DNA & RNA Element - RepTar |
Gene Name | miRNA | Begin | End | Profile |
Fbxo22 | mmu-miR-218 | beg:187 | end:198 | pic:3' TGTACCAATCTAGTTCGTGTT 5'& .||||||| &5' ------------TAAGCACA- 3' |
Fbxo22 | mmu-miR-669d | beg:185 | end:203 | pic:3' TGTATATGTACG--TGTGTGTTCA 5'& ||. .||||||||| &5' ---------TGTAAGCACACAAGT 3' |
Fbxo22 | mmu-miR-328 | beg:284 | end:303 | pic:3' TGCCTTCCCGTCTCTCCCGGTC 5'& .|| ||. |||||||| &5' GCGA---GGTT--GAGGGCCA- 3' |
Fbxo22 | mmu-miR-433 | beg:340 | end:356 | pic:3' TGTGGCTCCTCGGG-TAGTACTA 5'& ||| ||||||| &5' ---------AGCAGAATCATGA- 3' |
Fbxo22 | mmu-miR-19astar | beg:88 | end:100 | pic:3' CATCACGTTGATACGTTTTGAT 5'& ||||||||| &5' -------------GCAAAACTA 3' |
Fbxo22 | mmu-miR-707 | beg:341 | end:358 | pic:3' GCATCCGTTCGCCGTACTGAC 5'& || || ||||||| &5' -----GC-AGAATCATGACT- 3' |
Fbxo22 | mmu-miR-145star | beg:292 | end:310 | pic:3' GTTCTTGTCATAAAGGTCCTTA 5'& .||..| ||||||| &5' -GAGGGCCA-----CCAGGAA- 3' |
Fbxo22 | mmu-miR-3099star | beg:575 | end:585 | pic:3' GTTCCCGACCTTCCTTCGACC 5'& ||||||| &5' -------------GAAGCTG- 3' |
Fbxo22 | mmu-miR-1971 | beg:695 | end:712 | pic:3' AGAGTCGGGTCGGAAATG 5'& .| |||||||||. &5' ----GGAACAGCCTTTAT 3' |
Fbxo22 | mmu-miR-1952 | beg:302 | end:318 | pic:3' GTCTTCCTCCCACCTCT 5'& |||| |||||||. &5' ----AGGAAGGTGGAGG 3' |
Fbxo22 | mmu-miR-706 | beg:38 | end:52 | pic:3' AAAAAACTCTGTCCCAAAGAGA 5'& .|||||||||| &5' -----------GGGGTTTCTCT 3' |
Fbxo22 | mmu-miR-292-5p | beg:549 | end:568 | pic:3' GTTTTCTCGGGGGTCAAACTCA 5'& ||||| | ||||||| &5' --AAAGAA---CTGGTTTGAG- 3' |
Fbxo22 | mmu-miR-290-5p | beg:552 | end:568 | pic:3' TTTCACGGGGGTATCAAACTCA 5'& | |. .||||||| &5' -----GAACT---GGTTTGAG- 3' |
Fbxo22 | mmu-miR-293star | beg:554 | end:568 | pic:3' GTTTTACAGTGTGTCAAACTCA 5'& || ..||||||| &5' ---------AC-TGGTTTGAG- 3' |
Fbxo22 | mcmv-miR-m01-1 | beg:656 | end:677 | pic:3' GGCAAGCTGCAAT---AAGAGGAGA 5'& .|| |||| ||.|||||| &5' -----TGA-GTTAGCTTTTTCCTCT 3' |
Fbxo22 | mcmv-miR-m01-3 | beg:693 | end:713 | pic:3' AGCTCCGTTGTCAGCGAAGTGGC 5'& | ||| ||||| | |||.|.| &5' -CAAGGGAACAG-C-CTTTATC- 3' |
Fbxo22 | mcmv-miR-m108-2-3p | beg:645 | end:665 | pic:3' TGGCCAGT-GAGCAGAGCTCAGTG 5'& .|| || .|.|| ||||.| &5' -TCGTTCTTTTTGT---GAGTTA- 3' |
Fbxo22 | mcmv-miR-m21-1 | beg:521 | end:530 | pic:3' GCCGAACTTGCACAGGGGATA 5'& |||||| &5' --------------CCCCTA- 3' |
Fbxo22 | mcmv-miR-M23-2 | beg:495 | end:517 | pic:3' GGCGAACTGGCTCCGGGGGTA 5'& || || .||| |||||| &5' CC-CTGTCTCGAAACCCCCA- 3' |
