DNA & RNA Element - microRNA |
Mirbase Acc | miRNA Name | Gene ID | Gene Symbol | miRNA Alignment | Alignment | Gene Alignment | miRNA Start | miRNA End | Gene Start | Gene End | Genome Coordinates | Conservation | Align Score | Seed Cat | Energy | mirSVR Score |
MIMAT0000377 | mmu-miR-299* | 244666 | Gm505 | uacauaCACCCUGCCAUU-UGGu | ||| | | |||| ||| | gggggaGUGUGCCUGUAAUACCa | 2 | 17 | 153 | 175 | [mm9:8:127427516-127427538:+] | 0.4982 | 120 | 0 | -12.74 | -0.2150 |
MIMAT0004579 | mmu-miR-302a* | 244666 | Gm505 | cguuCAUGUUGGUG-CAAAUUCa | | :||||::: ||||||| | caguGAGCAACUGUAGUUUAAGu | 2 | 19 | 115 | 137 | [mm9:8:127427478-127427500:+] | 0.5007 | 157 | 7 | -16.78 | -0.4481 |
MIMAT0004781 | mmu-miR-532-3p | 244666 | Gm505 | acGUUCGGAACCC--ACA-CCCUCc | |:| ||| || ||| ||||| | caCGACCCUGAGGAAUGUAGGGAGc | 2 | 21 | 214 | 238 | [mm9:8:127427577-127427601:+] | 0.4982 | 123 | 0 | -20.65 | -0.1446 |
MIMAT0003127 | mmu-miR-484 | 244666 | Gm505 | uaGCCCUCCCCUGACUC-GGACu | :|| ||| || ||| |||| | ggUGGCAGGUGA--GAGACCUGu | 2 | 21 | 52 | 72 | [mm9:8:127427415-127427435:+] | 0.5007 | 121 | 0 | -18.67 | -0.1134 |
MIMAT0003892 | mmu-miR-762 | 244666 | Gm505 | cgagacagggccGGGGUCGGGg | |:||||||| | gcaggagcaucaCUCCAGCCCa | 2 | 11 | 194 | 215 | [mm9:8:127427557-127427578:+] | 0.4982 | 146 | 7 | -20.51 | -0.4958 |
MIMAT0014815 | mmu-miR-3099* | 244666 | Gm505 | guucccgaccuUCCUUCGACc | ||||||||| | accagaugcucAGGAAGCUGa | 2 | 11 | 172 | 192 | [mm9:8:127427535-127427555:+] | 0.4982 | 150 | 7 | -20.48 | -0.2727 |
MIMAT0005291 | mmu-miR-582-5p | 244666 | Gm505 | ucauugaccaACUUGUUGACAu | |||:||||||| | agacacccagUGAGCAACUGUa | 2 | 13 | 108 | 129 | [mm9:8:127427471-127427492:+] | 0.5007 | 156 | 7 | -18.03 | -0.4551 |
MIMAT0009446 | mmu-miR-1971 | 244666 | Gm505 | agaGUCG-GGUCG-GAAAUg | | || ||||| ||||| | ugaCUGCGCCAGCGCUUUAu | 2 | 16 | 88 | 107 | [mm9:8:127427451-127427470:+] | 0.5007 | 122 | 0 | -17.86 | -0.1450 |
MIMAT0009458 | mmu-miR-1981 | 244666 | Gm505 | cgguGCAGAUU--CG-GGUCG-GAAAUg | :| ||:| || ||||| ||||| | agucUGACUGACUGCGCCAGCGCUUUAu | 2 | 21 | 80 | 107 | [mm9:8:127427443-127427470:+] | 0.5007 | 126 | 0 | -21.54 | -0.1450 |
MIMAT0011212 | mmu-miR-2136 | 244666 | Gm505 | guGUAGAGUCAGUUGUGGGUc | |: :|:| | :||||||| | agCGCUUUA-UAGACACCCAg | 2 | 20 | 98 | 117 | [mm9:8:127427461-127427480:+] | 0.5007 | 149 | 7 | -20.84 | -0.2204 |
MIMAT0014852 | mmu-miR-3072* | 244666 | Gm505 | ggacgggagggagcCCCAGGGa | ||||||| | ------gguggaguGGGUCCCa | 2 | 9 | 1 | 16 | [mm9:8:127427364-127427379:+] | 0.5007 | 140 | 7 | -14.80 | -0.1537 |
MIMAT0000656 | mmu-miR-139-5p | 244666 | Gm505 | gaccUCUGUG---CA--CG-UGACAUCu | |||||| || || ||||||| | uuauAGACACCCAGUGAGCAACUGUAGu | 2 | 19 | 104 | 131 | [mm9:8:127427467-127427494:+] | 0.5007 | 151 | 7 | -21.53 | -0.4612 |
MIMAT0003112 | mmu-miR-489 | 244666 | Gm505 | cgACGGUAUAUACACCACA-GUAa | ||:|| :|:|| |||| ||| | cgUGUCA-GUGUGCUGUGUCCAUc | 2 | 22 | 257 | 279 | [mm9:8:127427620-127427642:+] | 0.5058 | 127 | 0 | -17.02 | -0.2089 |