SNP - dbSNP |
dbSNP | Type | Alleles | Het | Se(het) | Fxn-class | Gene Name | Assembly | Chr-pos | Sequence | Entrez Gene |
rs4230848 | snp | A/G | 0.48 | 0.0979796 | utr-variant-3-prime, nc-transcript-variant | Gga1, LOC102632079 | GRCm38.p3 | 15:78894585 | GACAAGAGCAGCTAA[A/G]CCAGGAAAAAAGTCA | 106039 |
rs4230849 | snp | A/G | 0.32 | 0.24 | utr-variant-3-prime, nc-transcript-variant | Gga1, LOC102632079 | GRCm38.p3 | 15:78894514 | CCTACTTGACCACAG[A/G]AGGGTGGGCAGATGT | 106039 |
rs4230850 | snp | C/T | 0.32 | 0.24 | utr-variant-3-prime, nc-transcript-variant | Gga1, LOC102632079 | GRCm38.p3 | 15:78894492 | GGCAGATGTGAGGTG[C/T]TCCCGGGAGGCCCCA | 106039 |
rs4230851 | snp | C/G | 0.32 | 0.24 | utr-variant-3-prime, nc-transcript-variant | Gga1, LOC102632079 | GRCm38.p3 | 15:78894431 | GGGAGTTCCATGGCC[C/G]TCCAGGGGGCATGTC | 106039 |
rs4230852 | snp | C/T | 0.32 | 0.24 | utr-variant-3-prime, nc-transcript-variant | Gga1, LOC102632079 | GRCm38.p3 | 15:78894335 | GCCCCGGGGGCTGAG[C/T]GGAGAGCTCCTTCAG | 106039 |
rs13461022 | snp | G/T | 0.48 | 0.0979796 | utr-variant-3-prime, downstream-variant-500B | Gga1, LOC102632079 | GRCm38.p3 | 15:78894168 | AGGCCCAGCCATAAC[G/T]TGGAGGCCATGCTGG | 106039 |
rs13461023 | snp | C/T | | | utr-variant-3-prime, downstream-variant-500B | Gga1, LOC102632079 | GRCm38.p3 | 15:78894041 | GGAGCAGGGAGGGGC[C/T]GTATGCCCTGGAAGG | 106039 |
rs31566767 | snp | A/G | 0.231111 | 0.249285 | intron-variant | Gga1 | Mm_Celera | 15:78885052 | AAGGAACTACTGTTT[A/G]CAAGTTATATATATT | 106039 |
rs31566769 | snp | C/T | 0.459184 | 0.136902 | intron-variant | Gga1 | Mm_Celera | 15:78885445 | TGTGGAGGTGGCATC[C/T]TGTGTGGAGCCGGCT | 106039 |
rs31566771 | snp | A/G | 0.142012 | 0.225474 | intron-variant | Gga1 | Mm_Celera | 15:78886027 | TGTGCGTGTGTGTAC[A/G]TATGATGTCCTATAG | 106039 |
rs31566773 | snp | G/T | 0.32 | 0.24 | intron-variant | Gga1 | Mm_Celera | 15:78886099 | GCTCAGAGGCTGATA[G/T]TTAGAGGGAAGTAGC | 106039 |
rs31567695 | snp | A/G | 0.408163 | 0.193609 | intron-variant | Gga1 | Mm_Celera | 15:78887249 | TGACCGCAGGAAAAG[A/G]AACGATCAAGGCCAC | 106039 |
rs31567697 | snp | A/G | 0.244898 | 0.249948 | intron-variant | Gga1 | Mm_Celera | 15:78887390 | GAAATCTCCCAGCTC[A/G]CTAATGACAGCAGCA | 106039 |
rs31567699 | snp | A/T | 0.231111 | 0.249285 | intron-variant | Gga1 | Mm_Celera | 15:78887427 | CTTTCCACGTTTTAA[A/T]AGTGTGTGCCCCACC | 106039 |