Fbxo22 | mcmv-miR-m88-1 | beg:419 | end:439 | pic:3' TCTGGGGCTGTAGCTGAAGAC 5'& ||.| |.|| ||.||||| &5' AGGCA--GGCA--GATTTCTG 3' |
Fbxo22 | mmu-miR-101b | beg:618 | end:641 | pic:3' AAGTC-GATAGTGTCATGACAT 5'& ||| ||.|. ||||||| &5' --CAGTCTGTTTTGTTACTGTA 3' |
Fbxo22 | mmu-miR-1186 | beg:392 | end:413 | pic:3' GTACGGAAATTAAGGTCGTGAG 5'& |||||||| ||||||||| &5' ----CCTTTAATCCCAGCACTC 3' |
Fbxo22 | mmu-miR-1186b | beg:384 | end:407 | pic:3' CACCACGTACGGAAATTAGGGT 5'& ||| |||. |||||||||||| &5' GTGATGCGCACCTTTAATCCCA 3' |
Fbxo22 | mmu-miR-1188 | beg:7 | end:31 | pic:3' AGGAC---CG-GGTTGGAGTGTGGT 5'& ||| || || .|||||||| &5' --CTGAGAGCACCT--TTCACACCA 3' |
Fbxo22 | mmu-miR-1191 | beg:205 | end:218 | pic:3' ATCCCGATGTATCATTCTGAC 5'& |||.||.||| &5' -----------AGTGAGGCTG 3' |
Fbxo22 | mmu-miR-1191 | beg:480 | end:503 | pic:3' ATCCCGATGTATCATTCTGAC 5'& ||||||||| || || ||| &5' -AGGGCTACAGAGAAACCCTG 3' |
Fbxo22 | mmu-miR-1196 | beg:413 | end:436 | pic:3' TCCGTCTCCGTCCATCTAAA 5'& ||||||||||||| |||||| &5' AGGCAGAGGCAGGCAGATTT 3' |
Fbxo22 | mmu-miR-1198 | beg:469 | end:492 | pic:3' GGTTCGGTCGGTCCTTGTGTAT 5'& |||.| |||||||| .||| &5' CCAGGACAGCCAGGGCTACA-- 3' |
Fbxo22 | mmu-miR-144 | beg:620 | end:641 | pic:3' TCATGTAGT--AGAT-ATGACAT 5'& .|| |.|. ||||||| &5' -----GTCTGTTTTGTTACTGTA 3' |
Fbxo22 | mmu-miR-151-3p | beg:438 | end:461 | pic:3' GGAGTTCC--TCGGAGTCAGATC 5'& .| .||| ||||| .||||| &5' -TTGGAGGCCAGCCT-GGTCTA- 3' |
Fbxo22 | mmu-miR-182 | beg:363 | end:380 | pic:3' GCCACACTCAAGATGGTAACGGTTT 5'& ||| |||||||. &5' ------GAGAAA----ATTGCCAG- 3' |
Fbxo22 | mmu-miR-185 | beg:662 | end:680 | pic:3' AGTCCTTGACGGAAA--GAGAGGT 5'& ||.||| ||||.|| &5' ---------GCTTTTTCCTCTTCA 3' |
Fbxo22 | mmu-miR-1892 | beg:508 | end:532 | pic:3' TAGGAGGGA----GGGCAGGGGTTTA 5'& || ||| ||| |||.||| &5' --CC-CCCACACACCCC-CCCTAAA- 3' |
Fbxo22 | mmu-miR-18a | beg:3 | end:23 | pic:3' GATAGACGTGA-TCTACGTGGAAT 5'& || |.|| ||| ||||||| &5' ----CT-CGCTGAGA-GCACCTT- 3' |
Fbxo22 | mmu-miR-18b | beg:1 | end:23 | pic:3' GATTGTCGTGA-TCTACGTGGAAT 5'& .| |.|| ||| ||||||| &5' ---GCCTCGCTGAGA-GCACCTT- 3' |
Fbxo22 | mmu-miR-1900 | beg:292 | end:315 | pic:3' ACTTCC--TGGTCTCTCCCGCCGG 5'& |||.|| ||||| || ||.|| &5' TGAGGGCCACCAG-GAAGGTGG-- 3' |
Fbxo22 | mmu-miR-1902 | beg:6 | end:24 | pic:3' TTCAGTACGGATGACGTGGAGA 5'& ||. ||||||.| &5' -------GCTGAGAGCACCTTT 3' |
Fbxo22 | mmu-miR-1930 | beg:296 | end:319 | pic:3' TGCGAC-GTCCATGATACCTCCA 5'& || |||| | .||||||| &5' --GCCACCAGG-AAGGTGGAGGT 3' |
