DNA & RNA Element - microRNA |
Mirbase Acc | miRNA Name | Gene ID | Gene Symbol | miRNA Alignment | Alignment | Gene Alignment | miRNA Start | miRNA End | Gene Start | Gene End | Genome Coordinates | Conservation | Align Score | Seed Cat | Energy | mirSVR Score |
MIMAT0000129 | mmu-miR-30a* | 67664 | Rnf125 | cgacguuuguaggcuGACUUUc | |||||| | gacauuaaaggaaauCUGAAAu | 2 | 8 | 387 | 408 | [mm9:18:21142073-21142094:+] | 0.5811 | 120 | 6 | -7.87 | -0.1133 |
MIMAT0000137 | mmu-miR-126-5p | 67664 | Rnf125 | gcgcAUGGUUUUCA-UUAUUAc | || :|| || |||||| | ccaaUAAGGAACGUGAAUAAUc | 2 | 18 | 435 | 456 | [mm9:18:21142121-21142142:+] | 0.5811 | 121 | 6 | -4.96 | -0.9296 |
MIMAT0000249 | mmu-miR-30e* | 67664 | Rnf125 | cgacauuuguaggcuGACUUUc | |||||| | gacauuaaaggaaauCUGAAAu | 2 | 8 | 387 | 408 | [mm9:18:21142073-21142094:+] | 0.5811 | 120 | 6 | -7.87 | -0.1133 |
MIMAT0000367 | mmu-miR-291a-5p | 67664 | Rnf125 | ucUCUCCC--GGAGGUG-AAACUAc | ||:||| : || || |||||| | ggAGGGGGAUUGUCGACGUUUGAUg | 2 | 21 | 60 | 84 | [mm9:18:21141746-21141770:+] | 0.6374 | 127 | 6 | -26.36 | -0.5050 |
MIMAT0004574 | mmu-miR-294* | 67664 | Rnf125 | ucUAUCCCGGAG-GUAA-AACUCa | || | |||: |||| ||||| | agAUCUGCCCUUACAUUCUUGAGu | 2 | 21 | 158 | 181 | [mm9:18:21141844-21141867:+] | 0.5596 | 127 | 0 | -17.85 | -0.4397 |
MIMAT0000378 | mmu-miR-300 | 67664 | Rnf125 | cuucucucgaacgggAACGUAu | |||||| | cuugucuuuguuaugUUGCAUu | 2 | 8 | 112 | 133 | [mm9:18:21141798-21141819:+] | 0.6374 | 120 | 6 | -13.26 | -0.1142 |
MIMAT0004580 | mmu-miR-34c* | 67664 | Rnf125 | ggaccGACACA-CCAAUCACUAa | |||||| |||||||| | gcuucCUGUGUCCAUUAGUGAUg | 2 | 18 | 268 | 290 | [mm9:18:21141954-21141976:+] | 0.5699 | 160 | 7 | -18.95 | -0.3694 |
MIMAT0004581 | mmu-miR-34b-3p | 67664 | Rnf125 | cuaccgucaccucAAUCACUAa | |||||||| | cuuccuguguccaUUAGUGAUg | 2 | 10 | 269 | 290 | [mm9:18:21141955-21141976:+] | 0.5699 | 145 | 7 | -10.98 | -0.3783 |
MIMAT0004625 | mmu-miR-16* | 67664 | Rnf125 | agUCGUCGUGUCA-GUUAUGACc | ||:| ||:| | :||||||| | auAGUA-CAUAAUAUAAUACUGc | 2 | 21 | 515 | 536 | [mm9:18:21142201-21142222:+] | 0.5514 | 157 | 7 | -15.50 | -1.0163 |
MIMAT0004660 | mmu-miR-19a* | 67664 | Rnf125 | caUCACGUUGAUACGUU-UUGAu | | | :||: ||||| |||| | auAAUAUAAUACUGCAACAACUu | 2 | 21 | 522 | 544 | [mm9:18:21142208-21142230:+] | 0.5514 | 124 | 0 | -7.97 | -0.3539 |
