DNA & RNA Element - AREsite Gene Name Motif CDS Area ARE Area Evidence Rfwd3; Rnf201 ATTTA 43-2367 2418-2422;2620-2624;3336-3340;4059-4063

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004523 mmu-miR-29b* 234736 Rfwd3 auuuGGUG-GUAUACUUUG-GUCg :||: | ||| |||| ||| ucuuUCAUGCCUAUCAAACUCAGc 2 19 1122 1145 [mm9:8:113795775-113795798:-] 0.5468 121 0 -12.83 -0.6250 MIMAT0004524 mmu-miR-30b* 234736 Rfwd3 cugCAUUUGUAGGUGUAGGGUc | || | ::|||||||| gugGCAACAAGUUACAUCCCAg 2 20 557 578 [mm9:8:113796342-113796363:-] 0.5678 155 7 -24.14 -0.3889 MIMAT0004527 mmu-miR-124* 234736 Rfwd3 uaGUUCCAGGCGACACUUG-UGc ::||||: || ||||| || uuUGAGGUUAGC-CUGAACUACu 2 21 322 343 [mm9:8:113803439-113803460:-] 0.5002 122 0 -12.22 -0.3578 MIMAT0004527 mmu-miR-124* 234736 Rfwd3 uagUUCCAGGCGAC-ACUU-GUGc :| ||:| :|| |||| ||| ucaGAUGUUCUUUGAUGAAGCACu 2 20 1079 1102 [mm9:8:113795818-113795841:-] 0.5468 122 0 -12.83 -0.9524 MIMAT0004529 mmu-miR-125b* 234736 Rfwd3 uccaggguUCUUGGACUGAACa ||:|: ||||||| gcaggguuAGGAUAUGACUUGc 2 15 1660 1681 [mm9:8:113795239-113795260:-] 0.5595 154 7 -19.68 -0.1036 MIMAT0004529 mmu-miR-125b* 234736 Rfwd3 uccaggguucuuggACUGAACa ||||||| ucauaaccuuucagUGACUUGa 2 9 471 492 [mm9:8:113796428-113796449:-] 0.5864 140 7 -12.27 -0.5406 MIMAT0000137 mmu-miR-126-5p 234736 Rfwd3 gcgcAUGGUUUUC-AU-UAUUAc |:|::||:| || ||||| ucaaUGCUGAAGGAUAGAUAAUu 2 18 800 822 [mm9:8:113796098-113796120:-] 0.4735 124 0 -7.06 -0.1197 MIMAT0000143 mmu-miR-9* 234736 Rfwd3 ugaaagccaauagAUCGAAAUa |||||||| auauguaaaggcaUAGCUUUAa 2 10 639 660 [mm9:8:113796260-113796281:-] 0.4904 145 7 -8.90 -0.4049 MIMAT0000143 mmu-miR-9* 234736 Rfwd3 ugaaagccaauagaUCGAAAUa ||||||| uaaaacuuaaaguaAGCUUUAa 2 9 1273 1294 [mm9:8:113795626-113795647:-] 0.4910 140 7 -6.71 -0.8664 MIMAT0000143 mmu-miR-9* 234736 Rfwd3 ugaaagccAAUAGAUCG-AAAUa ||:|| ||| |||| gucccaaaUUGUCCAGCAUUUAg 2 15 952 974 [mm9:8:113795946-113795968:-] 0.4953 122 0 -7.46 -0.1965 MIMAT0000152 mmu-miR-140* 234736 Rfwd3 ggcaccAAGAUGGGACAC-CAu | ||::|||||| || aauaucUGCUGUCCUGUGUGUg 2 16 2010 2031 [mm9:8:113794889-113794910:-] 0.5528 123 0 -20.11 -0.3745 MIMAT0004533 mmu-miR-141* 234736 Rfwd3 agGUUGUGACGUGACCU-UCUAc |||::||| | ||| |||| guCAAUGCUGAA--GGAUAGAUa 2 21 799 819 [mm9:8:113796101-113796121:-] 0.4870 125 0 -14.88 -0.3774 MIMAT0000217 mmu-miR-188-5p 234736 Rfwd3 gggaGGUGGUACGUUCCCUAc |::||| ||||||||| uguaCUGCCA-GCAAGGGAUu 2 18 1159 1178 [mm9:8:113795742-113795761:-] 0.5468 163 7 -23.34 -0.1910 MIMAT0000367 mmu-miR-291a-5p 234736 Rfwd3 ucucucccggagguGAAACUAc ||||||| uucucucagauguuCUUUGAUg 2 9 1074 1095 [mm9:8:113795825-113795846:-] 0.5468 140 7 -13.78 -0.3337 MIMAT0004573 mmu-miR-293* 234736 Rfwd3 guUUUACAGU-GUGU-CAAACUCa :|: ||:| ||:: ||||||| auGAGGGUUACCAUGUGUUUGAGg 2 21 305 328 [mm9:8:113803454-113803477:-] 0.5002 154 7 -14.40 -0.1979 MIMAT0004575 mmu-miR-295* 234736 Rfwd3 cuucacACGGGGUGUAAA-CUCa ||:|| :||||| ||| ccaaauUGUCCAGCAUUUAGAGg 2 17 955 977 [mm9:8:113795943-113795965:-] 0.4953 128 0 -14.87 -0.2010 MIMAT0004575 mmu-miR-295* 234736 Rfwd3 cuUCA--CACGGGGUGUAA-ACUCa ||| || | :::|||| |||| gcAGUAAGUUCAUUGCAUUGUGAGa 2 21 668 692 [mm9:8:113796228-113796252:-] 0.5675 123 0 -12.45 -0.2014 MIMAT0004616 mmu-miR-30c-1* 234736 Rfwd3 ccUCAUUUGUUGGGAGAGGGUc |||:| : : ::||||||| ucAGUGACUUGAUUUCUCCCAu 2 21 481 502 [mm9:8:113796418-113796439:-] 0.5724 156 7 -17.37 -0.5303 MIMAT0005438 mmu-miR-30c-2* 234736 Rfwd3 ucUCAUUUGUCGGAAGAGGGUc |||:| : | :|||||||| ucAGUGACUUGAUUUCUCCCAu 2 21 481 502 [mm9:8:113796418-113796439:-] 0.5724 