DNA & RNA Element - AREsite Gene Name Motif CDS Area ARE Area Evidence Sh3rf1 ATTTA 271-2946 3260-3264;3335-3339 Sh3rf1 WWATTTAWW 271-2946 3258-3266

DNA & RNA Element - miRTarBase Target Gene (Entrez ID) miRTarBase ID miRNA Species (miRNA) Target Gene Species (Target Gene) Experiments Support Type References (PMID) MIRT013508 mmu-miR-30e-5p Mus musculus Sh3rf1 59009 Mus musculus Sequencing Functional MTI (Weak) 19536157 MIRT581059 mmu-miR-421-3p Mus musculus Sh3rf1 59009 Mus musculus HITS-CLIP Functional MTI (Weak) 25083871

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004522 mmu-miR-27b* 59009 Sh3rf1 caAGUG-GUUAGUCGAUUC-GAGa | || :|| || :|||| ||| uaUAACAUAAACAUUUAAGCCUCa 2 21 759 782 [mm9:8:63864489-63864512:+] 0.5387 123 0 -10.98 -1.0122 MIMAT0004529 mmu-miR-125b* 59009 Sh3rf1 uccagGGUUCU-UGGACUGAACa ||| | :||||||||| gugcaCCACCAUGCCUGACUUGu 2 18 992 1014 [mm9:8:63864722-63864744:+] 0.5022 156 7 -22.87 -0.1336 MIMAT0000137 mmu-miR-126-5p 59009 Sh3rf1 gcgcauGGUUUUCAUUAUUAc |: ||| ||||||| acaacuCUUAAA-UAAUAAUa 2 16 1202 1221 [mm9:8:63864932-63864951:+] 0.5010 149 7 -3.75 -1.1009 MIMAT0000152 mmu-miR-140* 59009 Sh3rf1 ggCACCAAGAUGGGACAC-CAu ||||| | |:||||| || aaGUGGUAGU-CUCUGUGUGUg 2 20 805 825 [mm9:8:63873439-63873459:+] 0.6050 125 0 -21.61 -0.2343 MIMAT0004539 mmu-miR-183* 59009 Sh3rf1 aauaccgggaagccAUUAAGUg ||||||| ccuuaguuaacacuUAAUUCAu 2 9 176 197 [mm9:8:63863906-63863927:+] 0.4845 140 7 -7.36 -0.3071 MIMAT0000230 mmu-miR-199a-3p 59009 Sh3rf1 auugguuacacgucUGAUGACa ||||||| ccaccaccaccaccACUACUGa 2 9 1135 1156 [mm9:8:63873769-63873790:+] 0.5500 140 7 -13.10 -0.1392 MIMAT0004545 mmu-miR-200b* 59009 Sh3rf1 agguuacgacgggucAUUCUAc |||||| augucuuuuuuuuuuUAAGAUg 2 8 254 275 [mm9:8:63872888-63872909:+] 0.6168 120 6 -9.48 -0.1404 MIMAT0004546 mmu-miR-202-5p 59009 Sh3rf1 uuucuUCAUAUAC-GUAUCCUu :||| ||| ||||||| ugauuGGUAAAUGACAUAGGAg 2 17 109 130 [mm9:8:63863839-63863860:+] 0.5111 159 7 -16.39 -0.1924 MIMAT0000240 mmu-miR-207 59009 Sh3rf1 cucccUCCUCUCGG-UCCUCUUCg | || :|:: |||||||| augaaAUGAUGGUUAAGGAGAAGc 2 19 393 416 [mm9:8:63873027-63873050:+] 0.7327 153 7 -18.67 -0.7284 MIMAT0004572 mmu-miR-290-3p 59009 Sh3rf1 cccgaauuUUGAUCCGCCGUGAAa :|:| |:||||||| agccgccuGAUUUUGUGGCACUUu 2 17 1296 1319 [mm9:8:63865026-63865049:+] 0.5179 152 7 -19.44 -0.7896 MIMAT0000367 mmu-miR-291a-5p 59009 Sh3rf1 ucucucccggAGGUGAAACUAc ||::||||||| uccccaucugUCUGCUUUGAUc 2 13 622 643 [mm9:8:63873256-63873277:+] 0.5995 152 7 -11.21 -0.1979 MIMAT0000367 mmu-miR-291a-5p 59009 Sh3rf1 ucucucccggAGGU--GAAACUAc |||| ||||||| ucuuuuuauaUCCAUCCUUUGAUg 2 13 1372 1395 [mm9:8:63874006-63874029:+] 0.6053 147 7 -15.40 -0.1625 MIMAT0000370 mmu-miR-292-3p 59009 Sh3rf1 uguGAGUUUUGGACCGCCGUGAAa | | :|::| |:||||||| agcCGCCUGAUUUUGUGGCACUUu 2 22 1296 1319 [mm9:8:63865026-63865049:+] 0.5179 157 7 -20.75 -0.7933 MIMAT0004574 mmu-miR-294* 59009 Sh3rf1 ucuaucccggaggUAAAACUCa |||||||| gccuuuuaugguaAUUUUGAGg 2 10 2170 2191 [mm9:8:63874804-63874825:+] 0.6755 145 7 -12.07 -0.7263 MIMAT0000375 mmu-miR-297a 59009 Sh3rf1 uguaCGUGUACGUGUGUAUGUa | | :| :| ||||||| aacaGGAGGUUUA-ACAUACAc 2 19 1083 1103 [mm9:8:63873717-63873737:+] 0.5898 144 7 -10.01 -0.1726 MIMAT0000376 mmu-miR-298 59009 Sh3rf1 ccCUUCUUGUCGGGAGGAGACGg ||| | | |||: ||||||| caGAA-AUCUGCCUGCCUCUGCc 2 22 1411 1432 [mm9:8:63865141-63865162:+] 0.5011 163 7 -27.52 -0.1099 MIMAT0000378 mmu-miR-300 59009 Sh3rf1 cuucucucgaaCGG--GAACGUAu ||| ||||||| gugauuucuccGCCAUCUUGCAUg 2 12 980 1003 [mm9:8:63873614-63873637:+] 0.6296 142 7 -14.23 -0.2573 MIMAT0004579 mmu-miR-302a* 59009 Sh3rf1 cguucauguuggugcAAAUUCa |||||| aaaugucuuuuuuuuUUUAAGa 2 8 252 273 [mm9:8:63872886-63872907:+] 0.6168 120 6 -2.58 -0.1821 MIMAT0004579 mmu-miR-302a* 59009 Sh3rf1 cguucauguuggugcAAAUUCa |||||| uuguuuuuuuuuaacUUUAAGa 2 8 1554 1575 [mm9:8:63874188-63874209:+] 0.4933 120 6 -4.21 -0.1254 MIMAT0004583 mmu-miR-130b* 59009 Sh3rf1 ucaUCACGUUGUCCCUUUCUCa ||| : |:| ||||||| agcAGUUUCAUA--GAAAGAGc 2 20 57 76 [mm9:8:63872691-63872710:+] 0.6131 148 7 -13.16 -0.4076 MIMAT0004619 mmu-miR-200a* 59009 Sh3rf1 aggucgugacaggccAUUCUAc |||||| augucuuuuuuuuuuUAAGAUg 2 8 254 275 [mm9:8:63872888-63872909:+] 0.6168 120 6 -12.98 -0.1390 MIMAT0004620 mmu-let-7a* 59009 Sh3rf1 ccuuucugucaucuaACAUAUc |||||| uuuuuuuuuuuaagaUGUAUAa 2 8 259 280 [mm9:8:63872893-63872914:+] 0.6168 120 6 -6.04 -0.1063 MIMAT0004620 mmu-let-7a* 59009 Sh3rf1 ccuuucugucaucuaACAUAUc |||||| uauauauaaaaacacUGUAUAu 2 8 1703 1724 [mm9:8:63874337-63874358:+] 0.6687 120 6 -2.99 -0.1726 MIMAT0004621 mmu-let-7b* 59009 Sh3rf1 cccuuccgucauccaACAUAUc |||||| uuuuuuuuuuuaagaUGUAUAa 2 8 259 280 [mm9:8:63872893-63872914:+] 0.6168 120 6 -3.41 -0.1063 MIMAT0004621 mmu-let-7b* 59009 Sh3rf1 cccuuccgucauccaACAUAUc |||||| uauauauaaaaacacUGUAUAu 2 8 1703 1724 [mm9:8:63874337-63874358:+] 0.6687 120 6 -2.99 -0.1759 MIMAT0004622 mmu-let-7c-1* 59009 Sh3rf1 ccuuUCGAUCUUCCAACA-UGUc || | |:| ||||| ||| caguAGAU-GGAUGUUGUAACAa 2 19 2102 2123 [mm9:8:63874736-63874757:+] 0.6645 120 0 -9.36 -0.3279 MIMAT0005439 mmu-let-7c-2* 59009 Sh3rf1 ccuuucugucaucuaACAUAUc |||||| uuuuuuuuuuuaagaUGUAUAa 2 8 259 280 [mm9:8:63872893-63872914:+] 0.6168 120 6 -6.04 -0.1063 MIMAT0005439 mmu-let-7c-2* 59009 Sh3rf1 ccuuucugucaucuaACAUAUc |||||| uauauauaaaaacacUGUAUAu 2 8 1703 1724 [mm9:8:63874337-63874358:+] 0.6687 120 6 -2.99 -0.1726 MIMAT0004623 mmu-let-7f* 59009 Sh3rf1 cccuuccgUUAUCUAACAUAUc || | | |||||| uauauauaAAAACACUGUAUAu 2 15 1703 1724 [mm9:8:63874337-63874358:+] 0.6687 122 6 -3.70 -0.1726 MIMAT0004623 mmu-let-7f* 59009 Sh3rf1 cccuuccguuaucuaACAUAUc |||||| uuuuuuuuuuuaagaUGUAUAa 2 8 259 280 [mm9:8:63872893-63872914:+] 0.6168 120 6 -6.04 -0.1052 MIMAT0004636 mmu-miR-93* 59009 Sh3rf1 gccCUUCACGAUCGAGUCGUCa |:|| |||: |||||||| gcuGGAGAGCUGACUCAGCAGu 2 20 1051 1072 [mm9:8:63864781-63864802:+] 0.5010 171 7 -26.29 -0.1900 MIMAT0004636 mmu-miR-93* 59009 Sh3rf1 gcCCUUCAC-GAUCGAGUC-GUCa || || | | | ||||| ||| caGGCAGCGUCCACCUCAGCCAGc 2 21 947 970 [mm9:8:63864677-63864700:+] 0.5006 123 0 -14.57 -0.1422 MIMAT0000544 mmu-miR-129-3p 59009 Sh3rf1 uacgaAAAACCCCAUUCCCGAa | ||| ||||||| auggaUGUUGUAACAAGGGCUu 2 18 2108 2129 [mm9:8:63874742-63874763:+] 0.6700 145 7 -14.01 -0.1594 MIMAT0000549 mmu-miR-322* 59009 Sh3rf1 cacaacgucgcgAAGUACAaa ||||||| uuuacuuggauaUUCAUGUaa 3 10 1764 1784 [mm9:8:63874398-63874418:+] 0.6687 125 0 -7.66 -0.2375 MIMAT0000551 mmu-miR-323-3p 59009 Sh3rf1 ucUCCAGCUGGCACAUUACAc | || :|| |||||||| uaAAGUGUGCCUUGUAAUGUc 2 20 214 234 [mm9:8:63872848-63872868:+] 0.6168 159 7 -12.96 -0.5167 MIMAT0000551 mmu-miR-323-3p 59009 Sh3rf1 ucuccagcuggcaCAUUACAc ||||||| cuuaaagagauacGUAAUGUg 2 9 1640 1660 [mm9:8:63874274-63874294:+] 0.6323 140 7 -13.30 -0.2239 MIMAT0000558 mmu-miR-325* 59009 Sh3rf1 ugugaaugacucgugGAUGAUcc |||||| aaaaaagcaaaaagaCUACUAca 3 9 1914 1936 [mm9:8:63874548-63874570:+] 0.6687 120 0 -9.05 -0.1544 MIMAT0000569 mmu-miR-330* 59009 Sh3rf1 agAGACGUCCGGGACACGAAACg || || |: | ||||||| ggUCCCCA-UCUGUCUGCUUUGa 2 22 620 641 [mm9:8:63873254-63873275:+] 0.5995 147 7 -13.91 -0.3756 MIMAT0000569 mmu-miR-330* 59009 Sh3rf1 agagacguccgggACACGAAAcg | |||||| cuuaacuaauuuaUUUGCUUUuu 3 11 306 328 [mm9:8:63872940-63872962:+] 0.7270 122 0 -5.01 -0.2084 MIMAT0000578 mmu-miR-337-3p 59009 Sh3rf1 uccguaguauAUC-CUCGACUu |:| ||||||| ugguuuaggcUGGAGAGCUGAc 2 12 1043 1064 [mm9:8:63864773-63864794:+] 0.5024 142 7 -15.72 -0.2121 MIMAT0004647 mmu-miR-338-5p 59009 Sh3rf1 guGAGUCGUGGUCCUAUAA-CAa ||: : :::||||||| || uuCUUUAUUUUGGGAUAUUAGUg 2 21 1874 1896 [mm9:8:63874508-63874530:+] 0.6687 120 0 -11.02 -0.9648 MIMAT0004647 mmu-miR-338-5p 59009 Sh3rf1 guGAGUCGUGGUCCUAUA-ACAa | :||| || ||||| ||| uuCAUAGCCACAUGAUAUCUGUc 2 21 193 215 [mm9:8:63863923-63863945:+] 0.4834 128 0 -11.64 -0.3630 MIMAT0004649 mmu-miR-339-3p 59009 Sh3rf1 gcCGAGACAGCGGCUCCGCGAGu || || :|:| ||||||| caGC-CUAGUGUC-UGGCGCUCu 2 22 967 987 [mm9:8:63864697-63864717:+] 0.5006 145 7 -23.26 -0.1577 MIMAT0000593 mmu-miR-344 59009 Sh3rf1 ugucAGUCCGA---AACCGAUCU-AGu ||| ||| |||||||| || guccUCAUGCUGCCCUGGCUAGACUCa 2 20 908 934 [mm9:8:63864638-63864664:+] 0.5006 126 0 -20.24 -0.1086 MIMAT0004656 mmu-miR-345-3p 59009 Sh3rf1 cagaggUCUGGGGAUCAAGUCc ||: ||| ||||||| uugcagAGGACCCAAGUUCAGu 2 17 1091 1112 [mm9:8:63864821-63864842:+] 0.5010 160 7 -21.65 -0.1297 MIMAT0000605 mmu-miR-350 59009 Sh3rf1 cuuucaCAUACCCGAAACACUu ||| | ||||||| gacacaGUAAAAG-UUUGUGAg 2 17 880 900 [mm9:8:63873514-63873534:+] 0.6594 142 7 -9.27 -0.2131 MIMAT0004659 mmu-miR-10a* 59009 Sh3rf1 auAAGGGGAUCUAUGCUUAAAc ||||::|: :| :|||||| ugUUCCUUUGUGU-UGAAUUUu 2 21 1727 1747 [mm9:8:63874361-63874381:+] 0.6687 146 6 -14.97 -0.1430 MIMAT0004666 mmu-miR-33* 59009 Sh3rf1 cacUA-CGUGACACCUUUGUAAc || | ||||| ||||||| caaAUGGAACUGUAUAAACAUUu 2 20 1266 1288 [mm9:8:63864996-63865018:+] 0.5179 162 7 -13.79 -0.4653 MIMAT0004666 mmu-miR-33* 59009 Sh3rf1 cacuacgugacaccUUUGUAAc ||||||| uuuuccuauaacauAAACAUUu 2 9 753 774 [mm9:8:63864483-63864504:+] 0.5387 140 7 -3.96 -0.8558 MIMAT0000672 mmu-miR-199b* 59009 Sh3rf1 cuUGUCCAUCAGAUUUGUGACcc |:| || | |||||||| auAUAUAUA-UAAAAACACUGua 3 22 1700 1721 [mm9:8:63874334-63874355:+] 0.6687 135 0 -9.21 -0.3968 MIMAT0004667 mmu-miR-199b 59009 Sh3rf1 auugguuacacgucUGAUGACa ||||||| ccaccaccaccaccACUACUGa 2 9 1135 1156 [mm9:8:63873769-63873790:+] 0.5500 140 7 -13.10 -0.1392 MIMAT0004670 mmu-miR-7a* 59009 Sh3rf1 auaccgucugacacuAAACAAc |||||| uuguuuuuuuuuuuuUUUGUUu 2 8 1538 1559 [mm9:8:63874172-63874193:+] 0.4933 120 6 -1.52 -0.1038 MIMAT0000745 mmu-miR-380-3p 59009 Sh3rf1 uucuacacCUGGUAUGAUGUau ||| ||||||| agcaaaaaGAC--UACUACAag 3 15 1919 1938 [mm9:8:63874553-63874572:+] 0.6687 127 0 -9.04 -0.1070 MIMAT0004691 mmu-miR-382* 59009 Sh3rf1 uuUUUCACAACAGGCACUUACu | || | || ||||||| agACAGCCUGGU-AGUGAAUGa 2 21 1455 1475 [mm9:8:63874089-63874109:+] 0.5507 146 7 -12.56 -0.5143 MIMAT0003388 mmu-miR-376b* 59009 Sh3rf1 auugguaucuuccuUAUAGGUg ||||||| gagcccaucuuuuuAUAUCCAu 2 9 1365 1386 [mm9:8:63873999-63874020:+] 0.6053 140 7 -12.68 -0.5830 MIMAT0001422 mmu-miR-434-3p 59009 Sh3rf1 uccUCAGCUCACUACC-AAGUUu || | || | ||| ||||| uguAGACCAG-GCUGGCUUCAAa 2 20 1387 1408 [mm9:8:63865117-63865138:+] 0.5011 121 0 -9.76 -0.2392 MIMAT0002105 mmu-miR-464 59009 Sh3rf1 auAGAGUGUC-UUAU---UUGAACCau |:|:| || |||| |||||| uuUUUUAAAGAAAUACUUUACUUGGau 3 22 1748 1774 [mm9:8:63874382-63874408:+] 0.6687 135 0 -10.77 -0.1178 MIMAT0002106 mmu-miR-465a-5p 59009 Sh3rf1 agUGUAGUCACGGU----AAG-AUUUAu ||||:: ||::| ||| ||||| auACAUUGUUGUUACUACUUCAUAAAUg 2 22 305 332 [mm9:8:63864035-63864062:+] 0.5014 124 0 -12.80 -0.4975 MIMAT0004759 mmu-miR-466a-5p 59009 Sh3rf1 auacAUGUACAUGUGUGUGUAu |||| || ||||||||| uccaUACA-GU-CACACACAUg 2 19 1175 1194 [mm9:8:63864905-63864924:+] 0.5010 162 7 -20.45 -0.2618 MIMAT0004759 mmu-miR-466a-5p 59009 Sh3rf1 auaCAUGUACAUGUGUGUGUAu || ||||| :||||||| ugcGUUCAUGU--GCACACAUc 2 20 1157 1176 [mm9:8:63864887-63864906:+] 0.5010 160 7 -20.57 -0.1032 MIMAT0002107 mmu-miR-466a-3p 59009 Sh3rf1 agaauacacacgcacaUACAUAu |||||| ucuuuuuuuuuuuaagAUGUAUa 2 8 257 279 [mm9:8:63872891-63872913:+] 0.6168 120 6 -7.83 -0.1997 MIMAT0003409 mmu-miR-467a 59009 Sh3rf1 gcguauauguACGUCCGUGAAu ||: ||||||| cgccugauuuUGU-GGCACUUu 2 13 1299 1319 [mm9:8:63865029-63865049:+] 0.5179 142 7 -16.21 -0.7650 MIMAT0002108 mmu-miR-467a-1* 59009 Sh3rf1 cacauccacacacaUACAUAUa ||||||| uuuuuuuuuuuaagAUGUAUAa 2 9 259 280 [mm9:8:63872893-63872914:+] 0.6168 140 7 -5.14 -1.0514 MIMAT0002108 mmu-miR-467a-1* 59009 Sh3rf1 cacauccacacacauACAUAUa |||||| uauauauaaaaacacUGUAUAu 2 8 1703 1724 [mm9:8:63874337-63874358:+] 0.6687 120 6 -4.44 -0.1759 MIMAT0004786 mmu-miR-540-5p 59009 Sh3rf1 ugucucagucucccacUGGGAAc |||||| uaaaaauugauguucaACCCUU- 2 8 2214 2235 [mm9:8:63874848-63874869:+] 0.6184 120 6 -9.23 -0.1028 MIMAT0004786 mmu-miR-540-5p 59009 Sh3rf1 ugucucAGUCUC-CCACUGGGAAc |:|| | | ||||||| gccuucUUAGUGCUGAGACCCUUu 2 18 247 270 [mm9:8:63863977-63864000:+] 0.5023 148 7 -12.77 -0.3504 MIMAT0005295 mmu-miR-376c* 59009 Sh3rf1 auuuguaucuuccuUAUAGGUg ||||||| gagcccaucuuuuuAUAUCCAu 2 9 1365 1386 [mm9:8:63873999-63874020:+] 0.6053 140 7 -9.16 -0.5830 MIMAT0004789 mmu-miR-450a-3p 59009 Sh3rf1 uacuuacGUUUCGUAGGGGUUa || :|||||||| uaguuccCAUUCUAUCCCCAAg 2 16 841 862 [mm9:8:63873475-63873496:+] 0.6322 147 7 -14.85 -0.4372 MIMAT0004789 mmu-miR-450a-3p 59009 Sh3rf1 uacUUACGUUUCGUA-GGGGUUa |:|| |||| |||||| ccaAGUGAUCCGCAUGCCCCAAg 2 20 858 880 [mm9:8:63873492-63873514:+] 0.6594 123 6 -18.10 -0.4917 MIMAT0003189 mmu-miR-291b-5p 59009 Sh3rf1 ccucucccggAGGUGAAACUAg ||::||||||| uccccaucugUCUGCUUUGAUc 2 13 622 643 [mm9:8:63873256-63873277:+] 0.5995 152 7 -16.22 -0.1979 MIMAT0003189 mmu-miR-291b-5p 59009 Sh3rf1 ccucucccggAGGU--GAAACUAg |||| ||||||| ucuuuuuauaUCCAUCCUUUGAUg 2 13 1372 1395 [mm9:8:63874006-63874029:+] 0.6053 147 7 -11.32 -0.1625 MIMAT0003373 mmu-miR-302b* 59009 Sh3rf1 ucUUUCGUAAGGGUACAAUUUCa :| ||| |:|:|||||||| gaGAUGCA--CUCGUGUUAAAGu 2 22 914 934 [mm9:8:63873548-63873568:+] 0.6422 162 7 -21.62 -0.3332 MIMAT0003373 mmu-miR-302b* 59009 Sh3rf1 ucuuuCGUAAGGGUACA-AUUUCa | :|||: |||| ||||| ucucuGGGUUCUGAUGUGUAAAGu 2 19 196 219 [mm9:8:63872830-63872853:+] 0.5663 130 0 -14.50 -0.1580 MIMAT0003373 mmu-miR-302b* 59009 Sh3rf1 ucuuuCGUAAGGGUACAAUUUCa | |||::: | |||||| guguuGAAUUUUUUUUUUAAAGa 2 19 1736 1758 [mm9:8:63874370-63874392:+] 0.6687 130 6 -5.19 -0.3127 MIMAT0003375 mmu-miR-302c* 59009 Sh3rf1 cgUCCAUUGGGGUACAAUUUCg || |: |:|:|||||||| agAGAUGCACUCGUGUUAAAGu 2 21 