmu-miR-495 28018 Ubfd1 uucuucACGUGGUACAAACAAa ||: :| |||||||| acacucUGU-UCUUGUUUGUUu 2 17 3461 3481 [mm9:7:129225535-129225555:+] 0.7640 150 7 -10.98 -0.9368 MIMAT0003482 mmu-miR-499 28018 Ubfd1 uuugUAGUGACG--UUCAGAAUu ||:: || :||||||| gaggAUUGAAGCUAGAGUCUUAc 2 18 683 705 [mm9:7:129213249-129213271:+] 0.4966 144 7 -9.56 -0.1093 MIMAT0004828 mmu-miR-708 28018 Ubfd1 gggucgaucuaacAUUCGAGGAa ||||||||| -----------aaUAAGCUCCUu 2 11 1 12 [mm9:7:129212567-129212578:+] 0.6698 150 7 -14.72 -0.2169 MIMAT0004828 mmu-miR-708 28018 Ubfd1 ggGUC-GAUCU-AACAUUCGA-GGAa ||| |:|| ||| |||| ||| agCAGAGUGGAGUUGACAGCUACCUg 2 22 57 82 [mm9:7:129212623-129212648:+] 0.6679 123 0 -17.21 -0.5249 MIMAT0004828 mmu-miR-708 28018 Ubfd1 ggGUCGAUCUAACA-U--UCGAGGAa ::|: ||:| | | ||||||| ccUGGUAAGGUCCUCAGUAGCUCCUu 2 22 2926 2951 [mm9:7:129225000-129225025:+] 0.6160 143 7 -21.53 -0.1137 MIMAT0003513 mmu-miR-505 28018 Ubfd1 ucuuuuGGUCGUU-CACAACUGc || |:|| ||||||| aaauuuCCUGUAAUUUGUUGACg 2 17 1288 1310 [mm9:7:129213854-129213876:+] 0.5247 151 7 -18.41 -0.5685 MIMAT0003513 mmu-miR-505 28018 Ubfd1 ucuuuuggucguucACAACUGc ||||||| ucuuguuuccuacuUGUUGACu 2 9 2095 2116 [mm9:7:129214661-129214682:+] 0.5005 140 7 -9.73 -0.4235 MIMAT0003513 mmu-miR-505 28018 Ubfd1 ucUUUUGGUCGUUCACAAC-UGc |:|| | || |||||| || caAGAAACUGCCUGUGUUGCACc 2 21 1692 1714 [mm9:7:129223766-129223788:+] 0.6302 128 0 -15.82 -0.1707 MIMAT0003780 mmu-miR-490 28018 Ubfd1 gucguacCUCAGGA-----GGUCCAAc | ||||| ||||||| aguucaaGUGUCCUUUAUCCCAGGUUc 2 16 1111 1137 [mm9:7:129223185-129223211:+] 0.6617 142 7 -17.71 -0.1503 MIMAT0004324 mmu-miR-181d 28018 Ubfd1 ugGGUGGCUGU-UGUUAC-UUACAa ||:|| || | :|| ||||| acCCGCCCUCAUCCUGUGAAAUGUa 2 22 1460 1484 [mm9:7:129223534-129223558:+] 0.6472 120 0 -19.87 -0.3093 MIMAT0004847 mmu-miR-882 28018 Ubfd1 ugauuACGCGAUUGAGAGAGGa ||: :|| ||||||| guuuuUGUAUUA--UCUCUCCu 2 18 453 472 [mm9:7:129213019-129213038:+] 0.5007 146 7 -16.00 -0.3865 MIMAT0004858 mmu-miR-18b 28018 Ubfd1 gaUUGUCGUGAUCUAC-GUGGAAu ||:| :: || ||| |||||| uaAAUAAUG-UAAAUGACACCUUu 2 22 2177 2199 [mm9:7:129224251-129224273:+] 0.6286 127 6 -12.37 -0.3303 MIMAT0004869 mmu-miR-421 28018 Ubfd1 cgcggguuAAUUACAGAC-AACUa |||| ||||| |||| uuauacucUUAA-GUCUGUUUGAg 2 16 292 314 [mm9:7:129222366-129222388:+] 0.7098 125 0 -13.51 -0.1321 MIMAT0004869 mmu-miR-421 28018 Ubfd1 cgcgGGUUAAUUACAGACA-ACUa |::| ||| ||||| ||| uauaCUGACUAA-AUCUGUGUGAg 2 20 2424 2446 [mm9:7:129224498-129224520:+] 0.6111 121 0 -7.71 -0.2135 MIMAT0004896 mmu-miR-590-3p 28018 Ubfd1 ugaUCGAAUAUGUAUUUUAAu |||||| | |||||||| uuaAGCUUA-A-AUAAAAUUg 2 19 2221 2239 [mm9:7:129214787-129214805:+] 0.4998 162 7 -12.71 -0.3818 MIMAT0004896 mmu-miR-590-3p 28018 Ubfd1 ugaUCGAAUAUGU-AUUUUAAu | :||: :|| ||||||| acaAAUUUG-GCAGUAAAAUUg 2 19 916 936 [mm9:7:129213482-129213502:+] 0.5088 147 7 -8.17 -0.2012 MIMAT0004896 mmu-miR-590-3p 28018 Ubfd1 ugaucGAAUAUGU-AUUUUAAu ||| ::| ||||||| uuuuuCUUUGGUAUUAAAAUUg 2 17 546 567 [mm9:7:129222620-129222641:+] 0.6157 147 7 -6.05 -0.4668 MIMAT0004937 mmu-miR-875-5p 28018 Ubfd1 guggacuauuuUGACUCCAUAu :| ||||||| uacagacuucuGCAGAGGUAUc 2 12 3404 3425 [mm9:7:129225478-129225499:+] 0.7110 143 7 -12.83 -0.1967 MIMAT0004943 mmu-miR-653 28018 Ubfd1 gucaucucuaacaAAGUUGUg ||||||| uuuacucuguaucUUCAACAg 2 9 764 784 [mm9:7:129213330-129213350:+] 0.5123 140 7 -6.47 -0.1333 MIMAT0005850 mmu-miR-1192 28018 Ubfd1 uuaaaccAGACA--AACAAACAAa ||||| ||||||||| uguacacUCUGUUCUUGUUUGUUu 2 16 3458 3481 [mm9:7:129225532-129225555:+] 0.7640 162 7 -14.80 -0.9303 MIMAT0005850 mmu-miR-1192 28018 Ubfd1 uuaaaccaGACAAACA-AACAAa ||| |||| ||||| uugacuagCUG-UUGUAUUGUUu 2 15 3572 3593 [mm9:7:129225646-129225667:+] 0.7640 120 0 -11.06 -0.5820

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G045285 Ubfd1 Mus musculus 28018 19536157 0 0 R53474; MOUSE$UBFD1_01; Binding factors: mmu-miR-27a-3p , mmu-miR-27b-3p // 0 0 R53475; MOUSE$UBFD1_02; Binding factors: mmu-miR-21a-5p , mmu-miR-590-5p // 0 0 R53487; MOUSE$UBFD1_03; Binding factors: mmu-miR-28a-5p , mmu-miR-708-5p // 0 0 R53488; MOUSE$UBFD1_04; Binding factors: mmu-miR-106a-5p , mmu-miR-106b-5p , mmu-miR-17-5p , mmu-miR-20a-5p , mmu-miR-20b-5p , mmu-miR-290a-3p , mmu-miR-291a-3p , mmu-miR-291b-3p , mmu-miR-292a-3p , mmu-miR-294-3p , mmu-miR-295-3p , mmu-miR-93-5p // 0 0 R53489; MOUSE$UBFD1_05; Binding factors: mmu-miR-1897-5p , mmu-miR-9-5p // 0 0 R53501; MOUSE$UBFD1_06; Binding factors: mmu-miR-106a-5p , mmu-miR-106b-5p , mmu-miR-17-5p , mmu-miR-20a-5p , mmu-miR-20b-5p , mmu-miR-290a-3p , mmu-miR-291a-3p , mmu-miR-291b-3p , mmu-miR-292a-3p , mmu-miR-294-3p , mmu-miR-295-3p , mmu-miR-93-5p

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Ubfd1 mmu-miR-692 beg:2967 end:2986 pic:3' CTCACTCCGCGAGTTTCTCTA 5'& ||||| || ||||||||| &5' ---TGAGG-GC-CAAAGAGAT 3' Ubfd1 mmu-miR-501-5p beg:3208 end:3226 pic:3' AAAGTGGGTCCCTGTTTCCTAA 5'& ||| ||| ||||||| &5' -----CCCTTGGA-AAAGGAT- 3' Ubfd1 mmu-miR-343 beg:3109 end:3128 pic:3' AGACC-CGTGTACTTCCCTCT 5'& || || || ||||||||. &5' ---GGAGC-CAAGAAGGGAGG 3' Ubfd1 mmu-miR-496 beg:2441 end:2460 pic:3' CTC-TAACCGGTACATTATGAGT 5'& ||| ||||| ||||||| &5' GAGCATTGG------AATACTC- 3' Ubfd1 mmu-miR-30estar beg:1285 end:1312 pic:3' CGACATTTGTA---GGCTGACTTTC 5'& ||||||.| ..||||||||| &5' -CTGTAAGCCTTGATTGACTGAAAG 3' Ubfd1 mmu-miR-30estar beg:455 end:474 pic:3' CGACATTTGTAGGCTGACTTTC 5'& || .|| |.| ||||||| &5' ---GT-GAC-TTCAACTGAAA- 3' Ubfd1 mmu-miR-877star beg:2098 end:2109 pic:3' ACCCTCCTCCCTCTTCTCCTGT 5'& |||||||| &5' -------------AAGAGGAC- 3' Ubfd1 mmu-miR-680 beg:672 end:688 pic:3' GGGGGTACAGTCGTCTACGGG 5'& .|||| ||||||| &5' -TCCCAA------AGATGCC- 3' Ubfd1 mmu-miR-28 beg:2935 end:2952 pic:3' GAGTTATCTGACACTCGAGGAA 5'& ||||.| |||||||| &5' CTCAGT--------AGCTCCTT 3' Ubfd1 mmu-miR-708 beg:2935 end:2952 pic:3' GGGTCGATCTAACATTCGAGGAA 5'& |.|||. |||||||| &5' CTCAGT---------AGCTCCTT 3' Ubfd1 mmu-miR-328 beg:2968 end:2979 pic:3' TGCCTTCCCGTCTCTCCCGGTC 5'& |||||||| &5' -------------GAGGGCCA- 3' Ubfd1 mmu-miR-767 beg:2131 end:2150 pic:3' ACGAGTCTGTTGGTACCACGT 5'& .|.| .|| ||||||| &5' --TTTAAGTAAA-ATGGTGC- 3' Ubfd1 mmu-miR-7astar beg:1860 end:1876 pic:3' ATACCGTCTGACACTAAACAAC 5'& ||||| ||||||| &5' --------ACTGTCATTTGTT- 3' Ubfd1 mmu-miR-3470a beg:22 end:42 pic:3' GGTCGGACCAGATGTTTCACT 5'& || ||| |||||||| &5' --AGACTGACC--CAAAGTGA 3' Ubfd1 mmu-miR-466d-5p beg:90 end:111 pic:3' GTACATGT-ACATGCGTGTGTGT 5'& || ||| | |||||||| &5' -----ACTTTGTTCACACACACA 3' Ubfd1 mmu-miR-128 beg:797 end:811 pic:3' TTTCTCTGGCCAAGTGACACT 5'& ||| ||||||||. &5' ------ACC---TCACTGTGG 3' Ubfd1 mmu-miR-485 beg:1577 end:1596 pic:3' CTTAAGTAGTGCCGGTCGGAGA 5'& || || | |||||||| &5' -----CA-CATAGACAGCCTCT 3' Ubfd1 mmu-miR-485 beg:1779 end:1795 pic:3' CTTAAGTAGTGCCGGTCGGAGA 5'& | || |||||||| &5' ----TTGTC----CCAGCCTC- 3' Ubfd1 mmu-miR-429 beg:2349 end:2367 pic:3' TGCCGTAATGGTCTGTCATAAT 5'& ||. ||| ||||||| &5' --GGTCA---CAG-CAGTATT- 3' Ubfd1 mmu-miR-200b beg:2350 end:2367 pic:3' AGTAGTAATGGTCCGTCATAAT 5'& .||| || |||||||| &5' --GTCA----CA-GCAGTATT- 3' Ubfd1 mmu-miR-203 beg:2083 end:2102 pic:3' GATCACCAGGATTT-GTAAAGTG 5'& || || ||||||| &5' -----GG-CCGGTGTCATTTCA- 3' Ubfd1 mmu-miR-761 beg:2045 end:2060 pic:3' ACACAGTCAAAGTGGGACGACG 5'& || ||||||||| &5' ----------TCCCCCTGCTGC 3' Ubfd1 mmu-miR-488 beg:2183 end:2202 pic:3' CTGGTTCTTTGTCGGAAAGTT 5'& .|| .||| ||||||| &5' ---TAAATGACA-CCTTTCA- 3' Ubfd1 mcmv-miR-M23-1-3p beg:2530 end:2546 pic:3' CCGGAGCCCGGCTGCGTCCTC 5'& |||| ||||||||| &5' ------GGGC--ACGCAGGAG 3' Ubfd1 mmu-miR-503 beg:3530 end:3545 pic:3' GACGTCATGACAAGGGCGACGAT 5'& ||. |||||||. &5' -----------TTTGCGCTGCTG 3' Ubfd1 mmu-miR-1952 beg:3116 end:3136 pic:3' GTCTT-CCTCCCACCTCT 5'& |||| |||||| ||| &5' -AGAAGGGAGGGAATAGA 3' Ubfd1 mmu-miR-1952 beg:3298 end:3317 pic:3' GTCTTCCTCCCACCTCT 5'& .||||| || |||| &5' TAGAAGTAGACAGGAG- 3' Ubfd1 mmu-miR-1941-3p beg:1489 end:1507 pic:3' TACCCTCTATGAC-GATTCTAC 5'& .||.|| |||||||| &5' -------GTATTGCCTAAGATG 3' Ubfd1 mmu-miR-432 beg:951 end:971 pic:3' GACGGGTGACTA---GATGAGGTTCT 5'& ||| ||.|||||||. &5' ---------GATTTGCTGCTCCAAGG 3' Ubfd1 mmu-miR-24 beg:2747 end:2763 pic:3' GACAAGGACGACTTGACTCGGT 5'& |||||| ||||||| &5' ------CTGCTG--CTGAGCC- 3' Ubfd1 mmu-miR-1906 beg:1347 end:1369 pic:3' TCGGGACGGAGTCCGACGACGT 5'& ||. | .||| |||||||. &5' -GCTGTTTCTCT-GCTGCTGT- 3' Ubfd1 mmu-miR-496 beg:264 end:292 pic:3' CTCTAACCG-GTACAT----TATGAGT 5'& || |||| |||||. |||||| &5' -AGTTTGGAACATGTGTGGAATACTC- 3' Ubfd1 mcmv-miR-m88-1 beg:3397 end:3416 pic:3' TCTGGGGCTGTAGCTGAAGAC 5'& ..|| ||| |||||||| &5' ---TTCCTACA--GACTTCTG 3' Ubfd1 mmu-miR-340-3p beg:330 end:344 pic:3' CGATATTTCATTGACTCTGCCT 5'& .|||||||||| &5' -----------GCTGAGACGGA 3' Ubfd1 mmu-miR-484 beg:2752 end:2766 pic:3' TAGCCCTCCCCTGACTCGGACT 5'& .|||||||||. &5' -----------GCTGAGCCTGG 3' Ubfd1 mmu-miR-106a beg:0 end:10 pic:3' GATGGACGTGACAATCGTGAAAC 5'& |||||||| &5' --------------AGCACTTT- 3' Ubfd1 mmu-miR-17 beg:0 end:10 pic:3' GATGGACGTGACATTCGTGAAAC 5'& ||||||||| &5' -------------AAGCACTTT- 3' Ubfd1 mmu-miR-20a beg:0 end:10 pic:3' GATGGACGTGATATTCGTGAAAT 5'& ||||||||| &5' -------------AAGCACTTT- 3' Ubfd1 mmu-miR-93 beg:0 end:10 pic:3' GATGGACGTGCTTGTCGTGAAAC 5'& |||||||| &5' --------------AGCACTTT- 3' Ubfd1 mmu-miR-133a beg:2098 end:2113 pic:3' GTCGACCAACTTCCCCTGGTTT 5'& ||| |||||||| &5' ----------AAGAGGACCAAA 3' Ubfd1 mmu-miR-133b beg:2098 end:2113 pic:3' ATCGACCAACTTCCCCTGGTTT 5'& ||| |||||||| &5' ----------AAGAGGACCAAA 3' Ubfd1 mmu-miR-1934 beg:1215 end:1232 pic:3' TCTCCTGCTTCGTCC--CCTGGTCT 5'& || ||||||| &5' ----------GCTTTCAGGACCAG- 3' Ubfd1 mmu-miR-207 beg:2530 end:2549 pic:3' CTCCCTCCTCTCG---GTCCTCTTCG 5'& |||.|| ||||||||| &5' -------GAGGGCACGCAGGAGAAG- 3' Ubfd1 mmu-miR-200astar beg:3592 end:3606 pic:3' AGGTCGTGACAGGCCATTCTAC 5'& ||| ||||||| &5' ----------TCCTGTAAGAT- 3' Ubfd1 mmu-miR-378star beg:3257 end:3274 pic:3' TGTGTCCTGGACCTCAGTCCTC 5'& ||.| |||||||| &5' -------ACTTCCAGTCAGGA- 3' Ubfd1 mmu-miR-1224 beg:2923 end:2942 pic:3' GAGGTGGAGGGG-TCAGGAGTG 5'& .||| .||||||| &5' ----GCCTGGTAAGGTCCTCA- 3' Ubfd1 mmu-miR-224 beg:449 end:465 pic:3' TTGCCTTGGTGATCACTGAAT 5'& |.