rs31567701 | snp | A/G | 0.459184 | 0.136902 | intron-variant | Gga1 | Mm_Celera | 15:78887626 | ATGTGAGGCTGCCAA[A/G]CACAAGCCTACCTCC | 106039 |
rs31567703 | snp | C/T | 0.124444 | 0.216185 | synonymous-codon | Gga1 | Mm_Celera | 15:78888155 | GCGGGTGAATGCCAT[C/T]GAGGAGGTCAACAAC | 106039 |
rs31568525 | snp | C/T | 0.32 | 0.24 | intron-variant | Gga1 | GRCm38.p3 | 15:78888687 | TCCTGTGCAGGCATC[C/T]TATCTGCCCAGGAGG | 106039 |
rs31568527 | snp | A/G | 0.32 | 0.24 | intron-variant | Gga1 | GRCm38.p3 | 15:78888761 | TCACAGCCCCAGTGT[A/G]TCACATCACCCCTTC | 106039 |
rs31568529 | snp | C/T | 0.231111 | 0.249285 | synonymous-codon | Gga1 | GRCm38.p3 | 15:78889070 | GCAGCTGGTCCGGGG[C/T]GAGGAGGTCAACGGT | 106039 |
rs31568531 | snp | C/T | 0.32 | 0.24 | synonymous-codon | Gga1 | GRCm38.p3 | 15:78889088 | GGAGGTCAACGGTGA[C/T]GCCACAGCCAGCTCC | 106039 |
rs31568533 | snp | A/G | 0.32 | 0.24 | intron-variant | Gga1 | GRCm38.p3 | 15:78889456 | TTTGGGTATGAGAGC[A/G]GCAGCCATATCTTAA | 106039 |
rs31569205 | snp | G/T | 0.32 | 0.24 | intron-variant | Gga1 | GRCm38.p3 | 15:78889564 | TAAGCAAAGCTGGTT[G/T]ATTGTGAACAAAAGA | 106039 |
rs31569207 | snp | A/G | 0.231111 | 0.249285 | synonymous-codon, upstream-variant-2KB | Gga1, Mir6955 | GRCm38.p3 | 15:78889855 | CCTGCTTGATGACGA[A/G]CTCATGTCTCTGGGT | 106039 |
rs31569209 | snp | C/T | 0.244898 | 0.249948 | intron-variant, upstream-variant-2KB | Gga1, Mir6955 | GRCm38.p3 | 15:78889984 | CGAGCAGCATGGCTT[C/T]CCTATTCTGGGTGAA | 106039 |
rs31569211 | snp | C/T | 0.495868 | 0.0452663 | intron-variant, upstream-variant-2KB | Gga1, Mir6955 | GRCm38.p3 | 15:78891174 | CCTGCTCTTAGCTGC[C/T]GAGGGCCCAAGGTGA | 106039 |
rs31569213 | snp | A/G | 0.48 | 0.0979796 | intron-variant, upstream-variant-2KB | Gga1, Mir6955 | GRCm38.p3 | 15:78891185 | CTGCCGAGGGCCCAA[A/G]GTGAAAGTTCCAACT | 106039 |
rs31569975 | snp | A/G | 0.336735 | 0.234472 | intron-variant, upstream-variant-2KB | Gga1, Mir6955 | GRCm38.p3 | 15:78891249 | ACGGAGAGGAAGTTA[A/G]TGTGGGCTGCAAGGT | 106039 |
rs31569977 | snp | C/T | 0.489796 | 0.070696 | intron-variant, upstream-variant-2KB | Gga1, Mir6955 | GRCm38.p3 | 15:78891271 | CTGCAAGGTGGCTGC[C/T]GGGATGATGCTTTCT | 106039 |
rs31569979 | snp | A/G | 0.473373 | 0.11227 | intron-variant, upstream-variant-2KB | Gga1, Mir6955 | GRCm38.p3 | 15:78891588 | GAGAGGTGACAGGCA[A/G]GTGGGTCCTGGGACA | 106039 |
rs31569981 | snp | C/T | 0.244898 | 0.249948 | intron-variant, upstream-variant-2KB | Gga1, Mir6955 | GRCm38.p3 | 15:78891604 | GTGGGTCCTGGGACA[C/T]GGCAGTACCATCCCA | 106039 |