MIMAT0004670 | mmu-miR-7a* | 67664 | Rnf125 | auaccgucugacacuAAACAAc | |||||| | uauuaccugcuugucUUUGUUa | 2 | 8 | 103 | 124 | [mm9:18:21141789-21141810:+] | 0.6374 | 120 | 6 | -5.43 | -0.1445 |
MIMAT0004704 | mmu-miR-335-3p | 67664 | Rnf125 | ccaGUCCUCGUU--AUUACUUUUu | |: || :|| | ||||||| | gaaCGUGAAUAAUCUUAUGAAAAg | 2 | 20 | 443 | 466 | [mm9:18:21142129-21142152:+] | 0.5811 | 150 | 7 | -11.53 | -0.8376 |
MIMAT0002112 | mmu-miR-471 | 67664 | Rnf125 | caCUUUUCGUGAUAUGAUG-CAu | ||:|| || |:|||||| || | ugGAGAAACA-UGUACUACAGUa | 2 | 21 | 83 | 104 | [mm9:18:21141769-21141790:+] | 0.6374 | 134 | 0 | -17.57 | -1.1697 |
MIMAT0003189 | mmu-miR-291b-5p | 67664 | Rnf125 | ccUCUCCC--GGAGGUG-AAACUAg | ||:||| : || || |||||| | ggAGGGGGAUUGUCGACGUUUGAUg | 2 | 21 | 60 | 84 | [mm9:18:21141746-21141770:+] | 0.6374 | 127 | 6 | -24.04 | -0.5050 |
MIMAT0003459 | mmu-miR-682 | 67664 | Rnf125 | gucugaagugacacUGACGUc | |||||| | guacauaauauaauACUGCAa | 2 | 8 | 518 | 538 | [mm9:18:21142204-21142224:+] | 0.5514 | 120 | 6 | -10.20 | -0.1537 |
MIMAT0003502 | mmu-miR-712 | 67664 | Rnf125 | ccauggcgGGCCCACUUCCUc | |:| ||||||| | uuaagaugCUGCUUGAAGGAc | 2 | 14 | 38 | 58 | [mm9:18:21141724-21141744:+] | 0.6374 | 145 | 7 | -15.78 | -0.3759 |
MIMAT0003508 | mmu-miR-501-5p | 67664 | Rnf125 | aaaguggGUCCCUG---UUUCCUaa | :| |||| |||||| | aacaaaaUAUGGACAUUAAAGGAaa | 3 | 16 | 376 | 400 | [mm9:18:21142062-21142086:+] | 0.5811 | 126 | 0 | -13.75 | -0.1231 |
MIMAT0003511 | mmu-miR-450b-5p | 67664 | Rnf125 | auaaguccuugUAUGACGUUuu | ||||||||| | uacauaauauaAUACUGCAAca | 3 | 12 | 519 | 540 | [mm9:18:21142205-21142226:+] | 0.5514 | 135 | 0 | -10.48 | -0.1404 |
MIMAT0003512 | mmu-miR-450b-3p | 67664 | Rnf125 | uacgUACGUUUUACAAGGGUUa | | || | || ||||||| | uauaACGCUACAUAUUCCCAAc | 2 | 19 | 295 | 316 | [mm9:18:21141981-21142002:+] | 0.5699 | 158 | 7 | -9.54 | -0.5839 |
MIMAT0003514 | mmu-miR-718 | 67664 | Rnf125 | gcuGUGG-GCCGGCCCGC-CUUc | ||:| :||:: |||| ||| | uguCAUCAUGGUUAGGCGAGAAa | 2 | 19 | 317 | 339 | [mm9:18:21142003-21142025:+] | 0.5811 | 121 | 0 | -20.23 | -0.5092 |
MIMAT0004238 | mmu-miR-743a | 67664 | Rnf125 | agAUGAGUCGAACCACAGAAAg | || |:| || ||||||| | agUA-UUACCUGCUUGUCUUUg | 2 | 21 | 101 | 121 | [mm9:18:21141787-21141807:+] | 0.6374 | 150 | 7 | -13.02 | -0.8571 |