| |||||||| &5' -------CTAGAAGTGACTT- 3' Ubfd1 mmu-miR-96 beg:1604 end:1624 pic:3' TCGTTTTTACACGA---TCACGGTTT 5'& |||. ||||||||. &5' ---------GTGTATTCAGTGCCAAG 3' Ubfd1 mmu-miR-489 beg:2080 end:2099 pic:3' CGA-CGGTATATACACCACAGTAA 5'& || ||| ||||||||| &5' GCAGGCC--------GGTGTCATT 3' Ubfd1 mmu-miR-425 beg:2083 end:2099 pic:3' AGTTGCCCTCACTAG-CACAGTAA 5'& | | |||||||| &5' -----------GGCCGGTGTCATT 3' Ubfd1 mmu-miR-1197 beg:1108 end:1125 pic:3' TCTTCATCTGGTACACAGGAT 5'& || || ||||||| &5' ------AGTTCAAGTGTCCT- 3' Ubfd1 mmu-miR-342-3p beg:2434 end:2447 pic:3' TGCCCACGCTAAAGACACACTCT 5'& |||||||||| &5' ------------TCTGTGTGAG- 3' Ubfd1 mmu-miR-2138 beg:195 end:209 pic:3' TAAGGCGGTTCGGGCAAGGGAA 5'& || |||||||| &5' -----------CCGGTTCCCTT 3' Ubfd1 mmu-miR-2138 beg:3197 end:3216 pic:3' TAAGGCGGTTCGGGCAAGGGAA 5'& .||.|||.|||||||| &5' ------TCAGGCCTGTTCCCTT 3' Ubfd1 mmu-miR-873 beg:1744 end:1762 pic:3' TCCTCTGAGTGTTCAAGGACG 5'& |.| .| |||||||| &5' ----GGCCTGC-AGTTCCTG- 3' Ubfd1 mmu-miR-706 beg:679 end:697 pic:3' AAAAAACTCTGTCCCAAAGAGA 5'& || .| |||||||| &5' ------GATGCCA-GTTTCTCT 3' Ubfd1 mmu-miR-292-5p beg:300 end:315 pic:3' GTTTTCTCGGGGGTCAAACTCA 5'& ||.|. ||||||| &5' ------AGTCT---GTTTGAG- 3' Ubfd1 mmu-miR-290-5p beg:301 end:315 pic:3' TTTCACGGGGGTATCAAACTCA 5'& |.|. ||||||| &5' -----GTCT-----GTTTGAG- 3' Ubfd1 mmu-miR-293star beg:301 end:315 pic:3' GTTTTACAGTGTGTCAAACTCA 5'& ||| ||||||| &5' ------GTCT----GTTTGAG- 3' Ubfd1 mmu-miR-1192 beg:3462 end:3482 pic:3' TTAAACCAGACA--AACAAACAAA 5'& ||||| |||||||||| &5' -------TCTGTTCTTGTTTGTTT 3' Ubfd1 mcmv-miR-m01-1 beg:1362 end:1386 pic:3' GGCAAGCTGCAATAAGAGGAGA 5'& |.| || .| |||||||||| &5' CTG-TCTTTGCAATTCTCCTCT 3' Ubfd1 mcmv-miR-m01-1 beg:2478 end:2496 pic:3' GGCAAGC-TGCAATAAGAGGAGA 5'& | |.||| ||.||||| &5' ------GTATGTT-TTTTCCTC- 3' Ubfd1 mcmv-miR-m01-1 beg:3032 end:3053 pic:3' GGCAAGCTG-CAAT-AAGAGGAGA 5'& || | ||.|||||| &5' ------GAAGGGAATTTTTCCTCT 3' Ubfd1 mcmv-miR-m01-3 beg:1112 end:1130 pic:3' AGCTCCGTTGTCAGCGAAGTGGC 5'& ||| ||| |||.|.| &5' ------CAAGTGTC-CTTTATC- 3' Ubfd1 mcmv-miR-m01-3 beg:1994 end:2018 pic:3' AGCTCCGTTGTCA-GCGAAGTGGC 5'& .||. |||| | |||||||| &5' ---GGGTCCCAGTGCTCTTCACCG 3' Ubfd1 mcmv-miR-m108-1 beg:2993 end:3016 pic:3' GCTGTGCTCGGT--GGCAGTCTTT 5'& |||. |||| .| ||||||| &5' --ACATT-GCCAGGTC-TCAGAAA 3' Ubfd1 mcmv-miR-m108-2-5p.1 beg:128 end:147 pic:3' GCCACGAGCGCAGCTCACTGGCG 5'& |||| .|.| |||||.| &5' -GGTGA-TGTG----GTGACTG- 3' Ubfd1 mcmv-miR-m21-1 beg:651 end:662 pic:3' GCCGAACTTGCACAGGGGATA 5'& |.|||||| &5' -------------TTCCCTAT 3' Ubfd1 mcmv-miR-M44-1 beg:2971 end:2987 pic:3' TGGCGCCGAGACCTTTTTCTAT 5'& ||| | |||.||||. &5' -----GGC-C---AAAGAGATG 3' Ubfd1 mcmv-miR-M44-1 beg:3203 end:3227 pic:3' TGGCGC-CGAG---ACCTTTTTCTAT 5'& || |.|| |||||||.|||. &5' ---GCCTGTTCCCTTGGAAAAGGATG 3' Ubfd1 mcmv-miR-m59-1 beg:1261 end:1282 pic:3' GAC-TGCCAGCTCCGTGACGATT 5'& || || .|| ||||||. &5' -TGTACATGTGA---ACTGCTG- 3' Ubfd1 mcmv-miR-m59-1 beg:2736 end:2755 pic:3' GACTGCCAGCTCCGTGACGATT 5'& || .| || ||||||. &5' -TG-TGATCACATAACTGCTG- 3' Ubfd1 mcmv-miR-m59-1 beg:869 end:890 pic:3' GACTGCCAGCTCCGTGACGATT 5'& |||| || || |||||||. &5' CTGA-GG-CGTTCCACTGCTG- 3' Ubfd1 mcmv-miR-M87-1 beg:2622 end:2642 pic:3' CGACGGCGACGGCTGCCGACGGA 5'& ||| ||| |||||.. &5' ---GCCACTGAAAA-GGCTGTT- 3' Ubfd1 mcmv-miR-M87-1 beg:2664 end:2685 pic:3' CGACGGCGACGGCTGCCGACGGA 5'& ||| || |.| ||||||| &5' ---GCC-CTTCTGTAGGCTGCC- 3' Ubfd1 mghv-miR-M1-3 beg:698 end:719 pic:3' TTCGCGTTGAGGACGAGTGGAG 5'& |.| ||| .||||||| &5' ----GTACCTCATTTTCACCTC 3' Ubfd1 mghv-miR-M1-5 beg:2757 end:2778 pic:3' CTCTGCT-GGGCTA---GAGTTGAGA 5'& || ||.|. ||||.||| &5' -----GAGCCTGGGTCCCTCAGCTC- 3' Ubfd1 mghv-miR-M1-7-5p beg:789 end:808 pic:3' TCCAATGGCGTGGAGGTGGAAA 5'& .|||| || ||||| |||. &5' GGGTT-CC-CACCT-CACT--- 3' Ubfd1 mghv-miR-M1-8 beg:2103 end:2124 pic:3' CTGGTTTGGGGGTCACTCACGA 5'& ||||||| ||.| ||||| &5' GACCAAAGCCTCTGTGAG---- 3' Ubfd1 mghv-miR-M1-8 beg:2427 end:2447 pic:3' CTGGTTTGGGGGTCACTCACGA 5'& |||.|||.|. . ||||| &5' GACTAAATCTGT-GTGAG---- 3' Ubfd1 mghv-miR-M1-9 beg:2721 end:2742 pic:3' TTTTTCCAGGTCCGT----TTACACT 5'& |. |||| ||||||| &5' --------CTTGGCAGAAAAATGTGA 3' Ubfd1 mmu-let-7astar beg:3121 end:3145 pic:3' CCTTTC-TGTC-ATCTAACATATC 5'& |||..| |.|| |||| |||||. &5' GGAGGGAATAGATAGA-TGTATG- 3' Ubfd1 mmu-let-7c-2star beg:3121 end:3145 pic:3' CCTTTC-TGTC-ATCTAACATATC 5'& |||..| |.|| |||| |||||. &5' GGAGGGAATAGATAGA-TGTATG- 3' Ubfd1 mmu-let-7g beg:695 end:709 pic:3' TTGACATGTTTGATGATGGAGT 5'& .|. ||||||| &5' -----------TTGGTACCTCA 3' Ubfd1 mmu-let-7i beg:695 end:709 pic:3' TTGTCGTGTTTGATGATGGAGT 5'& .|. ||||||| &5' -----------TTGGTACCTCA 3' Ubfd1 mmu-miR-103 beg:1126 end:1149 pic:3' AGTATCGGGA-CATG---TTACGACGA 5'& ||| || .||||||| &5' ------CCCAGGTTCAGAGATGCTGC- 3' Ubfd1 mmu-miR-105 beg:1784 end:1808 pic:3' TGGTGTTCGTAGACT--CGTGAACC 5'& || | ||| || |||||||| &5' -CC-C-AGCCTCCTCCTGCACTTGG 3' Ubfd1 mmu-miR-106b beg:1004 end:1023 pic:3' TAGACGTGACAGTC-GTGAAAT 5'& ||| |||| ||||||| &5' -----CAC-GTCATACACTTTA 3' Ubfd1 mmu-miR-107 beg:1126 end:1149 pic:3' ACTATCGGGA-CATG---TTACGACGA 5'& ||| || .||||||| &5' ------CCCAGGTTCAGAGATGCTGC- 3' Ubfd1 mmu-miR-1186 beg:2014 end:2034 pic:3' GTACGGAAATTAAGGTCGTGAG 5'& |||| ||||.|||| &5' ---GCCTCCTC--CCAGTACTC 3' Ubfd1 mmu-miR-1188 beg:1422 end:1442 pic:3' AGGACCGGGTTGGAGTGTGGT 5'& ||| ||||.| ||||||. &5' -CCT--CCCAGCGTCACACT- 3' Ubfd1 mmu-miR-1190 beg:3318 end:3340 pic:3' CTGTCTCCCCTTGG--AGTCGACT 5'& .|| | .| |||||||. &5' --TAGTGT---GCAAATCAGCTGG 3' Ubfd1 mmu-miR-1190 beg:2937 end:2957 pic:3' CTGTCTCCCCTTGGAGTCGACT 5'& ||| | |||.||.|| &5' --CAGTAGCT--CCTTAGTTG- 3' Ubfd1 mmu-miR-1194 beg:605 end:621 pic:3' TCCTAGATCGTCAATGAGTAAG 5'& |. |.|||||| &5' --------GTGTGTGCTCATT- 3' Ubfd1 mmu-miR-122 beg:1426 end:1444 pic:3' GTTTGTGGTAACAGTGTGAGGT 5'& ||| ||||||||.. &5' ------CCAGCGTCACACTTT- 3' Ubfd1 mmu-miR-122 beg:3447 end:3468 pic:3' GTTTGTGGTA-ACA--GTGTGAGGT 5'& || || .||||||. &5' ------CCTTGTGGTGTACACTCT- 3' Ubfd1 mmu-miR-1224 beg:2692 end:2714 pic:3' GAG-GTGGAGGGGTCAGGAGTG 5'& || ..|||.||. ||||| &5' -TCATGCCTTCCTTTTCCTC-- 3' Ubfd1 mmu-miR-1224 beg:2012 end:2036 pic:3' GAGGTGGAG--GGGTCAGGAGTG 5'& ||.|||| |||||| ||||. &5' --CCGCCTCCTCCCAGTACTCAT 3' Ubfd1 mmu-miR-124star beg:2434 end:2450 pic:3' TAGTTCCAGGCGACACTTGTGC 5'& ||.| |||||.||. &5' -------TCTG-TGTGAGCAT- 3' Ubfd1 mmu-miR-125b-3p beg:2052 end:2074 pic:3' TCGA-GGGTTCTCGGATTGGGCA 5'& ||| ||||||.||| |||. &5' -GCTGCCCAAGGGCCAAACT--- 3' Ubfd1 mmu-miR-125bstar beg:2711 end:2728 pic:3' TCCAGGGTTCTTGGACTGAACA 5'& || ||. ||||||| &5' ----CCTGAGG---TGACTTG- 3' Ubfd1 mmu-miR-129-5p beg:2999 end:3016 pic:3' CGTTCGGGTCTGGCGTTTTTC 5'& |||| | ||.||| &5' ------CCAGGTCTCAGAAA- 3' Ubfd1 mmu-miR-130b beg:2031 end:2056 pic:3' TACGGGAAAGTAGTAACGTGAC 5'& ||||||| |||.|| | ||| &5' ATGCCCTGCCATTATCCCCCTG 3' Ubfd1 mmu-miR-132 beg:2621 end:2642 pic:3' GCTGGTACCGACA--TCTGACAAT 5'& .||| ||| ||.||||| &5' --GCCA---CTGAAAAGGCTGTT- 3' Ubfd1 mmu-miR-133astar beg:712 end:727 pic:3' TAAACCAAGGTAAAATGGTCG 5'& || |||.|||| &5' --------CCTCTTTGCCAG- 3' Ubfd1 mmu-miR-135astar beg:2157 end:2179 pic:3' GCGGTGCCGAGGTTAGGGATAT 5'& | .|| .| ||.||||| &5' ---CTTGGAGATATTCTCTATA 3' Ubfd1 mmu-miR-135b beg:577 end:599 pic:3' AGTGTATCCTTACTT----TTCGGTAT 5'& .||..||. |||||||| &5' ------GGGGGTGGTGAGTAAGCCATA 3' Ubfd1 mmu-miR-136 beg:561 end:582 pic:3' GGTAGTAGTTTTG-TTTACCTCA 5'& || | .| ||||||.| &5' --ATTGTAT--GCAAAATGGGG- 3' Ubfd1 mmu-miR-138 beg:1964 end:1983 pic:3' GCCGGACTAAGTGTTGTGGTCGA 5'& |||| ||. ..||||| &5' -GGCC-----CATCCTGCCAGC- 3' Ubfd1 mmu-miR-139-5p beg:796 end:812 pic:3' GACCTCTGTGCACGTGACATCT 5'& ||| ||||||.| &5' -------CACCT-CACTGTGG- 3' Ubfd1 mmu-miR-139-5p beg:2895 end:2911 pic:3' GACCTCTGTGCACGT--GACATCT 5'& |||| ||||||| &5' -----------TGCATCCTGTAGA 3' Ubfd1 mmu-miR-140 beg:1636 end:1651 pic:3' GATGGTATCCCATTTTGGTGAC 5'& || |||||.||| &5' ---------GGAAAAACTACT- 3' Ubfd1 mmu-miR-140star beg:3443 end:3460 pic:3' GGCACCAAGATGGGACACCAT 5'& |||. ||.||||||. &5' -----GTTT--CCTTGTGGTG 3' Ubfd1 mmu-miR-140star beg:759 end:782 pic:3' GGCACCAAGA--TGG-GACACCAT 5'& ||| || ||||||| &5' ---TGGGAAGTAACAGCTGTGGT- 3' Ubfd1 mmu-miR-140star beg:790 end:814 pic:3' GGCACCAAGA-TGG---GACACCAT 5'& ||||| ||| |||||||. &5' ----GGTTCCCACCTCACTGTGGTG 3' Ubfd1 mmu-miR-1 beg:2398 end:2418 pic:3' TATGTATGAAGAAATGTAAGGT 5'& ||.|||.||||| |||| &5' -TATATATTTCTTAACAT---- 3' Ubfd1 mmu-miR-143 beg:2083 end:2102 pic:3' CTCGATGTCACGAAGTAGAGT 5'& .|| |.|||. |||.||| &5' -GGC--CGGTGT--CATTTCA 3' Ubfd1 mmu-miR-146a beg:1722 end:1745 pic:3' TTGGGTACCTT-AAGTCAAGAGT 5'& . |||| ||| |||||.| &5' ---TTGTGGATTTTCTGTTCTTA 3' Ubfd1 mmu-miR-146b beg:1722 end:1745 pic:3' TCGGATACCTT-AAGTCAAGAGT 5'& .|.|||| ||| |||||.| &5' ---TTGTGGATTTTCTGTTCTTA 3' Ubfd1 mmu-miR-149 beg:131 end:155 pic:3' CCCT-CACTTCTGTGCCTCGGTCT 5'& || |||. ||| .| ||||||| &5' --GATGTGGTGAC-TGAAGCCAGA 3' Ubfd1 mmu-miR-151-3p beg:3593 end:3611 pic:3' GGA-GTTCCTCGGAGTCAGATC 5'& ||| .||| |.|||||| &5' CCTGTAAGA----TTAGTCTA- 3' Ubfd1 mmu-miR-151-5p beg:3435 end:3454 pic:3' TGATC-TGACACTCGAGGAGCT 5'& || ||| || .||||.| &5' ---AGTACTATGT-TTCCTTG- 3' Ubfd1 mmu-miR-151-5p beg:72 end:94 pic:3' TGATCTGACA-CTCGAGGAGCT 5'& ||.||.|| |||.||. || &5' -CTGGATTGCAGAGTTCTGGGA 3' Ubfd1 mmu-miR-152 beg:3532 end:3542 pic:3' GGTTCAAGACAGTACGTGACT 5'& |||.||| &5' -------------TGCGCTG- 3' Ubfd1 mmu-miR-15a beg:2740 end:2758 pic:3' GTGT-TTGGTAATACACGACGAT 5'& |||| ||| |||||||. &5' CACATAAC-------TGCTGCTG 3' Ubfd1 mmu-miR-15a beg:2942 end:2962 pic:3' GTGTTTGGTAATACACGACGAT 5'& .| || ||| ||||||| &5' -GCT--CC-TTAGTTGCTGCT- 3' Ubfd1 mmu-miR-15a beg:732 end:748 pic:3' GTGTTTGGTAATACACGACGAT 5'& ||| |||||||||. &5' ------CCA---TGTGCTGCTG 3' Ubfd1 mmu-miR-15a beg:943 end:965 pic:3' GTGTTTGGTAATACACGACGAT 5'& ||||. |.| || ||||||| &5' CACAGCCTAGGATTTGCTGCT- 3' Ubfd1 mmu-miR-15a beg:1329 end:1349 pic:3' GTGTTTGGTAATACACGACGAT 5'& | | || |||||||.| &5' -ATGATCCT---TGTGCTGTT- 3' Ubfd1 mmu-miR-15b beg:2737 end:2758 pic:3' ACATTTG-GTACTACACGACGAT 5'& ||.| ||| |||||||. &5' -GTGATCACATAAC-TGCTGCTG 3' Ubfd1 mmu-miR-15b beg:2945 end:2962 pic:3' ACATTTGGTACTACACGACGAT 5'& || ||||||| &5' ------CCTTAGT-TGCTGCT- 3' Ubfd1 mmu-miR-15b beg:732 end:750 pic:3' ACATTTGGTACTAC-ACGACGAT 5'& ||||| || ||||||| &5' ------CCATG-TGCTGCTGCT- 3' Ubfd1 mmu-miR-15b beg:944 end:965 pic:3' ACATTTGGTA-CTACACGACGAT 5'& |.|| ||| ||||||| &5' ----AGCCTAGGATTTGCTGCT- 3' Ubfd1 mmu-miR-15b beg:1325 end:1349 pic:3' ACATTTGGTACT-ACACGACGAT 5'& ||..|. || |||||||.| &5' -GTGGATGATCCTTGTGCTGTT- 3' Ubfd1 mmu-miR-15b beg:1357 end:1368 pic:3' ACATTTGGTACTACACGACGAT 5'& |||||||. &5' --------------TGCTGCTG 3' Ubfd1 mmu-miR-16 beg:1347 end:1368 pic:3' GCGGTTATAAATGCACGACGAT 5'& ||. .