913 934 [mm9:8:63873547-63873568:+] 0.6422 164 7 -18.13 -0.3387 MIMAT0003375 mmu-miR-302c* 59009 Sh3rf1 cgUCCAUUGGGGUACA-AUUUCg :||| :|: |||| ||||| cuGGGU--UCUGAUGUGUAAAGu 2 21 199 219 [mm9:8:63872833-63872853:+] 0.5663 121 0 -13.97 -0.1641 MIMAT0003375 mmu-miR-302c* 59009 Sh3rf1 cguccauugggguacAAUUUCg |||||| uguugaauuuuuuuuUUAAAGa 2 8 1737 1758 [mm9:8:63874371-63874392:+] 0.6687 120 6 -5.12 -0.3180 MIMAT0005460 mmu-miR-1224 59009 Sh3rf1 gagguggagggguCAGGAGUg ||||||| agcuggugacgguGUCCUCAu 2 9 895 915 [mm9:8:63864625-63864645:+] 0.5196 140 7 -14.32 -0.1090 MIMAT0003726 mmu-miR-675-3p 59009 Sh3rf1 ugacucgccaauccCGUAUGUc ||||||| acagucacacacauGCAUACAc 2 9 1180 1201 [mm9:8:63864910-63864931:+] 0.5010 140 7 -7.21 -0.6391 MIMAT0003728 mmu-miR-374* 59009 Sh3rf1 gagccugUUACUAUUA-UGUUGg ||| ||||| ||||| acucuuaAAUAAUAAUAACAACa 2 16 1205 1227 [mm9:8:63864935-63864957:+] 0.5010 131 0 -12.54 -1.0350 MIMAT0014815 mmu-miR-3099* 59009 Sh3rf1 guUCCCGACCUUCCUUCGACc | ||:| :: ||||||| ugAUGGUUAAGGAGAAGCUGg 2 20 399 419 [mm9:8:63873033-63873053:+] 0.7327 151 7 -20.57 -0.6758 MIMAT0003477 mmu-miR-669a 59009 Sh3rf1 uguacuUGUACG--UGUGUGUUGa |||||| ||||||||| ucacacACAUGCAUACACACAACu 2 17 1184 1207 [mm9:8:63864914-63864937:+] 0.5010 167 7 -23.44 -0.5366 MIMAT0003897 mmu-miR-759 59009 Sh3rf1 caguuuuaacaaacGUGAGACg ||||||| gcuguccuggaacuCACUCUGu 2 9 1368 1389 [mm9:8:63865098-63865119:+] 0.5011 140 7 -12.82 -0.2806 MIMAT0003452 mmu-miR-678 59009 Sh3rf1 ggaGGUCAGGAACGUGGCUCUg ||| | | || ||||||| ccaCCACUAC-UG-ACCGAGAu 2 20 1144 1163 [mm9:8:63873778-63873797:+] 0.5500 151 7 -20.28 -0.1229 MIMAT0003454 mmu-miR-423-3p 59009 Sh3rf1 ugacuccccGGAG-UC-UGGCUCGa |:|| || ||||||| cuuccagauCUUCAAGAACCGAGCa 2 15 88 112 [mm9:8:63872722-63872746:+] 0.5622 148 7 -20.19 -0.3448 MIMAT0003459 mmu-miR-682 59009 Sh3rf1 gucuGAAGUGACACUGACGUc :|| || ||||||| ucuuUUUGACAUAGACUGCAu 2 18 450 470 [mm9:8:63873084-63873104:+] 0.5602 149 7 -13.34 -0.2515 MIMAT0003462 mmu-miR-684 59009 Sh3rf1 aacugaacUUC-CCUUUUGa |:| ||||||| uaucugccAGGAGGAAAACu 2 12 665 684 [mm9:8:63864395-63864414:+] 0.5370 142 7 -13.01 -0.2677 MIMAT0003464 mmu-miR-686 59009 Sh3rf1 agaAGUGG-CAGAC-CCU-UCGUUa || || ||||| || ||||| uucUCUCCUGUCUGUUGAGAGCAAg 2 20 421 445 [mm9:8:63873055-63873079:+] 0.7327 125 0 -18.78 -0.4405 MIMAT0003464 mmu-miR-686 59009 Sh3rf1 agaaguggcagacccUUCGUUa |||||| auagaaauuuuaaaaAAGCAAa 2 8 1903 1924 [mm9:8:63874537-63874558:+] 0.6687 120 6 -7.10 -0.3306 MIMAT0003471 mmu-miR-692 59009 Sh3rf1 cucacuccgcGAGUUUCUCUa ||:||||||| aucccauuguCUUAAAGAGAu 2 12 1630 1650 [mm9:8:63874264-63874284:+] 0.6323 151 7 -14.33 -0.6209 MIMAT0003472 mmu-miR-693-5p 59009 Sh3rf1 cuUUUGAAAGC-CUACACCGAc |:| | || |||||||| aaAGAGAUACGUAAUGUGGCUa 2 20 1643 1664 [mm9:8:63874277-63874298:+] 0.6687 150 7 -14.54 -1.0822 MIMAT0004189 mmu-miR-693-3p 59009 Sh3rf1 aauGUCGGUGUAGACUUUCGACg :||::| | ||||||| cuuUAGUUAGA--AAAAAGCUGa 2 21 1809 1829 [mm9:8:63874443-63874463:+] 0.6687 141 7 -12.58 -1.0548 MIMAT0003474 mmu-miR-694 59009 Sh3rf1 gaaguccGUUGUAAAAGUc | |:||||||| cuuuucuCCAUAUUUUCAg 2 13 1965 1983 [mm9:8:63874599-63874617:+] 0.6687 148 7 -12.46 -0.7191 MIMAT0003474 mmu-miR-694 59009 Sh3rf1 gaAGUCCGUUG-UAAAAGUc ||| :|:| ||||||| uuUCA--UAGCAAUUUUCAc 2 18 1050 1067 [mm9:8:63873684-63873701:+] 0.6296 145 7 -9.49 -0.4099 MIMAT0003474 mmu-miR-694 59009 Sh3rf1 gaAGUCCGUUGUAAAAGUc ||| || ||||||||| gcUCA-GC-ACAUUUUCAa 2 18 1480 1496 [mm9:8:63865210-63865226:+] 0.4933 157 7 -13.55 -0.4271 MIMAT0003474 mmu-miR-694 59009 Sh3rf1 gaaguccguUGUAAAAGUc ||||||||| cuuuacuacACAUUUUCAu 2 11 1543 1561 [mm9:8:63865273-63865291:+] 0.5110 150 7 -10.11 -0.4996 MIMAT0003478 mmu-miR-467b* 59009 Sh3rf1 cacAACCACACACAUACAUAUa || | | | ||||||| uuuUUUUUUUAAG-AUGUAUAa 2 20 260 280 [mm9:8:63872894-63872914:+] 0.6168 141 7 -5.14 -1.0304 MIMAT0003478 mmu-miR-467b* 59009 Sh3rf1 cacaaccacacacauACAUAUa |||||| uauauauaaaaacacUGUAUAu 2 8 1703 1724 [mm9:8:63874337-63874358:+] 0.6687 120 6 -4.44 -0.1759 MIMAT0003480 mmu-miR-297b-5p 59009 Sh3rf1 uguacaaguacgugUGUAUGUa ||||||| uaacaggagguuuaACAUACAc 2 9 1082 1103 [mm9:8:63873716-63873737:+] 0.5898 140 7 -10.58 -0.1874 MIMAT0004827 mmu-miR-297b-3p 59009 Sh3rf1 auacccauacacacaUACAUAu |||||| cuuuuuuuuuuuaagAUGUAUa 2 8 258 279 [mm9:8:63872892-63872913:+] 0.6168 120 6 -5.94 -0.1978 MIMAT0004827 mmu-miR-297b-3p 59009 Sh3rf1 auACCCAUACACACAUACAUAu | | | | | | ||| ||| aaUUGAUUUUUUUUUAUAUAUa 2 21 1685 1706 [mm9:8:63874319-63874340:+] 0.6687 120 0 -0.06 -0.1183 MIMAT0004827 mmu-miR-297b-3p 59009 Sh3rf1 auacCCAUACACAC-AU-ACAUAu || || |||| || ||||| aaauGGAAU-UGUGCUACUGUAUg 2 19 328 350 [mm9:8:63864058-63864080:+] 0.5014 123 0 -14.35 -0.4295 MIMAT0003493 mmu-miR-703 59009 Sh3rf1 aagaaaggaAGACUUCCAAAa | | ||||||| cauguaauaUAUAAAGGUUUg 2 13 1778 1798 [mm9:8:63874412-63874432:+] 0.6687 144 7 -6.07 -0.9329 MIMAT0003493 mmu-miR-703 59009 Sh3rf1 aagaaaggaagAC-UUCCAAAa || ||||||| ugaggacuggaUGAAAGGUUUc 2 11 2187 2208 [mm9:8:63874821-63874842:+] 0.6761 141 7 -10.31 -0.8928 MIMAT0003496 mmu-miR-706 59009 Sh3rf1 aaaaaaCUCUGUCCCAA-AGAGa || :| ||||| |||| uaaggaGAAGCUGGGUUCUCUCc 2 17 406 428 [mm9:8:63873040-63873062:+] 0.7327 124 0 -19.01 -0.2755 MIMAT0003496 mmu-miR-706 59009 Sh3rf1 aaAAAACUCUGUCCCAAAGAGa ||| |||||||||||||| guUUUCAAGACAGGGUUUCUCu 2 21 1335 1356 [mm9:8:63865065-63865086:+] 0.5011 184 7 -29.45 -0.1177 MIMAT0003499 mmu-miR-709 59009 Sh3rf1 agGA-GGACGGAGACGGAGg || |||||||||||||| auCUGCCUGCCUCUGCCUCu 2 18 1416 1435 [mm9:8:63865146-63865165:+] 0.5011 176 7 -36.12 -0.1010 MIMAT0003500 mmu-miR-710 59009 Sh3rf1 gaGUUGAGAGGGGUUCUGAACc | ::|| ||:| ||||||| cgCUGUUC-CCUCUAGACUUGa 2 21 805 825 [mm9:8:63864535-63864555:+] 0.5387 158 7 -21.20 -0.8909 MIMAT0003504 mmu-miR-713 59009 Sh3rf1 cgacacACGGAAGU-CACGu ||| |||| |||| guuaccUGCGUUCAUGUGCa 2 14 1151 1170 [mm9:8:63864881-63864900:+] 0.5010 121 0 -15.26 -0.2446 MIMAT0003506 mmu-miR-715 59009 Sh3rf1 gugcgcccccacacGUGCCUc |||||| ----gaagacgggaCACGGAg 2 8 1 17 [mm9:8:63872635-63872651:+] 0.6174 120 6 -21.35 -0.1037 MIMAT0004838 mmu-miR-742* 59009 Sh3rf1 acuaaucGUUGGUACACUCAu || |::||||||| cagcuuuCAUCUGUGUGAGUc 2 15 1833 1853 [mm9:8:63874467-63874487:+] 0.6687 154 7 -14.45 -0.1874 MIMAT0004237 mmu-miR-742 59009 Sh3rf1 aaAUGGGU-CGUAC-CACCGAAAg | :|:: |::|| |||||||| agUCUCUGUGUGUGAGUGGCUUUg 2 21 812 835 [mm9:8:63873446-63873469:+] 0.6050 154 7 -17.76 -0.2028 MIMAT0004237 mmu-miR-742 59009 Sh3rf1 aaaugggUCG-UACCACCGAAAg ||| || ||||||| uucuuagAGCGAUUUUGGCUUUg 2 16 540 562 [mm9:8:63864270-63864292:+] 0.5517 150 7 -12.00 -0.3614 MIMAT0004237 mmu-miR-742 59009 Sh3rf1 aaaUGGGUCGUA-CC------ACCGAAAg || ||||:| || ||||||| agaACACAGCGUAGGUUCCCAUGGCUUUc 2 20 483 511 [mm9:8:63864213-63864241:+] 0.5250 145 7 -22.64 -0.1373 MIMAT0004238 mmu-miR-743a 59009 Sh3rf1 agaugaGUCGAACCACAGAAAg ||| | ||||||| acuuuaCAGAUAAAUGUCUUUu 2 17 241 262 [mm9:8:63872875-63872896:+] 0.6168 148 7 -13.35 -1.0684 MIMAT0004238 mmu-miR-743a 59009 Sh3rf1 agAUGAGUCGAA-CCACAGAAAg | ||: :|| ||||||| auUUCUUUUUUUACCUGUCUUUu 2 21 1947 1969 [mm9:8:63874581-63874603:+] 0.6687 143 7 -9.27 -0.5535 MIMAT0004840 mmu-miR-743b-3p 59009 Sh3rf1 agAUAAGUCGUA-CUACAGAAAg | | ||| || |||||||| acUUUACAG-AUAAAUGUCUUUu 2 21 241 262 [mm9:8:63872875-63872896:+] 0.6168 153 7 -14.99 -1.0709 MIMAT0004840 mmu-miR-743b-3p 59009 Sh3rf1 agauaagucguacuACAGAAAg ||||||| uuucuuuuuuuaccUGUCUUUu 2 9 1948 1969 [mm9:8:63874582-63874603:+] 0.6687 140 7 -7.57 -0.5535 MIMAT0004842 mmu-miR-879 59009 Sh3rf1 ccGAAUCUCGAUAUUCGGAGa | || | | |||||||| aaCAUAAACAUUUAAGCCUCa 2 20 762 782 [mm9:8:63864492-63864512:+] 0.5387 155 7 -11.44 -1.1542 MIMAT0004845 mmu-miR-881* 59009 Sh3rf1 ucuacacUGACAAU-AGAGAGAc ::|| | ||||||| cccuucaGUUGGCAUUCUCUCUg 2 16 866 888 [mm9:8:63864596-63864618:+] 0.5387 142 7 -16.22 -0.2287 MIMAT0004846 mmu-miR-881 59009 Sh3rf1 agauaagucuuUUCUGUGUCAa |||||||||| ccgcaugccccAAGACACAGUa 2 12 867 888 [mm9:8:63873501-63873522:+] 0.6594 155 7 -14.53 -0.5084 MIMAT0004848 mmu-miR-883a-5p 59009 Sh3rf1 cauugacGAUGAAGAGAGUCGu | |: :||||||| ucuaagcCAAUGGUUCUCAGCc 2 16 228 249 [mm9:8:63863958-63863979:+] 0.4933 143 7 -13.83 -0.2690 MIMAT0004850 mmu-miR-883b-5p 59009 Sh3rf1 acugAC-GAUGG-GUAAGAGUCAu || | |:: ::|||||||| uccgUGUCCAUUGUGUUCUCAGUa 2 19 1671 1694 [mm9:8:63865401-63865424:+] 0.5664 148 7 -17.82 -0.9535 MIMAT0004863 mmu-miR-220 59009 Sh3rf1 uuCACAGACUGUGACAC-CACc ||| : | | ||||| ||| aaGUGGUAGUCUCUGUGUGUGa 2 20 805 826 [mm9:8:63873439-63873460:+] 0.6050 123 0 -16.94 -0.2239 MIMAT0004864 mmu-miR-297a* 59009 Sh3rf1 auacccauacacacaUACAUAu |||||| cuuuuuuuuuuuaagAUGUAUa 2 8 258 279 [mm9:8:63872892-63872913:+] 0.6168 120 6 -5.94 -0.1978 MIMAT0004864 mmu-miR-297a* 59009 Sh3rf1 auACCCAUACACACAUACAUAu | | | | | | ||| ||| aaUUGAUUUUUUUUUAUAUAUa 2 21 1685 1706 [mm9:8:63874319-63874340:+] 0.6687 120 0 -0.06 -0.1183 MIMAT0004864 mmu-miR-297a* 59009 Sh3rf1 auacCCAUACACAC-AU-ACAUAu || || |||| || ||||| aaauGGAAU-UGUGCUACUGUAUg 2 19 328 350 [mm9:8:63864058-63864080:+] 0.5014 123 0 -14.35 -0.4295 MIMAT0004865 mmu-miR-297c 59009 Sh3rf1 uguaCAUGUACGUGUGUAUGUa | | :| :| ||||||| aacaGGAGGUUUA-ACAUACAc 2 19 1083 1103 [mm9:8:63873717-63873737:+] 0.5898 144 7 -10.11 -0.1726 MIMAT0004866 mmu-miR-297c* 59009 Sh3rf1 auacccauacacacaUACAUAu |||||| cuuuuuuuuuuuaagAUGUAUa 2 8 258 279 [mm9:8:63872892-63872913:+] 0.6168 120 6 -5.94 -0.1978 MIMAT0004866 mmu-miR-297c* 59009 Sh3rf1 auACCCAUACACACAUACAUAu | | | | | | ||| ||| aaUUGAUUUUUUUUUAUAUAUa 2 21 1685 1706 [mm9:8:63874319-63874340:+] 0.6687 120 0 -0.06 -0.1183 MIMAT0004866 mmu-miR-297c* 59009 Sh3rf1 auacCCAUACACAC-AU-ACAUAu || || |||| || ||||| aaauGGAAU-UGUGCUACUGUAUg 2 19 328 350 [mm9:8:63864058-63864080:+] 0.5014 123 0 -14.35 -0.4295 MIMAT0004871 mmu-miR-465b-5p 59009 Sh3rf1 gucUAGUCGUGGU-AAG-AUUUAu :|:: :||:| ||| ||||| auuGUUGUUACUACUUCAUAAAUg 2 20 309 332 [mm9:8:63864039-63864062:+] 0.5014 122 0 -8.90 -0.4975 MIMAT0004871 mmu-miR-465b-5p 59009 Sh3rf1 gucUA-GUCGUGGUAAG-AUUUAu || || ||| | || ||||| ugcAUACA-CACAACUCUUAAAUa 2 20 1193 1215 [mm9:8:63864923-63864945:+] 0.5010 120 0 -8.81 -1.0901 MIMAT0004875 mmu-miR-466b-5p 59009 Sh3rf1 guacAUGUACAUGUGUGUGUAg |||| || ||||||||| uccaUACA-GU-CACACACAUg 2 19 1175 1194 [mm9:8:63864905-63864924:+] 0.5010 162 7 -18.25 -0.2618 MIMAT0004875 mmu-miR-466b-5p 59009 Sh3rf1 guaCAUGUACAUGUGUGUGUAg || ||||| :||||||| ugcGUUCAUGU--GCACACAUc 2 20 1157 1176 [mm9:8:63864887-63864906:+] 0.5010 160 7 -21.69 -0.1032 MIMAT0004876 mmu-miR-466b-3p 59009 Sh3rf1 agaauacacacgcacaUACAUAu |||||| ucuuuuuuuuuuuaagAUGUAUa 2 8 257 279 [mm9:8:63872891-63872913:+] 0.6168 120 6 -7.83 -0.1997 MIMAT0005453 mmu-miR-466b-3-3p 59009 Sh3rf1 agaauacacacgcacaUACAUAa |||||| ucuuuuuuuuuuuaagAUGUAUa 2 8 257 279 [mm9:8:63872891-63872913:+] 0.6168 120 6 -5.57 -0.1997 MIMAT0004877 mmu-miR-466c-5p 59009 Sh3rf1 auacAUGUACGU--GUGUGUGUAg | ||| || ||||||||| cacaUCCAUACAGUCACACACAUg 2 19 1171 1194 [mm9:8:63864901-63864924:+] 0.5010 161 7 -17.50 -0.2595 MIMAT0004877 mmu-miR-466c-5p 59009 Sh3rf1 auaCAUGUACGUGUGUGUGUAg || |||| ::||||||| ugcGUUCAUG--UGCACACAUc 2 20 1157 1176 [mm9:8:63864887-63864906:+] 0.5010 156 7 -18.91 -0.1042 MIMAT0004878 mmu-miR-466c-3p 59009 Sh3rf1 agaauacacacgcacaUACAUAu |||||| ucuuuuuuuuuuuaagAUGUAUa 2 8 257 279 [mm9:8:63872891-63872913:+] 0.6168 120 6 -7.83 -0.1997 MIMAT0004879 mmu-miR-466e-5p 59009 Sh3rf1 auacAUGUACAUGUGUGUGUAg |||| || ||||||||| uccaUACA-GU-CACACACAUg 2 19 1175 1194 [mm9:8:63864905-63864924:+] 0.5010 162 7 -18.25 -0.2618 MIMAT0004879 mmu-miR-466e-5p 59009 Sh3rf1 auaCAUGUACAUGUGUGUGUAg || ||||| :||||||| ugcGUUCAUGU--GCACACAUc 2 20 1157 1176 [mm9:8:63864887-63864906:+] 0.5010 160 7 -20.57 -0.1032 MIMAT0004880 mmu-miR-466e-3p 59009 Sh3rf1 agaauacacacgcacaUACAUAu |||||| ucuuuuuuuuuuuaagAUGUAUa 2 8 257 279 [mm9:8:63872891-63872913:+] 0.6168 120 6 -7.83 -0.1997 MIMAT0004882 mmu-miR-466f-3p 59009 Sh3rf1 caCACAUACACACACACAUAc ||| ||| |||||||||| cuGUGCAUG-GUGUGUGUAUu 2 20 1032 1051 [mm9:8:63873666-63873685:+] 0.6296 173 7 -22.54 -0.1752 MIMAT0004882 mmu-miR-466f-3p 59009 Sh3rf1 cacacauacacacaCACAUAc |||||| auuuugggauauuaGUGUAUu 2 8 1880 1900 [mm9:8:63874514-63874534:+] 0.6687 120 6 -5.45 -0.1156 MIMAT0004884 mmu-miR-466h 59009 Sh3rf1 augugUGUUCGUGUAC-GUGUGu ||||| :| || ||||| uuguaACAAGGGCUUGUCACACc 2 18 2115 2137 [mm9:8:63874749-63874771:+] 0.6700 129 0 -15.78 -0.2119 MIMAT0004884 mmu-miR-466h 59009 Sh3rf1 auGUGUGUUCGUGUACGUGUGu | ::|: ||::||||||| uaCCUGCGUUCAUGUGCACACa 2 21 1153 1174 [mm9:8:63864883-63864904:+] 0.5010 156 7 -22.60 -0.4762 MIMAT0004887 mmu-miR-467d* 59009 Sh3rf1 cacauccacacacaUACAUAUa ||||||| uuuuuuuuuuuaagAUGUAUAa 2 9 259 280 [mm9:8:63872893-63872914:+] 0.6168 140 7 -5.14 -1.0514 MIMAT0004887 mmu-miR-467d* 59009 Sh3rf1 cacauccacacacauACAUAUa |||||| uauauauaaaaacacUGUAUAu 2 8 1703 1724 [mm9:8:63874337-63874358:+] 0.6687 120 6 -4.44 -0.1759 MIMAT0004888 mmu-miR-493 59009 Sh3rf1 ggaccgUGUGUCAUCCU-GGAAGu |||||| | || ||||| cucccaACACAG-A-GAUCCUUCu 2 18 1644 1665 [mm9:8:63865374-63865395:+] 0.5485 121 0 -20.63 -0.1907 MIMAT0004892 mmu-miR-568 59009 Sh3rf1 cacaCAUAUGUAAAUAUGUa ||:||: |||||| | auuaGUGUAU-UUUAUAGAa 2 17 1890 1908 [mm9:8:63874524-63874542:+] 0.6687 126 0 -8.11 -0.1062 MIMAT0004892 mmu-miR-568 59009 Sh3rf1 caCACAUAUGUAAAU-AUGUa | ||| || |||| |||| uaGAGUACAC-UUUACUACAc 2 19 1534 1553 [mm9:8:63865264-63865283:+] 0.4982 124 0 -7.57 -0.8180 MIMAT0004893 mmu-miR-574-5p 59009 Sh3rf1 ugUGUGAGUGUGUGUGUG-UGAGu |||| ::||:|||||| |||| acACACAUGCAUACACACAACUCu 