rs31569983 | snp | A/G | 0.32 | 0.24 | intron-variant, upstream-variant-2KB | Gga1, Mir6955 | GRCm38.p3 | 15:78891809 | TCTATTATCCTCTCT[A/G]CTGTACCTCTCTCAG | 106039 |
rs31570784 | snp | C/T | 0.231111 | 0.249285 | synonymous-codon, downstream-variant-500B | Gga1, Mir6955 | GRCm38.p3 | 15:78892022 | AGCGGCCTGGACGAC[C/T]TGGACCTCTTGGGGA | 106039 |
rs31570786 | snp | G/T | 0.231111 | 0.249285 | intron-variant | Gga1 | GRCm38.p3 | 15:78892428 | CCACTACAAAATCAC[G/T]TGCTAATACACTGTC | 106039 |
rs31570787 | snp | C/G | 0.32 | 0.24 | intron-variant | Gga1 | GRCm38.p3 | 15:78893036 | AGAATGCATGACCCA[C/G]ACTTTGAACAGAGCC | 106039 |
rs31570789 | snp | C/T | 0.244898 | 0.249948 | intron-variant | Gga1 | GRCm38.p3 | 15:78893493 | TGGGAAGGGAGCTGC[C/T]TCTGCTGTGGTGGCT | 106039 |
rs31570790 | snp | C/T | 0.444444 | 0.157135 | intron-variant | Gga1 | GRCm38.p3 | 15:78893679 | CTGACGTGGCAGTGC[C/T]CCAGGGTGGCGCTAA | 106039 |
rs31570792 | snp | A/C | 0.124444 | 0.216185 | synonymous-codon, downstream-variant-500B | Gga1, LOC102632079 | GRCm38.p3 | 15:78893751 | GAAGGTTCGCCTCCG[A/C]TACAAGCTCATCTTC | 106039 |
rs31571784 | snp | A/C | 0.124444 | 0.216185 | utr-variant-3-prime, nc-transcript-variant | Gga1, LOC102632079 | GRCm38.p3 | 15:78894384 | GCTCTCAGGCTCCCA[A/C]GGGCCATGGAAACTT | 106039 |
rs31571785 | snp | C/T | 0.32 | 0.24 | downstream-variant-500B, nc-transcript-variant | Gga1, LOC102632079 | GRCm38.p3 | 15:78894586 | GACTTTTTTCCTGGA[C/T]TAGCTGCTCTTGTCA | 106039 |
rs31571786 | snp | G/T | 0.489796 | 0.070696 | downstream-variant-500B, nc-transcript-variant | Gga1, LOC102632079 | GRCm38.p3 | 15:78894827 | GGAGGTCTGGCTGCT[G/T]CAGAAGTCAAGGGGA | 106039 |
rs31571787 | snp | C/T | 0.244898 | 0.249948 | downstream-variant-500B, nc-transcript-variant | Gga1, LOC102632079 | GRCm38.p3 | 15:78894890 | GCAGCCGGTCTTGTG[C/T]TTCTCCCTGCCCGAC | 106039 |
rs31571789 | snp | C/T | 0.32 | 0.24 | downstream-variant-500B, nc-transcript-variant | Gga1, LOC102632079 | GRCm38.p3 | 15:78894914 | GCCCGACACACGGCT[C/T]TCTCCAAAGCCCTGC | 106039 |
rs31571791 | snp | C/T | 0.124444 | 0.216185 | downstream-variant-500B, nc-transcript-variant | Gga1, LOC102632079 | GRCm38.p3 | 15:78894952 | CTACTCTTCACCCGG[C/T]GTGGTAAAAGGCTGG | 106039 |
rs45780045 | snp | G/T | | | upstream-variant-2KB | Gga1 | GRCm38.p3 | 15:78875339 | ggcgggaagcagtgt[G/T]cattccacactctct | 106039 |