||| . |||||||. &5' -GCT---GTTTCTCTGCTGCTG 3' Ubfd1 mmu-miR-16 beg:2746 end:2758 pic:3' GCGGTTATAAATGCACGACGAT 5'& || |||||||. &5' -----------AC-TGCTGCTG 3' Ubfd1 mmu-miR-16 beg:2942 end:2962 pic:3' GCGGTTATAAATGCACGACGAT 5'& ||. ||| ||||||| &5' -GCTCC---TTAGTTGCTGCT- 3' Ubfd1 mmu-miR-16 beg:734 end:748 pic:3' GCGGTTATAAATGCACGACGAT 5'& |.||||||||. &5' -----------ATGTGCTGCTG 3' Ubfd1 mmu-miR-16 beg:945 end:965 pic:3' GCGGTTATAAATGCACGACGAT 5'& ||| |. ||||||| &5' -GCCTAGG---ATTTGCTGCT- 3' Ubfd1 mmu-miR-182 beg:2308 end:2321 pic:3' GCCACACTCAAGATGGTAACGGTTT 5'& || |||||.| &5' ---------------CAGTGCCAGA 3' Ubfd1 mmu-miR-182 beg:2991 end:3005 pic:3' GCCACACTCAAGATGGTAACGGTTT 5'& ||| ||||||||. &5' -----------CTA-CATTGCCAG- 3' Ubfd1 mmu-miR-182 beg:3157 end:3176 pic:3' GCCACACTCAAGATGGTA-ACGGTTT 5'& ||| |||| |||||| &5' ---------TTCACCCATCTGCCAA- 3' Ubfd1 mmu-miR-182 beg:708 end:726 pic:3' GCCACACTCAAGATGGT--AACGGTTT 5'& ||| ||| ||||||. &5' ---------TTC-ACCTCTTTGCCAG- 3' Ubfd1 mmu-miR-183 beg:979 end:1001 pic:3' TCACTTAAGATGGTC--ACGGTAT 5'& |||. .||.| ||||||| &5' --TGAGGA--GCCGGCTTGCCATA 3' Ubfd1 mmu-miR-1839-3p beg:1981 end:2002 pic:3' CGACAACCATCTATTCATCCAGA 5'& ||||| | ||.|||| &5' -CTGTTTTCTGT---GTGGGTC- 3' Ubfd1 mmu-miR-185 beg:394 end:408 pic:3' AGTCCTTGACGGAAAGAGAGGT 5'& |||||||.||. &5' ----------CCTTTCTTTCT- 3' Ubfd1 mmu-miR-188-3p beg:2402 end:2424 pic:3' ACGTTTGGGAC-GTACACCCTC 5'& .| .|.| ||||||||| &5' --TATTTCTTAACATGTGGGA- 3' Ubfd1 mmu-miR-1894-3p beg:3090 end:3110 pic:3' GAGGGAAGTGGGAGAGGGAACG 5'& ||| .||||.|.|.|||| &5' ---CCT--GCCCTTTTCTTTGC 3' Ubfd1 mmu-miR-1896 beg:1121 end:1143 pic:3' GAGGAGT--GGGTGGTAGTCTCTC 5'& |||. |||| ||||||| &5' --CCTTTATCCCAGGTTCAGAGA- 3' Ubfd1 mmu-miR-18a beg:1832 end:1851 pic:3' GATAGACGTG-ATCTACGTGGAAT 5'& ||| |||| |||.||| &5' ------GCAGGTAGA-GCATCTT- 3' Ubfd1 mmu-miR-18b beg:1828 end:1851 pic:3' GATTGTCGTG-ATCTACGTGGAAT 5'& |. ||| |||| |||.||| &5' --AGTGGCAGGTAGA-GCATCTT- 3' Ubfd1 mmu-miR-1902 beg:1697 end:1717 pic:3' TTCAGTACGGAT--GACGTGGAGA 5'& |||||. .|||||||| &5' ------TGCCTGTGTTGCACCTC- 3' Ubfd1 mmu-miR-1902 beg:689 end:708 pic:3' TTCAGTACGGATGACGTGGAGA 5'& || |.| |.||||| &5' ---TCT--CTTTTGGTACCTC- 3' Ubfd1 mmu-miR-1906 beg:2033 end:2060 pic:3' TCGGGACGG----AGTCCGACGACGT 5'& |||||||| || ||||||| &5' -GCCCTGCCATTATCCCCCTGCTGC- 3' Ubfd1 mmu-miR-1906 beg:2941 end:2961 pic:3' TCGGGACGGAGTCCGACGACGT 5'& |||. |||.| |.|||||| &5' AGCT---CCTTA-GTTGCTGC- 3' Ubfd1 mmu-miR-1906 beg:727 end:749 pic:3' TCGGGACGGAGT--C-CGACGACGT 5'& |.|| |.|| | |||||||| &5' --CTCT-CTTCCATGTGCTGCTGC- 3' Ubfd1 mmu-miR-1907 beg:1081 end:1103 pic:3' TGGAGGT---CTAGGAGACGACGAG 5'& ||||| |.||||. |||||| &5' --CTCCATTCGGTCCTT--CTGCTC 3' Ubfd1 mmu-miR-1907 beg:2737 end:2758 pic:3' TGGAGGTCTAGGA----GACGACGAG 5'& |||| |||||||| &5' -------GATCACATAACTGCTGCT- 3' Ubfd1 mmu-miR-1907 beg:2943 end:2963 pic:3' TGGAGGTCTAGGAGACGACGAG 5'& |||| |. .|||||||. &5' --CTCC---TTAGTTGCTGCTT 3' Ubfd1 mmu-miR-1907 beg:729 end:751 pic:3' TGGAGGTCTAGGAGACGACGAG 5'& |.|||| .| ||||||||. &5' -CTTCCATGTG--CTGCTGCTT 3' Ubfd1 mmu-miR-1907 beg:945 end:966 pic:3' TGGAGGTCTAGGAGACGACGAG 5'& .||| .|||. |||||||| &5' GCCTA-GGATT---TGCTGCTC 3' Ubfd1 mmu-miR-1907 beg:1345 end:1367 pic:3' TGGAGGTCTAGGAGACGACGAG 5'& ..| | |.|||||||||| &5' -TTTGCTGTTTCTCTGCTGCT- 3' Ubfd1 mmu-miR-192 beg:1162 end:1184 pic:3' CCGACAGTTAAG--TATCCAGTC 5'& ||| .|.|||||| &5' ----GTCTGACCCAGTGGGTCAG 3' Ubfd1 mmu-miR-1927 beg:3403 end:3423 pic:3' AGTCAGGGATTGTAGGTCTCCAG 5'& ||| |.| | ||||||| &5' -CAGA-CTTC---TGCAGAGGT- 3' Ubfd1 mmu-miR-1927 beg:136 end:158 pic:3' AGTCAGGGATTGTAGGTCTCCAG 5'& .|| ||.| |||||||| &5' --GGTGACTGAAG-CCAGAGGT- 3' Ubfd1 mmu-miR-1928 beg:2606 end:2626 pic:3' CTCGACC-GT--TACATCGA 5'& ||| | || ||||||| &5' --GCTTGTCATCATGTAGC- 3' Ubfd1 mmu-miR-1929 beg:438 end:458 pic:3' GAGACGAGATATTTCAGGATCTT 5'& .|.||| |||||||| &5' -----TTTTATTTT-TCCTAGAA 3' Ubfd1 mmu-miR-1929 beg:3284 end:3306 pic:3' GAGACGAGATATTTCAGGATCTT 5'& || || || |.| ||||||| &5' --CTTCTTCAT-AGG-CCTAGAA 3' Ubfd1 mmu-miR-1931 beg:2825 end:2845 pic:3' CGGTAGCGTGGTCGGGAACGTA 5'& |||| | |. .|||.||||| &5' -CCAT-G-ATGGGCCTTTGCA- 3' Ubfd1 mmu-miR-1935 beg:2598 end:2613 pic:3' TCTCTAGGCGGTCGGAGACGGA 5'& ||. |||||||.| &5' --------GCT--CCTCTGCTT 3' Ubfd1 mmu-miR-1935 beg:1646 end:1657 pic:3' TCTCTAGGCGGTCGGAGACGGA 5'& ||||||.| &5' --------------CTCTGCTT 3' Ubfd1 mmu-miR-1937c beg:83 end:94 pic:3' ACCCCCGAGAAGGCCCTA 5'& |||.|||| &5' ---------TTCTGGGA- 3' Ubfd1 mmu-miR-1938 beg:786 end:803 pic:3' CTGGCTTGATGTTC-AGGGTGGC 5'& || ..| ||||||| &5' --------TAGGGGTTCCCACC- 3' Ubfd1 mmu-miR-193star beg:953 end:974 pic:3' AGTAGAACGGGCGT--TTCTGGGT 5'& .||| |.|| |||.||| &5' ----TTTG-CTGCTCCAAGGCCC- 3' Ubfd1 mmu-miR-1942 beg:1616 end:1636 pic:3' GTTGGTCTACTTCTGTAGACT 5'& .||| | .||||||. &5' --GCCAAGTTAT-GCATCTGG 3' Ubfd1 mmu-miR-1946b beg:2911 end:2932 pic:3' TTTTCGTACACGGTGGTGACGGGCCG 5'& ||.| ||| ||||.||. &5' ---AGTAGGGGCC-----TGCCTGGT 3' Ubfd1 mmu-miR-1948 beg:1484 end:1504 pic:3' GACATGCTCACGAGACGGATTT 5'& || ||. .|||||||. &5' -----CGCATGTATTGCCTAAG 3' Ubfd1 mmu-miR-1948 beg:2912 end:2931 pic:3' GACATGCTCACGAGACGGATTT 5'& ||| |.| || ||||||.. &5' --GTA-GGG-GC-CTGCCTGG- 3' Ubfd1 mmu-miR-1949 beg:1593 end:1612 pic:3' TTGATACGACTGTAGGACCATATC 5'& |||| |. ||||.|| &5' -----TGCTTT--TTGTGGTGTA- 3' Ubfd1 mmu-miR-1949 beg:3439 end:3462 pic:3' TTGATACGACTGTAGGACCATATC 5'& ||||||.| | |. ||||.|| &5' -ACTATGTTTCC-TTGTGGTGTA- 3' Ubfd1 mmu-miR-1949 beg:771 end:791 pic:3' TTGATACGACTGTAGGACCATATC 5'& |||| .||.||||.||| &5' ------GCTGTGGTCTTGGTGTAG 3' Ubfd1 mmu-miR-195 beg:1347 end:1368 pic:3' CGGTTATAAAGACACGACGAT 5'& ||. .||||| |||||||. &5' GCT---GTTTCTCTGCTGCTG 3' Ubfd1 mmu-miR-195 beg:2950 end:2962 pic:3' CGGTTATAAAGAC-ACGACGAT 5'& | ||||||| &5' ------------GTTGCTGCT- 3' Ubfd1 mmu-miR-195 beg:735 end:748 pic:3' CGGTTATAAAGACACGACGAT 5'& |||||||||. &5' -----------TGTGCTGCTG 3' Ubfd1 mmu-miR-195 beg:945 end:965 pic:3' CGGTTA-TAAAGACACGACGAT 5'& ||| ||| ||||||| &5' GCCTAGGATT----TGCTGCT- 3' Ubfd1 mmu-miR-195 beg:2748 end:2758 pic:3' CGGTTATAAAGACACGACGAT 5'& |||||||. &5' -------------TGCTGCTG 3' Ubfd1 mmu-miR-1953 beg:2945 end:2967 pic:3' GTCTTCGGACTCT----TGAAAGGGT 5'& ||| || .||||||| &5' ------CCTTAGTTGCTGCTTTCCC- 3' Ubfd1 mmu-miR-1953 beg:3165 end:3183 pic:3' GTCTTCGGACTCTTGAAAGGGT 5'& .||| |||||||.| &5' ------TCTGCCAACTTTCTC- 3' Ubfd1 mmu-miR-1953 beg:3389 end:3406 pic:3' GTCTTCGGACTCTTGAAAGGGT 5'& ||| ||||||.| &5' ------CCTTAC--CTTTCCTA 3' Ubfd1 mmu-miR-1954 beg:3402 end:3419 pic:3' TTGTCCCAGAGTG-AGACGTCA 5'& |||| || ||||||| &5' -ACAG------ACTTCTGCAG- 3' Ubfd1 mmu-miR-1954 beg:2832 end:2847 pic:3' TTGTCCCAGAGTGAGACGTCA 5'& ||| | ||.||||| &5' ----GGG-C---CTTTGCAG- 3' Ubfd1 mmu-miR-1955 beg:75 end:96 pic:3' TTTTCGACGTCACGTAGGACCCTGA 5'& .||||| .|.|||||||| &5' -----TTGCAGA--GTTCTGGGACT 3' Ubfd1 mmu-miR-1956 beg:58 end:80 pic:3' AGGCGACTGAGTCGGGACCTGA 5'& ||||| || |||||||.| &5' TCCGCAG---CATCCCTGGATT 3' Ubfd1 mmu-miR-1957 beg:1863 end:1884 pic:3' CAGTATACGAGATGGTGAC 5'& ||||| || |.|.||| || &5' GTCATTTG-TTTGCCAATG 3' Ubfd1 mmu-miR-1957 beg:733 end:754 pic:3' CAGTATACGA-GATGGTGAC 5'& |||.|||| ||.|. | &5' --CATGTGCTGCTGCTTGGG 3' Ubfd1 mmu-miR-1958 beg:3378 end:3406 pic:3' TGAATGAC-----GAAGGT---GAAAGGAT 5'& ||| ||||| |||||||| &5' -----CTGAGAACCTTCCTTACCTTTCCTA 3' Ubfd1 mmu-miR-1958 beg:383 end:409 pic:3' TGAATGAC-GAAGGT--GAAAGGAT 5'& ||| || .|||| |||||.| &5' -CTTTCTTTTTTCCTTTCTTTCTT- 3' Ubfd1 mmu-miR-1958 beg:417 end:433 pic:3' TGAATGACGAAGGTGAAAGGAT 5'& |||. |||||.| &5' --------CTTTTCCTTTCTT- 3' Ubfd1 mmu-miR-1958 beg:194 end:214 pic:3' TGAATGACGAAGGTGAAAGGAT 5'& || | |||| |||||.|. &5' ----ACCGGTTCC-CTTTCTTG 3' Ubfd1 mmu-miR-1958 beg:2695 end:2713 pic:3' TGAATGAC-GAAGGTGAAAGGAT 5'& || ||||| .|||||| &5' ------TGCCTTCC-TTTTCCT- 3' Ubfd1 mmu-miR-1958 beg:374 end:400 pic:3' TGAATGAC-GAAGGT-GAAAGGAT 5'& .||||.| |||.| .|||||| &5' GCTTATTTTCTTTCTTTTTTCCT- 3' Ubfd1 mmu-miR-1958 beg:437 end:455 pic:3' TGAATGACGAAGGT-GAAAGGAT 5'& |||..| .||||||| &5' --------CTTTTATTTTTCCTA 3' Ubfd1 mmu-miR-1959 beg:58 end:75 pic:3' GAGGTGACTCGATGTAGGGG 5'& |||.| .||||||. &5' -TCCGCA-----GCATCCCT 3' Ubfd1 mmu-miR-1961 beg:691 end:709 pic:3' AAGATTGATGATGGAGT 5'& ||| .|. ||||||| &5' -TCTT-TTGGTACCTCA 3' Ubfd1 mmu-miR-1962 beg:1575 end:1596 pic:3' TACACAGGGTCACG--GTCGGAGA 5'& | |||| |||||||| &5' ----G-CCCACATAGACAGCCTCT 3' Ubfd1 mmu-miR-1962 beg:1773 end:1795 pic:3' TACAC-AGGGTCACGGTCGGAGA 5'& || |||. || |||||||| &5' ---TGCTCCTTGTCCCAGCCTC- 3' Ubfd1 mmu-miR-1962 beg:672 end:695 pic:3' TACACAGGGTC---ACGGTCGGAGA 5'& ||||| ||||||..||| &5' -----TCCCAAAGATGCCAGTTTCT 3' Ubfd1 mmu-miR-1962 beg:891 end:911 pic:3' TACACAGGGTCACGGTCGGAGA 5'& || |.. || ||||||. &5' ---TG-CTTGTTGACAGCCTT- 3' Ubfd1 mmu-miR-1966 beg:713 end:735 pic:3' CTGAGAGAGGACTCGGT-CGAGGGAA 5'& |||.| |||| ||||.||| &5' ------CTCTTT-GCCAGGCTCTCTT 3' Ubfd1 mmu-miR-1967 beg:1076 end:1097 pic:3' CGTAGAAGAGGGGTCCTAGGAGT 5'& ||||||| |.||||. &5' ----CTTCTCCATTCGGTCCTT- 3' Ubfd1 mmu-miR-1967 beg:2923 end:2942 pic:3' CGTAGAAGAGGGGTC---CTAGGAGT 5'& || | |.|||||| &5' ----------CCTGGTAAGGTCCTCA 3' Ubfd1 mmu-miR-1968 beg:757 end:779 pic:3' TCAGGTGGTAGGAATTGTCGACGT 5'& ||. . |||||||||. &5' ----CATGGGAAGTAACAGCTGT- 3' Ubfd1 mmu-miR-196a beg:1688 end:1706 pic:3' GGGTTGTTGTACTTTGATGGAT 5'& |||| ||||||.|||. &5' -CCAA------GAAACTGCCTG 3' Ubfd1 mmu-miR-196a beg:2056 end:2078 pic:3' GGGTTGTTGTACTTTGATGGAT 5'& ||||| ..| |||||.|.| &5' CCCAAGGGCC--AAACTGCTT- 3' Ubfd1 mmu-miR-196b beg:1688 end:1706 pic:3' GGGTTGTTGTCCTTTGATGGAT 5'& |||| ||||||.|||. &5' -CCAA------GAAACTGCCTG 3' Ubfd1 mmu-miR-196b beg:2056 end:2078 pic:3' GGGTTGTTGTCCTTTGATGGAT 5'& ||||| ..| |||||.|.| &5' CCCAAGGGCC--AAACTGCTT- 3' Ubfd1 mmu-miR-1970 beg:2641 end:2662 pic:3' GTTTCGGATAGGGG-TCACTGTGT 5'& || |||. | ||||.||| &5' -----CCCATCTGCAAGTGGCAC- 3' Ubfd1 mmu-miR-1971 beg:2826 end:2845 pic:3' AGAGTCG-GGTCGGAAATG 5'& || . .||||||.| &5' ---CATGATGGGCCTTTGC 3' Ubfd1 mmu-miR-1971 beg:901 end:917 pic:3' AGAGTCGGGTCGGAAATG 5'& |||||. |||||| &5' ---CAGCCTT-CCTTTA- 3' Ubfd1 mmu-miR-1971 beg:2028 end:2049 pic:3' AGAGT-CGGGTCGGAAATG 5'& |||| |||| ||| |||. &5' -CTCATGCCCTGCCATTAT 3' Ubfd1 mmu-miR-1981 beg:2381 end:2404 pic:3' CGGTGCAGATT-CGGGTCGGAAATG 5'& ||| | |||.|||||. &5' -----GTCCCGTGAACAGTCTTTAT 3' Ubfd1 mmu-miR-1982.1 beg:1403 end:1423 pic:3' GACACCCTC-TTGTATCCCACTCT 5'& || || .