164 7 -17.61 -0.5303 MIMAT0004617 mmu-miR-148a* 234736 Rfwd3 ucagCCUCACAGAGUC-UUGAAa | || ||||| ||||| aaagGAAGACACUCAGAAACUUc 2 19 919 941 [mm9:8:113795979-113796001:-] 0.4953 122 0 -14.45 -0.2312 MIMAT0004628 mmu-miR-21* 234736 Rfwd3 cuGUCGGGUAGCUGACGACAAc ||| : :| ||||||| acCAGGAUUGUGUGUGCUGUUg 2 21 155 176 [mm9:8:113796744-113796765:-] 0.5623 144 7 -17.82 -0.1008 MIMAT0004628 mmu-miR-21* 234736 Rfwd3 cuGUC-GGGUAGCUGACGA-CAAc ||| |:|| || ||||| ||| ugCAGACUCACCG-CUGCUAGUUa 2 21 17 39 [mm9:8:113796881-113796903:-] 0.4801 129 0 -19.68 -0.1846 MIMAT0004633 mmu-miR-27a* 234736 Rfwd3 acgAGUGUUCGUCGAUUCGGGa ||| |||: :||||||| aaaUCA-AAGUCUUUAAGCCCu 2 20 236 256 [mm9:8:113803526-113803546:-] 0.4999 157 7 -18.86 -0.8358 MIMAT0004634 mmu-miR-31* 234736 Rfwd3 cuACCGUUAUACA--ACCGUAUCGu | || |||||| |||||||| gcUAGCCAUAUGUAAAGGCAUAGCu 2 22 632 656 [mm9:8:113796264-113796288:-] 0.5338 168 7 -20.47 -0.4114 MIMAT0000558 mmu-miR-325* 234736 Rfwd3 ugugaAUGACUCGUGGAUGAUCc ||: | ::|||||||| ccaggUAUCCA-UGCCUACUAGa 2 19 575 596 [mm9:8:113796324-113796345:-] 0.5773 148 7 -13.49 -0.4640 MIMAT0000569 mmu-miR-330* 234736 Rfwd3 agAGACGUCCGGGACACGAAACg ||||:: | | ||||||| cuUCUGUGAG--AUAUGCUUUGu 2 22 538 558 [mm9:8:113796362-113796382:-] 0.5583 150 7 -16.91 -0.2312 MIMAT0000569 mmu-miR-330* 234736 Rfwd3 agagacguccgggACACGAAACg | ||||||| cagguuauauuugUCUGCUUUGc 2 11 984 1006 [mm9:8:113795914-113795936:-] 0.5468 142 7 -17.68 -0.1127 MIMAT0004647 mmu-miR-338-5p 234736 Rfwd3 guGAGUCGUGGUCCUAUA-ACAa || |||| : ||||| ||| ccCUGAGCA--GAGAUAUCUGUu 2 21 67 87 [mm9:8:113796833-113796853:-] 0.5438 121 0 -12.34 -0.1299 MIMAT0000605 mmu-miR-350 234736 Rfwd3 cuuUCACAUACC-CGAA-ACACUu ||||| ||| ||| ||||| cccAGUGUCUGGUACUUCUGUGAg 2 20 524 547 [mm9:8:113796373-113796396:-] 0.5583 134 0 -18.88 -0.4118 MIMAT0004670 mmu-miR-7a* 234736 Rfwd3 auACCGUCUG-ACACUAAACAAc | | |||: ||| ||||||| auUUGAAGAUGUGUAAUUUGUUu 2 21 1244 1266 [mm9:8:113795654-113795676:-] 0.5092 163 7 -10.68 -0.7554 MIMAT0001093 mmu-miR-411* 234736 Rfwd3 ccAAUCACC-UGGCACAAUGUAu || |||| | | ||||||| gcUUUGUGGCAACAAGUUACAUc 2 21 552 574 [mm9:8:113796346-113796368:-] 0.5678 159 7 -12.14 -0.1480 MIMAT0002104 mmu-miR-463* 234736 Rfwd3 uacUACC-UGUUGUUUAAUC-CAu |||| || :::||||| || aucAUGGUUCAUUGGAUUAGUGUg 2 20 113 136 [mm9:8:113796784-113796807:-] 0.5623 122 0 -14.02 -0.1670 MIMAT0002110 mmu-miR-469 234736 Rfwd3 ccugugguucuaguuacuUUCUCCGu ||||||| accuuuaaacccagccucAAGAGGCa 2 9 116 141 [mm9:8:113803641-113803666:-] 0.4991 140 7 -18.58 -0.3768 MIMAT0002889 mmu-miR-532-5p 234736 Rfwd3 ugccaGGAUGUGAGUUCCGUAc ||| |||||||||| agacaCCUUGUCUCAAGGCAUa 2 18 1038 1059 [mm9:8:113795861-113795882:-] 0.5468 161 7 -22.01 -0.1375 MIMAT0002889 mmu-miR-532-5p 234736 Rfwd3 ugcCAGGAUGUGAGUUCCGUAc | | ||:: | ||||||| cuaGCCAUAUG-UAAAGGCAUa 2 20 633 653 [mm9:8:113796267-113796287:-] 0.5338 149 7 -14.41 -0.4247 MIMAT0002889 mmu-miR-532-5p 234736 Rfwd3 ugcCAGGAUGUGAGUUCC-GUAc | |:|:| :| |||| ||| uauGACUUGCCUUGAAGGACAUu 2 20 1672 1694 [mm9:8:113795226-113795248:-] 0.5595 123 0 -13.84 -0.2515 MIMAT0003129 mmu-miR-485* 234736 Rfwd3 cucuccUCUCGGCACAU-ACUGa || |:||||| |||| ucuuuaAGCCCUGUGUAGUGACu 2 17 245 267 [mm9:8:113803515-113803537:-] 0.4999 124 0 -16.52 -0.2406 MIMAT0003189 mmu-miR-291b-5p 234736 Rfwd3 ccucucccggagguGAAACUAg ||||||| uucucucagauguuCUUUGAUg 2 9 1074 1095 [mm9:8:113795825-113795846:-] 0.5468 140 7 -11.79 -0.3337 MIMAT0003373 mmu-miR-302b* 234736 Rfwd3 ucUUUCGUAAG---GGU-ACAAUUUCa :|:|::||: | | |||||||| aaGAGGUGUUUGGGCAAUUGUUAAAGa 