Fbxo22 | mmu-miR-1933-5p | beg:341 | end:358 | pic:3' TTTGATTCTGGCTTGTGGTACTGA 5'& .| || |.||||||| &5' --------GCAGA--ATCATGACT 3' |
Fbxo22 | mmu-miR-1934 | beg:411 | end:433 | pic:3' TCTCCTGCTTCGTCCCCTGGTCT 5'& .|||| ||.||||| |||| &5' GGAGGCAGAGGCAGG----CAGA 3' |
Fbxo22 | mmu-miR-194 | beg:617 | end:637 | pic:3' AGGTGTACCTCAACGACAATGT 5'& ||| ||| .|||||| &5' ---ACAGTCTGTT-TTGTTAC- 3' |
Fbxo22 | mmu-miR-1946a | beg:439 | end:458 | pic:3' TTTTCACACACGGTGGTGACGGGCCGA 5'& || |||| |||.||. &5' -----TGGAGGCCA-----GCCTGGT- 3' |
Fbxo22 | mmu-miR-1954 | beg:568 | end:579 | pic:3' TTGTCCCAGAGTGAGACGTCA 5'& .|.||||| &5' ------------TTTTGCAG- 3' |
Fbxo22 | mmu-miR-1962 | beg:689 | end:710 | pic:3' TACACAGGGTCACGGTCGGAGA 5'& || | .| ||||||.| &5' ---TG-CAAGGGAACAGCCTTT 3' |
Fbxo22 | mmu-miR-1981 | beg:688 | end:712 | pic:3' CGGTGCAGATTCGGGTCGGAAATG 5'& | | ..| |||||||||. &5' -CTGCAA--GGGAACAGCCTTTAT 3' |
Fbxo22 | mmu-miR-19astar | beg:221 | end:240 | pic:3' CATCACGTTGATACGTTTTGAT 5'& .| |||| |||||.||. &5' --GGCGCAA----GCAAAGCTG 3' |
Fbxo22 | mmu-miR-203 | beg:71 | end:90 | pic:3' GATCACC-AGGATTTGTAAAGTG 5'& || ||| |||.||||.| &5' -----GGATCC-AAATATTTTA- 3' |
Fbxo22 | mmu-miR-2134 | beg:462 | end:479 | pic:3' CGTGGGGCAA--AGGGTTCTG 5'& || |.|||.||| &5' -------GTGAGTTCCAGGAC 3' |
Fbxo22 | mmu-miR-2145 | beg:476 | end:504 | pic:3' TTGGTCCGGGC-------TGGGACGA 5'& |.||||| |. ||||||. &5' AGCCAGGGCTACAGAGAAACCCTGT- 3' |
Fbxo22 | mmu-miR-214star | beg:409 | end:431 | pic:3' CGTGTCGTTCACATCTGTCCGT 5'& |.| |.| ||.|||||| &5' ---CGGGAGGCAGAGGCAGGCA 3' |
Fbxo22 | mmu-miR-218-2star | beg:337 | end:355 | pic:3' GCGCCACGAACTGTCTTGGTAC 5'& .|| |||||.|||| &5' -------TTTAGCAGAATCATG 3' |
Fbxo22 | mmu-miR-2183 | beg:302 | end:323 | pic:3' TCC-TCCAGTCC-CCAAGTT 5'& ||| |||| || ||||.|| &5' AGGAAGGT--GGAGGTTTAA 3' |
Fbxo22 | mmu-miR-224 | beg:340 | end:360 | pic:3' TTGCCTTGGTGATCACTGAAT 5'& |.| |||.|| ||||||| &5' AGCAGAATCA----TGACTTA 3' |
Fbxo22 | mmu-miR-22star | beg:160 | end:177 | pic:3' ATTTCGAACGGTG---ACTTCTTGA 5'& ||. |||||.|| &5' ----------CATAGATGAAGGAC- 3' |
Fbxo22 | mmu-miR-29bstar | beg:441 | end:453 | pic:3' ATTTGGTGGTATACTTTGGTCG 5'& ||..||||| &5' -------------GAGGCCAGC 3' |
Fbxo22 | mmu-miR-3099star | beg:203 | end:218 | pic:3' GTTCCCGACCTTC-CTTCGACC 5'& |||| ||.|||| &5' ---------GAAGTGAGGCTG- 3' |
Fbxo22 | mmu-miR-328 | beg:471 | end:490 | pic:3' TGCCTTCCCGTCTCTCCCGGTC 5'& ||| ||| |||||.| &5' -----AGGACAGCCAGGGCTA- 3' |