| ||||||| &5' -------AGTAAGGTTTGGTGAGA 3' Ubfd1 mmu-miR-1982.1 beg:3350 end:3361 pic:3' GACACCCTCTTGTATCCCACTCT 5'& ||||||.| &5' --------------AGGGTGGG- 3' Ubfd1 mmu-miR-1982star beg:1032 end:1053 pic:3' GGAGGGGTCCTGGGAGGGTT 5'& ||.||||| ||.| |..|| &5' -CTTCCCAGAACTC-CTTAA 3' Ubfd1 mmu-miR-1982star beg:1777 end:1797 pic:3' GGAG--GGGTCCTGGGAGGGTT 5'& |||. ||||| .||||| &5' CCTTGTCCCAGCCTCCTCC--- 3' Ubfd1 mmu-miR-199a-3p beg:1265 end:1283 pic:3' ATTGGTTACACGTCTGATGACA 5'& | ||||| |||.|||| &5' ----C-ATGTGA--ACTGCTGT 3' Ubfd1 mmu-miR-199b beg:1252 end:1283 pic:3' ATTGGTT-ACACGT-----C-TGATGACA 5'& |.||| ||||.| | |||.|||| &5' TGACCTTCTGTGTACATGTGAACTGCTGT 3' Ubfd1 mmu-miR-200bstar beg:3586 end:3606 pic:3' AGGTTACGAC-GGGTCATTCTAC 5'& ||.| .|| ||||||| &5' -----TGTTTATCCTGTAAGAT- 3' Ubfd1 mmu-miR-200c beg:2344 end:2367 pic:3' AGGTAGTAATGG-GCCGTCATAAT 5'& |..|| ..| | |||||||| &5' -CTGTCTGGGTCACAGCAGTATT- 3' Ubfd1 mmu-miR-202-3p beg:726 end:751 pic:3' AGA-AGGGTACGCGAT-ATGGAGA 5'& ||| |.|||||.|||. |.|.| &5' TCTCTTCCATGTGCTGCTGCTT-- 3' Ubfd1 mmu-miR-202-3p beg:689 end:708 pic:3' AGAAGGGTACGCGATATGGAGA 5'& .|||.| .|||||| &5' -TTTCTCTTTTG--GTACCTC- 3' Ubfd1 mmu-miR-204 beg:3107 end:3128 pic:3' TCCGTATCCTACTG-TTTCCCTT 5'& || ||||| .||||||. &5' --GC-TAGGAGCCAAGAAGGGAG 3' Ubfd1 mmu-miR-204 beg:3032 end:3043 pic:3' TCCGTATCCTACTGTTTCCCTT 5'& .||||||| &5' --------------GAAGGGAA 3' Ubfd1 mmu-miR-205 beg:3055 end:3070 pic:3' GTCTGAGGCCACCTTACTTCCT 5'& ||| ||.|||| &5' ---------GTGCC-TGGAGGA 3' Ubfd1 mmu-miR-205 beg:27 end:46 pic:3' GTCTGAGGCCACCTTACTTCCT 5'& ||| || |.||||||| &5' --GAC-CCAA---AGTGAAGGA 3' Ubfd1 mmu-miR-206 beg:2693 end:2712 pic:3' GGTGTGTGAAGGAATGTAAGGT 5'& ||..| ||||||| |||| &5' -CATGC-CTTCCTT---TTCC- 3' Ubfd1 mmu-miR-208b beg:623 end:646 pic:3' TGTTTGG-AAAAC-AAGCAGAATA 5'& ||.|. ||||| ||.||.|| &5' -CAGATAGTTTTGTTTTGTTTT-- 3' Ubfd1 mmu-miR-20a beg:1000 end:1023 pic:3' GATGGACGTGATATTCGTGAAAT 5'& .|| ||| ||||||| &5' --GCCA-CACGTCATACACTTTA 3' Ubfd1 mmu-miR-211 beg:3108 end:3128 pic:3' TCCGTTTCCTACTG-TTTCCCTT 5'& |||| .||||||. &5' ------AGGAGCCAAGAAGGGAG 3' Ubfd1 mmu-miR-211 beg:3032 end:3043 pic:3' TCCGTTTCCTACTGTTTCCCTT 5'& .||||||| &5' --------------GAAGGGAA 3' Ubfd1 mmu-miR-21 beg:1197 end:1219 pic:3' AGTTGTAGTCAGACTATTCGAT 5'& ||||| ||||||.|. &5' -CAACAGAATGG-GATAAGTTG 3' Ubfd1 mmu-miR-212 beg:1442 end:1461 pic:3' ACCGGCACTGACCTC-TGACAAT 5'& |||| .|||||| &5' -------GACTCTTAAGCTGTTA 3' Ubfd1 mmu-miR-2132 beg:3153 end:3174 pic:3' GTAGCGC--AGTT-GTGGGCGG 5'& || ||| ||.|.||| &5' ----GCTTTTCACCCATCTGCC 3' Ubfd1 mmu-miR-2134 beg:2048 end:2066 pic:3' CGTGGGGCAAAGGGTTCTG 5'& |||.| ||||||. &5' ---CCCTGCTGCCCAAGG- 3' Ubfd1 mmu-miR-2135 beg:3398 end:3415 pic:3' CAAAGCCGGGGT-TCTGGAGA 5'& .||.| ||||.||| &5' -------TCCTACAGACTTCT 3' Ubfd1 mmu-miR-2135 beg:953 end:973 pic:3' CAAAGC--CGGGGTTCTGGAGA 5'& ||.| ||.|||||.|| &5' --TTTGCTGCTCCAAGGCC--- 3' Ubfd1 mmu-miR-2136 beg:3149 end:3168 pic:3' GTGTAGAGTC-AGTTGTGGGTC 5'& .| .| |. |||||| &5' -----TTGGGCTTTTCACCCA- 3' Ubfd1 mmu-miR-2140 beg:1787 end:1806 pic:3' TGGTGGTTCTAGACGTGGA 5'& .|| || ||||||.| &5' GCCTCCTC---CTGCACTT 3' Ubfd1 mmu-miR-214 beg:2038 end:2058 pic:3' TGACGGACAGACACGGACGACA 5'& ||||| ||||||| &5' -CTGCCATTATCCCCCTGCTG- 3' Ubfd1 mmu-miR-2141 beg:2004 end:2024 pic:3' TTGAAAAGACTGTGGAGGA 5'& .|| ||| |.|||||| &5' -GCTCTTCAC-CGCCTCCT 3' Ubfd1 mmu-miR-2141 beg:2187 end:2199 pic:3' TTGAAAAGACTGTGGAGGA 5'& ||||||||.. &5' --------TGACACCTTT- 3' Ubfd1 mmu-miR-214 beg:1695 end:1717 pic:3' TGACGGACA-GACACGGACGACA 5'& ||||||||| .|| ||| | &5' ACTGCCTGTGTTGCACCT-C--- 3' Ubfd1 mmu-miR-214 beg:1340 end:1365 pic:3' TGACGGACAGACAC--GGACGACA 5'& .|||..|| |||| .|||||| &5' GCTGTTTG-CTGTTTCTCTGCTG- 3' Ubfd1 mmu-miR-2145 beg:1635 end:1656 pic:3' TTGGTCCG----GGCTGGGACGA 5'& |||| |. ||.||||| &5' ---CAGGAAAAACT-ACTCTGCT 3' Ubfd1 mmu-miR-2145 beg:3197 end:3217 pic:3' TTGGTCCGGGCT--GGGACGA 5'& .||||||.| ||.|| &5' --TCAGGCCTGTTCCCTTG-- 3' Ubfd1 mmu-miR-2146 beg:1068 end:1088 pic:3' GTGTACCTTGG---GAAGAGGTG 5'& |||.. ||||||||. &5' ------GAATTATGCTTCTCCAT 3' Ubfd1 mmu-miR-2146 beg:2197 end:2216 pic:3' GTGTACCTTGGGAAGAGGTG 5'& ||.|||||.|| ||.| &5' CATATGGAGCCGTTTT---- 3' Ubfd1 mmu-miR-214star beg:1826 end:1842 pic:3' CGTGTCGTTCACATCTGTCCGT 5'& |||||| .||||.| &5' ------CAAGTG---GCAGGTA 3' Ubfd1 mmu-miR-214star beg:2672 end:2695 pic:3' CGTGTCGTTC-ACATC--TGTCCGT 5'& |.|.| || ||||||| &5' -----GTAGGCTGCCATCACAGGCA 3' Ubfd1 mmu-miR-2182 beg:1587 end:1611 pic:3' GCGCCGCACCCTTTACACCGCA 5'& || | || |||||.|| &5' -GCCTCTTGCTTTTTGTGGTGT 3' Ubfd1 mmu-miR-2182 beg:804 end:814 pic:3' GCGCCGCACCCTTTACACCGCA 5'& |||||.| &5' --------------TGTGGTG- 3' Ubfd1 mmu-miR-21star beg:1584 end:1606 pic:3' CTGTCGGGTAGCTGAC-GACAAC 5'& |||||||. |.| || .||| &5' GACAGCCTCTTG-CTTTTTGT-- 3' Ubfd1 mmu-miR-220 beg:3442 end:3460 pic:3' TTCACAGACTGTGACACCACC 5'& |||.| | .||||||| &5' ---TGTTTC-C-TTGTGGTG- 3' Ubfd1 mmu-miR-220 beg:801 end:815 pic:3' TTCACAGACTGTGACACCACC 5'& ||||||||||| &5' ----------CACTGTGGTGG 3' Ubfd1 mmu-miR-221 beg:2606 end:2626 pic:3' CTTTGGGTCGT-CTGT--TACATCGA 5'& || | || ||||||| &5' --------GCTTGTCATCATGTAGC- 3' Ubfd1 mmu-miR-22star beg:30 end:47 pic:3' ATTTCGAACGGTG--ACTTCTTGA 5'& ||| |||||.|| &5' ---------CCAAAGTGAAGGAC- 3' Ubfd1 mmu-miR-23a beg:1257 end:1275 pic:3' CCTTTAGGGAC-CGT-TACACTA 5'& ..||| |.| |||||| &5' ------TTCTGTGTACATGTGA- 3' Ubfd1 mmu-miR-23b beg:1257 end:1275 pic:3' CCATTAGGGAC-CGT-TACACTA 5'& ..||| |.| |||||| &5' ------TTCTGTGTACATGTGA- 3' Ubfd1 mmu-miR-24 beg:2333 end:2357 pic:3' GACAAGGAC-GACTTGACTCGGT 5'& ||||. ||| |||.|.|| &5' -TGTTTAGATCTGT-CTGGGTCA 3' Ubfd1 mmu-miR-24 beg:1505 end:1525 pic:3' GACAAGGACGACTTGACTCGGT 5'& || ||||| || ||||||| &5' CTATTCCT--TG---TGAGCCA 3' Ubfd1 mmu-miR-26a beg:2145 end:2164 pic:3' TCGGAT-AGGACCTAATGAACTT 5'& ||.| |||| ||||||.| &5' -GCTTTTTCCT----TACTTGGA 3' Ubfd1 mmu-miR-26b beg:2145 end:2164 pic:3' TGGAT-AGGACTTAATGAACTT 5'& .|.| |||| ||||||.| &5' GCTTTTTCCT----TACTTGGA 3' Ubfd1 mmu-miR-27a beg:1461 end:1480 pic:3' CGCCTTGAATCGGT-----GACACTT 5'& ||| ||||||| &5' ----------GCCCTCATCCTGTGAA 3' Ubfd1 mmu-miR-27a beg:790 end:812 pic:3' CGCCTTGAATC---GGTGACACTT 5'& || .| .|||||||. &5' --GGGGTTCCCACCTCACTGTGG- 3' Ubfd1 mmu-miR-27a beg:1918 end:1935 pic:3' CGCCTTGAATCGGTGACACTT 5'& .||.|.| |||||| &5' ------TTTGGTCTCTGTGA- 3' Ubfd1 mmu-miR-27astar beg:2679 end:2704 pic:3' ACG--AGTGTTCGTCGATTCGGGA 5'& || |||||.||| | |||.| &5' -GCCATCACAGGCATCAT-GCCTT 3' Ubfd1 mmu-miR-27b beg:1461 end:1480 pic:3' CGTCTTGAATCGGT-----GACACTT 5'& ||| ||||||| &5' ----------GCCCTCATCCTGTGAA 3' Ubfd1 mmu-miR-27b beg:800 end:811 pic:3' CGTCTTGAATCGGTGACACTT 5'& .|||||||. &5' -----------TCACTGTGG- 3' Ubfd1 mmu-miR-28 beg:2587 end:2607 pic:3' GAGTTATCTGACACTCGAGGAA 5'& |||| .| .|||||| &5' CTCACA--GCAA--GGCTCCT- 3' Ubfd1 mmu-miR-292-5p beg:3485 end:3505 pic:3' GTTTTCTCGGGGGTCAAACTCA 5'& ||||| |||. |||||.| &5' CAAAAC-GCCT---GTTTGGG- 3' Ubfd1 mmu-miR-293 beg:2643 end:2663 pic:3' TGT-GATGTTTGAGACGCCGTGA 5'& || ||.||| |.|||||| &5' -CATCTGCAA-----GTGGCACT 3' Ubfd1 mmu-miR-293star beg:3489 end:3505 pic:3' GTTTTACAGTGTGT-CAAACTCA 5'& ||.| |||||.| &5' ---------ACGCCTGTTTGGG- 3' Ubfd1 mmu-miR-294star beg:2198 end:2220 pic:3' TCTATCCCGGAGGTAAAACTCA 5'& ||| || ||.|||||||| &5' --ATATGGAG-CCGTTTTGAGT 3' Ubfd1 mmu-miR-296-3p beg:1964 end:1986 pic:3' CCTCTCGG--AGGTGGGTTGGGAG 5'& ||| ||| ||| |||.|||| &5' -GAG-GCCCATCCTGCCAGCCCT- 3' Ubfd1 mmu-miR-296-5p beg:2911 end:2925 pic:3' TGTCCTAACTCCCCCCCGGGA 5'& || ||||||. &5' ---------AGTAGGGGCCT- 3' Ubfd1 mmu-miR-298 beg:2590 end:2612 pic:3' CCCTTCTTGTCGG---GAGGAGACGG 5'& ||||| |||||||||. &5' -------ACAGCAAGGCTCCTCTGCT 3' Ubfd1 mmu-miR-299 beg:1565 end:1586 pic:3' TTCGCCAAATGGCAGGGTGTAT 5'& || || |||||||| &5' ----GGGAATCCAGCCCACATA 3' Ubfd1 mmu-miR-29b beg:2138 end:2151 pic:3' TTGTGACTAAAGTTTACCACGAT 5'& |||||||||| &5' ------------AAATGGTGCT- 3' Ubfd1 mmu-miR-29bstar beg:142 end:154 pic:3' ATTTGGTGGTATACTTTGGTCG 5'& ||||.|||| &5' ------------TGAAGCCAG- 3' Ubfd1 mmu-miR-29c beg:2138 end:2151 pic:3' ATTGGCTAAAGTTTACCACGAT 5'& |||||||||| &5' -----------AAATGGTGCT- 3' Ubfd1 mmu-miR-300 beg:2888 end:2902 pic:3' CTTCTCTCGAACGGGAACGTAT 5'& ||| .|.|||||| &5' --------CTT-TCTTTGCAT- 3' Ubfd1 mmu-miR-302c beg:3058 end:3075 pic:3' GGTGACTTTGTACCTTCGTGAA 5'& | |||.| |.||||.| &5' -C-CTGGA-----GGAGCATT- 3' Ubfd1 mmu-miR-302c beg:3422 end:3444 pic:3' GGTGACT-TTGTACCTTCGTGAA 5'& |||| ||.||| |||.||| &5' ---CTGACAATATGTAAGTACT- 3' Ubfd1 mmu-miR-3099star beg:2555 end:2576 pic:3' GTTCCCGACCTTC-CTTCGACC 5'& ||. ||.||||| &5' ----GGTATCACATGAGGCTGG 3' Ubfd1 mmu-miR-30a beg:1333 end:1352 pic:3' GAAGGTCAGCTCCTACAAATGT 5'& ||| |.| | |||||.| &5' --TCC--TTGT-GCTGTTTGC- 3' Ubfd1 mmu-miR-30astar beg:1291 end:1312 pic:3' CGACGTTTGTAGGCTGACTTTC 5'& || ..||||||||| &5' ---GCCTTGA-TTGACTGAAAG 3' Ubfd1 mmu-miR-30astar beg:129 end:150 pic:3' CGACGTTTGTAGGCTGACTTTC 5'& | | .|||||||. &5' ---GTGATGTGGTGACTGAAG- 3' Ubfd1 mmu-miR-30astar beg:455 end:474 pic:3' CGACGTTTGTAGGCTGACTTTC 5'& | | | |.| ||||||| &5' ---GTGA-C-TTCAACTGAAA- 3' Ubfd1 mmu-miR-30b beg:3575 end:3596 pic:3' TCGACTCACATCCTACAAATGT 5'& ||||| |||| ||||||. &5' AGCTGT-TGTAT--TGTTTAT- 3' Ubfd1 mmu-miR-30bstar beg:1113 end:1134 pic:3' CTGCATTTGTAGGT-GTAGGGTC 5'& ||. ||| .||||||| &5' -----AAGTGTCCTTTATCCCAG 3' Ubfd1 mmu-miR-30c-2star beg:2628 end:2648 pic:3' TCTCATTTGTCGG-AAGAGGGTC 5'& ||| .||. |||||||| &5' -----AAAAGGCTGTTCTCCCA- 3' Ubfd1 mmu-miR-30e beg:1861 end:1879 pic:3' GAAGGTCAGTTCCTACAAATGT 5'& | |||| |||||.| &5' ----CTGTCATT--TGTTTGC- 3' Ubfd1 mmu-miR-30estar beg:129 end:150 pic:3' CGACATTTGTAGGCTGACTTTC 5'& ||.| .|||||||. &5' ---GTGATGTGGTGACTGAAG- 3' Ubfd1 mmu-miR-31 beg:1585 end:1601 pic:3' GTCGATACGGTCGTAGAACGGA 5'& |||| ||||||.| &5' ---------CAGCCTCTTGCTT 3' Ubfd1 mmu-miR-322 beg:2741 end:2759 pic:3' AGGTTTTGTACTTAACGACGAC 5'& |||| || |||||||| &5' ------ACAT-AACTGCTGCTG 3' Ubfd1 mmu-miR-322 beg:2949 end:2962 pic:3' AGGTTTTGTACTTAACGACGAC 5'& |.|||||||| &5' -----------AGTTGCTGCT- 3' Ubfd1 mmu-miR-322 beg:728 end:748 pic:3' AGGTTTTGTACTTAACGACGAC 5'& ||. |||| |||||||| &5' TCTTC--CATG---TGCTGCTG 3' Ubfd1 mmu-miR-324-5p beg:3050 end:3072 pic:3' TGTGGTTACG-GGATCCCCTACGC 5'& ..||||. |||.| ||| || &5' ---TTAATGTGCCTGGAGGA-GC- 3' Ubfd1 mmu-miR-327 beg:2933 end:2954 pic:3' TAGGAGTA--CGGGGAGTTCA 5'& .|||||| ||.|||.