rs45792305 | snp | A/G | | | intron-variant | Gga1 | GRCm38.p3 | 15:78878607 | GGTTGATTGGTGGTT[A/G]GAAGGAGACAGTGAC | 106039 |
rs45938022 | snp | G/T | | | upstream-variant-2KB | Gga1 | GRCm38.p3 | 15:78875718 | GTAGCTGGAGATGTC[G/T]CTCAGTTGGTAGCGT | 106039 |
rs45966445 | snp | C/T | | | intron-variant | Gga1 | GRCm38.p3 | 15:78893689 | AGTGCCCCAGGGTGG[C/T]GCTAACCTCCCTTCC | 106039 |
rs45987147 | snp | C/T | | | intron-variant | Gga1 | GRCm38.p3 | 15:78879627 | CACCCACAAGGTTCC[C/T]GGGATAGATTGGTAC | 106039 |
rs46001773 | snp | A/T | | | upstream-variant-2KB | Gga1 | GRCm38.p3 | 15:78876578 | TTCCCCATCACCTTG[A/T]GAGTGTTACGTGCTT | 106039 |
rs46005111 | snp | A/G | | | upstream-variant-2KB | Gga1 | GRCm38.p3 | 15:78876985 | CTTCAGGACTGCCAG[A/G]GCAAGACAGTGAGCC | 106039 |
rs46144458 | snp | C/T | | | intron-variant | Gga1 | GRCm38.p3 | 15:78879250 | GTGGGGTCATGTCTC[C/T]TCCAGTTCTAAGATC | 106039 |
rs46174362 | snp | A/G | | | intron-variant | Gga1 | GRCm38.p3 | 15:78892814 | AACCCTGACCCCCTC[A/G]TTCCCAGGGAGGGCA | 106039 |
rs46269678 | snp | A/G | | | intron-variant | Gga1 | Mm_Celera | 15:78885783 | GACCATTTCACAGAG[A/G]GGTCCCACACACAGT | 106039 |
rs46325074 | snp | C/T | | | intron-variant | Gga1 | GRCm38.p3 | 15:78880884 | GCCCACTGATCCCAC[C/T]GGAAGGTCAGTGCTC | 106039 |
rs46431853 | snp | A/T | | | intron-variant | Gga1 | GRCm38.p3 | 15:78878920 | GCTCAGCCTGCTCTC[A/T]TATAGAACCAAGACT | 106039 |
rs46514386 | snp | C/T | | | synonymous-codon, downstream-variant-500B | Gga1, Mir6955 | GRCm38.p3 | 15:78892009 | TCCACCAACGAGCAG[C/T]GGCCTGGACGACCTG | 106039 |
rs46577148 | snp | G/T | | | intron-variant | Gga1 | GRCm38.p3 | 15:78880761 | CAGCGTGAGAGATGG[G/T]AAAGTCAGCGTAGTG | 106039 |
rs46632470 | snp | A/G | | | intron-variant | Gga1 | GRCm38.p3 | 15:78880967 | ACCCCTCTTAACTGC[A/G]CCAGTTGCAGGACAG | 106039 |
rs46779864 | snp | A/G | | | intron-variant | Gga1 | Mm_Celera | 15:78886404 | GGAAGGGAAGAATCA[A/G]TTTTCACAAGTGCCC | 106039 |
rs46783089 | snp | C/T | | | intron-variant | Gga1 | Mm_Celera | 15:78887707 | ATGCCTTTAAAGGCC[C/T]GGACCCACACACTGG | 106039 |
rs46945337 | snp | A/G | | | intron-variant | Gga1 | GRCm38.p3 | 15:78889144 | GGCTCTGGGGGGCCC[A/G]GGTGCGGGGCGGCAT | 106039 |
rs47156381 | snp | G/T | | | intron-variant | Gga1 | GRCm38.p3 | 15:78886672 | GATGTTAATATGTTT[G/T]TTTTTTTGTTTTTTT | 106039 |
rs47245797 | snp | A/G | | | intron-variant | Gga1 | GRCm38.p3 | 15:78882551 | CACCACTGCCCGACC[A/G]TAGGACACATGTTAA | 106039 |