MIMAT0004840 | mmu-miR-743b-3p | 67664 | Rnf125 | agAUAAGUCGUAC-UACAGAAAg | |||| | | || ||||||| | agUAUU-A-CCUGCUUGUCUUUg | 2 | 21 | 101 | 121 | [mm9:18:21141787-21141807:+] | 0.6374 | 147 | 7 | -8.76 | -0.8606 |
MIMAT0004848 | mmu-miR-883a-5p | 67664 | Rnf125 | cauugacgaugaaGAGAGUCGu | |||||||| | cacgagacacagcCUCUCAGCc | 2 | 10 | 198 | 219 | [mm9:18:21141884-21141905:+] | 0.5596 | 145 | 7 | -14.05 | -0.2374 |
MIMAT0004882 | mmu-miR-466f-3p | 67664 | Rnf125 | caCACA--UA--CAC-ACACACAUAc | |||| || ||| ||||||||| | cuGUGUCCAUUAGUGAUGUGUGUAUa | 2 | 20 | 273 | 298 | [mm9:18:21141959-21141984:+] | 0.5699 | 160 | 7 | -18.47 | -0.8942 |
MIMAT0005291 | mmu-miR-582-5p | 67664 | Rnf125 | ucauugaccaacuuGUUGACAu | ||||||| | acgcuacauauuccCAACUGUc | 2 | 9 | 299 | 320 | [mm9:18:21141985-21142006:+] | 0.5755 | 140 | 7 | -7.99 | -0.4516 |
MIMAT0005834 | mmu-miR-466i | 67664 | Rnf125 | auCACACAUA--CAC-ACACACAUa | |||| || ||| |||||||| | cuGUGUCCAUUAGUGAUGUGUGUAu | 2 | 21 | 273 | 297 | [mm9:18:21141959-21141983:+] | 0.5699 | 162 | 7 | -19.16 | -1.0643 |
MIMAT0005846 | mmu-miR-467f | 67664 | Rnf125 | acauccaCAC-ACACACAUAUa | ||| |||||||||| | uccauuaGUGAUGUGUGUAUAa | 2 | 15 | 278 | 299 | [mm9:18:21141964-21141985:+] | 0.5699 | 161 | 7 | -17.39 | -0.9574 |
MIMAT0007876 | mmu-miR-1907 | 67664 | Rnf125 | uggaGGUCUAGGAGACGACGAg | ||| | ||||||| | cguaCCAUUUAAGAUGCUGCUu | 2 | 19 | 30 | 51 | [mm9:18:21141716-21141737:+] | 0.6246 | 142 | 7 | -15.86 | -0.6449 |
MIMAT0009390 | mmu-miR-1927 | 67664 | Rnf125 | agucAGGGAUUGUAGGU-CUCCAg | | |||: ||:|| ||||| | agcaUGCCUGUAAUUCAGGAGGUg | 2 | 20 | 581 | 604 | [mm9:18:21142267-21142290:+] | 0.5021 | 127 | 0 | -19.18 | -0.4180 |
MIMAT0009393 | mmu-miR-1930 | 67664 | Rnf125 | ugcgacGUCCAUGAUACCUCCa | |||| | ||||||| | cuuagcCAGG--C-AUGGAGGa | 2 | 17 | 563 | 581 | [mm9:18:21142249-21142267:+] | 0.5267 | 143 | 7 | -17.42 | -0.2432 |
MIMAT0009393 | mmu-miR-1930 | 67664 | Rnf125 | ugCGACGUCCAUGAU-ACCUCCa | ||||| | | | |||||| | auGCUGCUUGAAGGACUGGAGGg | 2 | 21 | 43 | 65 | [mm9:18:21141729-21141751:+] | 0.6374 | 124 | 6 | -23.19 | -0.5549 |
MIMAT0009405 | mmu-miR-1941-5p | 67664 | Rnf125 | uucGGAG-ACAUGGUCGUAGAGGga | :||| || |:| |||||| | aauUCUCAUGCUCUA--AUCUCCaa | 3 | 22 | 416 | 438 | [mm9:18:21142102-21142124:+] | 0.5811 | 129 | 0 | -15.77 | -0.1305 |