|. &5' GTCCTCAGTAGCTCCTTAG-- 3' Ubfd1 mmu-miR-328 beg:2055 end:2070 pic:3' TGCCTTCCCGTCTCTCCCGGTC 5'& || ||||||| &5' --------GCCCA-AGGGCCA- 3' Ubfd1 mmu-miR-328 beg:2864 end:2883 pic:3' TGCCTTCCCGTCTCTCCCGGTC 5'& |||| || ||||.| &5' ---GAAGTTT-GACTGGGCTA- 3' Ubfd1 mmu-miR-335-5p beg:525 end:544 pic:3' TGTAAAAAGCAATAACGAGAACT 5'& |||.||| |||.|.||| &5' -----TTTTGTT-TTGTTTTTG- 3' Ubfd1 mmu-miR-335-5p beg:595 end:623 pic:3' TGTAAAAA-GCAATAACGAG-AACT 5'& |.|||||| .|| ||||| |||| &5' ATATTTTTGTGTGTGTGCTCATTGA 3' Ubfd1 mmu-miR-338-3p beg:3526 end:3547 pic:3' GTTGTTTTAGTGACTACGACCT 5'& .|.| | | ||||||| &5' ---TAGATTTGCGC-TGCTGGA 3' Ubfd1 mmu-miR-33star beg:3055 end:3076 pic:3' CACTACGTGACACCTTTGTAAC 5'& .||| ||| |.|.||||| &5' ---GTGC-CTGGAGGAGCATTG 3' Ubfd1 mmu-miR-342-3p beg:1978 end:2000 pic:3' TGCCCACGCT---AAAGACACACTCT 5'& || ||||||||||.| &5' ------GCCCTGTTTTCTGTGTGGG- 3' Ubfd1 mmu-miR-342-5p beg:63 end:75 pic:3' GAGTTAGTGTCTATCGTGGGGA 5'& ||||.|||| &5' -------------AGCATCCCT 3' Ubfd1 mmu-miR-344 beg:2325 end:2346 pic:3' TGTCAGTCCGAA---ACCGATCTAGT 5'& .|| || .|||||| &5' ------GGGAATAAGTGTTTAGATC- 3' Ubfd1 mmu-miR-345-5p beg:1162 end:1185 pic:3' TTCGTGACCTGATC-CCCAGTCG 5'& |. ||| | || |||||||| &5' --GT-CTGACCCAGTGGGTCAGC 3' Ubfd1 mmu-miR-3471 beg:3532 end:3551 pic:3' TTACGGAATGTCAACCTAGAGT 5'& ||| |.| |||||.|. &5' --TGCGCTGC---TGGATTTT- 3' Ubfd1 mmu-miR-3473 beg:2752 end:2773 pic:3' CCGACTCGG---TAGAGAGGT 5'& |||||||| .|| ||| &5' -GCTGAGCCTGGGTCCCTC-- 3' Ubfd1 mmu-miR-3473 beg:1884 end:1905 pic:3' CCGACTC-GG-TAGAGAGGT 5'& ||||| || .|||. || &5' --CTGAGACCTGTCTTGACA 3' Ubfd1 mmu-miR-3473 beg:1956 end:1981 pic:3' CCG--ACTC--GGTAGAGA-GGT 5'& ||| |||| ||||| || ||| &5' GGCTCTGAGGCCCATC-CTGCCA 3' Ubfd1 mmu-miR-3474 beg:1115 end:1135 pic:3' CTTAGGTGCAGAGG----AGGGTCCC 5'& || ||| ||||||| &5' --------GTGTCCTTTATCCCAGG- 3' Ubfd1 mmu-miR-3475 beg:3304 end:3324 pic:3' AAGTTTGGTACACGGAGGTCT 5'& .|.|| | |||||.|| &5' --TAGACAG-GAGCCTCTAG- 3' Ubfd1 mmu-miR-34a beg:1133 end:1150 pic:3' TGTTGGTCGATTCTGTGACGGT 5'& .||| |||..||||| &5' ----TCAG---AGATGCTGCC- 3' Ubfd1 mmu-miR-34a beg:2667 end:2686 pic:3' TGTTGGTCGATTCTGTGACGGT 5'& || ||. | .|||||| &5' ----CCTTCTGT-AGGCTGCCA 3' Ubfd1 mmu-miR-34b-5p beg:1133 end:1151 pic:3' TGTTAGTCGATTAATGTGACGGA 5'& |||| |..|||||| &5' ----TCAGAG----ATGCTGCCT 3' Ubfd1 mmu-miR-34c beg:2986 end:3004 pic:3' CGTTAGTCGAT-TGATGTGACGGA 5'& || .|||||.|||| &5' --------CTTTGCTACATTGCC- 3' Ubfd1 mmu-miR-375 beg:2375 end:2397 pic:3' AGTGCGCTCGGCTTGCTTGTTT 5'& |||| | ||.| .|||||. &5' TCACTC-AGTCCCGTGAACAG- 3' Ubfd1 mmu-miR-376astar beg:2292 end:2318 pic:3' TGAGTATCTTCC-TCTTAGATGG 5'& .||| |||||| ||| |.|| &5' GCTCTTAGAAGACAGACAGTGCC 3' Ubfd1 mmu-miR-377 beg:1982 end:1998 pic:3' TGTTTTCAACGGAA-ACACACTA 5'& ||..|| ||||||. &5' --------TGTTTTCTGTGTGG- 3' Ubfd1 mmu-miR-379 beg:3593 end:3616 pic:3' GGATGCAAGGTATCAGATGGT 5'& |||. |||||||.|| &5' CCTGTAAGAT-TAGTCTATCA 3' Ubfd1 mmu-miR-380-3p beg:2980 end:3000 pic:3' TTCTACACCTGGTATGATGTAT 5'& .||||| ||. |.|||||| &5' GAGATGA--ACTTTGCTACAT- 3' Ubfd1 mmu-miR-384-5p beg:3576 end:3596 pic:3' TGTAACGGATCCTTAACAAATGT 5'& ||. ||||||||. &5' -----GCTGTTGTATTGTTTAT- 3' Ubfd1 mmu-miR-423-5p beg:1535 end:1550 pic:3' TTTCAGAGCGAGAGACGGGGAGT 5'& |.| |||||.|| &5' ----------TTTATGCCCTTC- 3' Ubfd1 mmu-miR-423-5p beg:2454 end:2467 pic:3' TTTCAGAGCGAGAGACGGGGAGT 5'& |||| |||.|.| &5' -----------CTCTTCCCTTTA 3' Ubfd1 mmu-miR-431star beg:2288 end:2312 pic:3' TCTTCGGGACG-TTCTG-CTGGAC 5'& ||||||.|| ||||| ||| &5' AGAAGCTCTTAGAAGACAGAC--- 3' Ubfd1 mmu-miR-432 beg:2083 end:2102 pic:3' GACGGGTGACTAGATGAGGTTCT 5'& | ||. || || |.|.|||| &5' --GGCCGGTG-TC-ATTTCAAG- 3' Ubfd1 mmu-miR-448 beg:3310 end:3331 pic:3' TACCCTGTAGGATGTATACGTT 5'& || | ||. .|.||||| &5' --GGAGCCTCTA--GTGTGCAA 3' Ubfd1 mmu-miR-448 beg:3417 end:3439 pic:3' TAC-CCTGTAGGATG-TATACGTT 5'& | || .|||. || |||||.|| &5' --GAGG-TATCTGACAATATGTAA 3' Ubfd1 mmu-miR-449a beg:1130 end:1150 pic:3' TGGTCGATTGTTATGTGACGGT 5'& ||| | .| |..||||| &5' --CAGGTTCAGAGATGCTGCC- 3' Ubfd1 mmu-miR-449a beg:2664 end:2686 pic:3' TGGTCGATT-GTTATGTGACGGT 5'& .|| | .|| .|||||| &5' ---GGCCCTTCTGTAGGCTGCCA 3' Ubfd1 mmu-miR-450a-3p beg:2478 end:2498 pic:3' TACTTACGTTTCGTAGGGGTTA 5'& | |||. |||.||. &5' --GTATGTTTTT--TCCTCAG- 3' Ubfd1 mmu-miR-450a-3p beg:1025 end:1043 pic:3' TACTTACGTTTCGTAGGGGTTA 5'& || .|||| |.||||. &5' -----TGGGAAGC-TTCCCAG- 3' Ubfd1 mmu-miR-450b-5p beg:2890 end:2911 pic:3' ATAAGTCCTTGTATGACGTTTT 5'& ||| .||| |||.|.| &5' --TTCTTT-GCATCCTGTAGA- 3' Ubfd1 mmu-miR-450b-5p beg:3403 end:3421 pic:3' ATAAGTCCTTGTATGACGTTTT 5'& ||| || |||||.|. &5' ----CAG--ACTT-CTGCAGAG 3' Ubfd1 mmu-miR-450b-5p beg:2635 end:2656 pic:3' ATAAGTCCTTGTATGACGTTTT 5'& |.||| ||| ||||||. &5' TGTTCTCC--CAT-CTGCAAG- 3' Ubfd1 mmu-miR-455 beg:603 end:626 pic:3' CACATATACGGGCACCTGACG 5'& ||||.|.|||.| ||.| | &5' GTGTGTGTGCTCATTGATT-C 3' Ubfd1 mmu-miR-464 beg:2794 end:2814 pic:3' ATAGAGTGTCTTATTTGAACCAT 5'& | |||.| ||||||| &5' ----TTGCAGGACT--CTTGGTA 3' Ubfd1 mmu-miR-466a-5p beg:1259 end:1280 pic:3' ATACATGTACATGTGTGTGTAT 5'& |.|||||||||. || ..| &5' TGTGTACATGTGAAC-TGC--- 3' Ubfd1 mmu-miR-466e-5p beg:1259 end:1284 pic:3' ATACATGTACATGTG-TGTGTAG 5'& |.|||||||||. || .| ..|| &5' TGTGTACATGTGAACTGC-TGTC 3' Ubfd1 mmu-miR-467g beg:593 end:615 pic:3' TATATAC--ACACACATACATAT 5'& |||||| |||||||.|| &5' ATATATTTTTGTGTGTGTG---- 3' Ubfd1 mmu-miR-470 beg:1801 end:1823 pic:3' TGAGTGGTCACGGTCAGGTTCTT 5'& |||.. ||| ||| .||||.| &5' ACTTGGCAG-GCCTA-TCAAGGA 3' Ubfd1 mmu-miR-470 beg:3104 end:3123 pic:3' TGAGTGGTCACGGTCA--GGTTCTT 5'& |||.|| ||||||| &5' ---------TGCTAGGAGCCAAGAA 3' Ubfd1 mmu-miR-470 beg:3257 end:3279 pic:3' TGAGTGGTCACGGTCAGGTTCTT 5'& |||. ||||| ||| . ||| &5' ACTT-CCAGT--CAGGATCAGA- 3' Ubfd1 mmu-miR-483 beg:381 end:405 pic:3' GAGGGAAGAGAAGAGGGCAGAA 5'& |.|.||||.||.|||. |||| &5' -TTCTTTCTTTTTTCCTTTCTT 3' Ubfd1 mmu-miR-488 beg:3143 end:3164 pic:3' CTGGTTCTTTGTCGGAAAGTT 5'& .|||||. .||.||||| &5' -GCCAAGGTTGGGCTTTTCA- 3' Ubfd1 mmu-miR-488 beg:2971 end:2993 pic:3' CTGG-TTCTTTGTCGGAAAGTT 5'& |.|| ||||.|.. |||| &5' GGCCAAAGAGATGAACTTT--- 3' Ubfd1 mmu-miR-488 beg:0 end:12 pic:3' CTGGTTCTTTGTCG-GAAAGTT 5'& ||| |||||| &5' -----------AGCACTTTCA- 3' Ubfd1 mmu-miR-488star beg:2343 end:2354 pic:3' AACTCTCACGATAATAGACCC 5'& |.|||||| &5' -------------TGTCTGGG 3' Ubfd1 mmu-miR-490 beg:1117 end:1137 pic:3' GTCGTACCTCAGGA-----GGTCCAAC 5'& ||||| ||||||| &5' ---------GTCCTTTATCCCAGGTT- 3' Ubfd1 mmu-miR-493 beg:1240 end:1262 pic:3' GGACCGTGTGTCATC-CTGGAAGT 5'& ||||. .|| ||||||| &5' -CTGGTTT-TAGCCCTGACCTTC- 3' Ubfd1 mmu-miR-493 beg:1699 end:1736 pic:3' GGAC----CGTGT-GTCAT--------CCTGGAAGT 5'& |||| |||| ||||. |||..||| &5' CCTGTGTTGCACCTCAGTGATAGTTGTGGATTTTC- 3' Ubfd1 mmu-miR-495 beg:3464 end:3482 pic:3' TTCTTCACGTGGTACAAACAAA 5'& ||. |. ||||||||| &5' ------TGTTCT-TGTTTGTTT 3' Ubfd1 mmu-miR-496 beg:2014 end:2035 pic:3' CTCTAACCGGTACA---TTATGAGT 5'& ||| |.|||||| &5' -------GCCTCCTCCCAGTACTCA 3' Ubfd1 mmu-miR-497 beg:2737 end:2759 pic:3' ATGTTTGGTGTCAC-ACGACGAC 5'& .|.|||| |||||||| &5' ----GATCACATAACTGCTGCTG 3' Ubfd1 mmu-miR-497 beg:732 end:748 pic:3' ATGTTTGGTGTCACACGACGAC 5'& ||| |||||||||| &5' ------CCA---TGTGCTGCTG 3' Ubfd1 mmu-miR-497 beg:1347 end:1368 pic:3' ATGTTTGGTGTCAC-ACGACGAC 5'& .| . |||||||| &5' -----GCTGTTTCTCTGCTGCTG 3' Ubfd1 mmu-miR-497 beg:2942 end:2962 pic:3' ATGTTTGGTGTCACACGACGAC 5'& .| || .||| ||||||| &5' -GCT--CCTTAGT-TGCTGCT- 3' Ubfd1 mmu-miR-497 beg:944 end:965 pic:3' ATGTTTGGTGTCAC--ACGACGAC 5'& || |.|| .|| ||||||| &5' -AC-AGCC-TAGGATTTGCTGCT- 3' Ubfd1 mmu-miR-499 beg:1881 end:1903 pic:3' TTTGTAGTGACGTT---CAGAATT 5'& .|| ||| |||||.| &5' ----GTCTCTGAGACCTGTCTTGA 3' Ubfd1 mmu-miR-500 beg:1593 end:1614 pic:3' ACTTGGGAACGGGT----CCACGTAA 5'& |||||.. ||||.||| &5' ------CTTGCTTTTTGTGGTGTATT 3' Ubfd1 mmu-miR-501-3p beg:1593 end:1614 pic:3' GTTTAGGAACGG---GC-CCACGTAA 5'& |||||. .| ||||.||| &5' ------CTTGCTTTTTGTGGTGTATT 3' Ubfd1 mmu-miR-503 beg:1346 end:1368 pic:3' GACGTCATGAC-AAG-GGCGACGAT 5'& |.||| ||| |.||||||. &5' ------TGCTGTTTCTCTGCTGCTG 3' Ubfd1 mmu-miR-503 beg:2747 end:2758 pic:3' GACGTCATGACAAGGGCGACGAT 5'& |.||||||. &5' --------------CTGCTGCTG 3' Ubfd1 mmu-miR-503star beg:1992 end:2011 pic:3' GGTCCGTCACCTTT-GTTATGAG 5'& ||||. ||.|.||| &5' -------GTGGGTCCCAGTGCTC 3' Ubfd1 mmu-miR-505 beg:884 end:905 pic:3' TCTTTTGGTCGTTC--ACAACTGC 5'& .| |. | ||||||| &5' -----GCTGGTTTGCTTGTTGAC- 3' Ubfd1 mmu-miR-511 beg:3403 end:3425 pic:3' ACTCACGTCT-----CGTTTTCCGTA 5'& |||| || |.|||.|| &5' ------CAGACTTCTGC-AGAGGTAT 3' Ubfd1 mmu-miR-540-3p beg:1 end:21 pic:3' GGTCCTAGCTGGAGACTGGA 5'& || || |||||||.|| &5' -CACTTTC-ACCTCTGGCC- 3' Ubfd1 mmu-miR-540-3p beg:2245 end:2261 pic:3' GGTCCTAGCTGGAGACTGGA 5'& |.|| |||||.|. &5' ------TTGAGCTCTGGCT- 3' Ubfd1 mmu-miR-540-3p beg:1152 end:1173 pic:3' GGT-CCTAGCTGGAGACTGGA 5'& || ||| ||| ||||||| &5' -CATGGAA-GACGTCTGACC- 3' Ubfd1 mmu-miR-541 beg:3214 end:3233 pic:3' TCACACTGGTTGTAGTCTTAGGGAA 5'& || |. || ..||||| &5' -----GAAAAGGAT---GGTCCCT- 3' Ubfd1 mmu-miR-541 beg:848 end:869 pic:3' TCACACTGGTTGTAGTCTTAGGGAA 5'& |||| ||| |.|||||| &5' -GTGT-ACCCTTT---GGATCCCT- 3' Ubfd1 mmu-miR-542-3p beg:2370 end:2381 pic:3' AAAGTCAATAGTTAGACAGTGT 5'& |.|||||| &5' -------------TTTGTCAC- 3' Ubfd1 mmu-miR-544 beg:2789 end:2805 pic:3' CTCGAACGATTTTTACGTCTTA 5'& ||.|. |||||.| &5' -------CTGAGT-TGCAGGA- 3' Ubfd1 mmu-miR-544 beg:70 end:87 pic:3' CTCGAACGATTTTTACGTCTTA 5'& ||..| ||||||.| &5' -------CTGGAT-TGCAGAGT 3' Ubfd1 mmu-miR-654-3p beg:2899 end:2915 pic:3' TTCCACTACCAGT-CGTCTGTAT 5'& || |.||||||| &5' ----------TCCTGTAGACATA 3' Ubfd1 mmu-miR-654-5p beg:3178 end:3196 pic:3' TGTGTACAAG-ACGTCGAATGGT 5'& || ||| |||.|.| &5' --------TCTTGCTTCTTGCTA 3' Ubfd1 mmu-miR-665 beg:1744 end:1763 pic:3' TCCCTGGA-GTCGGAGGACCA 5'& |.||| ||| .|||||| &5' ---GGCCTGCAG-TTCCTGG- 3' Ubfd1 mmu-miR-665 beg:1223 end:1246 pic:3' TCCCTGGAGT--CG-GAGGACCA 5'& ||||| || |||||||| &5' --GGACCAGCTTGCTCTCCTGGT 3' Ubfd1 mmu-miR-667 beg:2083 end:2097 pic:3' GAACCCGACCCACCGTCCACAGT 5'& ||| ||||||| &5' ------------GGCCGGTGTCA 3' Ubfd1 mmu-miR-668 beg:1701 end:1724 pic:3' CCATCACCCGGCTCGGC-TCACTGT 5'& || |..| || |||||.| &5' -----TGTGTTGCACCTCAGTGATA 3' Ubfd1 mmu-miR-669g beg:1890 end:1909 pic:3' TAGTACAGTTGTGTATGTTACGT 5'& | |||| |||.||| &5' --CCTGTCTTG----ACAGTGC- 3' Ubfd1 mmu-miR-669g beg:2300 end:2317 pic:3' TAGTACAGTTGTGTATGTTACGT 5'& || ||| |||.||| &5' --------AAGACAGACAGTGC- 3' Ubfd1 mmu-miR-669i beg:602 end:616 pic:3' CATACGTACACACATATACGT 5'& |||||.