Asb9
DNA & RNA Element - microRNA
Mirbase AccmiRNA NameGene IDGene SymbolmiRNA AlignmentAlignmentGene AlignmentmiRNA StartmiRNA EndGene StartGene EndGenome CoordinatesConservationAlign ScoreSeed CatEnergymirSVR Score
MIMAT0000129mmu-miR-30a*69299Asb9cgaCGUUUGUAGGCUGACUUUc ||||:|| ||||||| uucGCAAGCA----ACUGAAAa2201734[mm9:X:160977613-160977630:+]0.55501507-14.17-0.6017
MIMAT0000249mmu-miR-30e*69299Asb9cgacauuUGUAGGCUGACUUUc :|| | ||||||| uggauucGCAAGCAACUGAAAa2161334[mm9:X:160977609-160977630:+]0.55501477-9.63-0.6302
MIMAT0003493mmu-miR-70369299Asb9aagaaaggaagACUUCCAAAa ||||||||| uuucaaauaaaUGAAGGUUUa2116282[mm9:X:160977658-160977678:+]0.55501507-12.38-1.2959
MIMAT0004890mmu-miR-509-5p69299Asb9uacUAACGGUGUAAGACCUCAu | | ::|| ||||||| gaaACUCUUAC-CACUGGAGUu2204363[mm9:X:160977639-160977659:+]0.55501417-14.65-0.7277
MIMAT0005291mmu-miR-582-5p69299Asb9ucaUUGACC-AA-C--UUGUUGACau :||||| || | |:|||||| aggGACUGGAUUCGCAAGCAACUGaa320732[mm9:X:160977603-160977628:+]0.55501360-16.86-0.1043
MIMAT0009430mmu-miR-195769299Asb9caguauacGAG-AUGGUGAc ||| ||||||| uguugaaaCUCUUACCACUg2123958[mm9:X:160977635-160977654:+]0.55501467-18.73-0.2980
MIMAT0012774mmu-miR-66469299Asb9auccgaccccUCAUUUACUUau | |||||||| uggaguuucaAAUAAAUGAAgg3135778[mm9:X:160977653-160977674:+]0.55501320-9.63-0.2238
MIMAT0000153mmu-miR-14169299Asb9gguagaaauggUCUGUCACAAu | |||||||| aagcaacugaaAAACAGUGUUg2122243[mm9:X:160977618-160977639:+]0.55501477-13.88-0.6013
MIMAT0000238mmu-miR-20569299Asb9gucugaggccaccUUACUUCCu |||||||| ggaguuucaaauaAAUGAAGGu2105879[mm9:X:160977654-160977675:+]0.55501457-13.86-0.8522
MIMAT0000519mmu-miR-200a69299Asb9uguagcaauggUCUGUCACAAu | |||||||| aagcaacugaaAAACAGUGUUg2122243[mm9:X:160977618-160977639:+]0.55501477-11.98-0.6013
DNA & RNA Element - TRANSFAC
AccessionASDescriptionSpeciesEntrezPubmedBinding Info
G055845Asb9Mus musculus69299
DNA & RNA Element - RepTar
Gene NamemiRNABeginEndProfile
Asb9mmu-miR-703beg:70end:82pic:3' AAGAAAGGAAGACTTCCAAAA 5'& ||||||||| &5' -----------TGAAGGTTT- 3'
Asb9mmu-miR-30astarbeg:17end:34pic:3' CGACGTTTGTAGGCTGACTTTC 5'& ||||.|| ||||||| &5' ---GCAAGCA----ACTGAAA- 3'
Asb9mmu-miR-205beg:60end:79pic:3' GTCTGAGGCCACCTTACTTCCT 5'& .|| |||||||| &5' ----TTCAAATA-AATGAAGG- 3'
Asb9mmu-miR-200abeg:32end:43pic:3' TGTAGCAATGGTCTGTCACAAT 5'& ||||||||. &5' -------------ACAGTGTTG 3'
Asb9mghv-miR-M1-6beg:49end:67pic:3' TTTTGGTGGAGTGTGTCAAAGT 5'& |||||. . ||||||| &5' ---ACCACT----GGAGTTTCA 3'
Asb9mmu-miR-141beg:22end:44pic:3' GGTAGAAATGGTCTGTCACAAT 5'& || || ||||||||. &5' -CAACTGAAAA--ACAGTGTTG 3'
Asb9mmu-miR-1930beg:0end:10pic:3' TGCGACGTCCATGATACCTCCA 5'& .|.|||||| &5' ------------TTGTGGAGG- 3'
Asb9mmu-miR-1957beg:44end:59pic:3' CAGTATACGAG-ATGGTGAC 5'& ||| |||||||| &5' --------CTCTTACCACTG 3'
Asb9mmu-miR-429beg:21end:44pic:3' TGCCGTAATGGTC---TGTCATAAT 5'& ||| ||.. |||||.||. &5' ---GCA--ACTGAAAAACAGTGTTG 3'
DNA & RNA Element - RAID2
Gene NameRAID IDInteractor 1Category 1ID 1Interactor 2Category 2ID 2MethodsScore
Asb9RAID03324010mmu-miR-200a-3pmiRNAMIMAT0000519Asb9mRNA69299Prediction0.1828
Asb9RAID03386059mmu-miR-141-3pmiRNAMIMAT0000153Asb9mRNA69299Prediction0.1828
Asb9RAID03609347mmu-miR-205-5pmiRNAMIMAT0000238Asb9mRNA69299Prediction0.1828