MIMAT0009435 | mmu-miR-1962 | 67664 | Rnf125 | uacacagGGUCACGGUCGGAGa | | || ||||||| | uuaaccaCGAGACACAGCCUCu | 2 | 16 | 193 | 214 | [mm9:18:21141879-21141900:+] | 0.5596 | 143 | 7 | -19.59 | -0.4822 |
MIMAT0009437 | mmu-miR-1964 | 67664 | Rnf125 | uuucggcCUCGGGUCUUCAGcc | || ::: |||||| | aagggaaGAAUUU-GAAGUCac | 3 | 16 | 472 | 492 | [mm9:18:21142158-21142178:+] | 0.5811 | 121 | 0 | -11.67 | -0.1043 |
MIMAT0011222 | mmu-miR-2146 | 67664 | Rnf125 | guguaccuugggaAGAGGUg | |||||| | ucucaugcucuaaUCUCCAa | 2 | 8 | 419 | 438 | [mm9:18:21142105-21142124:+] | 0.5811 | 120 | 6 | -15.91 | -0.1687 |
MIMAT0000124 | mmu-miR-15b | 67664 | Rnf125 | acauuUGGU-ACUAC-ACGACGAu | |||| | | | ||||||| | cucguACCAUUUAAGAUGCUGCUu | 2 | 18 | 28 | 51 | [mm9:18:21141714-21141737:+] | 0.6246 | 151 | 7 | -15.49 | -0.6449 |
MIMAT0000148 | mmu-miR-136 | 67664 | Rnf125 | ggUAGUAGUU-UUGUUUACCUCa | ||::||:| : : :|||||| | ggAUUGUCGACGUUUGAUGGAGa | 2 | 21 | 66 | 88 | [mm9:18:21141752-21141774:+] | 0.6374 | 139 | 6 | -13.48 | -0.1336 |
MIMAT0000156 | mmu-miR-144 | 67664 | Rnf125 | ucAUGUAGUAGA-UAUGACau | ||||| || | |||||| | agUACAUAAUAUAAUACUGca | 3 | 19 | 517 | 537 | [mm9:18:21142203-21142223:+] | 0.5514 | 145 | 0 | -14.48 | -0.1517 |
MIMAT0000210 | mmu-miR-181a | 67664 | Rnf125 | ugaGUGGCUGUCGC-AACUU-ACAa | || | | ||| ||||| ||| | caaCAACUUCUGCGUUUGAAGUGUa | 2 | 21 | 536 | 560 | [mm9:18:21142222-21142246:+] | 0.5514 | 123 | 0 | -12.57 | -0.9264 |
MIMAT0000216 | mmu-miR-187 | 67664 | Rnf125 | ggccgacguugUGUUCUGUGCu | | :||||||| | uuaacagauggAAGAGACACGa | 2 | 12 | 221 | 242 | [mm9:18:21141907-21141928:+] | 0.5596 | 143 | 7 | -16.91 | -0.2391 |
MIMAT0000225 | mmu-miR-195 | 67664 | Rnf125 | cgguuaUAAAGAC-ACGACGAu | |||| | ||||||| | cguaccAUUUAAGAUGCUGCUu | 2 | 16 | 30 | 51 | [mm9:18:21141716-21141737:+] | 0.6246 | 150 | 7 | -13.97 | -0.6375 |
MIMAT0000233 | mmu-miR-200b | 67664 | Rnf125 | agUAGUA-AUGGUCCGUCAUAAu | | ||| |||:| ||||||| | gaAACAUGUACUA--CAGUAUUa | 2 | 21 | 87 | 107 | [mm9:18:21141773-21141793:+] | 0.6374 | 156 | 7 | -14.25 | -1.1140 |
MIMAT0000237 | mmu-miR-204 | 67664 | Rnf125 | ucCGUAUCCUACUGUUUCCCUu | | | |||| | ||||||| | auGAAAAGGAGG--AAAGGGAa | 2 | 21 | 459 | 478 | [mm9:18:21142145-21142164:+] | 0.5811 | 153 | 7 | -17.43 | -0.7927 |
MIMAT0000526 | mmu-miR-15a | 67664 | Rnf125 | guGUUUGGU-AAUAC-ACGACGAu | |: |||| ||| | ||||||| | cuCGUACCAUUUAAGAUGCUGCUu | 2 | 21 | 28 | 51 | [mm9:18:21141714-21141737:+] | 0.6246 | 162 | 7 | -19.68 | -0.6412 |