2 22 1186 1209 [mm9:8:63864916-63864939:+] 0.5010 149 0 -30.16 -0.7741 MIMAT0004930 mmu-miR-466d-5p 59009 Sh3rf1 guacAUGUACAUGCGUGUGUGu | ||| | ||||||| cacaUCCAUACAGUCACACACa 2 19 1171 1192 [mm9:8:63864901-63864922:+] 0.5010 150 7 -17.00 -0.7238 MIMAT0004931 mmu-miR-466d-3p 59009 Sh3rf1 gauacacacgcacaUACAUAu |||||| uuuuuuuuuuuaagAUGUAUa 2 8 259 279 [mm9:8:63872893-63872913:+] 0.6168 120 6 -5.94 -0.1997 MIMAT0004933 mmu-miR-878-3p 59009 Sh3rf1 agauggGUCACACC--ACA-GUACg ::|||||| ||| |||| ccacagUGGUGUGGACUGUGCAUGg 2 17 1017 1041 [mm9:8:63873651-63873675:+] 0.6296 123 0 -17.93 -0.1828 MIMAT0004938 mmu-miR-875-3p 59009 Sh3rf1 guaucGGAGUCAUAAAAGUCc :||| ||||||||| ucuuuUCUCCAUAUUUUCAGc 2 17 1964 1984 [mm9:8:63874598-63874618:+] 0.6687 160 7 -14.38 -0.8256 MIMAT0005293 mmu-miR-467e 59009 Sh3rf1 ugUAUAUGUACGAGUGUGA-AUa |||||:|| ||||| || auAUAUAUAUAAAAACACUGUAu 2 21 1700 1722 [mm9:8:63874334-63874356:+] 0.6687 128 0 -13.63 -1.2201 MIMAT0005293 mmu-miR-467e 59009 Sh3rf1 ugUAUAUGUACGAGUGU-GAAUa :|: ::||| |||| |||| gaGUGGCUGUGCCCACACCUUAc 2 21 1322 1344 [mm9:8:63873956-63873978:+] 0.5815 124 0 -11.90 -0.1574 MIMAT0005293 mmu-miR-467e 59009 Sh3rf1 uguauauguaCGAGUGUGAAUa |:| ||||||| uuuccccuuaGUUAACACUUAa 2 13 171 192 [mm9:8:63863901-63863922:+] 0.4845 148 7 -9.37 -0.8941 MIMAT0005294 mmu-miR-467e* 59009 Sh3rf1 uauauccacacacaUACAUAUa ||||||| uuuuuuuuuuuaagAUGUAUAa 2 9 259 280 [mm9:8:63872893-63872914:+] 0.6168 140 7 -5.14 -1.0514 MIMAT0005294 mmu-miR-467e* 59009 Sh3rf1 uauauccacacacauACAUAUa |||||| uauauauaaaaacacUGUAUAu 2 8 1703 1724 [mm9:8:63874337-63874358:+] 0.6687 120 6 -5.41 -0.1759 MIMAT0005830 mmu-miR-466l 59009 Sh3rf1 uuaUACACACGUACAUAAA-UAu ||| |||::||||||| || ugcAUG-GUGUGUGUAUUUCAUa 2 20 1035 1056 [mm9:8:63873669-63873690:+] 0.6296 137 0 -15.18 -0.3122 MIMAT0005830 mmu-miR-466l 59009 Sh3rf1 uuauacacacguacaUAAAUAu |||||| uuuuagaaaauauuaAUUUAUg 2 8 374 395 [mm9:8:63873008-63873029:+] 0.7327 120 6 -3.56 -0.1668 MIMAT0005834 mmu-miR-466i 59009 Sh3rf1 aucACACAUACACACACACAUa |||| ||| ||||||||| gacUGUGCAUG-GUGUGUGUAu 2 20 1030 1050 [mm9:8:63873664-63873684:+] 0.6296 173 7 -23.14 -0.3768 MIMAT0005835 mmu-miR-1-2-as 59009 Sh3rf1 accUUACAUUUCUUCAUACAu :|||| |||||||| cgaGAUGU-CUUAAGUAUGUu 2 19 1158 1177 [mm9:8:63873792-63873811:+] 0.5500 148 7 -11.55 -0.2840 MIMAT0005837 mmu-miR-1187 59009 Sh3rf1 aaUGUGUGUAUGU--GUGUGUGUAu |||: |||||| ||||||||| acACAUCCAUACAGUCACACACAUg 2 22 1170 1194 [mm9:8:63864900-63864924:+] 0.5010 180 7 -26.68 -0.2595 MIMAT0005837 mmu-miR-1187 59009 Sh3rf1 aaUGUGUGUA--UGUGUGUGUGUAu || ::|:| |::::||||||| uuACCUGCGUUCAUGUGCACACAUc 2 22 1152 1176 [mm9:8:63864882-63864906:+] 0.5010 156 7 -18.88 -0.1063 MIMAT0005839 mmu-miR-669f 59009 Sh3rf1 uaugcacacacacauACAUAUAc ||||||| uauauauaaaaacacUGUAUAUu 2 9 1703 1725 [mm9:8:63874337-63874359:+] 0.6687 140 7 -3.84 -0.9883 MIMAT0005839 mmu-miR-669f 59009 Sh3rf1 uaugcacacacacaUACAUAUac ||||||| uuuuuuuuuuuaagAUGUAUAac 3 10 259 281 [mm9:8:63872893-63872915:+] 0.6168 125 0 -4.94 -0.1009 MIMAT0005839 mmu-miR-669f 59009 Sh3rf1 uaUGCACACACACAUACA-UAUAc || || | | |||| |||| uuACUUGGAUAUUCAUGUAAUAUa 2 22 1765 1788 [mm9:8:63874399-63874422:+] 0.6687 121 0 -4.29 -1.1803 MIMAT0005841 mmu-miR-669h-5p 59009 Sh3rf1 cgugagUUGAUAUGUGGGUACGUa :::| |:: :||||||| aguaggGGUUCUGU-UCCAUGCAg 2 19 576 598 [mm9:8:63864306-63864328:+] 0.5517 144 7 -14.44 -0.1335 MIMAT0005843 mmu-miR-1188 59009 Sh3rf1 aggacCGGGUUGGAGUGUGGu ||::| | ||||||| agaaaGCUUAUCAUCACACCa 2 17 16 36 [mm9:8:63872650-63872670:+] 0.5169 156 7 -19.38 -0.4915 MIMAT0005843 mmu-miR-1188 59009 Sh3rf1 aggaCCGGGUUGGAGUGUGGu |||::: ||||||| caagGGCUUG---UCACACCg 2 18 2121 2138 [mm9:8:63874755-63874772:+] 0.6700 141 7 -19.82 -0.1305 MIMAT0005844 mmu-miR-466f 59009 Sh3rf1 ugUACGUGUACGU-GUGU-GUGCa | || :|| || |||| |||| gaAAGCUUAU-CAUCACACCACGu 2 21 17 39 [mm9:8:63872651-63872673:+] 0.5169 121 0 -19.63 -0.1886 MIMAT0005845 mmu-miR-466k 59009 Sh3rf1 agUGUA--CAUGUACAUGUGUGUGu |||| |||| || ||||||| acACAUCCAUACA-GU-CACACACa 2 22 1170 1192 [mm9:8:63864900-63864922:+] 0.5010 156 7 -24.10 -0.6876 MIMAT0005846 mmu-miR-467f 59009 Sh3rf1 acAUCCACACACACACAUAua | || | | |||||| uuUUGGGAUAUUAGUGUAUuu 3 20 1881 1901 [mm9:8:63874515-63874535:+] 0.6687 127 0 -8.13 -0.1017 MIMAT0005846 mmu-miR-467f 59009 Sh3rf1 acauccacacacacACAUAUa |||||| uuuuuuuuuuaagaUGUAUAa 2 8 260 280 [mm9:8:63872894-63872914:+] 0.6168 120 6 -3.55 -0.1031 MIMAT0005846 mmu-miR-467f 59009 Sh3rf1 acauccacacacacACAUAUa |||||| auauauaaaaacacUGUAUAu 2 8 1704 1724 [mm9:8:63874338-63874358:+] 0.6687 120 6 -4.56 -0.1759 MIMAT0005848 mmu-miR-466j 59009 Sh3rf1 aaugugUGUACGUGUAC-GUGUGu ||| | :| || ||||| guuguaACAAGGGCUUGUCACACc 2 18 2114 2137 [mm9:8:63874748-63874771:+] 0.6700 121 0 -12.17 -0.2159 MIMAT0005848 mmu-miR-466j 59009 Sh3rf1 aaUGUGUGUACGUGUACGUGUGu || ::|:| ||::||||||| uuACCUGCGUUCAUGUGCACACa 2 22 1152 1174 [mm9:8:63864882-63864904:+] 0.5010 169 7 -24.61 -0.4694 MIMAT0005848 mmu-miR-466j 59009 Sh3rf1 aaUGUGUGUACGUGUACGU-GUGu :|:| | ||| ::|||| ||| ugGCGCUCUUGC-UGUGCACCACc 2 22 979 1001 [mm9:8:63864709-63864731:+] 0.5006 123 0 -15.69 -0.2387 MIMAT0005849 mmu-miR-1191 59009 Sh3rf1 aucccgauguaucaUUCUGAc |||||| uuuaaaaaagcaaaAAGACUa 2 8 1911 1931 [mm9:8:63874545-63874565:+] 0.6687 120 6 -5.42 -0.1347 MIMAT0005852 mmu-miR-1194 59009 Sh3rf1 uccUAGAUCGUCAAUGAGUAAg | :| | | ||||||| gaaAGUUCACUGCGACUCAUUa 2 20 686 707 [mm9:8:63864416-63864437:+] 0.5395 143 7 -11.53 -0.1021 MIMAT0005853 mmu-miR-669e 59009 Sh3rf1 uaCUUGUACGUGUGUG-UUCUGu ||| | :|| :|| ||||| aaGAAAACAUACUUACUAAGACa 2 21 640 662 [mm9:8:63864370-63864392:+] 0.5370 124 0 -14.57 -0.6316 MIMAT0005854 mmu-miR-467g 59009 Sh3rf1 uauauacacacacaUACAUAu |||||| uuuuuuuuuuuaagAUGUAUa 2 8 259 279 [mm9:8:63872893-63872913:+] 0.6168 120 6 -5.94 -0.1978 MIMAT0005855 mmu-miR-467h 59009 Sh3rf1 ugUAUAUGUACGUGUGUGA-AUa |||||:|| | ||||| || auAUAUAUAUAAAAACACUGUAu 2 21 1700 1722 [mm9:8:63874334-63874356:+] 0.6687 136 0 -13.63 -1.2201 MIMAT0005855 mmu-miR-467h 59009 Sh3rf1 ugUAUAUGUACGUGUGU-GAAUa :|: ::||| |||| |||| gaGUGGCUGUGCCCACACCUUAc 2 21 1322 1344 [mm9:8:63873956-63873978:+] 0.5815 124 0 -12.41 -0.1574 MIMAT0005855 mmu-miR-467h 59009 Sh3rf1 uguauauguacgugUGUGAAUa ||||||| uuuccccuuaguuaACACUUAa 2 9 171 192 [mm9:8:63863901-63863922:+] 0.4845 140 7 -7.68 -0.8941 MIMAT0005858 mmu-miR-1197 59009 Sh3rf1 ucuucaucugGUACACAGGAu |||||||||| ugcuuauccaCAUGUGUCCUc 2 12 1229 1249 [mm9:8:63873863-63873883:+] 0.5723 155 7 -17.69 -0.1354 MIMAT0005860 mmu-miR-1199 59009 Sh3rf1 ggcgCGCUGGCCCUGAGUCu | || | ||||||| gcugGAGAGC-UGACUCAGc 2 17 1051 1069 [mm9:8:63864781-63864799:+] 0.5010 142 7 -17.19 -0.1916 MIMAT0005860 mmu-miR-1199 59009 Sh3rf1 ggcgcgcuggccCUGAGUCu ||||||| ucuugguucauaGACUCAGa 2 9 510 529 [mm9:8:63864240-63864259:+] 0.5517 140 7 -16.79 -0.6612 MIMAT0007868 mmu-miR-1903 59009 Sh3rf1 acagaGUCCUUCU-UCUUCU-UCc ||| ||| :||||| || gagagCAGAUAGAGGGAAGACAGc 2 18 1438 1461 [mm9:8:63874072-63874095:+] 0.5780 120 0 -14.28 -0.1045 MIMAT0007876 mmu-miR-1907 59009 Sh3rf1 uggagGUCUAGG---AGAC-GACGAg :||:||| |||| ||||| guuagUAGGUCCCCAUCUGUCUGCUu 2 18 613 638 [mm9:8:63873247-63873272:+] 0.5995 124 0 -22.24 -0.3882 MIMAT0007877 mmu-miR-1894-5p 59009 Sh3rf1 ucuccgucCACCAUCCCCU-CUc ||||| ||||| || gucacaccGUGGU-GGGGAUGAg 2 15 2130 2151 [mm9:8:63874764-63874785:+] 0.6755 120 0 -23.57 -0.1433 MIMAT0009392 mmu-miR-1929 59009 Sh3rf1 gagaCGAGAUAUUUCAGGA-UCUu | |||: |||||| ||| ugugGGUCUGGCUAGUCCUGAGAg 2 20 1419 1442 [mm9:8:63874053-63874076:+] 0.6053 123 0 -20.18 -0.1635 MIMAT0009396 mmu-miR-1933-5p 59009 Sh3rf1 uuUGAUUCUGGCUUGUGGU-ACUGa ||||| :| | |||| |||| aaACUAAAGC--ACAACCAUUGACu 2 23 728 750 [mm9:8:63873362-63873384:+] 0.5940 123 0 -17.40 -0.2138 MIMAT0009399 mmu-miR-1935 59009 Sh3rf1 ucUCUAGGCGGUCGGAGACGGa | |||:||| ||||||||| agAAAUCUGCCUGCCUCUGCCu 2 21 1412 1433 [mm9:8:63865142-63865163:+] 0.5011 180 7 -36.94 -0.1042 MIMAT0009406 mmu-miR-1941-3p 59009 Sh3rf1 uacccucuAUGACGAUUCUAc | :| :|||||| ugucuuuuUUUUUUUAAGAUg 2 14 255 275 [mm9:8:63872889-63872909:+] 0.6168 129 6 -8.55 -0.1418 MIMAT0009407 mmu-miR-1942 59009 Sh3rf1 guugGUC-UACUUCUGUAGACu :|| | ||: ||||||| uucaUAGAAAGAGCACAUCUGu 2 18 63 84 [mm9:8:63872697-63872718:+] 0.5876 152 7 -16.02 -0.1502 MIMAT0009412 mmu-miR-1946a 59009 Sh3rf1 uuUUCACACACGGUGGUGACGGGCCGa |:| |||||||||||||||||||| aaAGGCGUGUGCCACCACUGCCCGGCu 2 26 1456 1482 [mm9:8:63865186-63865212:+] 0.5011 213 7 -55.15 -0.2126 MIMAT0009412 mmu-miR-1946a 59009 Sh3rf1 uuuucaCACACGGUGGUGACGGG-CCGa |||| |: ::|||||| ||| gugacgGUGUCCUCAUGCUGCCCUGGCu 2 22 900 927 [mm9:8:63864630-63864657:+] 0.5006 133 0 -31.04 -0.1394 MIMAT0009416 mmu-miR-1949 59009 Sh3rf1 uuGAUACGACUGU---AGGACCAUAUc | :|| | |:| |||||||||| auCCGUGGUAAUAGCUUCCUGGUAUAa 2 23 1999 2025 [mm9:8:63874633-63874659:+] 0.6645 161 7 -17.13 -0.3582 MIMAT0009418 mmu-miR-669l 59009 Sh3rf1 ugUAUAUGUACG--UGUGUGUUGa | | |||||| ||||||||| ucACACACAUGCAUACACACAACu 2 21 1184 1207 [mm9:8:63864914-63864937:+] 0.5010 171 7 -23.45 -0.5330 MIMAT0009419 mmu-miR-669m 59009 Sh3rf1 uauACAAACACACCUACAUAUa | ||| | |||||||| uuuUUUUUUUUAAGAUGUAUAa 2 20 259 280 [mm9:8:63872893-63872914:+] 0.6168 155 7 -8.17 -1.0434 MIMAT0009419 mmu-miR-669m 59009 Sh3rf1 uauacaaacacaccuACAUAUa |||||| uauauauaaaaacacUGUAUAu 2 8 1703 1724 [mm9:8:63874337-63874358:+] 0.6687 120 6 -4.44 -0.1742 MIMAT0009421 mmu-miR-669o 59009 Sh3rf1 ugUAUUUGUACG--UGUGUGUUGAu | | |||||| |||||||||| ucACACACAUGCAUACACACAACUc 2 22 1184 1208 [mm9:8:63864914-63864938:+] 0.5010 176 7 -22.96 -0.7408 MIMAT0009431 mmu-miR-1958 59009 Sh3rf1 ugaaugacgaAGGUGAAA-GGAu |:|||||| ||| augacuuaaaUUCACUUUGCCUu 2 13 1236 1258 [mm9:8:63864966-63864988:+] 0.5179 120 0 -15.83 -0.4820 MIMAT0009435 mmu-miR-1962 59009 Sh3rf1 uacacagggucacggUCGGAGa |||||| uaacauaaacauuuaAGCCUCa 2 8 761 782 [mm9:8:63864491-63864512:+] 0.5387 120 6 -9.98 -0.1023 MIMAT0009437 mmu-miR-1964 59009 Sh3rf1 uuuCGGCCUCGGGUCUUCAGCc | :||:| : |||||||| cguGGUGGGGAUGAGAAGUCGa 2 20 2137 2158 [mm9:8:63874771-63874792:+] 0.6755 159 7 -22.88 -0.5325 MIMAT0009438 mmu-miR-1965 59009 Sh3rf1 acGCGGUGAUGCCGGGCCGAa :||||| || |||||||| ugUGCCACCACUGCCCGGCUc 2 20 1463 1483 [mm9:8:63865193-63865213:+] 0.5011 175 7 -34.07 -0.1703 MIMAT0009439 mmu-miR-1966 59009 Sh3rf1 cugAGAGAGGACUCGGUCGAGGGAa |||: | |:: ||||||| augUCUUAAGUAUGUUUGCUCCCUc 2 23 1162 1186 [mm9:8:63873796-63873820:+] 0.5500 150 7 -17.72 -0.1627 MIMAT0009442 mmu-miR-1969 59009 Sh3rf1 uggguaCAAUUUCAGAG-GUAGAa |||||| ||| ||||| acgcugGUUAAA--CUCUCAUCUg 2 18 2025 2046 [mm9:8:63874659-63874680:+] 0.6645 126 0 -14.89 -0.5514 MIMAT0009457 mmu-miR-1839-3p 59009 Sh3rf1 cgacaaCCAUCU----AUUCAUCCAGa |||||| | |||||||| acuccaGGUAGAGGAGUUAGUAGGUCc 2 18 598 624 [mm9:8:63873232-63873258:+] 0.5995 156 7 -23.05 -0.1236 MIMAT0009458 mmu-miR-1981 59009 Sh3rf1 cggUGCAGAUUCGGGUCGGAA-AUg |:|| ||| : ||||| || cugAUGUGUAAAGUGUGCCUUGUAa 2 22 206 230 [mm9:8:63872840-63872864:+] 0.6168 121 0 -12.78 -0.4875 MIMAT0009459 mmu-miR-1982* 59009 Sh3rf1 ggAGGGGU-CCUGGGAGGGUu ||| || | ::||||||| uaUCCACAUGUGUCCUCCCAg 2 19 1233 1253 [mm9:8:63873867-63873887:+] 0.5723 157 7 -22.90 -0.1180 MIMAT0009459 mmu-miR-1982* 59009 Sh3rf1 ggagggguccuGGGAGGGUu |||||||| cuaaaaauguuCCCUCCCAa 2 10 1631 1650 [mm9:8:63865361-63865380:+] 0.5485 145 7 -21.23 -0.6053 MIMAT0011210 mmu-miR-2134 59009 Sh3rf1 cguGGGGCAAAGGGUUCUg || | | ||||||| gauCCGCAUGCCCCAAGAc 2 17 864 882 [mm9:8:63873498-63873516:+] 0.6594 148 7 -20.72 -0.2144 MIMAT0011214 mmu-miR-2138 59009 Sh3rf1 uaAGGCG-GUUCGGGCAAGGGAa ||:|: || | |:||||||| ucUCUGUACACG-CUGUUCCCUc 2 21 795 816 [mm9:8:63864525-63864546:+] 0.5387 157 7 -20.80 -0.3310 MIMAT0011214 mmu-miR-2138 59009 Sh3rf1 uaAGGCGGUUCGGGCAAGGGAa | | |:|| :||||||| guUACCCUAAAAAUGUUCCCUc 2 21 1625 1646 [mm9:8:63865355-63865376:+] 0.5485 152 7 -20.07 -0.5187 MIMAT0011214 mmu-miR-2138 59009 Sh3rf1 uaAGGCGGUUCGGGCAAGGGAa |::| :|| :||||||| agUUUGGAGAG-AUGUUCCCUu 2 21 850 870 [mm9:8:63864580-63864600:+] 0.5387 146 7 -20.70 -0.3020 MIMAT0011222 mmu-miR-2146 59009 Sh3rf1 guguaccuuGGGAAGAGGUg |::||||||| uuuaccuguCUUUUCUCCAu 2 12 1956 1975 [mm9:8:63874590-63874609:+] 0.6687 147 7 -17.20 -1.1101 MIMAT0012774 mmu-miR-664 59009 Sh3rf1 auCCGACCCCUCAUUUACU-UAu | ||| :|||||||| || aaGCCUGAUUGGUAAAUGACAUa 2 21 104 126 [mm9:8:63863834-63863856:+] 0.5111 128 0 -14.05 -0.4921 MIMAT0015645 mmu-miR-3473 59009 Sh3rf1 ccGACUCGGUAGAGAGGu |||:|: ||||||| agCUGGGU--UCUCUCCu 2 17 414 429 [mm9:8:63873048-63873063:+] 0.7327 149 7 -21.72 -0.4324 MIMAT0000123 mmu-miR-1 59009 Sh3rf1 uaUGUAUGAAGAAAUGU-AAGGu | | |||: |||| |||| ugAGACCCUUUAAUACAGUUCCc 2 21 260 282 [mm9:8:63863990-63864012:+] 0.5014 120 0 -8.00 -0.3659 MIMAT0000124 mmu-miR-15b 59009 Sh3rf1 acAUUUGGUACUACAC-GACGAu ||:::| || || ||||| agUAGGUCCCCAUCUGUCUGCUu 2 21 616 638 [mm9:8:63873250-63873272:+] 0.5995 120 0 -16.26 -0.3822 MIMAT0000126 mmu-miR-27b 59009 Sh3rf1 cgucuugaaucgGUGACACUu |||||||| gcuguaagaaaaCACUGUGAa 2 10 941 961 [mm9:8:63873575-63873595:+] 0.6359 145 7 -16.94 -0.7121 MIMAT0000128 mmu-miR-30a 59009 Sh3rf1 gaaggUCAGCUCCU-ACAAAUGu | | || | ||||||| acuaaAAUGGACAAUUGUUUACa 2 18 280 302 [mm9:8:63872914-63872936:+] 0.6719 144 7 -11.82 -1.1625 MIMAT0000130 mmu-miR-30b 59009 Sh3rf1 ucgacUCACAUCCU-ACAAAUGu | || | | ||||||| acuaaAAUGGACAAUUGUUUACa 2 18 280 302 [mm9:8:63872914-63872936:+] 0.6719 144 7 -10.46 -1.1625 MIMAT0000133 mmu-miR-101a 59009 Sh3rf1 aagucaauAGUGUCAUGACAu |: | ||||||| cuaaaaacUUUCUGUACUGUa 2 14 1568 