|.||| &5' ---------TGTGTGTGTGC- 3' Ubfd1 mmu-miR-669j beg:602 end:616 pic:3' ACAAACGTACACTCATATACGT 5'& || ||.|.||| &5' ----------TGTGTGTGTGC- 3' Ubfd1 mmu-miR-669n beg:98 end:116 pic:3' TGTGTGTAGGTGTGTGTTTA 5'& |||| ||||||||||| &5' ---CACA--CACACACAAAT 3' Ubfd1 mmu-miR-672 beg:1774 end:1795 pic:3' AGTGTGTGTCATGTGGTTGGAGT 5'& .| | |. |||.|||| &5' ----GCTCCTTGTCCCAGCCTC- 3' Ubfd1 mmu-miR-672 beg:97 end:119 pic:3' AGTGTGTGTCATGTGGTTGGAGT 5'& |||||||| |||| ||.||| &5' TCACACAC---ACACAAATCTC- 3' Ubfd1 mmu-miR-673-3p beg:2310 end:2330 pic:3' CCACGTGTCTTGAGTCGGGGCCT 5'& |||| |||| |||||.||. &5' -GTGC-CAGA----AGCCCTGGG 3' Ubfd1 mmu-miR-673-3p beg:56 end:78 pic:3' CCACGTGTCTTGAGTCGGGGCCT 5'& ||| |.||| || |||.||| &5' GGTCCGCAG----CATCCCTGGA 3' Ubfd1 mmu-miR-673-3p beg:1744 end:1764 pic:3' CCACGTGTCTTGA-GTC-GGGGCCT 5'& | || ||| .||.||| &5' --------GGCCTGCAGTTCCTGGA 3' Ubfd1 mmu-miR-673-5p beg:760 end:781 pic:3' GAGGTTCCTGGTC--TCGACACTC 5'& .||| |||||||. &5' -----GGGAAGTAACAGCTGTGG- 3' Ubfd1 mmu-miR-674 beg:1699 end:1721 pic:3' ATGTGGTG--AGGGTAGAGTCACG 5'& .|| |. || ||||||| &5' ---GCCTGTGTTGCACCTCAGTG- 3' Ubfd1 mmu-miR-674 beg:1609 end:1620 pic:3' ATGTGGTGAGGGTAGAGTCACG 5'& .||||||| &5' --------------TTCAGTGC 3' Ubfd1 mmu-miR-678 beg:319 end:341 pic:3' GGA-GGTCAGGAACGTGGCTCTG 5'& ||| |||| | ..|.||||| &5' CCTACCAG-CAA--TGCTGAGAC 3' Ubfd1 mmu-miR-678 beg:3361 end:3387 pic:3' GGAGGTC-AGGAACGT--GGCTCTG 5'& |||. |||||| |.|||| &5' -CTCTGCTTCCTTGGTGTCTGAGA- 3' Ubfd1 mmu-miR-680 beg:1128 end:1147 pic:3' GGGGGTAC-AGTCGTCTACGGG 5'& |||| |||| ||||||. &5' --CCCAGGTTCAG-AGATGCT- 3' Ubfd1 mmu-miR-681 beg:2914 end:2937 pic:3' TCGACGGACGG-TCGCTCCGAC 5'& || ||||||| .| |||. &5' AGGGGCCTGCCTGGTAAGGT-- 3' Ubfd1 mmu-miR-682 beg:64 end:84 pic:3' GTCTGAAGTGACACTGACGTC 5'& ||| | || ||| ||.||||| &5' CAG-CATCCCTG-GATTGCAG 3' Ubfd1 mmu-miR-686 beg:752 end:771 pic:3' AGAAGTGGCAG-ACCCTTCGTTA 5'& |. | |||||||.|| &5' -----ATGGACATGGGAAGTAA- 3' Ubfd1 mmu-miR-691 beg:1624 end:1643 pic:3' AAAAGACGGAGAGAA--GTCCTTA 5'& ||| ||| |||||| &5' -----TGCA--TCTGGACAGGAA- 3' Ubfd1 mmu-miR-693-3p beg:2619 end:2641 pic:3' AATGTCGGTGTAGACTTTCGACG 5'& .|||||| ||.||||. &5' ---TAGCCACTGAA-AAGGCTGT 3' Ubfd1 mmu-miR-694 beg:693 end:715 pic:3' GAAGTCCGTT--GTAAAAGTC 5'& |||. ||.| |||||||| &5' CTTTTGGTACCTCATTTTCA- 3' Ubfd1 mmu-miR-698 beg:3119 end:3142 pic:3' TCCCTTCCTTTGCTC-TTAC 5'& |||||.|||| || .||| &5' AGGGAGGGAATAGATAGATG 3' Ubfd1 mmu-miR-702 beg:3343 end:3362 pic:3' CTCGCCCCATTTCCCACCCGT 5'& ||| | ||||||||. &5' -AGCTGCC---AGGGTGGGT- 3' Ubfd1 mmu-miR-705 beg:2038 end:2061 pic:3' ACGG--GTGGGGTGGAGGGTGG 5'& ||| .|.||| ||| | || &5' -GCCATTATCCC-CCTGCTGCC 3' Ubfd1 mmu-miR-708 beg:2243 end:2264 pic:3' GGGTCGATCTAACATTCGAGGAA 5'& ||| || .|||||| &5' ----GCTTGAGCTCTGGCTCCT- 3' Ubfd1 mmu-miR-708 beg:2591 end:2607 pic:3' GGGTCGATCTAACATTCGAGGAA 5'& |||| |.|||||| &5' --CAGCA-------AGGCTCCT- 3' Ubfd1 mmu-miR-708 beg:2536 end:2555 pic:3' GGGTCGATCTAACATTCGAGGAA 5'& || .|| |.|||.|| &5' ----GCAGGAGA--AGGCTTCT- 3' Ubfd1 mmu-miR-708star beg:349 end:366 pic:3' GATCTTCGAGTGTCAGATCAAC 5'& |||||. |||.|||| &5' ----AAGCTT----TCTGGTTG 3' Ubfd1 mmu-miR-708star beg:508 end:527 pic:3' GATCTTCGAGTGTCAGATCAAC 5'& |. |||||.|||| &5' ------GTGATGAGTCTGGTTG 3' Ubfd1 mmu-miR-709 beg:3358 end:3374 pic:3' AGGAGGACGGAGACGGAGG 5'& || ||||||.||| &5' ------TGGCTCTGCTTCC 3' Ubfd1 mmu-miR-709 beg:3386 end:3405 pic:3' AGGAGGAC-GGAGACGGAGG 5'& |.|||| |||.| ||| &5' -CTTCCTTACCTTT-CCT-- 3' Ubfd1 mmu-miR-711 beg:2748 end:2771 pic:3' GAATGTAGAGAGGGGCCCAGGG 5'& |.| || ||.||||||| &5' --TGCTGCTGAGCCTGGGTCCC 3' Ubfd1 mmu-miR-711 beg:1985 end:2004 pic:3' GAATGTAGAGAGGGGCCCAGGG 5'& |.||| . .||||||| &5' ------TTTCTGTGTGGGTCCC 3' Ubfd1 mmu-miR-712 beg:3112 end:3131 pic:3' CCATGGCGGGC---CCACTTCCTC 5'& ||| || ||.||| &5' ------GCCAAGAAGG-GAGGGA- 3' Ubfd1 mmu-miR-713 beg:1599 end:1620 pic:3' CGACA-CACGGAAGTCACGT 5'& .||| |||. |||||||| &5' -TTGTGGTGTATTCAGTGC- 3' Ubfd1 mmu-miR-717 beg:2332 end:2354 pic:3' TCTCTTCCATAG----AGACAGACTC 5'& ||.|. ||||||||.| &5' -------GTGTTTAGATCTGTCTGGG 3' Ubfd1 mmu-miR-717 beg:302 end:315 pic:3' TCTCTTCCATAGAGACAGACTC 5'& |||||.|||| &5' ------------TCTGTTTGAG 3' Ubfd1 mmu-miR-720 beg:2660 end:2680 pic:3' ACCTCCGGGGTCGC-TCTA 5'& || |||||. .| ||. &5' -GGTGGCCCTTCTGTAGG- 3' Ubfd1 mmu-miR-741 beg:678 end:696 pic:3' AGATGTATCTTACCGTAGAGAGT 5'& ||| .|.|||| &5' -------AGATGCCAGTTTCTC- 3' Ubfd1 mmu-miR-741 beg:819 end:840 pic:3' AGATGT-ATCTTACCGTAGAGAGT 5'& ||| |||| |.|||||||| &5' ---ACAGTAGA---GTATCTCTCA 3' Ubfd1 mmu-miR-742star beg:574 end:592 pic:3' ACTAATCGTTGGTACACTCAT 5'& |.| .. ||||||| &5' ----TGGGGGTG--GTGAGTA 3' Ubfd1 mmu-miR-743a beg:1354 end:1373 pic:3' AGATGAGTCGAACCACAGAAAG 5'& ||| ||| ||||||| &5' ----CTCTGCTGC-TGTCTTT- 3' Ubfd1 mmu-miR-743a beg:3362 end:3383 pic:3' AGATGAGTCGAACCACAGAAAG 5'& |||.||. |||||||||| &5' TCTGCTTC-CTTGGTGTCT--- 3' Ubfd1 mmu-miR-743a beg:3460 end:3484 pic:3' AGATGAGTC--GAACC-ACAGAAAG 5'& |||| |||| |||.||| &5' ---ACTCTGTTCTTGTTTGTTTTT- 3' Ubfd1 mmu-miR-743b-3p beg:1355 end:1373 pic:3' AGATAAGTCGTACTACAGAAAG 5'& || || || ||||||| &5' -----TCTGC-TGCTGTCTTT- 3' Ubfd1 mmu-miR-743b-3p beg:474 end:487 pic:3' AGATAAGTCGTACTACAGAAAG 5'& |||||||||| &5' -----------TGATGTCTTT- 3' Ubfd1 mmu-miR-743b-5p beg:750 end:774 pic:3' AC-TACCTGTGGTCAGACTTGT 5'& | |||||||. .| |||| &5' -GAATGGACATGGGAAGTAACA 3' Ubfd1 mmu-miR-759 beg:1634 end:1655 pic:3' CAGTTTTAACAAACGTGAGACG 5'& ||..| .||||||| &5' --CAGGAAAAAC--TACTCTGC 3' Ubfd1 mmu-miR-759 beg:3449 end:3470 pic:3' CAGTTTTAACAA-AC--GTGAGACG 5'& |||| || |||||||. &5' -------TTGTGGTGTACACTCTGT 3' Ubfd1 mmu-miR-760 beg:2017 end:2039 pic:3' AGGGGTGTC-TGGGTCTCGGC 5'& |||.| ||| ||.|| ||| &5' TCCTCCCAGTACTCAT-GCC- 3' Ubfd1 mmu-miR-760 beg:2764 end:2784 pic:3' AGGGGTGTCTGGGTCTCGGC 5'& .||| ||| |.||||||. &5' -TCCCTCAG-CTCAGAGCT- 3' Ubfd1 mmu-miR-760 beg:1946 end:1971 pic:3' AGGGGTGT--CTGGGTCT-CGGC 5'& |.||||| |.|.| || ||| &5' TTCCCACCTTGGCTCTGAGGCC- 3' Ubfd1 mmu-miR-760 beg:2680 end:2702 pic:3' AGG-GGTGTCTG-GGTCTCGGC 5'& || .|||||.| .|| ||| &5' -CCATCACAGGCATCAT-GCC- 3' Ubfd1 mmu-miR-761 beg:1346 end:1366 pic:3' ACACAGTCAAAGTGGGACGACG 5'& || | ||||| .||||||| &5' --TG-CTGTTTC--TCTGCTGC 3' Ubfd1 mmu-miR-762 beg:1561 end:1581 pic:3' CGAGACAGGGCCG-GGGTCGGGG 5'& ||.. || .||||||| &5' -----GTTTGGGAATCCAGCCC- 3' Ubfd1 mmu-miR-762 beg:1770 end:1795 pic:3' CGAGAC-AGGGCCGGGGTCGGGG 5'& ||.|| |||. |.|||||||.| &5' -CTTTGCTCCTTGTCCCAGCCTC 3' Ubfd1 mmu-miR-763 beg:3332 end:3351 pic:3' CGGTGACCAAGAAGGGTCGACC 5'& .||||| |..||||| &5' ---GCTGGTGG--CTTAGCTG- 3' Ubfd1 mmu-miR-764-5p beg:3061 end:3081 pic:3' TCCTCCT-GT-ACACTCGTGG 5'& |||||| || ||||||| &5' -GGAGGAGCATTGTGAGC--- 3' Ubfd1 mmu-miR-7a beg:724 end:738 pic:3' TGTTGTTTTAGTGATCAGAAGGT 5'& .|| ||||||| &5' -----------GCTC-TCTTCCA 3' Ubfd1 mmu-miR-7b beg:721 end:738 pic:3' TGTTGTTTTAGTGTTC---AGAAGGT 5'& ||.| ||||||| &5' ------------CAGGCTCTCTTCCA 3' Ubfd1 mmu-miR-804 beg:2577 end:2596 pic:3' AGGTCCACTC-CTTGTTGAGTGT 5'& ||| | | ||||||| &5' -------GAGAGTCCTACTCACA 3' Ubfd1 mmu-miR-871 beg:839 end:865 pic:3' GTACT---GAC-CGTGATTAGACTTAT 5'& ||| ||| |.|| |.||.|| &5' --TGATTCCTGTGTACCC-TTTGGAT- 3' Ubfd1 mmu-miR-871 beg:1059 end:1075 pic:3' GTACTGACCGTGATTAGACTTAT 5'& |||. .|.||||| &5' ------TGGTT---GTTTGAAT- 3' Ubfd1 mmu-miR-872 beg:2873 end:2895 pic:3' GGACTTGATTGTTCATTGGAA 5'& |||..|||| .| ||.|| &5' -CTGGGCTAAGGATT-ACTTT 3' Ubfd1 mmu-miR-876-3p beg:2617 end:2631 pic:3' ACTTAATGAAACATTTGGTGAT 5'& ||| |.|||||. &5' ----------TGT-AGCCACTG 3' Ubfd1 mmu-miR-876-5p beg:2716 end:2740 pic:3' ATCACT-AAGTGTCTCTTTAGGT 5'& .|||| || .|||| |||| . &5' -GGTGACTTGGCAGAAAAATGT- 3' Ubfd1 mmu-miR-877 beg:2593 end:2611 pic:3' GGGACGCGGTA-GAGGAGATG 5'& || |||||||.| &5' ------GCAAGGCTCCTCTGC 3' Ubfd1 mmu-miR-877 beg:1778 end:1798 pic:3' GGGACGCGGTA-GAGGAGATG 5'& ||.||. ||| |||||| &5' CCTTGTCCCAGCCTCCTC--- 3' Ubfd1 mmu-miR-877 beg:2034 end:2057 pic:3' GGGACGC-GGTAGAGGAGATG 5'& |||||| ..||| || ||.| &5' CCCTGCCATTATCCCC-CTGC 3' Ubfd1 mmu-miR-877 beg:715 end:733 pic:3' GGGACGCGGTA-GAG-GAGATG 5'& |.|| .|||| ||| ||. &5' CTCTTTGCCAGGCTCTCTT--- 3' Ubfd1 mmu-miR-877star beg:2523 end:2538 pic:3' ACCCTCCTCCCTCTTCTCCTGT 5'& || .|||||.|| &5' ----------GATGAGAGGGCA 3' Ubfd1 mmu-miR-879 beg:3294 end:3322 pic:3' CCGAATC-TCGATA---TTCGGAGA 5'& ||| ||| ||. .||||||| &5' GGCCTAGAAGTAGACAGGAGCCTCT 3' Ubfd1 mmu-miR-879 beg:1285 end:1299 pic:3' CCGAATCTCGATATTCGGAGA 5'& ||.|||||||. &5' ---------CTGTAAGCCTT- 3' Ubfd1 mmu-miR-881 beg:2901 end:2917 pic:3' AGATAAGTCTTTTCTGTGTCAA 5'& ||.| |||||.||| &5' -CTGT-------AGACATAGT- 3' Ubfd1 mmu-miR-881star beg:1338 end:1362 pic:3' TCTACACTGACA----ATAGAGAGAC 5'& |||| |||| |.|.|||||| &5' ---TGTG-CTGTTTGCTGTTTCTCTG 3' Ubfd1 mmu-miR-882 beg:718 end:735 pic:3' TGATTACGCGATTGAGAGAGGA 5'& ||| | .||||||.| &5' -----TGC-CAGGCTCTCTTC- 3' Ubfd1 mmu-miR-883a-3p beg:1740 end:1758 pic:3' TATGACTCTCGACAACGTCAAT 5'& ||.|| || ||||||| &5' -TATTG---GCC--TGCAGTT- 3' Ubfd1 mmu-miR-883a-3p beg:3070 end:3092 pic:3' TATGACTCTCGACAACGTCAAT 5'& |.|| ||||| ||||||||. &5' --ATTGTGAGCTATTGCAGTTG 3' Ubfd1 mmu-miR-883a-5p beg:2924 end:2945 pic:3' CATTGACGATGA-AGAGAGTCGT 5'& ||| || || |||||.| &5' ----CTGGTAAGGTC-CTCAGTA 3' Ubfd1 mmu-miR-883b-3p beg:3070 end:3092 pic:3' TATGACTCTCTACAACGTCAAT 5'& |.|| ||| ||||||||. &5' --ATTGTGAGCTATTGCAGTTG 3' Ubfd1 mmu-miR-9 beg:2968 end:2983 pic:3' AGTATGTCGATCTATTGGTTTCT 5'& || .||||||| &5' -----------GAGGGCCAAAGA 3' Ubfd1 mmu-miR-9 beg:2091 end:2114 pic:3' AGTATGTCGATCTATTGGTTTCT 5'& |||| | ||| .||||||| &5' TCATTT--CAAGAGGACCAAAG- 3' Ubfd1 mmu-miR-93 beg:930 end:952 pic:3' GATGGAC-GTGCTTGTCGTGAAAC 5'& ||.||| ||| ||||| || &5' CTGCCTATCACC-ACAGC-CT--- 3' Ubfd1 mmu-miR-669h-3p beg:1613 end:1632 pic:3' ACACGTACACACATATACGTAT 5'& |||| || ||||||| &5' -GTGCCAA---GT-TATGCAT- 3' Ubfd1 mmu-miR-669k beg:1613 end:1632 pic:3' AACGTACGCACATATACGTAT 5'& .||| ||||||| &5' ----GTGCCAAGTTATGCAT- 3' Ubfd1 mmu-miR-470 beg:1684 end:1698 pic:3' TGAGTGGTCACGGTCAGGTTCTT 5'& || ||||||||| &5' ----------GC--GTCCAAGAA 3' Ubfd1 mmu-miR-1894-3p beg:3201 end:3217 pic:3' GAGGGAAGTGGGAGAGGGAACG 5'& .||. .||||||| &5' --------GCCTGTTCCCTTG- 3' Ubfd1 mmu-miR-712 beg:27 end:46 pic:3' CCATGGC-GGGCC-CACTTCCTC 5'& |.| ||| |||||||| &5' ----CTGACCCAAAGTGAAGGA- 3' Ubfd1 mmu-miR-455 beg:488 end:508 pic:3' CACATATACGG--GC--ACCTGACG 5'& ||| | |||||||| &5' -------TGCAAACATTTGGACTGC 3' Ubfd1 mmu-miR-220 beg:124 end:143 pic:3' TTCACAGACTGTG--ACACCACC 5'& ||||| . ||||||| &5' -----TCTGAGGTGATGTGGTG- 3' Ubfd1 mmu-miR-220 beg:1591 end:1610 pic:3' TTCACAGACTGT--GACACCACC 5'& ||| .| .||||||| &5' -----TCTTGCTTTTTGTGGTG- 3' Ubfd1 mcmv-miR-m01-2 beg:3169 end:3185 pic:3' TGGCAAGGTTGGGCTAAGAGAAG 5'& |||||. ||||||| &5' ------CCAACT---TTCTCTT- 3'