Fbxo22 | mmu-miR-328 | beg:409 | end:432 | pic:3' TGCCTTCCCGTCTCTCCCGGTC 5'& |||.| |||||||. | ||| &5' -CGGGA-GGCAGAGGCAGGCAG 3' |
Fbxo22 | mmu-miR-346 | beg:411 | end:434 | pic:3' TCTCCG--TCCGTGAGCCCGTCTGT 5'& .||||| ||||| ||||||. &5' GGAGGCAGAGGCA----GGCAGAT- 3' |
Fbxo22 | mmu-miR-3470a | beg:445 | end:469 | pic:3' GGTCGGACCAGATGTTTCACT 5'& |||||||||||||.|.||||| &5' CCAGCCTGGTCTATAGAGTGA 3' |
Fbxo22 | mmu-miR-3470b | beg:445 | end:469 | pic:3' GGTCGGACCAGATGTCTCACT 5'& |||||||||||||.||||||| &5' CCAGCCTGGTCTATAGAGTGA 3' |
Fbxo22 | mmu-miR-3475 | beg:19 | end:43 | pic:3' AAGTTTGGTACACGGAGGTCT 5'& |||| ||||||| ||. |. &5' TTCACACCATGTAACTTTGGG 3' |
Fbxo22 | mmu-miR-34cstar | beg:373 | end:390 | pic:3' GGACCGACACACCAATCACTAA 5'& || ||| |.||||| &5' CCAGGCG-------TGGTGAT- 3' |
Fbxo22 | mmu-miR-350 | beg:640 | end:662 | pic:3' CTTTCA-CATACCCGAAACACTT 5'& ||||| || .|||||||. &5' -AAAGTCGTTCT--TTTTGTGAG 3' |
Fbxo22 | mmu-miR-376astar | beg:352 | end:378 | pic:3' TGAGTATC-TTCCTCTTA-GATGG 5'& |||.| || |||||||| .|.|| &5' ACTTA-AGAAAGGAGAAAATTGCC 3' |
Fbxo22 | mmu-miR-378star | beg:53 | end:77 | pic:3' TGTGTCCTGG-ACCTC--AGTCCTC 5'& .|||| |||| ||.||| &5' ---TAGGAAAATGGAAACTCGGGA- 3' |
Fbxo22 | mmu-miR-384-3p | beg:41 | end:62 | pic:3' TAACACTTGTT----AAAGATCCTTA 5'& | . |||.|||||| &5' -----GGGTTTCTCTTTTTTAGGAA- 3' |
Fbxo22 | mmu-miR-412 | beg:295 | end:316 | pic:3' GCCGATCACCTGG-------TCCACTT 5'& ||.|| |||||.| &5' --------GGGCCACCAGGAAGGTGGA 3' |
Fbxo22 | mmu-miR-469 | beg:405 | end:427 | pic:3' CCTGTG-GTTCTAGTTACTTTCTCCGT 5'& .||| |..|| |. ||||||| &5' --GCACTCGGGA-----GGCAGAGGCA 3' |
Fbxo22 | mmu-miR-470 | beg:455 | end:478 | pic:3' TGAGTGGTCACGGTC-AGGTTCTT 5'& || .|| |. || ||||.|| &5' --TCTATAGAGTGAGTTCCAGGA- 3' |
Fbxo22 | mmu-miR-485 | beg:691 | end:710 | pic:3' CTTAAGTAGTGCCG--GTCGGAGA 5'& || || ||||||.| &5' --------CAAGGGAACAGCCTTT 3' |
Fbxo22 | mmu-miR-488 | beg:6 | end:26 | pic:3' CTGGTTCTTTGTCGGAAAGTT 5'& .| || |.|| ||||||| &5' -GCTGAG-AGCA-CCTTTCA- 3' |
Fbxo22 | mmu-miR-488 | beg:690 | end:710 | pic:3' CTGGTTCTTTGTCGGAAAGTT 5'& .| |.|.|||||||||| &5' -GCAAGGGAACAGCCTTT--- 3' |
Fbxo22 | mmu-miR-540-3p | beg:469 | end:489 | pic:3' GGTCCTAGCTGGAGACTGGA 5'& |||||| | .|| |.|. &5' CCAGGA-CAGCCAG-GGCT- 3' |
Fbxo22 | mmu-miR-542-3p | beg:618 | end:637 | pic:3' AAAGTCAATAGTTAGACAGTGT 5'& |||| |.|||.|| &5' ---CAGTCTGT--TTTGTTAC- 3' |
Fbxo22 | mmu-miR-544 | beg:560 | end:581 | pic:3' CTCGAACGATTTTT-ACGTCTTA 5'& |.||| ||. ||||||| &5' --GTTTGAGAAGTTTTGCAGAA- 3' |