1588 [mm9:8:63865298-63865318:+] 0.5152 145 7 -11.56 -0.7635 MIMAT0000134 mmu-miR-124 59009 Sh3rf1 ccGUAAGUGGCGCACGGAAu ::| :| |:||||||| gaUGUGUAAAGUGUGCCUUg 2 19 208 227 [mm9:8:63872842-63872861:+] 0.6168 150 7 -17.59 -0.5121 MIMAT0004528 mmu-miR-125a-3p 59009 Sh3rf1 ccGA-GGGUUCUUGGAGUG-GACa || :|| :||| ||||| ||| ggCUGUCCUGGAA-CUCACUCUGu 2 21 1367 1389 [mm9:8:63865097-63865119:+] 0.5011 125 0 -25.53 -0.1683 MIMAT0000140 mmu-miR-128 59009 Sh3rf1 uuucucuggccaaGUGACACu ||||||| ggcuguaagaaaaCACUGUGa 2 9 940 960 [mm9:8:63873574-63873594:+] 0.6359 140 7 -15.52 -1.0999 MIMAT0000140 mmu-miR-128 59009 Sh3rf1 uuuCUCUGGCC--AAGU-GACACu || |:| | |||| ||||| gcuGACAUCAGCUUUCAUCUGUGu 2 19 1825 1848 [mm9:8:63874459-63874482:+] 0.6687 121 0 -13.72 -0.2494 MIMAT0000140 mmu-miR-128 59009 Sh3rf1 uuucucuggccaaGUGACAcu |||||| auauauauaaaaaCACUGUau 3 9 1702 1722 [mm9:8:63874336-63874356:+] 0.6687 120 0 -7.77 -0.1918 MIMAT0000146 mmu-miR-134 59009 Sh3rf1 ggggagaccAGUUGGUCAGUGu || ::||||||| cacaugauaUCUGUCAGUCACu 2 14 201 222 [mm9:8:63863931-63863952:+] 0.4834 149 7 -15.50 -0.5814 MIMAT0000146 mmu-miR-134 59009 Sh3rf1 ggggagaccaGUUGGUCAGUGu || ||||||| ugcacacaucCAUACAGUCACa 2 13 1167 1188 [mm9:8:63864897-63864918:+] 0.5010 144 7 -16.25 -0.8480 MIMAT0000148 mmu-miR-136 59009 Sh3rf1 gguagUA-GUUUUG--UUUACCUca || :| ||| ||||||| uuaagAUGUAUAACUAAAAUGGAca 3 18 268 292 [mm9:8:63872902-63872926:+] 0.6719 131 0 -7.01 -0.2165 MIMAT0000153 mmu-miR-141 59009 Sh3rf1 gguagaAAUG---GUCU-GUCACAAu |||| || | ||||||| uguuacUUACCAACACACCAGUGUUu 2 17 148 173 [mm9:8:63863878-63863903:+] 0.4953 146 7 -14.82 -0.1335 MIMAT0000157 mmu-miR-145 59009 Sh3rf1 ucccuAAGGAC--CCUUUUGACCUg | || | ||||||||||| guaucUGCCAGGAGGAAAACUGGAa 2 19 664 688 [mm9:8:63864394-63864418:+] 0.5370 161 7 -21.90 -0.4862 MIMAT0000158 mmu-miR-146a 59009 Sh3rf1 uuGGGUACCUUAAGUCA-AGAGu |:||| : ||:||| |||| gcCUCAUCUGUUUUAGUGUCUCu 2 21 777 799 [mm9:8:63864507-63864529:+] 0.5387 128 0 -14.16 -0.4087 MIMAT0000159 mmu-miR-149 59009 Sh3rf1 cccUCACUU-CUGUG-CCUCG-GUCu :|| || ||||: ||||| ||| auuGGUAAAUGACAUAGGAGCUCAGg 2 21 111 136 [mm9:8:63863841-63863866:+] 0.5111 130 0 -23.04 -0.1286 MIMAT0000160 mmu-miR-150 59009 Sh3rf1 gugaccauguucccAACCCUcu |||||| uaauauucuuuauuUUGGGAua 3 9 1869 1890 [mm9:8:63874503-63874524:+] 0.6687 120 0 -6.22 -0.1939 MIMAT0000162 mmu-miR-152 59009 Sh3rf1 gguucaagacaGUACGUGACu ||||||||| gcaguuaaaagCAUGCACUGu 2 11 1068 1088 [mm9:8:63864798-63864818:+] 0.5010 150 7 -19.90 -0.2961 MIMAT0000208 mmu-miR-10b 59009 Sh3rf1 gugUUUAAGCCAAGAUGUC-CCAu ||| |: || |||| ||| guaAAAGUUUGUGAGACAGUGGUg 2 21 886 909 [mm9:8:63873520-63873543:+] 0.6508 120 0 -15.70 -0.5154 MIMAT0000208 mmu-miR-10b 59009 Sh3rf1 guguuuAAGC-CAAGA----UGUCCCAu |||| |||:| ||||||| uuuuucUUCGUGUUUUCAAGACAGGGUu 2 18 1324 1351 [mm9:8:63865054-63865081:+] 0.4896 151 7 -19.01 -0.2391 MIMAT0000209 mmu-miR-129-5p 59009 Sh3rf1 cgUUCGGG-UCUGGCGUUUUUc || ::: | | ||||||| gaAAUUUUAAAAAAGCAAAAAg 2 20 1906 1927 [mm9:8:63874540-63874561:+] 0.6687 142 7 -9.14 -1.1024 MIMAT0000210 mmu-miR-181a 59009 Sh3rf1 ugAGUGGCUGUCGCAACUU-ACAa |: || :|| ||||| ||| ugUUCCCUCUAGACUUGAAUUGUa 2 22 808 831 [mm9:8:63864538-63864561:+] 0.5387 121 0 -12.11 -0.7295 MIMAT0000213 mmu-miR-184 59009 Sh3rf1 ugggaauAGUCAAGAGG-CAGGu |||| ||||| |||| cccaaguUCAG-UCUCCAGUCCc 2 16 1101 1122 [mm9:8:63864831-63864852:+] 0.5010 125 0 -23.98 -0.1022 MIMAT0000214 mmu-miR-185 59009 Sh3rf1 agUCCUUGACGGAAAGAGAGGu || |:||| |||||||| ggAGAAGCUG-GGUUCUCUCCu 2 21 409 429 [mm9:8:63873043-63873063:+] 0.7327 158 7 -21.24 -0.4610 MIMAT0000215 mmu-miR-186 59009 Sh3rf1 ucggGUUUUCCUCUUAAGAAAc :|| || | |||||||| cuugUAAUAGCA-AAUUCUUUg 2 19 344 364 [mm9:8:63872978-63872998:+] 0.7270 156 7 -11.11 -0.8092 MIMAT0000215 mmu-miR-186 59009 Sh3rf1 ucgGGUUUUC-CUCU-UAAGAAAc :::|:|| ||| ||||||| cugUUGAGAGCAAGAGAUUCUUUu 2 20 432 455 [mm9:8:63873066-63873089:+] 0.6464 153 7 -11.10 -0.2239 MIMAT0000215 mmu-miR-186 59009 Sh3rf1 ucgGGUUUUCC--UCU--UAAGAAAc |||| : | | | ||||||| acaCCAAUGUGUCAUAAUAUUCUUUa 2 20 1855 1880 [mm9:8:63874489-63874514:+] 0.6687 141 7 -7.67 -1.2016 MIMAT0000224 mmu-miR-194 59009 Sh3rf1 agguguaccucAACGACAAUGu || ||||||| caggcuuucuuUUUCUGUUACu 2 12 133 154 [mm9:8:63863863-63863884:+] 0.4953 147 7 -10.74 -0.7265 MIMAT0000229 mmu-miR-199a-5p 59009 Sh3rf1 cuUGUCCAUCAGACUUGUGACcc |:| || | ||||||| auAUAUAUA-UAAAAACACUGua 3 22 1700 1721 [mm9:8:63874334-63874355:+] 0.6687 127 0 -8.83 -0.3968 MIMAT0000239 mmu-miR-206 59009 Sh3rf1 ggUGUGUGAAGGAAUGU-AAGGu | || |||: |||| |||| ugAGACCCUUUAAUACAGUUCCc 2 21 260 282 [mm9:8:63863990-63864012:+] 0.5014 128 0 -11.17 -0.3630 MIMAT0000248 mmu-miR-30e 59009 Sh3rf1 gaagGUCAGUUCCUACAAAUGu ::| ||| ||||||| aaaaUGGACAA--UUGUUUACa 2 19 283 302 [mm9:8:63872917-63872936:+] 0.7270 143 7 -10.11 -1.2139 MIMAT0004576 mmu-miR-296-3p 59009 Sh3rf1 ccucucggagGUGGGUUGGGAg ::::||||||| uaaaaauugaUGUUCAACCCUu 2 13 2214 2235 [mm9:8:63874848-63874869:+] 0.6184 144 7 -17.66 -1.1283 MIMAT0000381 mmu-miR-34c 59009 Sh3rf1 cgUUAGUCGAUUGAU-GUGACGGa |:|| ::| | ||||||| ccAGUCCCAGGGCAAUCACUGCCu 2 22 1115 1138 [mm9:8:63864845-63864868:+] 0.5010 144 7 -20.87 -0.1515 MIMAT0000382 mmu-miR-34b-5p 59009 Sh3rf1 uguuaGUCGAUUAAUGUGACGGa ||| | | ||||||| aguccCAGGGCAAU-CACUGCCu 2 19 1117 1138 [mm9:8:63864847-63864868:+] 0.5010 144 7 -17.47 -0.1405 MIMAT0000385 mmu-miR-106a 59009 Sh3rf1 gaUGGACGUGACA-AUCGUGAAAc :|||| |:| | |:||||||| ccGCCUG-AUUUUGUGGCACUUUu 2 22 1298 1320 [mm9:8:63865028-63865050:+] 0.5179 162 7 -21.18 -0.5452 MIMAT0000386 mmu-miR-106b 59009 Sh3rf1 uaGACGUGACA-GUCGUGAAAu ||| |:| | ::||||||| gcCUG-AUUUUGUGGCACUUUu 2 20 1300 1320 [mm9:8:63865030-63865050:+] 0.5179 152 7 -17.81 -0.5452 MIMAT0000514 mmu-miR-30c 59009 Sh3rf1 cgacUCUCACAUCCU-ACAAAUGu | | || | | ||||||| aacuAAAAUGGACAAUUGUUUACa 2 20 279 302 [mm9:8:63872913-63872936:+] 0.6719 146 7 -9.89 -1.1625 MIMAT0000514 mmu-miR-30c 59009 Sh3rf1 cgACUCUCACAUCCU---ACAA-AUGu ||: |||| | || |||| ||| ccUGGUAGUGAAUGACCUUGUUCUACg 2 22 1461 1487 [mm9:8:63874095-63874121:+] 0.5507 124 0 -14.72 -0.2435 MIMAT0000515 mmu-miR-30d 59009 Sh3rf1 gaaggucagccccuACAAAUGu ||||||| cuaaaauggacaauUGUUUACa 2 9 281 302 [mm9:8:63872915-63872936:+] 0.6719 140 7 -11.60 -1.1644 MIMAT0000516 mmu-miR-148a 59009 Sh3rf1 uguuucaagacaucACGUGACu ||||||| agcaguuaaaagcaUGCACUGu 2 9 1067 1088 [mm9:8:63864797-63864818:+] 0.5010 140 7 -13.43 -0.2961 MIMAT0000519 mmu-miR-200a 59009 Sh3rf1 uguagcAAUG---GUCU-GUCACAAu |||| || | ||||||| uguuacUUACCAACACACCAGUGUUu 2 17 148 173 [mm9:8:63863878-63863903:+] 0.4953 146 7 -14.82 -0.1335 MIMAT0000529 mmu-miR-20a 59009 Sh3rf1 gaUGGACGUGAUAU-UCGUGAAAu :|||| |:| |: :||||||| ccGCCUG-AUUUUGUGGCACUUUu 2 22 1298 1320 [mm9:8:63865028-63865050:+] 0.5179 158 7 -20.09 -0.5452 MIMAT0000533 mmu-miR-26a 59009 Sh3rf1 ucggauaggaccuAAUGAACUu |||||||: uuaaagaaauacuUUACUUGGa 2 10 1752 1773 [mm9:8:63874386-63874407:+] 0.6687 129 0 -9.80 -0.2085 MIMAT0000533 mmu-miR-26a 59009 Sh3rf1 ucggauaggaccuaaUGAACUu |||||| auuugcuuuuuuaaaACUUGAa 2 8 318 339 [mm9:8:63872952-63872973:+] 0.7270 120 6 -9.23 -0.2250 MIMAT0000534 mmu-miR-26b 59009 Sh3rf1 uggauaggacuuAAUGAACUu |||||||: uaaagaaauacuUUACUUGGa 2 10 1753 1773 [mm9:8:63874387-63874407:+] 0.6687 129 0 -9.19 -0.2085 MIMAT0000534 mmu-miR-26b 59009 Sh3rf1 uggauaggacuuaaUGAACUu |||||| uuugcuuuuuuaaaACUUGAa 2 8 319 339 [mm9:8:63872953-63872973:+] 0.7270 120 6 -8.50 -0.2250 MIMAT0000537 mmu-miR-27a 59009 Sh3rf1 cgccuugaaucgGUGACACUu |||||||| gcuguaagaaaaCACUGUGAa 2 10 941 961 [mm9:8:63873575-63873595:+] 0.6359 145 7 -16.61 -0.7121 MIMAT0000540 mmu-miR-93 59009 Sh3rf1 gaUGGACGUGCUUGUCGUGAAAc :|||| : :::||||||| ccGCCUGAUUUUGUGGCACUUUu 2 22 1298 1320 [mm9:8:63865028-63865050:+] 0.5179 153 7 -17.72 -0.5524 MIMAT0000542 mmu-miR-34a 59009 Sh3rf1 uguuGGUCGAUUCUGUGACGGu |||| | ||||||| agucCCAGGGCAAUCACUGCCu 2 19 1117 1138 [mm9:8:63864847-63864868:+] 0.5010 150 7 -19.00 -0.1529 MIMAT0000548 mmu-miR-322 59009 Sh3rf1 aggUUUUGUAC-UUAAC-GACGAc :|||:| | : ||| ||||| cugGAAAUACGCGUUUGUCUGCUa 2 20 749 772 [mm9:8:63873383-63873406:+] 0.6050 122 0 -9.44 -0.1650 MIMAT0000559 mmu-miR-326 59009 Sh3rf1 ugACCUCC--UUC----CCGGGUCUCc |||||| ||| ||||||| acUGGAGGUAAAGCACCCACCCAGAGa 2 20 431 457 [mm9:8:63864161-63864187:+] 0.4949 145 7 -27.19 -0.5725 MIMAT0000567 mmu-miR-329 59009 Sh3rf1 uuuuuccaauCGACCCACACAa || ||||||| uguggacuguGCAUGGUGUGUg 2 13 1026 1047 [mm9:8:63873660-63873681:+] 0.6296 144 7 -14.07 -0.5864 MIMAT0004642 mmu-miR-330 59009 Sh3rf1 cggAUUCUGUGUCCGGGUCUCu ||| :||| ||||||| aggUAAAGCACCCACCCAGAGa 2 20 436 457 [mm9:8:63864166-63864187:+] 0.4949 159 7 -21.51 -0.5725 MIMAT0000580 mmu-miR-148b 59009 Sh3rf1 uguuUCAAGACAC-UACGUGACu |||| | |||||||| cagcAGUUAAAAGCAUGCACUGu 2 19 1066 1088 [mm9:8:63864796-63864818:+] 0.5010 149 7 -15.73 -0.2961 MIMAT0000584 mmu-miR-339-5p 59009 Sh3rf1 gcacuCGAGGACCUCCUGUCCCu |: ::| | ||||||| ucuucGUGUUUUCAAGACAGGGu 2 19 1328 1350 [mm9:8:63865058-63865080:+] 0.4896 146 7 -22.40 -0.5187 MIMAT0004651 mmu-miR-340-5p 59009 Sh3rf1 uuAGUCAGAGUAACGAAAUAUu | | | : || :|||||| guUAAUUGAUUUUUUUUUAUAu 2 21 1682 1703 [mm9:8:63874316-63874337:+] 0.6687 132 6 -4.50 -0.2176 MIMAT0004651 mmu-miR-340-5p 59009 Sh3rf1 uuagucAGAGUAAC--GAAAUAUu | |:| || :|||||| uugggaUAUUAGUGUAUUUUAUAg 2 17 1883 1906 [mm9:8:63874517-63874540:+] 0.6687 131 6 -9.26 -0.1778 MIMAT0000590 mmu-miR-342-3p 59009 Sh3rf1 ugcccacgcuaaAGACACACUCu |||||||||| caucagcuuucaUCUGUGUGAGu 2 12 1830 1852 [mm9:8:63874464-63874486:+] 0.6687 155 7 -18.51 -0.4658 MIMAT0000590 mmu-miR-342-3p 59009 Sh3rf1 ugcCCACGCUAAAGACACACUCu ||| | | |||||||| aguGGUAGUCUCUGUGUGUGAGu 2 21 806 828 [mm9:8:63873440-63873462:+] 0.6050 152 7 -18.95 -0.2023 MIMAT0000616 mmu-miR-101b 59009 Sh3rf1 aagucgauAGUGUCAUGACAu |: | ||||||| cuaaaaacUUUCUGUACUGUa 2 14 1568 1588 [mm9:8:63865298-63865318:+] 0.5152 145 7 -14.11 -0.7561 MIMAT0000648 mmu-miR-10a 59009 Sh3rf1 guguuuAAGCCUAGA-----UGUCCCAu |||| :|:| ||||||| uuuuucUUCGUGUUUUCAAGACAGGGUu 2 18 1324 1351 [mm9:8:63865054-63865081:+] 0.4896 144 7 -16.52 -0.2391 MIMAT0000649 mmu-miR-17 59009 Sh3rf1 gaUGGACGUGACAU-UCGUGAAAc :|||| |:| |: :||||||| ccGCCUG-AUUUUGUGGCACUUUu 2 22 1298 1320 [mm9:8:63865028-63865050:+] 0.5179 158 7 -21.18 -0.5452 MIMAT0000656 mmu-miR-139-5p 59009 Sh3rf1 gaccUCUGUGCACGUGACAUcu | |:| ||||||| auauAUAUAAAAACACUGUAua 3 19 1702 1723 [mm9:8:63874336-63874357:+] 0.6687 126 0 -8.98 -0.1990 MIMAT0000656 mmu-miR-139-5p 59009 Sh3rf1 gaccucugugcACGUGACAUCu ||:||||||| uaaaaacuuucUGUACUGUAGc 2 12 1569 1590 [mm9:8:63865299-63865320:+] 0.5195 151 7 -14.85 -0.3478 MIMAT0000663 mmu-miR-218 59009 Sh3rf1 uguaccaaucuAGUUCGUGUu | ||||||| aagacgcaaacUAAAGCACAa 2 11 721 741 [mm9:8:63873355-63873375:+] 0.5940 142 7 -10.44 -0.7577 MIMAT0000665 mmu-miR-223 59009 Sh3rf1 accccauAAACUG---UUUGACUGu ||| || :||||||| uagcaauUUUCACUCAGAACUGACc 2 16 1055 1079 [mm9:8:63873689-63873713:+] 0.6296 146 7 -8.96 -0.2446 MIMAT0000666 mmu-miR-320 59009 Sh3rf1 agcgggaGAGUUGGGUCGAAAa || | :||||||| aaaaaagCUGACAUCAGCUUUc 2 16 1819 1840 [mm9:8:63874453-63874474:+] 0.6687 147 7 -12.39 -0.2436 MIMAT0000666 mmu-miR-320 59009 Sh3rf1 agcgggAGAGUUGGGUCGAAAa | |:|| |||||||| gacugaUAUUAAGCCAGCUUUg 2 17 1594 1615 [mm9:8:63865324-63865345:+] 0.5340 160 7 -15.99 -0.3374 MIMAT0000671 mmu-miR-224 59009 Sh3rf1 uugccuuggugaucACUGAAu |||||| caacaacagcaaaaUGACUUa 2 8 1223 1243 [mm9:8:63864953-63864973:+] 0.5094 120 6 -9.36 -0.1101 MIMAT0004684 mmu-miR-362-3p 59009 Sh3rf1 acuuaggaACUUGU-CCACACAa || :|| ||||||| guguggacUGUGCAUGGUGUGUg 2 15 1025 1047 [mm9:8:63873659-63873681:+] 0.6296 149 7 -16.26 -0.5828 MIMAT0000741 mmu-miR-377 59009 Sh3rf1 uguuUUCAACGGAAACACACUa |: || | | ||||||| caucAGCUUUCAUCUGUGUGAg 2 19 1830 1851 [mm9:8:63874464-63874485:+] 0.6687 154 7 -12.65 -0.2408 MIMAT0000741 mmu-miR-377 59009 Sh3rf1 uguuUUCAACGGAAACAC-ACUa | ||| |||||||| ||| uauuAUGUU-CCUUUGUGUUGAa 2 19 1722 1743 [mm9:8:63874356-63874377:+] 0.6687 132 0 -15.51 -1.2779 MIMAT0000748 mmu-miR-383 59009 Sh3rf1 ucGGUGUCAGUGG-AAGACUAGa |:| | |: :: |||||||| ggCUAGAAUUUUUAUUCUGAUCu 2 21 48 70 [mm9:8:63863778-63863800:+] 0.4721 151 7 -16.27 -0.7256 MIMAT0004745 mmu-miR-384-5p 59009 Sh3rf1 uguaacggauccUUAACAAAUGu |||||||||| acuaaaauggacAAUUGUUUACa 2 12 280 302 [mm9:8:63872914-63872936:+] 0.6719 155 7 -14.21 -1.1662 MIMAT0001076 mmu-miR-384-3p 59009 Sh3rf1 uaacACUUGUUAAAGAUCCUUa || | || ||||||| gacuUGUAGUCUUGCUAGGAAa 2 19 1008 1029 [mm9:8:63864738-63864759:+] 0.5022 150 7 -12.99 -0.3364 MIMAT0001091 mmu-miR-410 59009 Sh3rf1 uguccgguAGACACAAUAUAa |:| | |||||| uaauugauUUUUUUUUAUAUa 2 14 1684 1704 [mm9:8:63874318-63874338:+] 0.6687 121 6 -3.17 -0.3333 MIMAT0004750 mmu-miR-425 59009 Sh3rf1 aguugcccucacUAGCACAGUAa | :||||||| ugagucgacaccAAUGUGUCAUa 2 12 1848 1870 [mm9:8:63874482-63874504:+] 0.6687 143 7 -13.35 -1.0341 MIMAT0001542 mmu-miR-449a 59009 Sh3rf1 ugGUCGAUUGUUAUGUGACGGu ||| ::|||| ||||||| ccCAG--GGCAAU-CACUGCCu 2 21 1120 1138 [mm9:8:63864850-63864868:+] 0.5010 155 7 -23.04 -0.1446 MIMAT0003112 mmu-miR-489 59009 Sh3rf1 cgacgguauauacacCACAGUAa ||||||| ugagucgacaccaauGUGUCAUa 2 9 1848 1870 [mm9:8:63874482-63874504:+] 0.6687 140 7 -12.18 -1.0341 MIMAT0003169 mmu-miR-539 59009 Sh3rf1 uguGUGGUUCCUAUUAAAGAGg ||:| | :|:||||||| acuCAUCCAUCGUGAUUUCUCc 2 20 969 990 [mm9:8:63873603-63873624:+] 0.6296 159 7 -19.85 -0.1184 MIMAT0003169 mmu-miR-539 59009 Sh3rf1 ugUGUGGUUC--CUAUUAAAGAGg |:: ||| || |||||||| ggAUGAGAAGUCGACAAUUUCUCa 2 21 2145 2168 [mm9:8:63874779-63874802:+] 