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Ubfd1 RAID00005620 mmu-miR-497a-5p miRNA MIMAT0003453 Ubfd1 mRNA 28018 CLIP-seq//Prediction 0.6478 Ubfd1 RAID00100657 mmu-miR-7033-5p miRNA MIMAT0027970 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID00103632 mmu-miR-1929-5p miRNA MIMAT0009392 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID00106031 mmu-miR-1306-5p miRNA MIMAT0019136 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID00125239 mmu-miR-223-3p miRNA MIMAT0000665 Ubfd1 mRNA 28018 NGS (Next Generation Sequencing)//Prediction 0.6308 Ubfd1 RAID00130936 mmu-miR-295-3p miRNA MIMAT0000373 Ubfd1 mRNA 28018 CLIP-seq//Prediction 0.6478 Ubfd1 RAID00131748 mmu-miR-875-5p miRNA MIMAT0004937 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID00142922 mmu-miR-653-5p miRNA MIMAT0004943 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID00143746 mmu-miR-6976-5p miRNA MIMAT0027854 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID00152212 mmu-miR-150-5p miRNA MIMAT0000160 Ubfd1 mRNA 28018 Prediction 0.2202 Ubfd1 RAID00167281 mmu-miR-3154 miRNA MIMAT0035714 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID00167467 mmu-miR-503-5p miRNA MIMAT0003188 Ubfd1 mRNA 28018 Prediction 0.2202 Ubfd1 RAID00195152 mmu-miR-6353 miRNA MIMAT0025096 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID00220046 mmu-miR-222-3p miRNA MIMAT0000670 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID00250538 mmu-miR-342-3p miRNA MIMAT0000590 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID00263329 mmu-miR-330-3p miRNA MIMAT0000569 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID00269375 mmu-miR-302a-3p miRNA MIMAT0000380 Ubfd1 mRNA 28018 CLIP-seq//Prediction 0.6308 Ubfd1 RAID00280371 mmu-miR-107-3p miRNA MIMAT0000647 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID00282215 mmu-miR-7681-3p miRNA MIMAT0029883 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID00296632 mmu-let-7i-5p miRNA MIMAT0000122 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID00301149 mmu-miR-292a-3p miRNA MIMAT0000370 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID00311708 mmu-miR-6999-5p miRNA MIMAT0027900 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID00326473 mmu-miR-488-3p miRNA MIMAT0003450 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID00350819 mmu-miR-499-5p miRNA MIMAT0003482 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID00361219 mmu-miR-30c-5p miRNA MIMAT0000514 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID00417109 mmu-miR-292a-5p miRNA MIMAT0000369 Ubfd1 mRNA 28018 CLIP-seq//Prediction 0.6308 Ubfd1 RAID00425043 mmu-miR-221-5p miRNA MIMAT0017060 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID00445393 mmu-miR-181b-5p miRNA MIMAT0000673 Ubfd1 mRNA 28018 CLIP-seq//Prediction 0.6308 Ubfd1 RAID00453996 mmu-miR-7048-3p miRNA MIMAT0028001 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID00487917 mmu-miR-133b-3p miRNA MIMAT0000769 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID00505979 mmu-miR-494-3p miRNA MIMAT0003182 Ubfd1 mRNA 28018 CLIP-seq//Prediction 0.6478 Ubfd1 RAID00511192 mmu-miR-328-3p miRNA MIMAT0000565 Ubfd1 mRNA 28018 Prediction 0.2202 Ubfd1 RAID00518224 mmu-miR-200b-3p miRNA MIMAT0000233 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID00621764 mmu-miR-682 miRNA MIMAT0003459 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID00625601 mmu-miR-6997-5p miRNA MIMAT0027896 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID00638790 mmu-miR-3090-5p miRNA MIMAT0014901 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID00684721 mmu-miR-205-5p miRNA MIMAT0000238 Ubfd1 mRNA 28018 CLIP-seq//Prediction 0.6308 Ubfd1 RAID00686565 mmu-miR-3085-3p miRNA MIMAT0014879 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID00689353 mmu-miR-1197-3p miRNA MIMAT0005858 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID00700435 mmu-miR-302d-3p miRNA MIMAT0003377 Ubfd1 mRNA 28018 CLIP-seq//Prediction 0.6308 Ubfd1 RAID00769084 mmu-miR-5134-5p miRNA MIMAT0020645 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID00785079 mmu-miR-290a-5p miRNA MIMAT0000366 Ubfd1 mRNA 28018 CLIP-seq//Prediction 0.6308 Ubfd1 RAID00831915 mmu-miR-882 miRNA MIMAT0004847 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID00853223 mmu-miR-1927 miRNA MIMAT0009390 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID00865080 mmu-miR-6419 miRNA MIMAT0025175 Ubfd1 mRNA 28018 Prediction 0.2202 Ubfd1 RAID00906500 mmu-miR-590-3p miRNA MIMAT0004896 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID00948362 mmu-miR-23a-3p miRNA MIMAT0000532 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID00963251 mmu-miR-206-3p miRNA MIMAT0000239 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID01007648 mmu-miR-186-5p miRNA MIMAT0000215 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID01064881 mmu-miR-6967-5p miRNA MIMAT0027836 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID01100969 mmu-miR-7010-5p miRNA MIMAT0027924 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID01128704 mmu-miR-3961 miRNA MIMAT0019338 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID01140537 mmu-miR-370-3p miRNA MIMAT0001095 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID01147824 mmu-miR-301b-3p miRNA MIMAT0004186 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID01157582 mmu-miR-30b-5p miRNA MIMAT0000130 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID01171338 mmu-miR-149-3p miRNA MIMAT0016990 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID01200830 mmu-let-7e-5p miRNA MIMAT0000524 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID01240884 mmu-miR-6715-5p miRNA MIMAT0029876 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID01283311 mmu-miR-7024-3p miRNA MIMAT0027953 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID01293099 mmu-miR-195b miRNA MIMAT0025076 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID01300228 mmu-miR-93-5p miRNA MIMAT0000540 Ubfd1 mRNA 28018 CLIP-seq//Prediction 0.6478 Ubfd1 RAID01303383 mmu-miR-320-3p miRNA MIMAT0000666 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID01308443 mmu-miR-6413 miRNA MIMAT0025166 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID01323983 mmu-miR-7665-5p miRNA MIMAT0029836 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID01332894 mmu-miR-211-5p miRNA MIMAT0000668 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID01357564 mmu-miR-7054-5p miRNA MIMAT0028012 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID01378764 mmu-miR-490-3p miRNA MIMAT0003780 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID01388845 mmu-miR-1258-3p miRNA MIMAT0029905 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID01396490 mmu-miR-455-3p miRNA MIMAT0003742 Ubfd1 mRNA 28018 Prediction 0.2202 Ubfd1 RAID01398123 mmu-miR-7016-5p miRNA MIMAT0027936 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID01411331 mmu-miR-708-5p miRNA MIMAT0004828 Ubfd1 mRNA 28018 Prediction 0.2202 Ubfd1 RAID01483829 mmu-miR-7090-5p miRNA MIMAT0028086 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID01518156 mmu-miR-106b-5p miRNA MIMAT0000386 Ubfd1 mRNA 28018 CLIP-seq//Prediction 0.6478 Ubfd1 RAID01543442 mmu-miR-1961 miRNA MIMAT0009434 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID01573671 mmu-miR-5627-3p miRNA MIMAT0022386 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID01576965 mmu-miR-3083-5p miRNA MIMAT0014874 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID01608985 mmu-miR-322-5p miRNA MIMAT0000548 Ubfd1 mRNA 28018 CLIP-seq//Prediction 0.6478 Ubfd1 RAID01613266 mmu-miR-18b-5p miRNA MIMAT0004858 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID01621789 mmu-miR-7684-3p miRNA MIMAT0029891 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID01644595 mmu-miR-20b-5p miRNA MIMAT0003187 Ubfd1 mRNA 28018 CLIP-seq//Prediction 0.6478 Ubfd1 RAID01652485 mmu-miR-377-3p miRNA MIMAT0000741 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID01655489 mmu-miR-301a-3p miRNA MIMAT0000379 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID01674917 mmu-miR-148b-3p miRNA MIMAT0000580 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID01690286 mmu-let-7b-5p miRNA MIMAT0000522 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID01693209 mmu-miR-29a-3p miRNA MIMAT0000535 Ubfd1 mRNA 28018 Prediction 0.2202 Ubfd1 RAID01694016 mmu-miR-5622-5p miRNA MIMAT0022371 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID01756018 mmu-miR-147-5p miRNA MIMAT0017269 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID01787578 mmu-miR-384-5p miRNA MIMAT0004745 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID01796426 mmu-miR-1906 miRNA MIMAT0007872 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID01816806 mmu-miR-16-5p miRNA MIMAT0000527 Ubfd1 mRNA 28018 CLIP-seq//Prediction 0.6478 Ubfd1 RAID01833403 mmu-miR-1958 miRNA MIMAT0009431 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID01837529 mmu-miR-20a-5p miRNA MIMAT0000529 Ubfd1 mRNA 28018 CLIP-seq//Prediction 0.6478 Ubfd1 RAID01899084 mmu-let-7a-2-3p miRNA MIMAT0017015 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID01912661 mmu-miR-149-5p miRNA MIMAT0000159 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID01933813 mmu-miR-17-5p miRNA MIMAT0000649 Ubfd1 mRNA 28018 CLIP-seq//Prediction 0.6478 Ubfd1 RAID01950015 mmu-miR-141-3p miRNA MIMAT0000153 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID01989606 mmu-miR-98-5p miRNA MIMAT0000545 Ubfd1 mRNA 28018 Prediction 0.2202 Ubfd1 RAID01999115 mmu-miR-338-3p miRNA MIMAT0000582 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID02037343 mmu-miR-7002-5p miRNA MIMAT0027906 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID02039070 mmu-miR-182-5p miRNA MIMAT0000211 Ubfd1 mRNA 28018 CLIP-seq//Prediction 0.6308 Ubfd1 RAID02045131 mmu-miR-1907 miRNA MIMAT0007876 Ubfd1 mRNA 28018 CLIP-seq//Prediction 0.6308 Ubfd1 RAID02073751 mmu-miR-7119-3p