Fbxo22 | mmu-miR-546 | beg:286 | end:306 | pic:3' CTGAGGCA--CGGTGGTA 5'& || ..| ||||||| &5' GAGGTTGAGGGCCACCA- 3' |
Fbxo22 | mmu-miR-669e | beg:460 | end:479 | pic:3' TACTTGTACGTGTGTGTTCTGT 5'& || . |. | ||.|||| &5' --GAGTGAGTT--C-CAGGACA 3' |
Fbxo22 | mmu-miR-679 | beg:701 | end:722 | pic:3' TGGTTCTCAGTGGAGTGTCAGG 5'& .|| |.|.| ||||||.| &5' GCCT----TTATCACACAGTTC 3' |
Fbxo22 | mmu-miR-681 | beg:198 | end:218 | pic:3' TCGACGGACGGTCGCTCCGAC 5'& |.| ||.||||||| &5' ----GTCAAGAAGTGAGGCTG 3' |
Fbxo22 | mmu-miR-682 | beg:674 | end:695 | pic:3' GTCTGAAGTGACA-----CTGACGTC 5'& |||||. || ||||||| &5' ----CTTCATAGTAAAGAGACTGCA- 3' |
Fbxo22 | mmu-miR-682 | beg:255 | end:277 | pic:3' GTCTGAAGTGACAC---TGACGTC 5'& ||||.| |||| |||||| &5' CAGATT---CTGTAGCCACTGCA- 3' |
Fbxo22 | mmu-miR-682 | beg:619 | end:641 | pic:3' GTCTGAAGTGACACTGACGTC 5'& ||| || .||| ||||.| &5' CAGTCTGTTTTGTTACTGTA- 3' |
Fbxo22 | mmu-miR-684 | beg:534 | end:552 | pic:3' AACTGAACTTCCCTTTTGA 5'& || ||| |||.||.| &5' --GAA--GAAAGGAGAATT 3' |
Fbxo22 | mmu-miR-684 | beg:350 | end:371 | pic:3' AACTGAA--CTTCCCTTTTGA 5'& |||||| ||| |||.|| &5' -TGACTTAAGAAAGGAGAA-- 3' |
Fbxo22 | mmu-miR-686 | beg:405 | end:422 | pic:3' AGAAGTGGCAGACCCTTCGTTA 5'& |||. ||||.|||. &5' ----CACTC---GGGAGGCAG- 3' |
Fbxo22 | mmu-miR-693-3p | beg:219 | end:241 | pic:3' AATGTCGGTGTAGACTTTCGACG 5'& .|| |.|| |||||||| &5' ---TAGGCGCAAGC-AAAGCTGC 3' |
Fbxo22 | mmu-miR-693-5p | beg:202 | end:223 | pic:3' CTTTTGAAAGCCTACACCGAC 5'& ||.| | || |||||.| &5' -AAGAAGTGAGGCTGTGGTT- 3' |
Fbxo22 | mmu-miR-705 | beg:757 | end:774 | pic:3' ACGGGTGGGGTGGAGGGTGG 5'& || .||.||||||. &5' -----ACA-TACTTCCCACT 3' |
Fbxo22 | mmu-miR-741 | beg:38 | end:51 | pic:3' AGATGTATCTTACCGTAGAGAGT 5'& || .|.|||| &5' ------------GGGGTTTCTC- 3' |
Fbxo22 | mmu-miR-767 | beg:466 | end:488 | pic:3' ACGAG--TCTGTTGGTACCACGT 5'& |.|| .||||.||| || || &5' -GTTCCAGGACAGCCA-GG-GC- 3' |
Fbxo22 | mmu-miR-802 | beg:619 | end:639 | pic:3' TTCCTACTTAGA---AACAATGACT 5'& |.||| ||||||||| &5' -------AGTCTGTTTTGTTACTG- 3' |
Fbxo22 | mmu-miR-871 | beg:420 | end:442 | pic:3' GTACTGACCGTGATTAGACTTAT 5'& |.| |||| |||||.| &5' ---GGCAGGCAGATTTCTGAGT- 3' |
Fbxo22 | mmu-miR-881 | beg:699 | end:721 | pic:3' AGATAAGTCTTTTC---TGTGTCAA 5'& ||| |||||||| &5' ------CAGCCTTTATCACACAGTT 3' |
Fbxo22 | mmu-miR-742star | beg:645 | end:663 | pic:3' ACTAATCGTTGGT--ACACTCAT 5'& |. |. ||||||| &5' ------GTT-CTTTTTGTGAGT- 3' |