0.6755 155 7 -11.47 -0.5875 MIMAT0003187 mmu-miR-20b 59009 Sh3rf1 gaUGGACGUGAUAC-UCGUGAAAc :|||| |:| || :||||||| ccGCCUG-AUUUUGUGGCACUUUu 2 22 1298 1320 [mm9:8:63865028-63865050:+] 0.5179 162 7 -21.90 -0.5452 MIMAT0003729 mmu-miR-216b 59009 Sh3rf1 aguguaAACGGACG-UCUCUAAa ||| || ||||||| ugucugUUGAGAGCAAGAGAUUc 2 17 429 451 [mm9:8:63873063-63873085:+] 0.6464 147 7 -15.45 -0.3829 MIMAT0003453 mmu-miR-497 59009 Sh3rf1 augUUUGGUGU-CACAC-GACGAc :|| :||: || || ||||| cugGAAAUACGCGUUUGUCUGCUa 2 20 749 772 [mm9:8:63873383-63873406:+] 0.6050 122 0 -14.19 -0.1665 MIMAT0003456 mmu-miR-495 59009 Sh3rf1 uucuucacgugguacAAACAAa |||||| uuguuuuuuuuuuuuUUUGUUu 2 8 1538 1559 [mm9:8:63874172-63874193:+] 0.4933 120 6 -3.27 -0.1027 MIMAT0003460 mmu-miR-449c 59009 Sh3rf1 ggucgaUCGUUACGUGACGGa :||||| ||||||| ucccagGGCAAU-CACUGCCu 2 16 1119 1138 [mm9:8:63864849-63864868:+] 0.5010 157 7 -26.86 -0.1419 MIMAT0003475 mmu-miR-146b 59009 Sh3rf1 ucGGA-UACCUUAAGUCA-AGAGu ||| || : ||:||| |||| agCCUCAUCUGUUUUAGUGUCUCu 2 21 776 799 [mm9:8:63864506-63864529:+] 0.5387 123 0 -15.06 -0.4087 MIMAT0003482 mmu-miR-499 59009 Sh3rf1 uuuguagugaCGUUCAGAAUu | |||||||| aagagaguaaGGAAGUCUUAc 2 12 1502 1522 [mm9:8:63874136-63874156:+] 0.5220 147 7 -9.76 -0.2890 MIMAT0004324 mmu-miR-181d 59009 Sh3rf1 ugGGUGGCUGUUGUUACU-UACAa ||| | ::| ||||| |||| agCCAGCUUUGA-AAUGACAUGUu 2 22 1605 1627 [mm9:8:63865335-63865357:+] 0.5340 123 0 -12.63 -0.5246 MIMAT0004847 mmu-miR-882 59009 Sh3rf1 ugauuacgCGA-UUGAGAGAGGa ||| :::||||||| aaggagaaGCUGGGUUCUCUCCu 2 15 407 429 [mm9:8:63873041-63873063:+] 0.7327 149 7 -20.29 -0.4677 MIMAT0004853 mmu-miR-874 59009 Sh3rf1 agcCAGGGAGCCCGGUCCCGUc |||:| | |||||||| ucaGUCUCCAGUCCCAGGGCAa 2 20 1108 1129 [mm9:8:63864838-63864859:+] 0.5010 159 7 -23.89 -0.1392 MIMAT0004869 mmu-miR-421 59009 Sh3rf1 cgcggguuaauuACAGACAACUa |||||||||| uggguucucuccUGUCUGUUGAg 2 12 417 439 [mm9:8:63873051-63873073:+] 0.7327 155 7 -18.57 -0.3809 MIMAT0004869 mmu-miR-421 59009 Sh3rf1 cgcggguuaauuacagACAACUa |||||| auauuauguuccuuugUGUUGAa 2 8 1721 1743 [mm9:8:63874355-63874377:+] 0.6687 120 6 -10.45 -0.3328 MIMAT0004896 mmu-miR-590-3p 59009 Sh3rf1 ugAUCGAAU-AUGUAU-UUUAAu |||: || | :||| ||||| auUAGUGUAUUUUAUAGAAAUUu 2 20 1890 1912 [mm9:8:63874524-63874546:+] 0.6687 126 0 -7.53 -1.1992 MIMAT0004896 mmu-miR-590-3p 59009 Sh3rf1 ugaucGAAUA-UGUAUUU-UAAu | ||| ||||||| ||| guuuuCCUAUAACAUAAACAUUu 2 17 752 774 [mm9:8:63864482-63864504:+] 0.5387 127 0 -4.97 -0.7035 MIMAT0005447 mmu-miR-449b 59009 Sh3rf1 cgGUCGAUUGUU-GUGACGGa ||| ::||| ||||||| ccCAG--GGCAAUCACUGCCu 2 19 1120 1138 [mm9:8:63864850-63864868:+] 0.5010 150 7 -23.74 -0.1515 MIMAT0004936 mmu-miR-873 59009 Sh3rf1 uccucugaguGUUCAAGGAcg :| |||||| cacuguauauUAUGUUCCUuu 3 12 1715 1735 [mm9:8:63874349-63874369:+] 0.6687 123 0 -9.26 -0.1230

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G005725 Sh3rf1 Mus musculus 59009

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Sh3rf1 mmu-miR-223 beg:1068 end:1079 pic:3' ACCCCATAAACTGTTTGACTGT 5'& .||||||| &5' -------------GAACTGAC- 3' Sh3rf1 mmu-miR-692 beg:1624 end:1651 pic:3' CTCACTC--------CGCGAGTTTCTCTA 5'& ||| |. ||.|||||||| &5' ----GAGATCCCATTGT-CTTAAAGAGAT 3' Sh3rf1 mmu-miR-692 beg:433 end:450 pic:3' CTCACTCCGCGAGTTTCTCTA 5'& |||| || ||||||| &5' ---TGAGA-GC---AAGAGAT 3' Sh3rf1 mmu-miR-692 beg:893 end:919 pic:3' CTCACTC---CGCGAGT-TTCTCTA 5'& ||||| |.| | . ||||||| &5' --GTGAGACAGTGGTGGTAAGAGAT 3' Sh3rf1 mmu-miR-218 beg:731 end:742 pic:3' TGTACCAATCTAGTTCGTGTT 5'& |||||||| &5' -------------AAGCACAA 3' Sh3rf1 mmu-miR-881 beg:875 end:888 pic:3' AGATAAGTCTTTTCTGTGTCAA 5'& |||||||||| &5' -----------AAGACACAGT- 3' Sh3rf1 mmu-miR-1942 beg:65 end:84 pic:3' GTTGGTCTACTTC-TGTAGACT 5'& .||| .|| ||||||| &5' ----TAGAAAGAGCACATCTG- 3' Sh3rf1 mmu-miR-678 beg:1144 end:1164 pic:3' GGAGGTCAGGAACGTGGCTCTG 5'& ||| || |||||||. &5' ---CCACTACTG--ACCGAGAT 3' Sh3rf1 mmu-miR-199a-3p beg:1137 end:1156 pic:3' ATTGGTTACACGTCTGATGACA 5'& |||| ||||||| &5' --ACCACCACC---ACTACTG- 3' Sh3rf1 mmu-miR-199b beg:1137 end:1156 pic:3' ATTGGTTACACGTCTGATGACA 5'& |||| ||||||| &5' --ACCACCACC---ACTACTG- 3' Sh3rf1 mmu-miR-27b beg:944 end:962 pic:3' CGTCTTGAATCGGTGACACTT 5'& |||| ||||||||| &5' --AGAAAA----CACTGTGAA 3' Sh3rf1 mmu-miR-27a beg:950 end:962 pic:3' CGCCTTGAATCGGTGACACTT 5'& ||||||||| &5' ------------CACTGTGAA 3' Sh3rf1 mmu-miR-218 beg:64 end:80 pic:3' TGTACCAATCTAGTTCGTGTT 5'& |||| .|||||| &5' -------TAGAAAGAGCACA- 3' Sh3rf1 mmu-miR-499 beg:1509 end:1522 pic:3' TTTGTAGTGACGTTCAGAATT 5'& | |||||||| &5' ----------GGAAGTCTTA- 3' Sh3rf1 mmu-miR-1941-5p beg:461 end:476 pic:3' TTCGGAGACATGGTCGTAGAGGGA 5'& ||. ||||||||| &5' ----------ACT-GCATCTCCC- 3' Sh3rf1 mmu-miR-539 beg:2154 end:2168 pic:3' TGTGTGGTTCCTATTAAAGAGG 5'& || |||||||| &5' ----------GACAATTTCTC- 3' Sh3rf1 mmu-miR-1188 beg:1193 end:1219 pic:3' AGGACCG-----GGTTGGA-GTGTGGT 5'& ||| ..|.|| ||||||| &5' ----GGCACACGTTAGCCAGCACACCA 3' Sh3rf1 mmu-miR-1188 beg:1325 end:1346 pic:3' AGGAC-CGGGT-TGGAGTGTGGT 5'& ||| ||||| ||||.||| &5' --CTGTGCCCACACCTTACA--- 3' Sh3rf1 mmu-miR-1188 beg:2122 end:2138 pic:3' AGGACCGGGTTGGAGTGTGGT 5'& |||. . ||||||| &5' ----GGCT---TGTCACACC- 3' Sh3rf1 mmu-miR-1188 beg:18 end:37 pic:3' AGGACCGGGTTGGAGTGTGGT 5'& ||..| |||||||| &5' -----GCTTATCATCACACCA 3' Sh3rf1 mmu-miR-128 beg:950 end:961 pic:3' TTTCTCTGGCCAAGTGACACT 5'& |||||||| &5' -------------CACTGTGA 3' Sh3rf1 mmu-miR-763 beg:1406 end:1421 pic:3' CGGTGACCAAGAAGGGTCGACC 5'& |||| |||||||| &5' -CCAC--------CCCAGCTG- 3' Sh3rf1 mmu-miR-331-3p beg:141 end:161 pic:3' AAGATCCTATCCGGGTCCCCG 5'& ||.| ||||||||| &5' --CTGGTTAC--CCCAGGGGC 3' Sh3rf1 mmu-miR-92astar beg:1121 end:1140 pic:3' CATTACGGTGGTTAGGGGTGGA 5'& |||| || ||||||| &5' ----TGCC-CCTGCCCCCACC- 3' Sh3rf1 mmu-miR-2145 beg:1113 end:1133 pic:3' TTGGTCCGGGCT--GGGACGA 5'& || |||| |||||| &5' --CCT-GCCCCTGCCCCTGC- 3' Sh3rf1 mmu-miR-2145 beg:466 end:487 pic:3' TTGGTCCGGGCTGGGACGA 5'& |.| ||| ||||||| &5' -ATCTCCCCCTCCCCTGCT 3' Sh3rf1 mmu-miR-2145 beg:481 end:505 pic:3' TTGGTC--CGGGCT--GGGACGA 5'& .|. |||| |||||| &5' -GCTTGCTGCCCTCCTCCCTGC- 3' Sh3rf1 mmu-miR-665 beg:1280 end:1299 pic:3' TCCCTGGAGTCGGAGGACCA 5'& |||| | ||||||| &5' ---GACCACTCGCTCCTGG- 3' Sh3rf1 mmu-miR-24 beg:1352 end:1370 pic:3' GACAAGGACGACTTGACTCGGT 5'& | .||| .||||||| &5' --GGGTCTG----GCTGAGCC- 3' Sh3rf1 mmu-miR-1955 beg:1288 end:1303 pic:3' TTTTCGACGTCACGTAGGACCCTGA 5'& || |||||||||| &5' ------------GC-TCCTGGGACT 3' Sh3rf1 mmu-miR-300 beg:988 end:1004 pic:3' CTTCTCTCGAACGG--GAACGTAT 5'& ||| |||||||. &5' -----------GCCATCTTGCATG 3' Sh3rf1 mmu-miR-291b-5p beg:1379 end:1395 pic:3' CCTCTCCCGGAGGT--GAAACTAG 5'& |||| ||||||| &5' ----------TCCATCCTTTGAT- 3' Sh3rf1 mmu-miR-291a-5p beg:1379 end:1396 pic:3' TCTCTCCCGGAGGT--GAAACTAC 5'& |||| |||||||| &5' ----------TCCATCCTTTGATG 3' Sh3rf1 mmu-miR-291a-5p beg:629 end:642 pic:3' TCTCTCCCGGAGGTGAAACTAC 5'& || ||||||| &5' ----------TCTGCTTTGAT- 3' Sh3rf1 mmu-miR-291b-5p beg:629 end:644 pic:3' CCTCTCCCGGAGGTGAAACTAG 5'& || |||||||| &5' ----------TCTGCTTTGATC 3' Sh3rf1 mmu-miR-130bstar beg:58 end:76 pic:3' TCATCACGTTGTCCCTTTCTCA 5'& |. || ||||||| &5' ------GTTTCATAGAAAGAG- 3' Sh3rf1 mmu-miR-3099star beg:400 end:420 pic:3' GTTCCCGA--CCTTCCTTCGACC 5'& ||.| ||| |||||||| &5' ----GGTTAAGGA--GAAGCTGG 3' Sh3rf1 mmu-miR-132 beg:1288 end:1306 pic:3' GCTGGTACCGACA--TCTGACAAT 5'& ||| .||||||| &5' --------GCTCCTGGGACTGTT- 3' Sh3rf1 mmu-miR-212 beg:1288 end:1306 pic:3' ACCGGCACTGACCTCTGACAAT 5'& ||. |||| ||||||| &5' --GCTC---CTGG-GACTGTT- 3' Sh3rf1 mmu-miR-207 beg:397 end:417 pic:3' CTCCCTCCTCTCGG-TCCTCTTCG 5'& || .|.. ||||||||| &5' -------GATGGTTAAGGAGAAGC 3' Sh3rf1 mmu-miR-362-3p beg:1029 end:1047 pic:3' ACTTAGGAACTTGT-CCACACAA 5'& || .|| ||||||| &5' ------CTGT-GCATGGTGTGT- 3' Sh3rf1 mmu-miR-323-3p beg:1645 end:1661 pic:3' TCTCCAGCTGGCACATTACAC 5'& ||. |||||||| &5' -------GATAC-GTAATGTG 3' Sh3rf1 mmu-miR-1839-3p beg:607 end:624 pic:3' CGACAACCATCTATTCATCCAGA 5'& || || |||||||| &5' ------GG-AGTT-AGTAGGTC- 3' Sh3rf1 mmu-miR-382star beg:1462 end:1476 pic:3' TTTTTCACAACAGGCACTTACT 5'& || |||||||| &5' ----------GTA-GTGAATGA 3' Sh3rf1 mmu-miR-425 beg:1859 end:1870 pic:3' AGTTGCCCTCACTAGCACAGTAA 5'& .||||||| &5' --------------TGTGTCAT- 3' Sh3rf1 mmu-miR-1197 beg:1236 end:1249 pic:3' TCTTCATCTGGTACACAGGAT 5'& |||||||||| &5' ----------CATGTGTCCT- 3' Sh3rf1 mmu-miR-302cstar beg:919 end:935 pic:3' CGTCCATTGGGGTACAATTTCG 5'& |.|.||||||||. &5' ---------CTCGTGTTAAAGT 3' Sh3rf1 mcmv-miR-m01-1 beg:1477 end:1498 pic:3' GGCAAGCTGCAATAAGAGGAGA 5'& .|||| ||| .|||||.||| &5' -TGTTCTACG--GTTCTCTTCT 3' Sh3rf1 mcmv-miR-m108-1 beg:632 end:649 pic:3' GCTGTGCTCGGTGGC-AGTCTTT 5'& ||. ..| ||||||| &5' --------GCT-TTGATCAGAAA 3' Sh3rf1 mcmv-miR-m108-2-5p.1 beg:1310 end:1332 pic:3' GCCACGAGCGCAGCTCACTGGCG 5'& |||.|| |||||.|.|. &5' ----GCTTGCTGGGAGTGGCTGT 3' Sh3rf1 mcmv-miR-m21-1 beg:412 end:431 pic:3' GCCGAACTTGCACAGGGGATA 5'& || || . ||.|||.| &5' --GC-TGGGTTC-TCTCCTGT 3' Sh3rf1 mcmv-miR-M23-2 beg:1116 end:1138 pic:3' GGCGAAC-TGGCTCCGGGGGTA 5'& |.|| .|| ||||||| &5' CTGCCCCTGCCCCTGCCCCCA- 3' Sh3rf1 mcmv-miR-M23-2 beg:610 end:628 pic:3' GGCGAACTGGCTCCGGGGGTA 5'& |.| | |||.|||||| &5' --GTTAGT---AGGTCCCCAT 3' Sh3rf1 mcmv-miR-M44-1 beg:2187 end:2206 pic:3' TGGCGCCGAGACCT-TTTTCTAT 5'& || ||||| .||||.| &5' -----GGA-CTGGATGAAAGGT- 3' Sh3rf1 mcmv-miR-m88-1 beg:656 end:678 pic:3' TCTGGGGCTGTAGCTGAAGAC 5'& |||||. | | ||.|||| &5' AGACCTAATCCTGGATTTCT- 3' Sh3rf1 mghv-miR-M1-3 beg:2028 end:2046 pic:3' TTCGCGTTGAGGACGAGTGGAG 5'& |. || ||||.|| &5' ----GTTAAA-CT-CTCATCT- 3' Sh3rf1 mghv-miR-M1-6 beg:44 end:67 pic:3' TTTTGGTGGAGTGTGTCAAAGT 5'& ||.| ||| .|||||||| &5' AAGAGCACAAA--GCAGTTTCA 3' Sh3rf1 mmu-let-7astar beg:2094 end:2115 pic:3' CCTTTCTGTCATCTAACATATC 5'& ..||||||||||| ||. &5' --GGAGACAGTAGATGG-ATG- 3' Sh3rf1 mmu-let-7bstar beg:1033 end:1050 pic:3' CCCTTCCGTCATCCA-ACATATC 5'& ||| ||| |||.|| &5' ------GCAT--GGTGTGTGTA- 3' Sh3rf1 mmu-let-7c-2star beg:2094 end:2115 pic:3' CCTTTCTGTCATCTAACATATC 5'& ..||||||||||| ||. &5' --GGAGACAGTAGATGG-ATG- 3' Sh3rf1 mmu-miR-1187 beg:1695 end:1718 pic:3' AATGTGTGTATGTGTGTGTGTAT 5'& |||.|.|.|||.| |||| &5' TTATATATATATAAAAACAC--- 3' Sh3rf1 mmu-miR-1196 beg:154 end:175 pic:3' TCCGTCTCCG-TCCATCTAAA 5'& .|||||||| ||| .|| &5' GGGCAGAGGGAAGGAGGA--- 3' Sh3rf1 mmu-miR-129-3p beg:2109 end:2130 pic:3' TACGAAAAACCCCATTCCCGAA 5'& |||.| |||||||| &5' ATGTTGTAAC----AAGGGCTT 3' Sh3rf1 mmu-miR-1-2-as beg:1156 end:1177 pic:3' ACCTTACATTTCTTCATACAT 5'& | |||| |||||||| &5' -GAGATGTCTT-AAGTATGT- 3' Sh3rf1 mmu-miR-130bstar beg:154 end:173 pic:3' TCATCACGTTGTCCCTTTCTCA 5'& .| |||. ||||||.||| &5' ---GG-GCAG-AGGGAAGGAG- 3' Sh3rf1 mmu-miR-135a beg:32 end:56 pic:3' AGTGTATCCTTATTTTTCG-GTAT 5'& |||.|. || ||||.||| || &5' -CACGTGTGACTAAAGAGCACA-- 3' Sh3rf1 mmu-miR-136star beg:391 end:406 pic:3' TTCTGAGTAAACTCTGCTACTA 5'& ||| |.||||.| &5' ----------TGAAATGATGGT 3' Sh3rf1 mmu-miR-138 beg:1204 end:1221 pic:3' GCCGGACTAAGTGTTGTGGTCGA 5'& ||| .| |||||||. &5' --GCCA-----GC-ACACCAGT- 3' Sh3rf1 mmu-miR-138star beg:1576 end:1588 pic:3' GGGACCACAACACTTCATCGGC 5'& |||||||.| &5' -------------AAGTAGCTG 3' Sh3rf1 mmu-miR-139-5p beg:70 end:88 pic:3' GACCTCTGTGCACGTGACATCT 5'& ||| ||| ||||.|| &5' ---GAG-CACAT---CTGTGGA 3' Sh3rf1 mmu-miR-145 beg:739 end:754 pic:3' TCCCTAAGGACCCTTTTGACCTG 5'& || .|||||| &5' -------CCATT---GACTGGA- 3' Sh3rf1 mmu-miR-146a beg:1472 end:1494 pic:3' TTGGGTACCTTAAGTCAAGAGT 5'& .|||. |.|||||| &5' GACCTTGTTCTA-CGGTTCTC- 3' Sh3rf1 mmu-miR-146a beg:406 end:426 pic:3' TTGGGTACCTTA---AGTCAAGAGT 5'& |||. | .|||||| &5' -------GGAGAAGCTGGGTTCTC- 3' Sh3rf1 mmu-miR-146b beg:1483 end:1494 pic:3' TCGGATACCTTAAGTCAAGAGT 5'& |.|||||| &5' -------------CGGTTCTC- 3' Sh3rf1 mmu-miR-146b beg:409 end:426 pic:3' TCGGATAC-CTTA-AGTCAAGAGT 5'& | ||| | .|||||| &5' -------GAGAAGCTGGGTTCTC- 3' Sh3rf1 mmu-miR-154 beg:1461 end:1479 pic:3' GCTTCCGTTGTGCCTATTGGAT 5'& ||.| . ||.|||| &5' ----GGTAGTGA--ATGACCT- 3' Sh3rf1 mmu-miR-181a beg:2098 end:2117 pic:3' TGAGTGGCTGTCG-CAACTTACAA 5'& |||||. | ||.||||| &5' -------GACAGTAGATGGATGTT 3' Sh3rf1 mmu-miR-183 beg:1849 end:1871 pic:3' TCACTTAAGA--TGGT--CACGGTAT 5'& || |||| |||.|||| &5' -------TCGACACCAATGTGTCATA 3' Sh3rf1 mmu-miR-1839-3p beg:1417 end:1428 pic:3' CGACAACCATCTATTCATCCAGA 5'& ||.||||| &5' ---------------GTGGGTCT 3' Sh3rf1 mmu-miR-184 beg:176 end:197 pic:3' TGGGAATAGTCAAGAGGCAGGT 5'& |||. |.| .|| ||||||. &5' ACCTGTGTGGGT--TCCGTCT- 3' Sh3rf1 mmu-miR-187 beg:0 end:16 pic:3' GGCCGACGTTGTGTTCTGTGCT 5'& || ||..||||||. &5' --------AAGACGGGACACGG 3' Sh3rf1 mmu-miR-187 beg:1582 end:1604 pic:3' GGCCGACGTTGTGTT-CTGTGCT 5'& |||| .| |.| ||||.|| &5' ---GCTGGGAAATATTGACATGA 3' Sh3rf1 mmu-miR-188-3p beg:591 end:614 pic:3' ACGTTTGGGA--CGTACACCCTC 5'& |||.||.| |.| |||| &5' -GCAGACTCCAGGTAGA--GGAG 3' Sh3rf1 mmu-miR-188-3p beg:776 end:796 pic:3' ACGTTTGGGACGTA-CACCCTC 5'& || |.| ||. |||||| &5' -GC-AGCA--GCGCCGTGGGA- 3' Sh3rf1 mmu-miR-1894-5p beg:567 end:588 pic:3' TCTCCGTCCACCATCCCCTCTC 5'& .|| ||| ||||||.| &5' --GGGAAGGACCT-GGGGAGGG 3' Sh3rf1 mmu-miR-1902 beg:1166 end:1188 pic:3' TTCAGTACGGATGACGTGGAGA 5'& ||| .|||..|.|| | ||||| &5' AAG-TATGTTTGCT-C-CCTCT 3' Sh3rf1 mmu-miR-1903 beg:151 end:174 pic:3' ACAGAGTCCT--TCT-TCTTCTTCC 5'& ||||. ||| .||||.||| &5' -----CAGGGGCAGAGGGAAGGAGG 3' Sh3rf1 mmu-miR-1904 beg:93 end:116 pic:3' GGAGGGAGGTCTC--CTCGTCTTG 5'& .|.