2 22 706 732 [mm9:8:113796188-113796214:-] 0.5660 151 7 -11.63 -0.8657 MIMAT0003375 mmu-miR-302c* 234736 Rfwd3 cgUCCAUUGG---GGU-ACAAUUUCg ||||: :: | | |||||||| agAGGUGUUUGGGCAAUUGUUAAAGa 2 21 707 732 [mm9:8:113796188-113796213:-] 0.5660 146 7 -14.13 -0.8622 MIMAT0003376 mmu-miR-302c 234736 Rfwd3 ggugacuuugUACCUUCGUGAa || |||||||| auguucuuugAU-GAAGCACUa 2 13 1083 1103 [mm9:8:113795817-113795837:-] 0.5468 146 7 -12.72 -0.9171 MIMAT0003376 mmu-miR-302c 234736 Rfwd3 ggugACU-UUGUACCUUC-GUGAa ||| |: | ||||| |||| uaggUGACAGAAAGGAAGACACUc 2 19 909 932 [mm9:8:113795988-113796011:-] 0.4953 125 0 -14.01 -0.1232 MIMAT0004820 mmu-miR-744* 234736 Rfwd3 ucCAACUCCAAUCACCGUUGUc | | | || ||||||||| gaGAUAUGCUUUGUGGCAACAa 2 21 545 566 [mm9:8:113796354-113796375:-] 0.5583 160 7 -14.18 -0.6526 MIMAT0004820 mmu-miR-744* 234736 Rfwd3 ucCA-ACUCCAAUCACCGUUGUc || | | | | ||||||| uuGUCUCAAGGCAUAGGCAACAu 2 21 1045 1067 [mm9:8:113795853-113795875:-] 0.5468 143 7 -12.53 -0.2913 MIMAT0003734 mmu-miR-667 234736 Rfwd3 gaacccgacccACCGUCCACAGu || ||||||| aauaaagaauuUGUAAGGUGUC- 2 13 2055 2076 [mm9:8:113794844-113794865:-] 0.5528 144 7 -10.89 -0.9075 MIMAT0004822 mmu-miR-770-5p 234736 Rfwd3 gcaccgGGUCUGUGCAC-CACGa ||||: :||| |||| gagacaCCAGGAUUGUGUGUGCu 2 17 150 172 [mm9:8:113796748-113796770:-] 0.5623 120 0 -22.10 -0.1393 MIMAT0003892 mmu-miR-762 234736 Rfwd3 cgagaCAGGGCC---GGGGUCGGGg || || | ::||||||| agcagGUACCUGUAAUUCCAGCCCc 2 18 433 457 [mm9:8:113803325-113803349:-] 0.5002 144 7 -29.23 -0.1809 MIMAT0003477 mmu-miR-669a 234736 Rfwd3 ugUACUUGUACGUGUGUGU-UGa || |:|| || ||||| || acAUAAGCAGCCAGACACAUACc 2 21 96 118 [mm9:8:113803664-113803686:-] 0.4850 128 0 -14.80 -0.7896 MIMAT0003741 mmu-miR-674* 234736 Rfwd3 aacaagacUCUACCCUCGACAc ||:| ||||||| caagaggcAGGU-AGAGCUGUu 2 15 133 153 [mm9:8:113803629-113803649:-] 0.4991 144 7 -15.93 -0.5688 MIMAT0003741 mmu-miR-674* 234736 Rfwd3 aacaagacucuaccCUCGACAc ||||||| uuugcucuaccacuGAGCUGUa 2 9 1824 1845 [mm9:8:113795075-113795096:-] 0.5024 140 7 -11.88 -0.4770 MIMAT0003451 mmu-miR-677 234736 Rfwd3 aguCUUCGAUUAGUAGUGACUu | :|: | :|||||||| aguGUGGUCAUGUAUCACUGAg 2 20 131 152 [mm9:8:113796768-113796789:-] 0.5623 151 7 -15.85 -0.2844 MIMAT0003459 mmu-miR-682 234736 Rfwd3 gucuGAAGUGACACUGAC-GUc || ::: ||||||| || agccCUGUGUAGUGACUGACAc 2 18 251 272 [mm9:8:113803510-113803531:-] 0.5002 121 0 -11.70 -0.2041 MIMAT0003466 mmu-miR-687 234736 Rfwd3 aguaaCGACG-UAAGGUCCUAUc ||| | |||:||||||| cuggaGCUUCGAUUUCAGGAUAg 2 18 1561 1583 [mm9:8:113795337-113795359:-] 0.5595 164 7 -22.22 -0.4114 MIMAT0003470 mmu-miR-691 234736 Rfwd3 aaaagACGGAGAGAAGUCCUUa || :| |: ||||||| ugaagUGGUUAUUCUCAGGAAg 2 18 866 887 [mm9:8:113796033-113796054:-] 0.4812 153 7 -13.97 -0.1635 MIMAT0003472 mmu-miR-693-5p 234736 Rfwd3 cuUUUGAAAG-CCUACACCGAc |:| || | | ||||||| ccAGAAUUCCAAGUUGUGGCUu 2 20 1203 1224 [mm9:8:113795696-113795717:-] 0.5468 150 7 -12.56 -0.7623 MIMAT0004189 mmu-miR-693-3p 234736 Rfwd3 aaUGUCGGUGUAGACUUUCGACg |::|||||| | ||||||| agAUGGCCACA-AUAAAAGCUGu 2 22 1618 1639 [mm9:8:113795281-113795302:-] 0.5595 167 7 -21.04 -0.2066 MIMAT0003487 mmu-miR-697 234736 Rfwd3 agaGGUG--UC-CUGGUCCU-ACAa :||| || ||||||| ||| guaUCACUGAGACACCAGGAUUGUg 2 19 142 166 [mm9:8:113796754-113796778:-] 0.5623 120 0 -18.06 -0.1790 MIMAT0003493 mmu-miR-703 234736 Rfwd3 aagaaaGGAAGACUUCCAAAa ||| | ||||||| ccucaaCCUGGUUAAGGUUUu 2 16 1805 1825 [mm9:8:113795095-113795115:-] 0.5138 151 7 -13.16 -0.1606 MIMAT0003494 mmu-miR-704 234736 Rfwd3 gaUCCUCGUCUCGUGUACAGa ||| :||: ||||||| caAGGCAUAGGCAACAUGUCu 2 20 1051 1071 [mm9:8:113795849-113795869:-] 0.5468 155 7 -20.68 -0.1017 MIMAT0003498 mmu-miR-708* 234736 Rfwd3 gaucuucgagugucAGAUCAAc ||||||| aagacuugaaauuuUCUAGUUa 2 9 729 750 [mm9:8:113796170-113796191:-] 0.5645 140 7 -9.61 -0.9657 MIMAT0003500 mmu-miR-710 234736 Rfwd3 gaGUUGAGAGGGGUUCUGAACc |||:| | : |||||||| ggCAAUUGU--UAAAGACUUGa 2 21 718 737 [mm9:8:113796183-113796202:-] 0.5645 153 7 -16.69 -1.0600 MIMAT0003502 mmu-miR-712 234736 Rfwd3 ccauggcgggcCCACUUCCUc | ||||||| ccaaagucaauGCUGAAGGAu 2 11 794 814 [mm9:8:113796106-113796126:-] 0.4995 142 7 -11.18 -0.1742 MIMAT0003502 mmu-miR-712 234736 Rfwd3 ccAUGGCGGGC-CCACUUCCUc ||: |::| ||||||| gaUAUGACUUGCCUUGAAGGAc 2 20 1670 1691 [mm9:8:113795229-113795250:-] 0.5595 142 7 -15.36 -0.2102 MIMAT0003510 mmu-miR-717 234736 Rfwd3 ucucuUCCAUAGAGACAGACUc ||| | | ||||||| ggcauAGGCAAC-AUGUCUGAu 2 18 1054 1074 [mm9:8:113795846-113795866:-] 0.5468 147 7 -12.56 -0.2816 MIMAT0003512 mmu-miR-450b-3p 234736 Rfwd3 uaCGUACGUUUUA-CAAGGGUUa | | | |:|| ||||||| cuGAAGGAUAGAUAAUUCCCAAg 2 21 806 828 [mm9:8:113796092-113796114:-] 0.4735 147 7 -10.20 -0.4281 MIMAT0003781 mmu-miR-676* 234736 Rfwd3 cgUUCAGG-AUUCCAACA-UCUCa ||||:| | : |||| |||| guAAGUUCAUUGCAUUGUGAGAGg 2 21 671 694 [mm9:8:113796226-113796249:-] 0.5675 123 0 -14.65 -0.4059 MIMAT0004237 mmu-miR-742 234736 Rfwd3 aaAUGGGUCGUACCACCGAAAg | || || | |||||||| aaUUCCAAG--UUGUGGCUUUa 2 21 1207 1226 [mm9:8:113795694-113795713:-] 0.5468 153 7 -16.38 -0.4402 MIMAT0004840 mmu-miR-743b-3p 234736 Rfwd3 agaUAAGUCGUACUAC-AGAAAg |||| : |||| ||||| cugAUUCUCUCAGAUGUUCUUUg 2 20 1070 1092 [mm9:8:113795828-113795850:-] 0.5468 123 0 -11.25 -0.6563 MIMAT0004841 mmu-miR-871 234736 Rfwd3 guacUGACCGUGAUUAGACUUAu |:||| |:| ||||||| gggcAUUGGGAUU--UCUGAAUa 2 20 1993 2013 [mm9:8:113794907-113794927:-] 0.5528 156 7 -19.42 -0.6851 MIMAT0004841 mmu-miR-871 234736 Rfwd3 guACU-GACCGUGAUU-AGACUUAu ||| || : | || ||||||| uuUGACCUAUUUCCAAGUCUGAAUg 2 22 445 469 [mm9:8:113796451-113796475:-] 0.5635 151 7 -14.48 -0.2012 MIMAT0004863 mmu-miR-220 234736 Rfwd3 uuCACAGA-CUGU-GACA-CCACc ||| || || | |||| |||| uaGUGGCUAGAGAUCUGUAGGUGa 2 20 892 915 [mm9:8:113796005-113796028:-] 0.4882 125 0 -18.82 -0.3959 MIMAT0004867 mmu-miR-327 234736 Rfwd3 uaGGAGUACGG---GGAGUUCa |:|:| || ||||||| acCUUUAAACCCAGCCUCAAGa 2 18 116 137 [mm9:8:113803645-113803666:-] 0.4991 144 7 -16.84 -0.4289 MIMAT0004892 mmu-miR-568 234736 Rfwd3 cacacauAUGUAA-AUAUGUa || ||| |||||| uuuuacuUAAAUUCUAUACAg 2 14 217 237 [mm9:8:113796683-113796703:-] 0.4971 121 6 -5.21 -0.5806 MIMAT0004898 mmu-miR-654-3p 234736 Rfwd3 uuccacuaccagUCGUCUGUAu ||:|||||| caaagacagaaaAGUAGACAUa 2 11 394 415 [mm9:8:113803367-113803388:-] 0.5002 134 6 -14.26 -0.1206 MIMAT0004938 mmu-miR-875-3p 234736 Rfwd3 guaUCGGAGUCAUAAAAG-UCc || ||:: |||||| || uaaAGACUUGAAAUUUUCUAGu 2 19 727 748 [mm9:8:113796172-113796193:-] 0.5645 122 0 -6.01 -0.4546 MIMAT0004940 mmu-miR-511 234736 Rfwd3 acucacGUCUCGUUUUCCGUa || | ||||||| gcuagcCAUAUGUAAAGGCAu 2 16 632 652 [mm9:8:113796268-113796288:-] 0.5338 143 7 -10.63 -0.2181 MIMAT0005849 mmu-miR-1191 234736 Rfwd3 auCCCGAUGUAUCA-UUCUGAc |||| |: |: | |||||| uuGGGCAAU-UGUUAAAGACUu 2 20 715 735 [mm9:8:113796185-113796205:-] 0.5645 121 6 -12.33 -0.5105 MIMAT0005856 mmu-miR-1195 234736 Rfwd3 acUCGUCCGACCG-----GAGCUUGAGu || || ||||| ||||||||| ucAGGAGCCUGGCUUUUACUCGAACUCa 2 22 762 789 [mm9:8:113796131-113796158:-] 0.5140 164 7 -31.33 -0.4863 MIMAT0009397 mmu-miR-1933-3p 234736 Rfwd3 uaucAGUGUGACUACCAGGACc | :|||| | ||||||| auccUAGCACUCAGGGUCCUGa 2 19 278 299 [mm9:8:113803483-113803504:-] 0.5002 162 7 -19.48 -0.3946 MIMAT0009400 mmu-miR-1936 234736 Rfwd3 cggucaagugucgucCAGUCAAu ||||||| aaccuaaauugucuuGUCAGUUa 2 9 307 329 [mm9:8:113796591-113796613:-] 0.5406 140 7 -13.35 -0.5924 MIMAT0009418 mmu-miR-669l 234736 Rfwd3 ugUAUAUGUACGUGUGUGU-UGa ||| :|| || ||||| || acAUAAGCAGCCAGACACAUACc 2 21 96 118 [mm9:8:113803664-113803686:-] 0.4850 128 0 -14.53 -0.7933 MIMAT0009422 mmu-miR-1951 234736 Rfwd3 aucgguguggUCAG-AGGUGAUg |||| ||||||| uacaggagagAGUCUUCCACUAa 2 13 389 411 [mm9:8:113796509-113796531:-] 0.5406 151 7 -17.52 -0.5776 MIMAT0009422 mmu-miR-1951 234736 Rfwd3 auCGGUGUGGUCAGAGGUGAUg ||| :| |||||||| uuGCCUUAGGCUACUCCACUAa 2 21 1003 1024 [mm9:8:113795896-113795917:-] 0.5468 148 7 -18.77 -0.2905 MIMAT0009426 mmu-miR-1955 234736 Rfwd3 uuuUCGACGUCACGUAGGACCCUGa | |||: | ||| ||||||| gauAUCUGU-UUACAUGCUGGGACu 2 23 78 101 [mm9:8:113796819-113796842:-] 0.5623 160 7 -24.41 -0.1208 MIMAT0009427 mmu-miR-669n 234736 Rfwd3 uguguGUAGGUGUG-UGUUUa || || ||| ||||| aaggcCACCCUCACUACAAAg 2 16 1381 1401 [mm9:8:113795519-113795539:-] 0.4952 123 0 -13.98 -0.1379 MIMAT0009431 mmu-miR-1958 234736 Rfwd3 ugAAUG-ACGAAGGUGAAA-GGAu |||: | : ||::|||| ||| ggUUAUAUUUGUCUGCUUUGCCUu 2 21 986 1009 [mm9:8:113795911-113795934:-] 0.5468 123 0 -12.32 -0.1020 MIMAT0009432 mmu-miR-1959 234736 Rfwd3 gagGUGACUCGAUGUAGGGg || ||:|||||||| uggCAACAAGUUACAUCCCa 2 18 558 577 [mm9:8:113796343-113796362:-] 0.5678 157 7 -20.96 -0.7647 MIMAT0009435 mmu-miR-1962 234736 Rfwd3 uacacagggucacGGUCGGAGa |||||||| cauaccuuuaaacCCAGCCUCa 2 10 113 134 [mm9:8:113803648-113803669:-] 0.4991 145 7 -18.51 -0.5688 MIMAT0009442 mmu-miR-1969 234736 Rfwd3 ugGGUACAAUUUCAGAGGUAGAa |:||| ||| |||||| agCUAUG-UAACUAGACCAUCUc 2 22 196 217 [mm9:8:113803565-113803586:-] 0.4996 123 6 -15.23 -0.1078 MIMAT0009445 mmu-miR-1274a 234736 Rfwd3 accgcggacuuGUCCCUGGACu ::|||||||| cucagcuauuuUGGGGACCUGu 2 12 1140 1161 [mm9:8:113795759-113795780:-] 0.5468 147 7 -19.84 -0.1842 MIMAT0011210 mmu-miR-2134 234736 Rfwd3 cguggggcaaaGGGUUCUg ||||||| acuaaggccaaCCCAAGAu 2 9 484 502 [mm9:8:113803280-113803298:-] 0.5000 140 7 -14.52 -0.3122 MIMAT0012774 mmu-miR-664 234736 Rfwd3 auccgaccccUCAUUUACUUAu ||||||||||| ucucaaaguaAGUAAAUGAAUa 2 13 214 235 [mm9:8:113803547-113803568:-] 0.4996 160 7 -13.62 -1.2298 MIMAT0015645 mmu-miR-3473 234736 Rfwd3 ccgacuCGGUAGAGAGGu ||| ||||||| aaagucGCCUUCUCUCCc 2 13 1489 1506 [mm9:8:113795414-113795431:-] 0.5101 152 7 -16.07 -0.1846 MIMAT0015646 mmu-miR-3474 234736 Rfwd3 cuuagGUGCAGAGGAGGGUCCc || ||: | ||||||| ggcaaCAAGUUACAUCCCAGGu 2 18 559 580 [mm9:8:113796340-113796361:-] 0.5678 157 7 -16.82 -0.3614 MIMAT0000124 mmu-miR-15b 234736 Rfwd3 acaUUUGGUACUACAC-GACGAu |::::|| || || ||||| cucAGGUUAU-AUUUGUCUGCUu 2 20 982 1003 [mm9:8:113795917-113795938:-] 0.5468 121 0 -13.47 -0.2155 MIMAT0000128 mmu-miR-30a 234736 Rfwd3 gaaggucagcuccuACAAAUGu ||||||| ugagcagagauaucUGUUUACa 2 9 70 91 [mm9:8:113796829-113796850:-] 0.5438 140 7 -11.68 -0.3154 MIMAT0000130 mmu-miR-30b 234736 Rfwd3 ucGACUCACAUC-CU--ACAAAUGu ||||| || | ||||||| ccCUGAGCAGAGAUAUCUGUUUACa 2 21 67 91 [mm9:8:113796829-113796853:-] 0.5438 146 7 -16.10 -0.3101 MIMAT0000135 mmu-miR-125a-5p 234736 Rfwd3 aguguccaauuucccaGAGUCCCu ||||||| accuguaauccuagcaCUCAGGGu 2 9 271 294 [mm9:8:113803488-113803511:-] 0.5002 140 7 -15.09 -0.1440 MIMAT0004528 mmu-miR-125a-3p 234736 Rfwd3 ccgAGGGUUCUUGGAG-UGGACa | || ||:||||| ||||| gagUGCC-AGGACCUCAACCUGg 2 20 1794 1815 [mm9:8:113795105-113795126:-] 0.5138 133 0 -25.31 -0.1057 MIMAT0000136 mmu-miR-125b-5p 234736 Rfwd3 aguguucaaucccaGAGUCCCu ||||||| cuguaauccuagcaCUCAGGGu 2 9 273 294 [mm9:8:113803488-113803509:-] 0.5002 140 7 -14.94 -0.1426 MIMAT0000142 mmu-miR-9 234736 Rfwd3 agUAUGUCGAUCU-AUUGGUUUCu :||::| || |:||||||| caGUAUGGACCGAUUGACCAAAGa 2 22 1882 1905 [mm9:8:113795015-113795038:-] 0.5024 156 7 -17.43 -0.4838 MIMAT0000144 mmu-miR-132 234736 Rfwd3 gcugguaCCG-ACAUCU-GACAAu ||| ||||| ||||| cucaagaGGCAGGUAGAGCUGUUa 2 16 131 154 [mm9:8:113803628-113803651:-] 0.4991 122 0 -18.94 -0.4849 MIMAT0000150 mmu-miR-138 234736 Rfwd3 gcCGGACUAAGUGUUGUGGUCGa ||: | || :|:||||||| ggGCUCUAGUCUUAGCACCAGCa 2 22 1940 1962 [mm9:8:113794958-113794980:-] 0.5176 161 7 -24.28 -0.3950 MIMAT0000155 mmu-miR-142-3p 234736 Rfwd3 agGUAUUUCAUC-CUUUGUG-AUGu ||| ||| || |:|||| ||| uaCAU-AAGCAGCCAGACACAUACc 2 22 95 118 [mm9:8:113803664-113803687:-] 0.4850 126 0 -12.49 -0.7933 MIMAT0000158 mmu-miR-146a 234736 Rfwd3 uugggUACCUUAAGUCAAGAGu ||| | | ||||||| uuaggAUGCACGU-AGUUCUCu 2 18 55 75 [mm9:8:113803707-113803727:-] 0.5109 147 7 -14.37 -0.8125 MIMAT0000164 mmu-miR-154 234736 Rfwd3 gcUUCCG--UUGUGCCUAUUGGAu ||| | ||::| ||||||| ccAAGUCUGAAUGCUCAUAACCUu 2 21 457 480 [mm9:8:113796440-113796463:-] 0.5864 155 7 -10.40 -0.3087 MIMAT0000211 mmu-miR-182 234736 Rfwd3 gccacacUCA-AGAUGG-UAAC-GGUUu ||| | ||| |||| |||| gauucacAGUAUGGACCGAUUGACCAAa 2 19 1876 1903 [mm9:8:113795017-113795044:-] 0.5024 120 0 -13.49 -0.3794 MIMAT0000214 mmu-miR-185 234736 Rfwd3 agUCCUU--GACGGAAAGAGAGGu ||||| : ||| |||||||| agAGGAAAGUCGCC-UUCUCUCCc 2 21 1484 1506 [mm9:8:113795414-113795436:-] 0.5101 161 7 -24.25 -0.1812 MIMAT0000224 mmu-miR-194 234736 Rfwd3 aggUGUACCUCAACGACAAUGu :|| | || |||||||| gagGCAGGUAG-AGCUGUUACa 2 20 136 156 [mm9:8:113803626-113803646:-] 0.4991 153 7 -18.00 -0.5677 MIMAT0000237 mmu-miR-204 234736 Rfwd3 ucCGUAUCCUACU-GUUUCCCUu |:: : |:||| ||||||| uuGUGAGAGGUGAGGAAAGGGAa 2 21 685 707 [mm9:8:113796213-113796235:-] 0.5675 151 7 -18.15 -0.2751 MIMAT0000247 mmu-miR-143 234736 Rfwd3 cucgaugucacgaaGUAGAGu |||||| cuauguaacuagacCAUCUCa 2 8 198 218 [mm9:8:113803564-113803584:-] 0.4996 120 6 -11.34 -0.2066 MIMAT0000247 mmu-miR-143 234736 Rfwd3 cucgaugucacGAAGUAGAGu ||||||||| auugcaagaaaCUUCAUCUCu 2 11 1913 1933 [mm9:8:113794987-113795007:-] 0.5176 150 7 -17.00 -0.5746 MIMAT0000248 mmu-miR-30e 234736 Rfwd3 gaagGUCAGUUCCUACAAAUGu ||| | ||||||| ugagCAGAGAUAUCUGUUUACa 2 19 70 91 [mm9:8:113796829-113796850:-] 0.5438 142 7 -11.59 -0.3101 MIMAT0000366 mmu-miR-290-5p 234736 Rfwd3 uuUCACGGGGGUAU-CAAACUCa || |:: ||||: ||||||| ugAGGGUUACCAUGUGUUUGAGg 2 21 306 328 [mm9:8:113803454-113803476:-] 0.5002 163 7 -18.85 -0.1997 MIMAT0000369 mmu-miR-292-5p 234736 Rfwd3 guuUUCUCGGGGGU---CAAACUCa :||:|:: ||| ||||||| cauGAGGGUUACCAUGUGUUUGAGg 2 20 304 328 [mm9:8:113803454-113803478:-] 0.5002 154 7 -18.51 -0.1997 MIMAT0000381 mmu-miR-34c 234736 Rfwd3 cgUUAGUCGAUUGAUGUGACGGa | || |||| ||||||| cuACUCCACUAA-GCCACUGCCc 2 22 1013 1034 [mm9:8:113795886-113795907:-] 0.5468 151 7 -15.71 -0.1061 MIMAT0000382 mmu-miR-34b-5p 234736 Rfwd3 ugUUAGUCGAUUAAUGUGACGGa | || |||| ||||||| cuACUCCACUAA-GCCACUGCCc 2 22 1013 1034 [mm9:8:113795886-113795907:-] 0.5468 151 7 -16.78 -0.1061 MIMAT0000513 mmu-miR-19b 234736 Rfwd3 agucaaAACGUACCUAAA-CGUGu |||||| ||||| |||| uuaacgUUGCAUUGAUUUAGCACc 2 18 37 60 [mm9:8:113796860-113796883:-] 0.5253 141 0 -16.04 -0.2421 MIMAT0000514 mmu-miR-30c 234736 Rfwd3 cgACUC-UCAC-AUCCUACAAAUGu |||| || | || ||||||| ccUGAGCAGAGAUA-UCUGUUUACa 