rs47273124 | snp | A/G | | | upstream-variant-2KB | Gga1 | GRCm38.p3 | 15:78876066 | GCGCCACCACTGCCC[A/G]GCCTGCAGTTGGGTT | 106039 |
rs47371218 | snp | C/G | | | intron-variant | Gga1 | GRCm38.p3 | 15:78881355 | TTACCGGGACATGAG[C/G]AGTCCTACACCTGGT | 106039 |
rs47379383 | snp | A/G | | | intron-variant | Gga1 | GRCm38.p3 | 15:78880805 | GGAGGCCGTCCCTGG[A/G]TGTAGTCTCTGAGGA | 106039 |
rs47390346 | snp | G/T | | | upstream-variant-2KB | Gga1 | GRCm38.p3 | 15:78875325 | GTGAGTGGAGAAAGG[G/T]CGGGAAGCAGTGTGC | 106039 |
rs47400003 | snp | C/T | | | upstream-variant-2KB | Gga1 | GRCm38.p3 | 15:78876894 | GCGTGGTGGCACACT[C/T]CTTTAATGTCTGCAC | 106039 |
rs47449461 | snp | A/G | | | intron-variant | Gga1 | GRCm38.p3 | 15:78881264 | GGCTTCAGGGGTGCC[A/G]CCCCCTTGAGGGGAG | 106039 |
rs47739007 | snp | C/G | | | intron-variant | Gga1 | GRCm38.p3 | 15:78878508 | GAAGCCAGCCTCGAA[C/G]GAAGTTGAACTGGAA | 106039 |
rs47790171 | snp | A/G | | | intron-variant | Gga1 | Mm_Celera | 15:78884995 | GGATTAAAGGCGTGC[A/G]CCACCACCGCCCGGC | 106039 |
rs47896452 | snp | A/T | | | upstream-variant-2KB | Gga1 | GRCm38.p3 | 15:78875961 | ggttttgttctgtgt[A/T]gccctgggtcctgga | 106039 |
rs47906703 | snp | C/T | | | upstream-variant-2KB | Gga1 | GRCm38.p3 | 15:78875417 | CTTGATTTCTCCTCC[C/T]CTTGAATTGTGGGAA | 106039 |
rs48084533 | snp | C/G | | | intron-variant | Gga1 | GRCm38.p3 | 15:78878407 | CCCAGAGAAGCCTTC[C/G]GGTCTATCCTCAAGC | 106039 |
rs48189477 | snp | G/T | | | intron-variant | Gga1 | GRCm38.p3 | 15:78879241 | GGGAAAGGGGTGGGG[G/T]CATGTCTCTTCCAGT | 106039 |
rs48231196 | snp | C/T | | | intron-variant | Gga1 | Mm_Celera | 15:78886335 | AGCAAGATGGCTCTA[C/T]AGGTATAGATATCCG | 106039 |
rs48329896 | snp | A/G | | | intron-variant | Gga1 | Mm_Celera | 15:78886755 | GATCAGGCTGGCCTC[A/G]AACTCAGAAATCTGC | 106039 |
rs48332840 | snp | A/C | | | upstream-variant-2KB | Gga1 | GRCm38.p3 | 15:78876659 | TCTGATAAGTGCGGG[A/C]GTTATCATCACCTTG | 106039 |
rs48370797 | snp | G/T | | | intron-variant | Gga1 | GRCm38.p3 | 15:78882654 | AGACCACATAGGATC[G/T]GTAGACCCTGAACTT | 106039 |
rs48371264 | snp | C/T | | | intron-variant | Gga1 | Mm_Celera | 15:78886590 | GGTGGCTGTCCTCTG[C/T]ATCCCCCAAACATAT | 106039 |
rs48542079 | snp | A/G | | | intron-variant | Gga1 | GRCm38.p3 | 15:78893090 | GGCTCCAGGGTGGGC[A/G]TCCTGCCTCTAAGAG | 106039 |