|| ||| |||||||| &5' ---TCTTCAAGAACCGAGCAGAA- 3' Sh3rf1 mmu-miR-1928 beg:1643 end:1664 pic:3' CTCGAC-CGTTACATCGA 5'& ||| |.|||||.||| &5' GAGATACGTAATGTGGCT 3' Sh3rf1 mmu-miR-1933-3p beg:191 end:209 pic:3' TATCAGTGTGACTACCAGGACC 5'& ||| | ||| |||.||| &5' ---GTCTCTCTG--GGTTCTG- 3' Sh3rf1 mmu-miR-1937c beg:1288 end:1301 pic:3' ACCCCCGAGAAGGCCCTA 5'& |||| |.|||| &5' -----GCTC--CTGGGA- 3' Sh3rf1 mmu-miR-193star beg:645 end:665 pic:3' AGTAGAACGGGCGTTTCTGGGT 5'& ||| ||.| |||||.| &5' --ATCAA-CCTGA--AGACCTA 3' Sh3rf1 mmu-miR-1940 beg:1954 end:1976 pic:3' TTGACGAGGTGGAAGAGTCAGGAGGTA 5'& .|..|||| || |.|||||| &5' -----TTTTACCTG-TCTTTTCTCCAT 3' Sh3rf1 mmu-miR-1941-3p beg:1935 end:1947 pic:3' TACCCTCTATGACGATTCTAC 5'& |.||||||| &5' ------------GTTAAGATG 3' Sh3rf1 mmu-miR-1943 beg:482 end:503 pic:3' AGGTCCACGGGTCTAGGAGGGAA 5'& |. | ||||| |||||||| &5' -CTTGCTGCCC---TCCTCCCT- 3' Sh3rf1 mmu-miR-1944 beg:1599 end:1620 pic:3' TTAGTCTTGAACTGTAAGTC-GTGTCTC 5'& |||| ||| || |||||| &5' -----GAAC-TGAAG---AGTCACAGA- 3' Sh3rf1 mmu-miR-1948 beg:216 end:238 pic:3' GACATGCTCACGAGACGGATTT 5'& |||.| ||. ||.|||| &5' -TGTGCCT-TGTAATGTCTAA- 3' Sh3rf1 mmu-miR-1949 beg:2009 end:2025 pic:3' TTGATACGACTGTAGGACCATATC 5'& ||| |||||||||| &5' ------GCT----TCCTGGTATA- 3' Sh3rf1 mmu-miR-1952 beg:151 end:174 pic:3' GTCTTC--CTCCCA-CCTCT 5'& |||..| ||||| ||||. &5' CAGGGGCAGAGGGAAGGAGG 3' Sh3rf1 mmu-miR-1953 beg:532 end:547 pic:3' GTCTTCGGACTCTTGAAAGGGT 5'& ||| | |||.||| &5' -----GCC-----AGTTTTCCA 3' Sh3rf1 mmu-miR-1956 beg:656 end:675 pic:3' AGGCGACTGAGTCGGGACCTGA 5'& ||| .| ||||||.| &5' ------GACCTAATCCTGGATT 3' Sh3rf1 mmu-miR-1959 beg:456 end:475 pic:3' GAGGTGACTCGATGTAGGGG 5'& ||. || ||.||||.|| &5' ---CATAGA-CTGCATCTCC 3' Sh3rf1 mmu-miR-1959 beg:1383 end:1405 pic:3' GAGGTGACT-CGATGTAGGGG 5'& ||| .||| ||| | ..|| &5' -TCCTTTGATGCT-CTCTTCC 3' Sh3rf1 mmu-miR-1964 beg:2139 end:2158 pic:3' TTTCGGCCTCGGGTCTTCAGCC 5'& | .||.| . |||||||| &5' ---GGTGGGGATGAGAAGTCG- 3' Sh3rf1 mmu-miR-1967 beg:85 end:102 pic:3' CGTAGAAGAGGGGTCCTAGGAGT 5'& ||.|| ||||.||| &5' -------CTTCCA--GATCTTCA 3' Sh3rf1 mmu-miR-1968 beg:1399 end:1422 pic:3' TCAGGTGGTAGGAATTGTCGACGT 5'& |||| ||| ||||||. &5' --TCCAAT-TCCACCCCAGCTGT- 3' Sh3rf1 mmu-miR-1971 beg:1360 end:1378 pic:3' AGAGTCGGGTCGGAAATG 5'& || |||||| |.||| &5' -CTGAGCCCATCTTTT-- 3' Sh3rf1 mmu-miR-1982star beg:1232 end:1254 pic:3' GGAGGGGT-CCTGGGAGGGTT 5'& ||| || | .|||||||. &5' --TCCACATGTGTCCTCCCAG 3' Sh3rf1 mmu-miR-1983 beg:2055 end:2066 pic:3' TCTTTTGTACGAGGTCCACTC 5'& |.|||||| &5' ------------CTAGGTGA- 3' Sh3rf1 mmu-miR-200cstar beg:873 end:903 pic:3' GG-TTTGTGACGACC-----CATTCTGC 5'& || |.|||| |. ||.|||| &5' CCAAGACACAGTAAAAGTTTGTGAGAC- 3' Sh3rf1 mmu-miR-201 beg:1482 end:1503 pic:3' TTCTTGTTACG-GAATGACTCAT 5'& ||..| | ||| |||.||| &5' ----ACGGTTCTCTT-CTGGGTA 3' Sh3rf1 mmu-miR-204 beg:152 end:169 pic:3' TCCGTATCCTACTGTTTCCCTT 5'& ||| |.||.|||||| &5' ------AGG--GGCAGAGGGAA 3' Sh3rf1 mmu-miR-204 beg:1436 end:1456 pic:3' TC-CGTATCCTACTGTTTCCCTT 5'& || ||| ||.|.|||||| &5' AGAGCA------GATAGAGGGAA 3' Sh3rf1 mmu-miR-205 beg:1251 end:1271 pic:3' GTCTGAGGCCA-CCT-TACTTCCT 5'& ||| ||| .||||||. &5' -------CGGACGGATGTGAAGGG 3' Sh3rf1 mmu-miR-207 beg:577 end:599 pic:3' CTCCCTCCTCTCGGTCCTCTTCG 5'& .||||||.|||||.| ||| &5' -GGGGAGGGGAGCCGGCAGA--- 3' Sh3rf1 mmu-miR-211 beg:1436 end:1456 pic:3' TCCGTTTCCTACTGTTTCCCTT 5'& |.|| ||.|.|||||| &5' ----AGAGCA-GATAGAGGGAA 3' Sh3rf1 mmu-miR-211 beg:152 end:169 pic:3' TCCGTTTCCTACTGTTTCCCTT 5'& ||| |.||.|||||| &5' ------AGG--GGCAGAGGGAA 3' Sh3rf1 mmu-miR-2134 beg:863 end:883 pic:3' CGTGGGGCAAA--GGGTTCTG 5'& .||| |||||||| &5' ----TCCGCATGCCCCAAGAC 3' Sh3rf1 mmu-miR-2136 beg:958 end:978 pic:3' GTGTAGAGTCAGTTGTGGGTC 5'& ||.|.|| ||.||| &5' -ACGTTTCCACT--CATCCA- 3' Sh3rf1 mmu-miR-2140 beg:456 end:473 pic:3' TGGTGGTTCTAGACGTGGA 5'& ||. ||| |||||.|| &5' --CAT--AGA-CTGCATCT 3' Sh3rf1 mmu-miR-2146 beg:1955 end:1976 pic:3' GTGTACCTTGGGAAGAGGTG 5'& .|| || |..|||||||. &5' TACCTGT--CTTTTCTCCAT 3' Sh3rf1 mmu-miR-214star beg:1033 end:1060 pic:3' CGTGTCGTTCACATCT-GTC-CGT 5'& |||..|.. ||||| || ||| &5' GCATGGTGTGTGTATTTCATAGCA 3' Sh3rf1 mmu-miR-218 beg:1200 end:1216 pic:3' TGTACCAATCTAGTTCGTGTT 5'& ||||| |||||| &5' -----GTTAGCC--AGCACA- 3' Sh3rf1 mmu-miR-218 beg:33 end:57 pic:3' TGTACCAATCTAGTTCGTGTT 5'& ||.|| .||||||| &5' ACGTGTGACTAAAGAGCACAA 3' Sh3rf1 mmu-miR-221 beg:1644 end:1664 pic:3' CTTTGGGTC-GTCTGTTACATCGA 5'& || .| .|||||.||| &5' -------AGATACGTAATGTGGCT 3' Sh3rf1 mmu-miR-221 beg:100 end:123 pic:3' CTTTGGGTCGTCTGTTACATCGA 5'& .|||| |||||| .||| .|| &5' -GAACCGAGCAGAAGATG-GGC- 3' Sh3rf1 mmu-miR-223 beg:1815 end:1832 pic:3' ACCCCATAAACTG--TTTGACTGT 5'& || ||.|||||| &5' ----------GAAAAAAGCTGACA 3' Sh3rf1 mmu-miR-23a beg:809 end:827 pic:3' CCTTTAGGGACCGTTACACTA 5'& |.||.||| .||||| &5' ---AGTCTCTGT--GTGTGA- 3' Sh3rf1 mmu-miR-23a beg:1643 end:1662 pic:3' CCTTTAGGGACCGTTACACTA 5'& ||.|| |.||||||. &5' -GAGATAC---GTAATGTGG- 3' Sh3rf1 mmu-miR-23b beg:807 end:827 pic:3' CCATTAGGGACCGTTACACTA 5'& ||||.||.||| .||||| &5' GGTAGTCTCTGT--GTGTGA- 3' Sh3rf1 mmu-miR-26bstar beg:1425 end:1446 pic:3' CTCGGTTCATTACCTCTTGTCC 5'& .||. ||| ||||.||| &5' -GGCT-AGTCCT-GAGAGCAG- 3' Sh3rf1 mmu-miR-27astar beg:766 end:790 pic:3' ACGA--GTGTTCGTCGATTCG-GGA 5'& ||| |||||||||| ||| || &5' -GCTAGCACAAGCAGC--AGCGCC- 3' Sh3rf1 mmu-miR-2861 beg:1114 end:1136 pic:3' GGCGGGCGGCGGTC-CGGGG 5'& |.|||| |.||| ||||| &5' CTGCCC-CTGCCCCTGCCCC 3' Sh3rf1 mmu-miR-294star beg:2176 end:2191 pic:3' TCTATCCCGGAGGTAAAACTCA 5'& ||. |||||||| &5' ------GGTA---ATTTTGAG- 3' Sh3rf1 mmu-miR-297b-3p beg:1030 end:1051 pic:3' ATACCCATACACACATACATAT 5'& || | ||| ||||.||||| &5' --TGTGCATG-GTGTGTGTAT- 3' Sh3rf1 mmu-miR-297cstar beg:1030 end:1051 pic:3' ATACCCATACACACATACATAT 5'& || | ||| ||||.||||| &5' --TGTGCATG-GTGTGTGTAT- 3' Sh3rf1 mmu-miR-300star beg:82 end:103 pic:3' TGTTTCCTATTGGAG-AGAAGTT 5'& ||| || ||||||| &5' -----GGACTTCCAGATCTTCAA 3' Sh3rf1 mmu-miR-302bstar beg:911 end:935 pic:3' TCTTT-CGTAAGGGTACAATTTCA 5'& |||.| ||| |.|.||||||||| &5' AGAGATGCA--CTCGTGTTAAAGT 3' Sh3rf1 mmu-miR-30a beg:1161 end:1181 pic:3' GAAGGTCAGC--TCCTACAAATGT 5'& ||| || ||||||.| &5' ------GTCTTAAGTATGTTTGC- 3' Sh3rf1 mmu-miR-30astar beg:733 end:755 pic:3' CGACGT-TTGTAGGCTGACTTTC 5'& ||| ||| ..|||||.|| &5' ---GCACAACCATTGACTGGAA- 3' Sh3rf1 mmu-miR-30b beg:285 end:303 pic:3' TCGACTCACATCCT----ACAAATGT 5'& ||| |||||||| &5' -----------GGACAATTGTTTACA 3' Sh3rf1 mmu-miR-30c beg:285 end:303 pic:3' CGACTCTCACATCCT----ACAAATGT 5'& ||| |||||||| &5' ------------GGACAATTGTTTACA 3' Sh3rf1 mmu-miR-30c-2star beg:831 end:850 pic:3' TCTCATTTGTCGGAAGAGGGTC 5'& |.||| |. .||||| &5' ----TGAACCGTAG-TTCCCA- 3' Sh3rf1 mmu-miR-30c-2star beg:1392 end:1406 pic:3' TCTCATTTGTCGGAAGAGGGTC 5'& || |||.||| &5' ----------GCTCTCTTCCA- 3' Sh3rf1 mmu-miR-30e beg:1161 end:1181 pic:3' GAAGGTCAG--TTCCTACAAATGT 5'& ||| ||| ||||||.| &5' ------GTCTTAAGTATGTTTGC- 3' Sh3rf1 mmu-miR-30estar beg:735 end:755 pic:3' CGACATTTGTAGG---CTGACTTTC 5'& ||| || |||||.|| &5' -------ACAACCATTGACTGGAA- 3' Sh3rf1 mmu-miR-30estar beg:1581 end:1605 pic:3' CGACA-TTTGTAGGCTG-ACTTTC 5'& |||| |||.|| .||| |||| &5' GCTGGGAAATAT-TGACATGAA-- 3' Sh3rf1 mmu-miR-31star beg:1036 end:1060 pic:3' CTACCGTTATACAACC-GTATCGT 5'& ||||. .|.||| ||||||| &5' -ATGGT-GTGTGTATTTCATAGCA 3' Sh3rf1 mmu-miR-324-3p beg:1452 end:1471 pic:3' TC-GTCGTGGACCCCGTCACC 5'& || |||| |. ||.|||| &5' AGACAGC-CT---GGTAGTG- 3' Sh3rf1 mmu-miR-324-3p beg:567 end:587 pic:3' TCGTCGTGGACCCCGTCACC 5'& .| || |||||||| || || &5' GGAAGGACCTGGGG-AG-GG 3' Sh3rf1 mmu-miR-327 beg:1231 end:1250 pic:3' TAGGAGTACG-GGGAGTTCA 5'& |||| ||||. .|||| &5' ATCCACATGTGTCCTC---- 3' Sh3rf1 mmu-miR-342-3p beg:1832 end:1852 pic:3' TGCCCACGCTAA-AGACACACTCT 5'& || |||||||||| &5' ------GCTTTCATCTGTGTGAG- 3' Sh3rf1 mmu-miR-342-3p beg:166 end:189 pic:3' TGCCCACGCTAAAGACACACTCT 5'& || | |||||||.| &5' --GGAGGACACACCTGTGTGGG- 3' Sh3rf1 mmu-miR-343 beg:575 end:591 pic:3' AGACCCGTGTACTTCCCTCT 5'& ||||| ||.||||| &5' -CTGGG-----GAGGGGAG- 3' Sh3rf1 mmu-miR-344 beg:2037 end:2058 pic:3' TGTCAGTCCGAAACCGATCTAGT 5'& ||| |||| ||||||| &5' ----TCATCTGTTGG-TAGATCA 3' Sh3rf1 mmu-miR-3471 beg:656 end:677 pic:3' TTAC-GGAATGTCAACCTAGAGT 5'& | ||| |. |||||.|| &5' ---GACCTAATCC-TGGATTTC- 3' Sh3rf1 mmu-miR-3473 beg:1358 end:1380 pic:3' CCGACTC-GGTAGAGAGGT 5'& ||||||| ||||||.|..| &5' GGCTGAGCCCATCTTTTTA 3' Sh3rf1 mmu-miR-3473 beg:412 end:429 pic:3' CCGACTCGGTAGAGAGGT 5'& ||||.|. ||||||| &5' -GCTGGGT--TCTCTCC- 3' Sh3rf1 mmu-miR-3473 beg:182 end:201 pic:3' CCGACTC--GGTAGAGAGGT 5'& ||.| ||.||||||. &5' ---TGGGTTCCGTCTCTCT- 3' Sh3rf1 mmu-miR-3473 beg:1960 end:1975 pic:3' CCGACTCGGTAGAGAGGT 5'& |.| |.|||||| &5' ------GTCTTTTCTCCA 3' Sh3rf1 mmu-miR-3475 beg:120 end:136 pic:3' AAGTTTGGTACACGGAGGTCT 5'& ||| || ||||||| &5' -----ACC-TGA--CTCCAGA 3' Sh3rf1 mmu-miR-34cstar beg:891 end:912 pic:3' GGACCGACACACCA--ATCACTAA 5'& | .|||| | |.|||.| &5' ---GTTTGTGAGACAGTGGTGGT- 3' Sh3rf1 mmu-miR-361 beg:1994 end:2023 pic:3' CATGGGGACC----TCTAA-GACTATT 5'& |||.|| ||| || || |||.|| &5' GTATCCGTGGTAATAGCTTCCTGGTA- 3' Sh3rf1 mmu-miR-361 beg:190 end:212 pic:3' CATGGGGACCTCTAAGACTATT 5'& || |.|||| .|||||||. &5' GTCTCTCTGG--GTTCTGATG- 3' Sh3rf1 mmu-miR-376bstar beg:1366 end:1387 pic:3' ATTGGTATCTTCCTTATAGGTG 5'& |||| |||||||. &5' ---CCATCTTTTT-ATATCCAT 3' Sh3rf1 mmu-miR-376c beg:804 end:823 pic:3' TGCACTTTAAAGGAGATACAA 5'& |||. .||||.||| &5' --GTGGTAG--TCTCTGTGT- 3' Sh3rf1 mmu-miR-377 beg:1832 end:1851 pic:3' TGTTTTCAACGGAA----ACACACTA 5'& ||.|| ||||||| &5' ---------GCTTTCATCTGTGTGA- 3' Sh3rf1 mmu-miR-381 beg:1725 end:1740 pic:3' TGTCTCTCGAACGGGAACATAT 5'& |.| ||.||||.| &5' -------GTT--CCTTTGTGT- 3' Sh3rf1 mmu-miR-382star beg:815 end:831 pic:3' TTTTTCACAACAGGCACTTACT 5'& ||| .||||.||. &5' ---------TGTGTGTGAGTGG 3' Sh3rf1 mmu-miR-384-5p beg:285 end:303 pic:3' TGTAACGGATCCT--TAACAAATGT 5'& ||| |||||||||| &5' ----------GGACAATTGTTTACA 3' Sh3rf1 mmu-miR-384-5p beg:1160 end:1181 pic:3' TGTAACGGATCCTTAACAAATGT 5'& ||.|| |||||.| &5' ----TGTCTTAAGTATGTTTGC- 3' Sh3rf1 mmu-miR-421 beg:2028 end:2052 pic:3' CGCGGGTTAATTACAGACAACTA 5'& |.. |||||||.| &5' --GTTAAACTCTCATCTGTTGGT 3' Sh3rf1 mmu-miR-421 beg:417 end:439 pic:3' CGCGGGTTAATTACAGACAACTA 5'& |..| |||||||||| &5' --GTTCTCTCC-TGTCTGTTGA- 3' Sh3rf1 mmu-miR-423-3p beg:1349 end:1369 pic:3' TGACTCCCCGGAGTCTGGCTCGA 5'& | |||.|| |.|.|||| &5' ---GTAGGGTCT--GGCTGAGC- 3' Sh3rf1 mmu-miR-432 beg:587 end:606 pic:3' GACGGGTGACTAGATGAGGTTCT 5'& ||| .| ||||||.| &5' --GCCGGCAG----ACTCCAGG- 3' Sh3rf1 mmu-miR-466a-3p beg:1030 end:1051 pic:3' AGAATACACACG---CACATACATAT 5'& ||||| ||||.||||| &5' -------TGTGCATGGTGTGTGTAT- 3' Sh3rf1 mmu-miR-466b-3-3p beg:1030 end:1052 pic:3' AGAATACACACG---CACATACATAA 5'& ||||| ||||.|||||| &5' -------TGTGCATGGTGTGTGTATT 3' Sh3rf1 mmu-miR-466b-3p beg:1030 end:1051 pic:3' AGAATACACACG---CACATACATAT 5'& ||||| ||||.||||| &5' -------TGTGCATGGTGTGTGTAT- 3' Sh3rf1 mmu-miR-466c-3p beg:1030 end:1051 pic:3' AGAATACACACG---CACATACATAT 5'& ||||| ||||.||||| &5' -------TGTGCATGGTGTGTGTAT- 3' Sh3rf1 mmu-miR-466d-3p beg:1030 end:1051 pic:3' GATACACACGCACATACATAT 5'& ||.|| || ||||.||||| &5' CTGTGCATG-GTGTGTGTAT- 3' Sh3rf1 mmu-miR-466e-3p beg:1030 end:1051 pic:3' AGAATACACACG---CACATACATAT 5'& ||||| ||||.||||| &5' -------TGTGCATGGTGTGTGTAT- 3' Sh3rf1 mmu-miR-466f-3p beg:1030 end:1051 pic:3' CACACATACACACACACATAC 5'& |||| ||| |||||||||| &5' -TGTGCATG-GTGTGTGTAT- 3' Sh3rf1 mmu-miR-466i beg:808 end:830 pic:3' ATCACACATACACACACACATA 5'& |||| | |.|||||| ||| &5' TAGTCTCTGTGTGTGAGTG--- 3' Sh3rf1 mmu-miR-467c beg:1696 end:1719 pic:3' GTGTATATGTACGTGCGTGAAT 5'& .|.|||||.|| | |||| &5' TATATATATATAAAAACACT-- 3' Sh3rf1 mmu-miR-467g beg:1030 end:1051 pic:3' TATATACACA---CACATACATAT 5'& |||| ||||.||||| &5' -----TGTGCATGGTGTGTGTAT- 3' Sh3rf1 mmu-miR-488 beg:1822 end:1842 pic:3' CTGGTTCTTTGTCGGAAAGTT 5'& .| | ||| |||||| &5' -GCTGACAT-CAG-CTTTCA- 3' Sh3rf1 mmu-miR-488 beg:2154 end:2178 pic:3' CTGGTTCTTTGT-CGGAAAGTT 5'& ||| || ||||||.| &5' GACAATTTCTCATGCCTTTTA- 3' Sh3rf1 mmu-miR-489 beg:1832 end:1854 pic:3' CGACGGTATATACACCACAGTAA 5'& ||| .||| |.|||| |||. &5' GCTTTCATCTGTGTGA-GTCG-- 3' Sh3rf1 mmu-miR-491 beg:610 end:628 pic:3' GGAGTACCTTC--CCAAGGGGTGA 5'& | || || ||||||. &5' ------GTTAGTAGG-TCCCCAT- 3' Sh3rf1 mmu-miR-500 beg:1025 end:1047 pic:3' ACTTGGGAACGGGTCCACGTAA 5'& ||.||. ||| ||||..| &5' TGGACTG-TGCAT-GGTGTGT- 3' Sh3rf1 mmu-miR-504 beg:1345 end:1361 pic:3' CTATCTCACGTCTGGTCCCAGA 5'& || | .||||||| &5' -------TGTGG--TAGGGTCT 3' Sh3rf1 mmu-miR-539 beg:969 end:991 pic:3' TGTGTGGTTCCTATTAAAGAGG 5'& ||. ||| .|.|||||||| &5' -CAT-CCATC-GTGATTTCTCC 3' Sh3rf1 mmu-miR-592 beg:722 end:742 pic:3' TGTAGTAGCGTATAAC--TGTGTTA 5'& |||| .||||| &5' -------CGCAAACTAAAGCACAA- 3' Sh3rf1 mmu-miR-592 beg:865 end:888 pic:3' TGTAGTAGCGTATAA----CTGTGTTA 5'& |||||. ||||||.| &5' -------CGCATGCCCCAAGACACAGT 3' Sh3rf1 mmu-miR-652 beg:771 end:792 pic:3' GTGTTGGGATCACCGCGGTAA 5'& ||||| | || |||||.| &5' CACAAGC--AGCAGCGCCGT- 3' Sh3rf1 mmu-miR-664 beg:2092 end:2115 pic:3' ATCCGACCCCT--CATTTACTTAT 5'& .||| || |||.|||.||. &5' ----TTGGAGACAGTAGATGGATG 3' Sh3rf1 mmu-miR-665 beg:2002 end:2022 pic:3' TCCCTGGAGTCGGAGGACCA 5'& || .|||.||||||| &5' --GGTAA-TAGCTTCCTGGT 3' Sh3rf1 mmu-miR-669a beg:1094 end:1107 pic:3' TGTACTTGTACGTGTGTGTTGA 5'& ||.|||||.| &5' -----------CATACACAGC- 3' Sh3rf1 mmu-miR-669e beg:866 end:884 pic:3' TACTTGTACGTGTGTGTTCTGT 5'& .