MIMAT0000527 | mmu-miR-16 | 67664 | Rnf125 | gcgguuaUAAAUGC-ACGACGAu | ||||| | ||||||| | ucguaccAUUUAAGAUGCUGCUu | 2 | 16 | 29 | 51 | [mm9:18:21141715-21141737:+] | 0.6246 | 158 | 7 | -16.26 | -0.6375 |
MIMAT0000546 | mmu-miR-103 | 67664 | Rnf125 | agUAUCGGGACAUGUUACGACGa | :|| || | || :||||||| | ucGUA-CCAUUUAAGAUGCUGCu | 2 | 22 | 29 | 50 | [mm9:18:21141715-21141736:+] | 0.6246 | 159 | 7 | -20.00 | -0.4888 |
MIMAT0000548 | mmu-miR-322 | 67664 | Rnf125 | agguuuUGUACUUAACGACGAc | |: | |: ||||||| | cguaccAUUUAAGAUGCUGCUu | 2 | 17 | 30 | 51 | [mm9:18:21141716-21141737:+] | 0.6246 | 148 | 7 | -14.12 | -0.6486 |
MIMAT0000567 | mmu-miR-329 | 67664 | Rnf125 | uuuuuccAAUCGACCCACACAa | ||||: |||||| | guguccaUUAGUGAUGUGUGUa | 2 | 16 | 275 | 296 | [mm9:18:21141961-21141982:+] | 0.5699 | 123 | 6 | -11.43 | -0.2075 |
MIMAT0000647 | mmu-miR-107 | 67664 | Rnf125 | acUAUCGGGACAUGUUACGACGa | :|| || | || :||||||| | ucGUA-CCAUUUAAGAUGCUGCu | 2 | 22 | 29 | 50 | [mm9:18:21141715-21141736:+] | 0.6246 | 159 | 7 | -16.65 | -0.4888 |
MIMAT0000657 | mmu-miR-200c | 67664 | Rnf125 | aggUAGUA-AUGGGCCGUCAUAAu | | ||| |||: ||||||| | agaAACAUGUACU--ACAGUAUUa | 2 | 21 | 86 | 107 | [mm9:18:21141772-21141793:+] | 0.6374 | 148 | 7 | -13.96 | -1.1310 |
MIMAT0000668 | mmu-miR-211 | 67664 | Rnf125 | ucCGUUUCCUACUGUUUCCCUu | | |||||| | ||||||| | auGAAAAGGAGG--AAAGGGAa | 2 | 21 | 459 | 478 | [mm9:18:21142145-21142164:+] | 0.5811 | 161 | 7 | -19.39 | -0.7891 |
MIMAT0004684 | mmu-miR-362-3p | 67664 | Rnf125 | acuUAGGAACUUG-UCCACACAa | :||| | |:: | |||||| | uguGUCCAUUAGUGAUGUGUGUa | 2 | 20 | 274 | 296 | [mm9:18:21141960-21141982:+] | 0.5699 | 126 | 6 | -11.88 | -0.2094 |
MIMAT0000739 | mmu-miR-375 | 67664 | Rnf125 | agUGCGCUCGGCUUGCUUGUUu | ||| ||| || |||||| | agACG-GAG--AAAGGAACAAa | 2 | 21 | 363 | 381 | [mm9:18:21142049-21142067:+] | 0.5811 | 123 | 6 | -16.53 | -0.1794 |
MIMAT0000741 | mmu-miR-377 | 67664 | Rnf125 | uguuuucaacggaaACACACua | |||||| | guguccauuagugaUGUGUGua | 3 | 9 | 275 | 296 | [mm9:18:21141961-21141982:+] | 0.5699 | 120 | 0 | -11.14 | -0.1825 |
MIMAT0000747 | mmu-miR-382 | 67664 | Rnf125 | gcUUAGGUGGUG-C-UUGUUGAAg | ||| :| :|| | |||||||| | auAAUAUAAUACUGCAACAACUUc | 2 | 21 | 522 | 545 | [mm9:18:21142208-21142231:+] | 0.5514 | 158 | 7 | -16.98 | -0.5290 |