rs48587971 | snp | A/G | | | intron-variant | Gga1 | GRCm38.p3 | 15:78884455 | ATGCTTGCCTAGCAT[A/G]CACGAAGCTCTGCCT | 106039 |
rs48771128 | snp | C/T | | | intron-variant | Gga1 | GRCm38.p3 | 15:78883975 | CAGCTCCACCAGGCC[C/T]CTTGCAGGGCCTATG | 106039 |
rs48802643 | snp | A/G | | | upstream-variant-2KB | Gga1 | GRCm38.p3 | 15:78875682 | CAGCTTGGGCTATAA[A/G]GACTCTAGATGGAGG | 106039 |
rs49068853 | snp | A/T | | | downstream-variant-500B, nc-transcript-variant | Gga1, LOC102632079 | GRCm38.p3 | 15:78894829 | AGGTCTGGCTGCTGC[A/T]GAAGTCAAGGGGAAG | 106039 |
rs49069268 | snp | C/T | | | upstream-variant-2KB | Gga1 | GRCm38.p3 | 15:78876589 | CTTGAGAGTGTTACG[C/T]GCTTTGAGATACGAT | 106039 |
rs49430977 | snp | C/T | | | intron-variant | Gga1 | GRCm38.p3 | 15:78882351 | TGATGGCAGGGATTC[C/T]TTAACTCACACACAA | 106039 |
rs49847499 | snp | G/T | | | upstream-variant-2KB | Gga1 | GRCm38.p3 | 15:78875215 | TCGATGAGCTGCTGC[G/T]CGTGCCTCAGGAGGA | 106039 |
rs49960345 | snp | A/G | | | intron-variant | Gga1 | GRCm38.p3 | 15:78881567 | CCTGGGTGATAGAAC[A/G]CTCCGCACAGTGAGC | 106039 |
rs50036506 | snp | A/G | | | intron-variant | Gga1 | GRCm38.p3 | 15:78882033 | GGCATGTGCTTCACA[A/G]GGCCAGTAGAGGGCT | 106039 |
rs50263917 | snp | C/T | | | intron-variant | Gga1 | GRCm38.p3 | 15:78880530 | CCTGAGCAGAGCGGC[C/T]CTCAGCCTGGGCAGC | 106039 |
rs50269545 | snp | C/T | | | intron-variant | Gga1 | Mm_Celera | 15:78886742 | AACTCACCCTGTAGA[C/T]CAGGCTGGCCTCGAA | 106039 |
rs50683809 | snp | A/C | | | upstream-variant-2KB | Gga1 | GRCm38.p3 | 15:78875698 | GACTCTAGATGGAGG[A/C]AGAAGTAGCTGGAGA | 106039 |
rs51079585 | snp | A/G | | | intron-variant | Gga1 | GRCm38.p3 | 15:78880920 | TGGGGGTGTCCAGCA[A/G]GAAGTGGAGGGAATC | 106039 |
rs51164168 | snp | A/G | | | intron-variant | Gga1 | Mm_Celera | 15:78886225 | AACTCCAGAGGCTGA[A/G]GCAGGAGGATCCTGA | 106039 |
rs51164886 | snp | C/T | | | intron-variant | Gga1 | Mm_Celera | 15:78886734 | TGTCCTGGAACTCAC[C/T]CTGTAGATCAGGCTG | 106039 |
rs51241765 | snp | A/G | | | upstream-variant-2KB | Gga1 | GRCm38.p3 | 15:78875637 | CTGCCTAACATGTTT[A/G]TATGAAATGCTAGGT | 106039 |
rs51340145 | snp | C/T | | | intron-variant | Gga1 | Mm_Celera | 15:78885965 | GGCTGGCCTGGTGTA[C/T]AGGGGTAGAAGGGAT | 106039 |
rs51349120 | snp | C/T | | | intron-variant | Gga1 | Mm_Celera | 15:78886928 | CAGCACTTGGGAGGC[C/T]GAGGCAGGAGGAATT | 106039 |
rs51429961 | snp | A/T | | | intron-variant | Gga1 | Mm_Celera | 15:78887024 | TCTCAAGACAGAAAA[A/T]TTTCAAAAGGTGTTG | 106039 |