||||| | | ||||||| &5' ----GCATGC-C-C-CAAGACA 3' Sh3rf1 mmu-miR-669h-3p beg:1031 end:1057 pic:3' ACACGTA-CACACATATAC-GTAT 5'& |||||| ||||||.||| |||| &5' -GTGCATGGTGTGTGTATTTCATA 3' Sh3rf1 mmu-miR-669k beg:1032 end:1057 pic:3' AACGTA-CGCACATATAC-GTAT 5'& ||||| |.||||.||| |||| &5' -TGCATGGTGTGTGTATTTCATA 3' Sh3rf1 mmu-miR-669l beg:1094 end:1107 pic:3' TGTATATGTACGTGTGTGTTGA 5'& ||.|||||.| &5' -----------CATACACAGC- 3' Sh3rf1 mmu-miR-671-3p beg:1424 end:1444 pic:3' CCACC--TCGGGACTCTTGGCCT 5'& ||| ||.|||||||.| &5' --TGGCTAGTCCTGAGAGC---- 3' Sh3rf1 mmu-miR-672 beg:1094 end:1113 pic:3' AGTGTGTGTCATGTGGTTGGAGT 5'& ||.|||||| |.|.||| &5' -CATACACAG-----CGATCTC- 3' Sh3rf1 mmu-miR-673-3p beg:118 end:143 pic:3' CCACGTGTCTTGAG---TCGGGGCCT 5'& || |||| .|||| |||||||| &5' GG-GCACCTGACTCCAGAGCCCCGG- 3' Sh3rf1 mmu-miR-684 beg:1442 end:1459 pic:3' AACTGAACTTCCCTTTTGA 5'& ||. .||||||.|| &5' --GATA--GAGGGAAGAC- 3' Sh3rf1 mmu-miR-686 beg:1486 end:1512 pic:3' AGAAGTGGCAGACCC-----TTCGTTA 5'& ||| |. |||||| .||.|| &5' --TTCTCT-TCTGGGTAAGAGAGTAA- 3' Sh3rf1 mmu-miR-692 beg:396 end:414 pic:3' CTCACTCCGCGAGTTTCTCTA 5'& ||| .| |.||.|||| &5' ---TGA--TGGTTAAGGAGA- 3' Sh3rf1 mmu-miR-692 beg:787 end:805 pic:3' CTCACTCCGCGAGTTTCTCTA 5'& |||.| |. .||||| &5' --GTGGGAAGT---GAGAGA- 3' Sh3rf1 mmu-miR-693-5p beg:1649 end:1664 pic:3' CTTTTGAAAGCC-TACACCGAC 5'& || |||||||| &5' ---------CGTAATGTGGCT- 3' Sh3rf1 mmu-miR-694 beg:1962 end:1984 pic:3' GAAGTCCGTTGTAAAAGTC 5'& |||. | |.|||||||| &5' CTTTTCTCCATATTTTCAG 3' Sh3rf1 mmu-miR-698 beg:153 end:175 pic:3' TCCC--TTCCTTTGCTCTTAC 5'& .||| .|||.|| |||.| &5' GGGGCAGAGGGAAGGAGGA-- 3' Sh3rf1 mmu-miR-705 beg:1116 end:1140 pic:3' ACGGG--TGGGG-TGGAGGGTGG 5'& |||| .|||| .|| |||||| &5' -GCCCCTGCCCCTGCC-CCCACC 3' Sh3rf1 mmu-miR-706 beg:675 end:694 pic:3' AAAAAACTCTGTCCCAAAGAGA 5'& |||||| ||||||.|| &5' -TTTTTGT----GGGTTTTTC- 3' Sh3rf1 mmu-miR-712 beg:1251 end:1271 pic:3' CCATGGCGGGCC--CACTTCCTC 5'& || ||| |||||||. &5' -----CGGACGGATGTGAAGGG- 3' Sh3rf1 mmu-miR-713 beg:1037 end:1060 pic:3' CGACACACG-GAAGTCACGT 5'& | ||||||. .|||| ||| &5' GGTGTGTGTATTTCATAGCA 3' Sh3rf1 mmu-miR-741 beg:1093 end:1115 pic:3' AGATGTATCTTACCG-TAGAGAGT 5'& ||||| || ||||||. &5' ---ACATACACA-GCGATCTCTT- 3' Sh3rf1 mmu-miR-742 beg:812 end:835 pic:3' AAATGGGT--CGTAC-CACCGAAAG 5'& |.| |..|| |||||||| &5' ----CTCTGTGTGTGAGTGGCTTT- 3' Sh3rf1 mmu-miR-743a beg:244 end:263 pic:3' AGATGAGTCGAACCACAGAAAG 5'& ||| |||||||. &5' ------CAGATAAATGTCTTTT 3' Sh3rf1 mmu-miR-743b-3p beg:244 end:263 pic:3' AGATAAGTCGTACTACAGAAAG 5'& ||| ||||||||. &5' ------CAGATAAATGTCTTTT 3' Sh3rf1 mmu-miR-758 beg:1598 end:1619 pic:3' ATCACCTGG--TC-CAGTGTTT 5'& || ||. || ||||||.| &5' ---TGAACTGAAGAGTCACAGA 3' Sh3rf1 mmu-miR-760 beg:119 end:139 pic:3' AGGGGTGT-CTG-GGTCTCGGC 5'& ||| ||| |||||||| &5' ----CACCTGACTCCAGAGCC- 3' Sh3rf1 mmu-miR-761 beg:2028 end:2050 pic:3' ACACAGTCAAAGTG-GGACGACG 5'& ||.| || .|||.|| &5' ---GTTAAACTCTCATCTGTTG- 3' Sh3rf1 mmu-miR-764-5p beg:1317 end:1338 pic:3' TCCTC-CTGTACACTCGTGG 5'& .|||| |.| |||| ||| &5' GGGAGTGGC-TGTGCCCAC- 3' Sh3rf1 mmu-miR-767 beg:1026 end:1045 pic:3' ACGAGTCTGTTG-GTACCACGT 5'& .||| |||||||. &5' -----GGACTGTGCATGGTGT- 3' Sh3rf1 mmu-miR-7a beg:1392 end:1406 pic:3' TGTTGTTTTAGTGATCAGAAGGT 5'& .|| ||||||| &5' -----------GCTC-TCTTCCA 3' Sh3rf1 mmu-miR-7a beg:523 end:547 pic:3' TGTTGTTTTAGTGATCAGAAGGT 5'& .|||||| ..| |||.||||| &5' --GACAAAAATGCCAGTTTTCCA 3' Sh3rf1 mmu-miR-7b beg:1392 end:1406 pic:3' TGTTGTTTTAGTGTTCAGAAGGT 5'& .| ||||||| &5' -----------GCTC-TCTTCCA 3' Sh3rf1 mmu-miR-7b beg:525 end:547 pic:3' TGTTGTTTTAGTGTTCAGAAGGT 5'& .|||||| ..| |||.||||| &5' --GACAAAAATGCCAGTTTTCCA 3' Sh3rf1 mmu-miR-872star beg:826 end:847 pic:3' TCCTCCGATGACGT--TATCAAGT 5'& |||| .|| .|||||| &5' ----GGCT-TTGAACCGTAGTTC- 3' Sh3rf1 mmu-miR-875-3p beg:1966 end:1984 pic:3' GTATCGGAGTCATAAAAGTCC 5'& .||| ||||||||| &5' -----TCTCCATATTTTCAG- 3' Sh3rf1 mmu-miR-876-3p beg:2047 end:2061 pic:3' ACTTAATGAAACATTTGGTGAT 5'& |||.|.||||| &5' -----------GTAGATCACTA 3' Sh3rf1 mmu-miR-876-3p beg:1271 end:1290 pic:3' ACTTAATGAAACA-TTTGGTGAT 5'& .|| || |.|||||| &5' ------GCTCTGGGAGACCACT- 3' Sh3rf1 mmu-miR-877star beg:154 end:177 pic:3' ACCCTCCTCCCTCTTCTCCTGT 5'& ||| |||||| |.||||||| &5' -GGGCAGAGGGA-AGGAGGACA 3' Sh3rf1 mmu-miR-881star beg:179 end:202 pic:3' TCTACACTGACAATAGAGAGAC 5'& .||||. | .|||||||| &5' --GTGTGGGTTCCGTCTCTCTG 3' Sh3rf1 mmu-miR-882 beg:181 end:201 pic:3' TGATTACGCGATTGAGAGAGGA 5'& .|| |.| ||||||. &5' ----GTGGGTTCCGTCTCTCT- 3' Sh3rf1 mmu-miR-9 beg:27 end:51 pic:3' AGTATGTCGATCTATTGGTTTCT 5'& ||| || | .|.||.||||| &5' TCACACCACGT-GTGACTAAAGA 3' Sh3rf1 mmu-miR-185 beg:412 end:429 pic:3' AGTCCTTGACGGA--AAGAGAGGT 5'& ||. |||||||| &5' ---------GCTGGGTTCTCTCC- 3' Sh3rf1 mcmv-miR-m01-2 beg:1088 end:1116 pic:3' TGGCAAGGT---TGG---GCTAAGAGAAG 5'& |||. || ||| ||||||| &5' ---GTTTAACATACACAGCGA-TCTCTTC 3' Sh3rf1 mcmv-miR-m01-2 beg:1379 end:1404 pic:3' TGGCAAGGTTGGG--CTA--AGAGAAG 5'& |||| ||. ||| ||||||| &5' -----TCCATCCTTTGATGCTCTCTTC 3' Sh3rf1 mcmv-miR-m01-2 beg:1472 end:1497 pic:3' TGG--CAAGGTTGGGCTAAGAGAAG 5'& ||| ||||.| ||.|||||||| &5' ACCTTGTTCTA---CGGTTCTCTTC 3' Sh3rf1 mmu-miR-455 beg:1019 end:1036 pic:3' CACATATACGGGCACCTGACG 5'& .|| . ||||||||. &5' ------GTGGT-GTGGACTGT 3' Sh3rf1 mmu-miR-329 beg:1021 end:1047 pic:3' TTTTTCCA-ATC-GAC-----CCACACAA 5'& ||| |.| ||| ||||||| &5' -----GGTGTGGACTGTGCATGGTGTGT- 3' Sh3rf1 mmu-miR-466i beg:1021 end:1049 pic:3' ATCACACAT-ACACA---CACACATA 5'& |.||||| |||| ||||||.| &5' TGGTGTGGACTGTGCATGGTGTGTGT 3' Sh3rf1 mmu-miR-742star beg:1831 end:1853 pic:3' ACTAATCGTT----GGTACACTCAT 5'& ||| |..||||||| &5' -----AGCTTTCATCTGTGTGAGT- 3' Sh3rf1 mmu-miR-342-3p beg:2058 end:2079 pic:3' TGCCCACGCTAAAGACACACTCT 5'& |||| ||||||.| &5' ---GGTGATATAA-TGTGTGGG- 3' Sh3rf1 mmu-miR-467g beg:2062 end:2087 pic:3' TATA-TACACACACAT-ACATAT 5'& |||| ||||||| || ||||| &5' ATATAATGTGTGGGTTTTGTAT- 3' Sh3rf1 mmu-miR-342-3p beg:668 end:688 pic:3' TGCCCACGCTAAAGAC---ACACTCT 5'& ||||||| ||||.| &5' --------GATTTCTTTTTTGTGGG- 3' Sh3rf1 mmu-miR-742star beg:668 end:689 pic:3' ACTAATCGTTGGTACACTCAT 5'& |||| | . ||||.|| &5' -GATTT-CTTTTTTGTGGGT- 3' Sh3rf1 mmu-miR-329 beg:799 end:825 pic:3' TTTTTC-CAATC-GACCCACACAA 5'& |.|||| | ||| || |||||| &5' AGAAAGTGGTAGTCTCTGTGTGT- 3' Sh3rf1 mmu-miR-377 beg:800 end:827 pic:3' TGTTTTCAA---CGGAA--ACACACTA 5'& .||||| |.|| ||||||| &5' --GAAAGTGGTAGTCTCTGTGTGTGA- 3' Sh3rf1 mmu-miR-742star beg:800 end:830 pic:3' ACTA--ATCGTTGG-----TACACTCAT 5'& || |.|.| | .|||||||. &5' -GAAAGTGGTAGTCTCTGTGTGTGAGTG 3' Sh3rf1 mmu-miR-690 beg:805 end:835 pic:3' AAACCA----------ACACTCGGATCGGAAA 5'& |||| ||||||. .||.|| &5' --TGGTAGTCTCTGTGTGTGAGT--GGCTTT- 3'

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 Sh3rf1 mmu-miR-124a 220 227 --CCGUA--AGUGG-------------------CGCACGGAAU ||: || |: |:|||||||: UGGGUUCCGUCUCUCUGGGUUCUGAUGUGUAAAGUGUGCCUUGU Sh3rf1 mmu-miR-128a 953 960 UUUUC----------------UCUGGCCAA-----GUGACACU ||:|:| |||||||| UGCACUCGUGUUAAAGUCAAAAGGCUGUAAGAAAACACUGUGAA Sh3rf1 mmu-miR-128b 953 960 CUUUC----------------UCUGGCCAA-----GUGACACU ||:|:| |||||||| UGCACUCGUGUUAAAGUCAAAAGGCUGUAAGAAAACACUGUGAA Sh3rf1 mmu-miR-132 1299 1306 G------------------CUGGUAC-CGACA--UCUGACAAU ||||| ||| :||||||| UGAAGGGCGAGCUCUGGGAGACCACUCGCUCCUGGGACUGUUC Sh3rf1 mmu-miR-185 422 429 -----------------------CUUGACGGA--AAGAGAGGU ||: ||: |||||||| UAAUUUAUGAAAUGAUGGUUAAGGAGAAGCUGGGUUCUCUCCU Sh3rf1 mmu-miR-207 409 416 CUCCCUC-------------------CUCUCGG-UCCUCUUCG || :|:: ||||||||| UUUUAGAAAAUAUUAAUUUAUGAAAUGAUGGUUAAGGAGAAGCU Sh3rf1 mmu-miR-212 1299 1306 ----CCGGCACU-GAC-----------------CUCUGACAAU || || | ||| |:||||||| UGAAGGGCGAGCUCUGGGAGACCACUCGCUCCUGGGACUGUUC Sh3rf1 mmu-miR-24 1363 1370 GACAAGGA---------------------CGACUUGACUCGGU |||| || |: ::||||||| CUGUGCCCACACCUUACAAUUGUGGUAGGGUCUGGCUGAGCCC Sh3rf1 mmu-miR-27a 954 961 CGCC-----------------UUGAA--UCG---GUGACACUU ::|| || ||||||||| GCACUCGUGUUAAAGUCAAAAGGCUGUAAGAAAACACUGUGAAC Sh3rf1 mmu-miR-27b 954 961 CGUC-----------------UUGAA--UCG---GUGACACUU ::|| || ||||||||| GCACUCGUGUUAAAGUCAAAAGGCUGUAAGAAAACACUGUGAAC Sh3rf1 mmu-miR-291a-5p 636 643 ---UC-UCUCC-CGG----------------AGGUGAAACUAC :| ||||| |:: || ||||||| CCAGGUAGAGGAGUUAGUAGGUCCCCAUCUGUCUGCUUUGAUC Sh3rf1 mmu-miR-291a-5p 1388 1395 UCUCUCCCGG----------------------AGGU--GAAACUAC ||||:| |||| |||||||| U---AGGGUCUGGCUGAGCCCAUCUUUUUAUAUCCAUCCUUUGAUGC Sh3rf1 mmu-miR-291b-5p 636 643 C-----UCUCC-CGG----------------AGGUGAAACUAG ||||| |:: || |||||||| CCAGGUAGAGGAGUUAGUAGGUCCCCAUCUGUCUGCUUUGAUCA Sh3rf1 mmu-miR-302b* 927 934 ---------------------UCUUU-CGUAAGGGUACAAUUUCA |||:| ||| |:|:||||||||| GUUUGUGAGACAGUGGUGGUAAGAGAUGCA--CUCGUGUUAAAGUC Sh3rf1 mmu-miR-323 2068 2075 UCU-------------CCAGCUGG-----CAC---AUUACACG ||| ||:| ||| |||||||: UAAACUCUCAUCUGUUGGUAGAUCACUAGGUGAUAUAAUGUGUG Sh3rf1 mmu-miR-329 1040 1047 UUUUU--------------CCA-AUC-GAC-----CCACACAA ||| |:| ||| ||||||| GAUACCGGAUUCCCACAGUGGUGUGGACUGUGCAUGGUGUGUG Sh3rf1 mmu-miR-330 634 641 AGAGA-------------CGUCCGGG-----AC--ACGAAACG |:|||:|| || ||||||| CUCCAGGUAGAGGAGUUAGUAGGUCCCCAUCUGUCUGCUUUGA Sh3rf1 mmu-miR-331 153 160 AAGAU------------------CCUAUCC----GGGUCCCCG || || ||||||||| UGGGCACCUGACUCCAGAGCCCCGGCCUGGUUACCCCAGGGGCA Sh3rf1 mmu-miR-342 821 828 CU---GCCCA-CGCUAA---------------AGACACACUCU :||| |:|| | |||||||| CGCCGUGGGAAGUGAGAGAAAGUGGUAGUCUCUGUGUGUGAGU Sh3rf1 mmu-miR-342 1845 1852 ------------------CUGCCCACGCUAA-AGACACACUCU ||| || |||||||||| UUUAGUUAGAAAAAAGCUGACAUCAGCUUUCAUCUGUGUGAGU Sh3rf1 mmu-miR-346 593 600 UC--------------------UCCGUCCGUGAGCCCGUCUGU :|| ||| : | ||||||| GAAUCAGUACCGGGAAGGACCUGGGGAGGGGAGCCGGCAGACU Sh3rf1 mmu-miR-377 820 827 UG----------------UUUUCAA---CGGAA--ACACACUA :||||| |:|| ||||||| GCGCCGUGGGAAGUGAGAGAAAGUGGUAGUCUCUGUGUGUGAG Sh3rf1 mmu-miR-412 1190 1197 UGC---------------------CGAUCACCUGGUCCACUUCA ||| :|:||||||| GACCGAGAUGUCUUAAGUAUGUUUGCUCCCUC-UCGGGUGAAGG Sh3rf1 mmu-miR-423 105 112 -----------GACUCCCCGGAG----------UC-UGGCUCGA ||| || |:|| || ||||||| AAAGAGCACAUCUGUGGA-CUUCCAGAUCUUCAAGAACCGAGCA Sh3rf1 mmu-miR-489 1863 1870 -------CGACGGUAUAUACAC-------------CACAGUAA ||| :||| |:|||| ||||||| GACAUCAGCUUUCAUCUGUGUGAGUCGACACCAAUGUGUCAUA Sh3rf1 mmu-miR-539 983 990 ---------------------UGUGU-GGUUCCUAUUAAAGAGG || || ||| :|:|||||||| GAAAACACUGUGAACGUUUCCACUCAUCCAUC-GUGAUUUCUCCG Sh3rf1 mmu-miR-665 1292 1299 AU--------------------UCC-CUGGAGUCGGAGGACCA :|| |||| | ||||||| ACGGAUGUGAAGGGCGAGCUCUGGGAGACCACUCGCUCCUGGG Sh3rf1 mmu-miR-678 1156 1163 -----------------------GGAGGUCAGGAACGUGGCUCUG || ||| || |||||||: CCCUGCCCCUGCCCCCACCACCACCACCACUACUG--ACCGAGAUG Sh3rf1 mmu-miR-692 1643 1650 --CUCA----CU--CCG-------------C-GAGUUUCUCUA |||| || ||| | ||:|||||||| AAGAGUCACAGAAUGGCAAGAGAUCCCAUUGUCUUAAAGAGAUA Sh3rf1 mmu-miR-696 1197 1204 --------------------GGGU--GUCG---UUCGUGUGCG ||| |:| |:|||||||: AUGUCUUAAGUAUGUUUGCUCCCUCUCGGGUGAAGGCACACGUU Sh3rf1 mmu-miR-742 828 835 AAAU------------------GGGU--CGUAC-CACCGAAAG |:| |::|| |||||||| GGAAGUGAGAGAAAGUGGUAGUCUCUGUGUGUGAGUGGCUUUG Sh3rf1 mmu-miR-763 1414 1421 C-----------------------------GGUGACCAAGAAGGGUCGACC |||| |||||||| AUAUCCAUCCUUUGAUGCUCUCUUCCAAUUCCAC--------CCCAGCUGU Sh3rf1 mmu-miR-124a 208 227 CCGUAAGUGGCGCACGGAAu | ::| :| |:||||||| GATGTGTAAAGTGTGCCTTg Sh3rf1 mmu-miR-128a 934 960 uuUUCUCUGGC---C--AAGUGACACU || ||:|:| | |||||||| tcAAAAGGCTGTAAGAAAACACTGTGA Sh3rf1 mmu-miR-128b 934 960 cuUUCUCUGGC---C--AAGUGACACU || ||:|:| | |||||||| tcAAAAGGCTGTAAGAAAACACTGTGA Sh3rf1 mmu-miR-132 1282 1306 gCUGGU-ACC---GACAUCUGACAAu ||||| | | ||| :||||||| aGACCACTCGCTCCTG-GGACTGTTc Sh3rf1 mmu-miR-185 412 429 CUU-GACGGAAAGAGAGGu ||| ||| |||||||| GAAGCTG-GGTTCTCTCCt Sh3rf1 mmu-miR-207 393 416 cucccUCCUCUCGG-UCCUCUUCG | || :|:: ||||||||| atgaaATGATGGTTAAGGAGAAGC Sh3rf1 mmu-miR-212 1287 1306 ccgGCACUGACCUCUGACAAu || |||| ||||||| actCGCTCCTGG-GACTGTTc Sh3rf1 mmu-miR-24 1350 1370 gacaaggacGACUUGACUCGGu ||| :||||||| tggtagggtCTG-GCTGAGCCc Sh3rf1 mmu-miR-27a 941 961 CGCCUUGAAUCGGUGACACUU || | | | ||||||||| GCTGTAAGAAAACACTGTGAA Sh3rf1 mmu-miR-27b 941 961 CGUCUUGAAUCGGUGACACUU || | | | ||||||||| GCTGTAAGAAAACACTGTGAA Sh3rf1 mmu-miR-291a-5p 614 643 ucUC-UCCCGG-------AGGUGAAACUAc || ||| || ||::||||||| ttAGTAGGTCCCCATCTGTCTGCTTTGATc Sh3rf1 mmu-miR-291a-5p 1372 1395 ucucucccggAGGU--GAAACUAC |||| |||||||| tctttttataTCCATCCTTTGATG Sh3rf1 mmu-miR-291b-5p 615 643 cUC-UCCCGG-------AGGUGAAACUAG || ||| || ||::|||||||| tAGTAGGTCCCCATCTGTCTGCTTTGATC Sh3rf1 mmu-miR-302b* 913 934 UCUUU-CGUAAGGGUACAAUUUCA |||:| ||| |:|:||||||||| AGAGATGCA--CTCGTGTTAAAGT Sh3rf1 mmu-miR-323 2046 2075 ucuCCAGCUGG-----CAC---AUUACACg ||| ||:| ||| ||||||| gttGGTAGATCACTAGGTGATATAATGTGt Sh3rf1 mmu-miR-329 1019 1047 UUUUUCCA-AUC-GAC-----CCACACAa | |: ||| |:| ||| ||||||| ACAGTGGTGTGGACTGTGCATGGTGTGTg Sh3rf1 mmu-miR-330 612 641 agAGACGUCC---GG--GAC--ACGAAACg |: |:||| || ||| ||||||| agTTAGTAGGTCCCCATCTGTCTGCTTTGa Sh3rf1 mmu-miR-331 142 160 aaGAUCCUAUCCGGGUCCCCG || || || ||||||||| gcCT-GGTTA-CCCCAGGGGC Sh3rf1 mmu-miR-342 1828 1852 CUGCCCACGCUA-AAGACACACUCu ||| || | |||||||||| GACATCAGCTTTCATCTGTGTGAGt Sh3rf1 mmu-miR-342 803 828 CUGCCCACGCUAAAG--ACACACUCu || | |: :| || |||||||| GAAAGTGGTAGTCTCTGTGTGTGAGt Sh3rf1 mmu-miR-346 579 600 uCUCCGUCCGUGAGCCCGUCUGu |:|| ||| : | ||||||| tGGGG-AGGGGAGCCGGCAGACt Sh3rf1 mmu-miR-377 801 827 uguUUUCAAC-----GGAAACACACUa ||||| | :|| ||||||| gagAAAGTGGTAGTCTCTGTGTGTGAg Sh3rf1 mmu-miR-412 1175 1197 ugccgaucaccugGUCCACUUCa |:||||||| gtttgctccctctCGGGTGAAGg Sh3rf1 mmu-miR-423 89 112 gacuccccGGAG-UC-UGGCUCGa |:|| || ||||||| ttccagatCTTCAAGAACCGAGCa Sh3rf1 mmu-miR-489 1835 1870 CGACGGUAUAUACAC-------------CACAGUAa ||| :||| |:|||| ||||||| GCTTTCATCTGTGTGAGTCGACACCAATGTGTCATa Sh3rf1 mmu-miR-539 969 990 UGUGUGGUUCCUAUUAAAGAGG || ||:| | :|:|||||||| ACTCATCCATCGTGATTTCTCC Sh3rf1 mmu-miR-665 1278 1299 AUUCCCUGGAGUCGGAGGACCa |::| |||| | ||||||| TGGGAGACCACTCGCTCCTGGg Sh3rf1 mmu-miR-665 1294 1322 auuCCCUG--GAGUCG----GAG-GACCa ||||| :||:|| ||: |||| cctGGGACTGTTCGGCAAGGCTTGCTGGg Sh3rf1 mmu-miR-678 1144 1163 GGAGGUCAGGAACGUGGCUCUg || ||| | | || ||||||| CCACCACTAC-TG-ACCGAGAt Sh3rf1 mmu-miR-692 1625 1650 cUCACUCCG----C-GAGUUUCUCUA || || | | ||:|||||||| aAGAGATCCCATTGTCTTAAAGAGAT Sh3rf1 mmu-miR-696 1184 1204 GGGUGU---CGUUCGUGUGCg |:| |: | |:||||||| CTCTCGGGTGAAGGCACACGt Sh3rf1 mmu-miR-742 811 835 aaauGGGUCGUAC---CACCGAAAg |:| |::|| |||||||| tagtCTCTGTGTGTGAGTGGCTTTg Sh3rf1 mmu-miR-763 1402 1421 cGGUGACCAAGAAGGGUCGACc ||| | | | |||||||| tCCAAT--TCCACCCCAGCTGt