MIMAT0001076 | mmu-miR-384-3p | 67664 | Rnf125 | uaacacuuguUAAAGAUCCUUa | || ||||||| | ------uuuuAUGACUAGGAAg | 2 | 13 | 1 | 16 | [mm9:18:21141687-21141702:+] | 0.6928 | 144 | 7 | -11.75 | -0.4894 |
MIMAT0001533 | mmu-miR-448 | 67664 | Rnf125 | uacCCUGUAGGAUG-UAU-ACGUu | | |||| ||: ||| |||| | auaGUACAUAAUAUAAUACUGCAa | 2 | 20 | 515 | 538 | [mm9:18:21142201-21142224:+] | 0.5514 | 122 | 0 | -10.53 | -1.1578 |
MIMAT0001537 | mmu-miR-429 | 67664 | Rnf125 | ugccGUA-AUGGUCUGUCAUAAu | ||| |||: |||||||| | gaaaCAUGUACU--ACAGUAUUa | 2 | 19 | 87 | 107 | [mm9:18:21141773-21141793:+] | 0.6374 | 154 | 7 | -14.50 | -1.1310 |
MIMAT0003128 | mmu-miR-485 | 67664 | Rnf125 | cuuAAGUAGUGC-C-G-GUCGGAGa | || | |||| | | ||||||| | cauUUAACCACGAGACACAGCCUCu | 2 | 20 | 190 | 214 | [mm9:18:21141876-21141900:+] | 0.5596 | 152 | 7 | -23.59 | -0.4822 |
MIMAT0003374 | mmu-miR-302b | 67664 | Rnf125 | gaUGAUUUUGUACCUUCGU-GAAu | :||| : |||| |||| ||| | ugGCUAUGUGAUGG-AGCAGCUUc | 2 | 22 | 250 | 272 | [mm9:18:21141936-21141958:+] | 0.5647 | 123 | 0 | -13.24 | -0.2450 |
MIMAT0003727 | mmu-miR-374 | 67664 | Rnf125 | gugaaucguccaacaUAAUAUa | |||||| | auccaauuuagccaaAUUAUAg | 2 | 8 | 497 | 518 | [mm9:18:21142183-21142204:+] | 0.5662 | 120 | 6 | -6.95 | -0.1110 |
MIMAT0003453 | mmu-miR-497 | 67664 | Rnf125 | auGUUUGGU--GUCACACGACGAc | |: |||| :| ||||||| | cuCGUACCAUUUAAGAUGCUGCUu | 2 | 21 | 28 | 51 | [mm9:18:21141714-21141737:+] | 0.6246 | 147 | 7 | -17.05 | -0.6523 |
MIMAT0003456 | mmu-miR-495 | 67664 | Rnf125 | uucuucACGUGGUACAAACAAa | ||| :::| |||||| | auuaccUGC-UUGUCUUUGUUa | 2 | 17 | 104 | 124 | [mm9:18:21141790-21141810:+] | 0.6374 | 122 | 6 | -6.96 | -0.1417 |
MIMAT0004854 | mmu-miR-876-5p | 67664 | Rnf125 | aucacuaagugucucUUUAGGu | |||||| | aauuugaagucaccaAAAUCCa | 2 | 8 | 480 | 501 | [mm9:18:21142166-21142187:+] | 0.5811 | 120 | 6 | -12.74 | -0.1200 |
MIMAT0004869 | mmu-miR-421 | 67664 | Rnf125 | cgcgGGUUAAUUACA-GAC-AACUa | ||| |||| | ||| |||| | cguaCCAUUUAAGAUGCUGCUUGAa | 2 | 20 | 30 | 54 | [mm9:18:21141716-21141740:+] | 0.6246 | 126 | 0 | -14.39 | -0.4233 |
MIMAT0005850 | mmu-miR-1192 | 67664 | Rnf125 | uuaaACCAG-ACAAACAA-ACAAa | || |: | |||||| |||| | uaccUGCUUGUCUUUGUUAUGUUg | 2 | 19 | 106 | 129 | [mm9:18:21141792-21141815:+] | 0.6374 | 125 | 0 | -8.26 | -0.8830 |