miRNA MIMAT0028136 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID02078133 mmu-miR-30a-5p miRNA MIMAT0000128 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID02103201 mmu-miR-135b-5p miRNA MIMAT0000612 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID02122303 mmu-miR-6335 miRNA MIMAT0025077 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID02145728 mmu-miR-758-3p miRNA MIMAT0003889 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID02151163 mmu-miR-6414 miRNA MIMAT0025168 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID02156520 mmu-miR-30d-5p miRNA MIMAT0000515 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID02170991 mmu-miR-452-3p miRNA MIMAT0017194 Ubfd1 mRNA 28018 Prediction 0.2202 Ubfd1 RAID02194315 mmu-miR-152-3p miRNA MIMAT0000162 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID02196605 mmu-miR-136-5p miRNA MIMAT0000148 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID02227558 mmu-miR-1954 miRNA MIMAT0009425 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID02280844 mmu-miR-200c-3p miRNA MIMAT0000657 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID02291009 mmu-miR-449a-5p miRNA MIMAT0001542 Ubfd1 mRNA 28018 CLIP-seq 0.5483 Ubfd1 RAID02300968 mmu-miR-6395 miRNA MIMAT0025146 Ubfd1 mRNA 28018 Prediction 0.2202 Ubfd1 RAID02318508 mmu-miR-3094-3p miRNA MIMAT0014910 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID02322912 mmu-miR-8097 miRNA MIMAT0031399 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID02369783 mmu-miR-126b-5p miRNA MIMAT0029894 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID02395665 mmu-miR-1943-5p miRNA MIMAT0009408 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID02396550 mmu-miR-471-3p miRNA MIMAT0017195 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID02477383 mmu-miR-294-3p miRNA MIMAT0000372 Ubfd1 mRNA 28018 CLIP-seq//Prediction 0.6478 Ubfd1 RAID02491993 mmu-miR-9-5p miRNA MIMAT0000142 Ubfd1 mRNA 28018 CLIP-seq//Prediction 0.6478 Ubfd1 RAID02511830 mmu-miR-7022-5p miRNA MIMAT0027948 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID02526780 mmu-miR-15b-5p miRNA MIMAT0000124 Ubfd1 mRNA 28018 Prediction 0.2202 Ubfd1 RAID02550693 mmu-miR-224-3p miRNA MIMAT0017062 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID02569079 mmu-miR-27a-3p miRNA MIMAT0000537 Ubfd1 mRNA 28018 CLIP-seq 0.5483 Ubfd1 RAID02575236 mmu-miR-146a-5p miRNA MIMAT0000158 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID02578714 mmu-miR-5127 miRNA MIMAT0020638 Ubfd1 mRNA 28018 CLIP-seq//Prediction 0.6478 Ubfd1 RAID02587540 mmu-let-7g-5p miRNA MIMAT0000121 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID02590195 mmu-miR-291b-3p miRNA MIMAT0003190 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID02618140 mmu-miR-350-5p miRNA MIMAT0017040 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID02651089 mmu-miR-27b-3p miRNA MIMAT0000126 Ubfd1 mRNA 28018 CLIP-seq//Prediction 0.6308 Ubfd1 RAID02757927 mmu-miR-18a-5p miRNA MIMAT0000528 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID02761354 mmu-miR-290a-3p miRNA MIMAT0004572 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID02799459 mmu-miR-496a-3p miRNA MIMAT0003738 Ubfd1 mRNA 28018 Prediction 0.2202 Ubfd1 RAID02862487 mmu-miR-296-3p miRNA MIMAT0004576 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID02883435 mmu-miR-7001-3p miRNA MIMAT0027905 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID02910682 mmu-miR-29b-3p miRNA MIMAT0000127 Ubfd1 mRNA 28018 Prediction 0.2202 Ubfd1 RAID02918513 mmu-miR-339-5p miRNA MIMAT0000584 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID02925613 mmu-miR-1192 miRNA MIMAT0005850 Ubfd1 mRNA 28018 CLIP-seq//Prediction 0.6478 Ubfd1 RAID02941215 mmu-miR-30e-5p miRNA MIMAT0000248 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID02952766 mmu-miR-142a-3p miRNA MIMAT0000155 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID02955418 mmu-miR-204-5p miRNA MIMAT0000237 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID02958586 mmu-miR-340-5p miRNA MIMAT0004651 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID02979645 mmu-let-7f-5p miRNA MIMAT0000525 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID02997306 mmu-miR-200b-5p miRNA MIMAT0004545 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID03002133 mmu-miR-6919-3p miRNA MIMAT0027739 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID03067129 mmu-miR-489-3p miRNA MIMAT0003112 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID03088317 mmu-miR-7013-5p miRNA MIMAT0027930 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID03090752 mmu-miR-293-5p miRNA MIMAT0004573 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID03128477 mmu-miR-96-5p miRNA MIMAT0000541 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID03131582 mmu-miR-448-3p miRNA MIMAT0001533 Ubfd1 mRNA 28018 Prediction 0.2202 Ubfd1 RAID03149757 mmu-miR-154-5p miRNA MIMAT0000164 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID03154243 mmu-miR-485-5p miRNA MIMAT0003128 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID03158598 mmu-miR-7094-3p miRNA MIMAT0028095 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID03162608 mmu-miR-28a-5p miRNA MIMAT0000653 Ubfd1 mRNA 28018 Prediction 0.2202 Ubfd1 RAID03167089 mmu-miR-672-3p miRNA MIMAT0017241 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID03175974 mmu-miR-6948-3p miRNA MIMAT0027797 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID03179953 mmu-miR-144-3p miRNA MIMAT0000156 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID03181594 mmu-miR-7683-3p miRNA MIMAT0029887 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID03231290 mmu-miR-7117-3p miRNA MIMAT0028132 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID03238941 mmu-miR-7080-3p miRNA MIMAT0028067 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID03248974 mmu-miR-6934-3p miRNA MIMAT0027769 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID03283174 mmu-miR-200a-5p miRNA MIMAT0004619 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID03297211 mmu-miR-185-5p miRNA MIMAT0000214 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID03368263 mmu-miR-7027-5p miRNA MIMAT0027958 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID03376955 mmu-miR-299b-3p miRNA MIMAT0022837 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID03418633 mmu-miR-429-3p miRNA MIMAT0001537 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID03422447 mmu-miR-135a-5p miRNA MIMAT0000147 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID03444152 mmu-miR-148a-3p miRNA MIMAT0000516 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID03447876 mmu-let-7c-5p miRNA MIMAT0000523 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID03508560 mmu-miR-29c-3p miRNA MIMAT0000536 Ubfd1 mRNA 28018 Prediction 0.2381 Ubfd1 RAID03510103 mmu-miR-224-5p miRNA MIMAT0000671 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID03538490 mmu-miR-15a-5p miRNA MIMAT0000526 Ubfd1 mRNA 28018 CLIP-seq//Prediction 0.6478 Ubfd1 RAID03563093 mmu-miR-3079-3p miRNA MIMAT0014867 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID03576567 mmu-miR-302b-3p miRNA MIMAT0003374 Ubfd1 mRNA 28018 CLIP-seq//Prediction 0.6308 Ubfd1 RAID03603835 mmu-miR-6969-5p miRNA MIMAT0027840 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID03630393 mmu-miR-421-3p miRNA MIMAT0004869 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID03647829 mmu-miR-505-3p miRNA MIMAT0003513 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID03650190 mmu-miR-181d-5p miRNA MIMAT0004324 Ubfd1 mRNA 28018 CLIP-seq//Prediction 0.6308 Ubfd1 RAID03661360 mmu-miR-129-5p miRNA MIMAT0000209 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID03697181 mmu-miR-200a-3p miRNA MIMAT0000519 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID03705132 mmu-miR-335-5p miRNA MIMAT0000766 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID03720816 mmu-miR-495-3p miRNA MIMAT0003456 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID03745651 mmu-miR-7226-5p miRNA MIMAT0028420 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID03777955 mmu-miR-6342 miRNA MIMAT0025085 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID03799984 mmu-miR-203-3p miRNA MIMAT0000236 Ubfd1 mRNA 28018 Prediction 0.2202 Ubfd1 RAID03801476 mmu-miR-7646-5p miRNA MIMAT0029794 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID03802271 mmu-miR-106a-5p miRNA MIMAT0000385 Ubfd1 mRNA 28018 CLIP-seq//Prediction 0.6478 Ubfd1 RAID03803856 mmu-miR-195a-5p miRNA MIMAT0000225 Ubfd1 mRNA 28018 Prediction 0.2202 Ubfd1 RAID03820939 mmu-miR-183-5p miRNA MIMAT0000212 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID03822654 mmu-miR-452-5p miRNA MIMAT0001637 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID03857110 mmu-miR-23b-3p miRNA MIMAT0000125 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID03917130 mmu-miR-6970-5p miRNA MIMAT0027842 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID03922198 mmu-miR-7064-5p miRNA MIMAT0028032 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID03932985 mmu-miR-34a-5p miRNA MIMAT0000542 Ubfd1 mRNA 28018 CLIP-seq 0.5483 Ubfd1 RAID03935482 mmu-miR-7018-5p miRNA MIMAT0027940 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID03942936 mmu-miR-7026-5p miRNA MIMAT0027956 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID03958096 mmu-miR-7661-5p miRNA MIMAT0029828 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID03983826 mmu-let-7a-5p miRNA MIMAT0000521 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID03988029 mmu-miR-153-3p miRNA MIMAT0000163 Ubfd1 mRNA 28018 Prediction 0.2202 Ubfd1 RAID04000784 mmu-miR-124-3p miRNA MIMAT0000134 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID04010936 mmu-miR-133a-3p miRNA MIMAT0000145 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID04025477 mmu-miR-19a-3p miRNA MIMAT0000651 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID04045473 mmu-miR-6946-5p miRNA MIMAT0027792 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID04065322 mmu-miR-291a-3p miRNA MIMAT0000368 Ubfd1 mRNA 28018 CLIP-seq//Prediction 0.6478 Ubfd1 RAID04065588 mmu-miR-7077-3p miRNA MIMAT0028061 Ubfd1 mRNA 28018 Prediction 0.1828 Ubfd1 RAID04894010 G730013B05Rik lncRNA 619312 Ubfd1 protein 28018 Microarray//RNA-seq 0.6606