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Sh3rf1 RAID00027730 mmu-miR-449a-5p miRNA MIMAT0001542 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID00036198 mmu-miR-449b miRNA MIMAT0005447 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID00102892 mmu-miR-7087-3p miRNA MIMAT0028081 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID00108103 mmu-miR-6947-5p miRNA MIMAT0027794 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID00108110 mmu-miR-340-5p miRNA MIMAT0004651 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID00121863 mmu-miR-194-5p miRNA MIMAT0000224 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID00136913 mmu-miR-425-5p miRNA MIMAT0004750 Sh3rf1 mRNA 59009 Prediction 0.2202 Sh3rf1 RAID00153260 mmu-miR-149-5p miRNA MIMAT0000159 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID00200630 mmu-miR-3094-3p miRNA MIMAT0014910 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID00238218 mmu-miR-6911-3p miRNA MIMAT0027723 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID00282184 mmu-miR-186-5p miRNA MIMAT0000215 Sh3rf1 mRNA 59009 Prediction 0.2381 Sh3rf1 RAID00300501 mmu-miR-26b-5p miRNA MIMAT0000534 Sh3rf1 mRNA 59009 Prediction 0.2202 Sh3rf1 RAID00380918 mmu-miR-7002-3p miRNA MIMAT0027907 Sh3rf1 mRNA 59009 Prediction 0.2202 Sh3rf1 RAID00416903 mmu-miR-148b-3p miRNA MIMAT0000580 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID00421988 mmu-miR-17-5p miRNA MIMAT0000649 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID00431705 mmu-miR-384-5p miRNA MIMAT0004745 Sh3rf1 mRNA 59009 CLIP-seq//Prediction 0.6592 Sh3rf1 RAID00481778 mmu-miR-329-3p miRNA MIMAT0000567 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID00517590 mmu-miR-146b-5p miRNA MIMAT0003475 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID00542865 mmu-miR-224-5p miRNA MIMAT0000671 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID00555377 mmu-miR-383-5p miRNA MIMAT0000748 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID00556173 mmu-miR-505-3p miRNA MIMAT0003513 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID00575757 mmu-miR-669b-3p miRNA MIMAT0017250 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID00619415 mmu-miR-342-3p miRNA MIMAT0000590 Sh3rf1 mRNA 59009 Prediction 0.2381 Sh3rf1 RAID00673754 mmu-miR-145a-5p miRNA MIMAT0000157 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID00675790 mmu-miR-136-5p miRNA MIMAT0000148 Sh3rf1 mRNA 59009 CLIP-seq//Prediction 0.6308 Sh3rf1 RAID00776001 mmu-miR-377-3p miRNA MIMAT0000741 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID00803657 mmu-miR-499-5p miRNA MIMAT0003482 Sh3rf1 mRNA 59009 Prediction 0.2202 Sh3rf1 RAID00841489 mmu-miR-1966-5p miRNA MIMAT0009439 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID00843497 mmu-miR-101a-3p miRNA MIMAT0000133 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID00846776 mmu-miR-421-3p miRNA MIMAT0004869 Sh3rf1 mRNA 59009 CLIP-seq//Prediction 0.6559 Sh3rf1 RAID00872871 mmu-miR-93-5p miRNA MIMAT0000540 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID00875100 mmu-miR-290b-5p miRNA MIMAT0029900 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID00883959 mmu-miR-134-5p miRNA MIMAT0000146 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID00906710 mmu-miR-146a-5p miRNA MIMAT0000158 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID00910377 mmu-miR-669d-2-3p miRNA MIMAT0014884 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID00932898 mmu-miR-152-3p miRNA MIMAT0000162 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID00942324 mmu-miR-30c-5p miRNA MIMAT0000514 Sh3rf1 mRNA 59009 CLIP-seq//Prediction 0.6559 Sh3rf1 RAID00957592 mmu-miR-129b-3p miRNA MIMAT0029863 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID00964913 mmu-miR-590-3p miRNA MIMAT0004896 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID00968491 mmu-miR-881-3p miRNA MIMAT0004846 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID00974475 mmu-miR-181d-5p miRNA MIMAT0004324 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID00984994 mmu-miR-544-5p miRNA MIMAT0017282 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID00994046 mmu-miR-7119-3p miRNA MIMAT0028136 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID01089482 mmu-miR-362-3p miRNA MIMAT0004684 Sh3rf1 mRNA 59009 Prediction 0.2202 Sh3rf1 RAID01108389 mmu-miR-181a-5p miRNA MIMAT0000210 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID01118805 mmu-miR-20a-5p miRNA MIMAT0000529 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID01190566 mmu-miR-216b-5p miRNA MIMAT0003729 Sh3rf1 mRNA 59009 Prediction 0.2202 Sh3rf1 RAID01239789 mmu-miR-10a-5p miRNA MIMAT0000648 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID01268156 mmu-miR-30b-5p miRNA MIMAT0000130 Sh3rf1 mRNA 59009 CLIP-seq//Prediction 0.6559 Sh3rf1 RAID01275862 mmu-miR-141-3p miRNA MIMAT0000153 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID01291807 mmu-miR-344f-3p miRNA MIMAT0014932 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID01315570 mmu-miR-467b-3p miRNA MIMAT0003478 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID01341409 mmu-miR-34b-5p miRNA MIMAT0000382 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID01377054 mmu-miR-296-3p miRNA MIMAT0004576 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID01379555 mmu-miR-6931-5p miRNA MIMAT0027762 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID01453384 mmu-miR-6413 miRNA MIMAT0025166 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID01470402 mmu-miR-223-3p miRNA MIMAT0000665 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID01493650 mmu-miR-106a-5p miRNA MIMAT0000385 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID01500012 mmu-miR-467c-3p miRNA MIMAT0017275 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID01523318 mmu-miR-467d-3p miRNA MIMAT0004887 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID01563003 mmu-miR-30a-5p miRNA MIMAT0000128 Sh3rf1 mRNA 59009 CLIP-seq//Prediction 0.6559 Sh3rf1 RAID01613161 mmu-miR-129-5p miRNA MIMAT0000209 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID01616733 mmu-miR-101b-3p miRNA MIMAT0000616 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID01717002 mmu-miR-330-5p miRNA MIMAT0004642 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID01727699 mmu-miR-128-3p miRNA MIMAT0000140 Sh3rf1 mRNA 59009 Prediction 0.2202 Sh3rf1 RAID01759065 mmu-miR-7026-3p miRNA MIMAT0027957 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID01781601 mmu-miR-743a-3p miRNA MIMAT0004238 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID01791547 mmu-miR-34a-5p miRNA MIMAT0000542 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID01798365 mmu-miR-125a-3p miRNA MIMAT0004528 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID01888030 mmu-miR-672-3p miRNA MIMAT0017241 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID01914497 mmu-miR-6343 miRNA MIMAT0025086 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID01971042 mmu-miR-5098 miRNA MIMAT0020605 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID01976941 mmu-miR-339-5p miRNA MIMAT0000584 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID02033299 mmu-miR-34c-5p miRNA MIMAT0000381 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID02060389 mmu-miR-150-5p miRNA MIMAT0000160 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID02067180 mmu-miR-320-3p miRNA MIMAT0000666 Sh3rf1 mRNA 59009 Prediction 0.2202 Sh3rf1 RAID02131000 mmu-miR-873a-5p miRNA MIMAT0004936 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID02148095 mmu-miR-10b-5p miRNA MIMAT0000208 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID02192034 mmu-miR-27b-3p miRNA MIMAT0000126 Sh3rf1 mRNA 59009 Prediction 0.2381 Sh3rf1 RAID02254109 mmu-miR-1a-3p miRNA MIMAT0000123 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID02273762 mmu-miR-384-3p miRNA MIMAT0001076 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID02310558 mmu-miR-322-5p miRNA MIMAT0000548 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID02360538 mmu-miR-467e-3p miRNA MIMAT0005294 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID02413821 mmu-miR-497a-5p miRNA MIMAT0003453 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID02434373 mmu-miR-26a-5p miRNA MIMAT0000533 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID02443060 mmu-miR-185-5p miRNA MIMAT0000214 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID02509662 mmu-miR-200a-3p miRNA MIMAT0000519 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID02559128 mmu-miR-326-3p miRNA MIMAT0000559 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID02587913 mmu-miR-669m-3p miRNA MIMAT0009419 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID02618126 mmu-miR-376b-5p miRNA MIMAT0003388 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID02633787 mmu-miR-208b-3p miRNA MIMAT0004939 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID02696195 mmu-miR-7229-3p miRNA MIMAT0028427 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID02710270 mmu-miR-669f-3p miRNA MIMAT0005839 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID02720921 mmu-miR-3109-5p miRNA MIMAT0014949 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID02745720 mmu-miR-199b-3p miRNA MIMAT0004667 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID02750615 mmu-miR-449c-5p miRNA MIMAT0003460 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID02756652 mmu-miR-874-3p miRNA MIMAT0004853 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID02775327 mmu-miR-669l-3p miRNA MIMAT0017345 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID02816475 mmu-miR-199a-5p miRNA MIMAT0000229 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID02824390 mmu-miR-15b-5p miRNA MIMAT0000124 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID02863958 mmu-miR-30d-5p miRNA MIMAT0000515 Sh3rf1 mRNA 59009 CLIP-seq//Prediction 0.6559 Sh3rf1 RAID02964930 mmu-miR-129-2-3p miRNA MIMAT0000544 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID03008953 mmu-miR-7655-3p miRNA MIMAT0029817 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID03065525 mmu-miR-467a-3p miRNA MIMAT0002108 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID03066341 mmu-miR-6539 miRNA MIMAT0025584 Sh3rf1 mRNA 59009 Prediction 0.2202 Sh3rf1 RAID03103114 mmu-miR-148a-3p miRNA MIMAT0000516 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID03106122 mmu-miR-495-3p miRNA MIMAT0003456 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID03121749 mmu-miR-139-5p miRNA MIMAT0000656 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID03210699 mmu-miR-30e-5p miRNA MIMAT0000248 Sh3rf1 mRNA 59009 NGS (Next Generation Sequencing)//CLIP-seq//Prediction 0.7414 Sh3rf1 RAID03224770 mmu-miR-882 miRNA MIMAT0004847 Sh3rf1 mRNA 59009 Prediction 0.2202 Sh3rf1 RAID03276212 mmu-miR-20b-5p miRNA MIMAT0003187 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID03393791 mmu-miR-106b-5p miRNA MIMAT0000386 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID03415169 mmu-miR-410-3p miRNA MIMAT0001091 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID03438518 mmu-miR-489-3p miRNA MIMAT0003112 Sh3rf1 mRNA 59009 Prediction 0.2381 Sh3rf1 RAID03548982 mmu-miR-539-5p miRNA MIMAT0003169 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID03597551 mmu-miR-743b-3p miRNA MIMAT0004840 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID03642196 mmu-miR-184-3p miRNA MIMAT0000213 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID03664380 mmu-miR-27a-3p miRNA MIMAT0000537 Sh3rf1 mRNA 59009 Prediction 0.2202 Sh3rf1 RAID03708637 mmu-miR-206-3p miRNA MIMAT0000239 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID03749888 mmu-miR-499-3p miRNA MIMAT0017254 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID03765066 mmu-miR-124-3p miRNA MIMAT0000134 Sh3rf1 mRNA 59009 Prediction 0.2455 Sh3rf1 RAID03797153 mmu-miR-669c-3p miRNA MIMAT0017253 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID03952642 mmu-miR-218-5p miRNA MIMAT0000663 Sh3rf1 mRNA 59009 Prediction 0.2202 Sh3rf1 RAID03996927 mmu-miR-703 miRNA MIMAT0003493 Sh3rf1 mRNA 59009 Prediction 0.1828 Sh3rf1 RAID04013991 mmu-miR-376c-5p miRNA MIMAT0005295 Sh3rf1 mRNA 59009 Prediction 0.1828