2 22 68 91 [mm9:8:113796829-113796852:-] 0.5438 149 7 -16.87 -0.3101 MIMAT0000515 mmu-miR-30d 234736 Rfwd3 gaaggucagccccuACAAAUGu ||||||| ugagcagagauaucUGUUUACa 2 9 70 91 [mm9:8:113796829-113796850:-] 0.5438 140 7 -11.59 -0.3154 MIMAT0000518 mmu-miR-196a 234736 Rfwd3 gggUUGUUGUACUUUG-AUGGAu |:||:| || || ||||| auaAGCAGCCAGACACAUACCUu 2 20 98 120 [mm9:8:113803662-113803684:-] 0.4850 127 0 -14.92 -0.6263 MIMAT0000526 mmu-miR-15a 234736 Rfwd3 guGUUUGGUAAUACAC-GACGAu ||::::| ||| || ||||| cuCAGGUUA-UAUUUGUCUGCUu 2 21 982 1003 [mm9:8:113795917-113795938:-] 0.5468 126 0 -16.95 -0.2135 MIMAT0000527 mmu-miR-16 234736 Rfwd3 gcGGUUAUAAAUGCAC-GACGAu :||: | ||: || ||||| gcUCAGGUUAUAUUUGUCUGCUu 2 21 981 1003 [mm9:8:113795917-113795939:-] 0.5468 120 0 -12.12 -0.2039 MIMAT0000533 mmu-miR-26a 234736 Rfwd3 ucggAUAGGACCUAAU-GAACUu | |:|| | ||| ||||| gaaaUUUUCUAG-UUAGCUUGAg 2 19 736 757 [mm9:8:113796163-113796184:-] 0.5392 120 0 -9.05 -0.5600 MIMAT0000534 mmu-miR-26b 234736 Rfwd3 uggAUAGGACUUAAU-GAACUu | |:|| |:||| ||||| aaaUUUUCU-AGUUAGCUUGAg 2 19 737 757 [mm9:8:113796163-113796183:-] 0.5392 124 0 -11.10 -0.5600 MIMAT0000538 mmu-miR-31 234736 Rfwd3 gucgauacggUCGUAGAACGGa :| |||||||| aguacccuugGGAAUCUUGCCu 2 13 187 208 [mm9:8:113796712-113796733:-] 0.4971 148 7 -17.19 -0.3445 MIMAT0000542 mmu-miR-34a 234736 Rfwd3 uguuGGUCGAUUCUGUGACGGu ||| ||||| ||||||| uacuCCA-CUAAGCCACUGCCc 2 19 1014 1034 [mm9:8:113795886-113795906:-] 0.5468 168 7 -23.85 -0.1072 MIMAT0000548 mmu-miR-322 234736 Rfwd3 agGUUUUGUACUUAAC-GACGAc ||:: :|| | ||| ||||| cuCAGGUUAU-AUUUGUCUGCUu 2 21 982 1003 [mm9:8:113795917-113795938:-] 0.5468 122 0 -12.19 -0.2116 MIMAT0000609 mmu-miR-351 234736 Rfwd3 guccgaguuucccgagGAGUCCCu ||||||| accuguaauccuagcaCUCAGGGu 2 9 271 294 [mm9:8:113803488-113803511:-] 0.5002 140 7 -17.18 -0.1440 MIMAT0000651 mmu-miR-19a 234736 Rfwd3 agucaaAACGUAUCUAAA-CGUGu |||||| ||||| |||| uuaacgUUGCAUUGAUUUAGCACc 2 18 37 60 [mm9:8:113796860-113796883:-] 0.5253 141 0 -16.14 -0.2421 MIMAT0000659 mmu-miR-212 234736 Rfwd3 accggCACUGACC-UCU-GACAAu | |:| || ||| ||||| cucaaGAGGCAGGUAGAGCUGUUa 2 18 131 154 [mm9:8:113803628-113803651:-] 0.4991 120 0 -15.10 -0.4883 MIMAT0000664 mmu-miR-219 234736 Rfwd3 ucuUAACGCAA-A-CCUGUUAGu | || ||| | |||||||| uauAGUGAGUUCUAGGACAAUCa 2 19 172 194 [mm9:8:113803588-113803610:-] 0.4994 156 7 -16.06 -0.5578 MIMAT0000668 mmu-miR-211 234736 Rfwd3 ucCGUUUCCUACU-GUUUCCCUu |::|: |:||| ||||||| uuGUGAGAGGUGAGGAAAGGGAa 2 21 685 707 [mm9:8:113796213-113796235:-] 0.5675 159 7 -19.08 -0.2751 MIMAT0000671 mmu-miR-224 234736 Rfwd3 uugccUUGGUGA-UCACUGAAu |||| :| |||||||| cucauAACCUUUCAGUGACUUg 2 17 470 491 [mm9:8:113796429-113796450:-] 0.5864 159 7 -16.82 -0.5242 MIMAT0000677 mmu-miR-7a 234736 Rfwd3 ugUUGUUUUAGUGAUCAGAAGGu :|:| |: : |||||||| aaGAUACAGGAGAGAGUCUUCCa 2 22 385 407 [mm9:8:113796513-113796535:-] 0.5406 149 7 -20.00 -0.5369 MIMAT0000678 mmu-miR-7b 234736 Rfwd3 ugUUGUUUUAGUGUUCAGAAGGu :|:| |: : :|||||||| aaGAUACAGGAGAGAGUCUUCCa 2 22 385 407 [mm9:8:113796513-113796535:-] 0.5406 153 7 -21.00 -0.5369 MIMAT0000679 mmu-miR-217 234736 Rfwd3 aggucAGUCA-AGGACUACGU-CAu |:||| |: |||||| || uaaucUUAGUGUUAGGAUGCACGUa 2 19 44 68 [mm9:8:113803714-113803738:-] 0.5109 121 0 -15.38 -0.9012 MIMAT0000704 mmu-miR-361 234736 Rfwd3 caugGGGACCUCUAAGAC-UAUu | :|||: ||||| ||| agggCAUUGGGAUUUCUGAAUAu 2 19 1992 2014 [mm9:8:113794906-113794928:-] 0.5528 122 0 -14.45 -0.2591 MIMAT0000711 mmu-miR-365 234736 Rfwd3 uaUUCCUAAAAAU-CCCCGUAAu || || | | ||||||| uaAAAUCUUGUCAUAGGGCAUUg 2 21 1978 2000 [mm9:8:113794920-113794942:-] 0.5528 143 7 -12.24 -0.4419 MIMAT0004745 mmu-miR-384-5p 234736 Rfwd3 uguaaCGGAUCCUUA-ACAAAUGu || || || ||||||| ccugaGCAGAGAUAUCUGUUUACa 2 19 68 91 [mm9:8:113796829-113796852:-] 0.5438 149 7 -14.28 -0.3101 MIMAT0001076 mmu-miR-384-3p 234736 Rfwd3 uaacACUU-GUUA--AAGA-UCCUUa |||| :::| |||| ||||| aaaaUGAAGUGGUUAUUCUCAGGAAg 2 19 862 887 [mm9:8:113796033-113796058:-] 0.4812 120 0 -12.55 -0.3232 MIMAT0001081 mmu-miR-196b 234736 Rfwd3 gggUUGUUGUCCUUUG-AUGGAu |:||:| || || ||||| auaAGCAGCCAGACACAUACCUu 2 20 98 120 [mm9:8:113803662-113803684:-] 0.4850 127 0 -15.78 -0.6263 MIMAT0001091 mmu-miR-410 234736 Rfwd3 ugUCCGGUA-GA-CACAAUAUAa ||| :|| || ||||||| agAGG-UAUGCUCAGGUUAUAUu 2 20 973 994 [mm9:8:113795926-113795947:-] 0.5210 143 7 -13.38 -0.1776 MIMAT0001542 mmu-miR-449a 234736 Rfwd3 uggucGAUUGUUAUGUGACGGu | | :|| ||||||| cuacuCCACUAAGCCACUGCCc 2 18 1013 1034 [mm9:8:113795886-113795907:-] 0.5468 149 7 -17.48 -0.1061 MIMAT0003128 mmu-miR-485 234736 Rfwd3 cuuaaGUAGUGCCGGUCGGAGa | |:| |||||||| cauacCUUUAAACCCAGCCUCa 2 18 113 134 [mm9:8:113803648-113803669:-] 0.4991 149 7 -15.62 -0.5652 MIMAT0003168 mmu-miR-543 234736 Rfwd3 uucuucACGUG-GCGCUUACAAa ||| : | ||||||| uauccaUGCCUACUAGAAUGUUg 2 17 580 602 [mm9:8:113796318-113796340:-] 0.5773 143 7 -9.29 -0.5314 MIMAT0003169 mmu-miR-539 234736 Rfwd3 uguguGGUUCCU--AUUAAAGAGg :||: || |:||||||| accuuUCAGUGACUUGAUUUCUCc 2 18 476 499 [mm9:8:113796421-113796444:-] 0.5724 152 7 -16.57 -0.1350 MIMAT0003169 mmu-miR-539 234736 Rfwd3 ugUGUGGUUCCUAUUAA-AGAGg :|| || | |:||| |||| agGCAACAUGUCUGAUUCUCUCa 2 21 1059 1081 [mm9:8:113795839-113795861:-] 0.5468 124 0 -11.51 -0.6304 MIMAT0003188 mmu-miR-503 234736 Rfwd3 gaCGUCAUGACAAGGGCGACGAu |||| || | |||||||| uuGCAG-AC--UCACCGCUGCUa 2 22 16 35 [mm9:8:113796885-113796904:-] 0.4801 152 7 -28.65 -0.2042 MIMAT0003450 mmu-miR-488 234736 Rfwd3 cugguucuuUGUCGGAAAGUu |:| ||||||| ugaaugcucAUAACCUUUCAg 2 13 464 484 [mm9:8:113796436-113796456:-] 0.5864 148 7 -11.30 -0.4811 MIMAT0003453 mmu-miR-497 234736 Rfwd3 auGUUUGGUGUCACAC-GACGAc ||::::|:| | || ||||| cuCAGGUUAUA-UUUGUCUGCUu 2 21 982 1003 [mm9:8:113795917-113795938:-] 0.5468 122 0 -16.54 -0.2175 MIMAT0003456 mmu-miR-495 234736 Rfwd3 uuCUUCACGUGGUAC-AAACAAa || |||:| : || |||||| aaGAUGUGUAAUUUGUUUUGUUu 2 21 1249 1271 [mm9:8:113795649-113795671:-] 0.4716 132 6 -15.06 -0.6944 MIMAT0003460 mmu-miR-449c 234736 Rfwd3 ggucGAUCGUUACGUGACGGa | | :|| ||||||| uacuCCACUAAGCCACUGCCc 2 18 1014 1034 [mm9:8:113795886-113795906:-] 0.5468 149 7 -18.92 -0.1083 MIMAT0003475 mmu-miR-146b 234736 Rfwd3 ucggaUACCUUAAGUCAAGAGu ||| | | ||||||| uuaggAUGCACGU-AGUUCUCu 2 18 55 75 [mm9:8:113803707-113803727:-] 0.5109 147 7 -14.37 -0.8125 MIMAT0004847 mmu-miR-882 234736 Rfwd3 ugaUUACGCGAUUGAGAGAGGa || ||| :||||||| ggaAAGUCGC--CUUCUCUCCc 2 20 1487 1506 [mm9:8:113795414-113795433:-] 0.5101 144 7 -17.73 -0.1795 MIMAT0004889 mmu-miR-504 234736 Rfwd3 cuAUCUCACG-UC-UG-GUCCCAGa |: | | | || || ||||||| ccUGUAAUCCUAGCACUCAGGGUCc 2 21 272 296 [mm9:8:113803486-113803510:-] 0.5002 145 7 -17.72 -0.2063 MIMAT0004896 mmu-miR-590-3p 234736 Rfwd3 ugaUCGAAUAUGUAUUUUAau ||: ||: ||||||| guaAGUAAAUGAAUAAAAUca 3 19 221 241 [mm9:8:113803541-113803561:-] 0.4996 138 0 -5.02 -0.1305 MIMAT0005447 mmu-miR-449b 234736 Rfwd3 cgGUCGAUUGUUGUGACGGa || |||| : ||||||| ucCA-CUAA-GCCACUGCCc 2 19 1017 1034 [mm9:8:113795886-113795903:-] 0.5468 150 7 -19.68 -0.1061 MIMAT0004937 mmu-miR-875-5p 234736 Rfwd3 guggacuaUUUUGA--CUCCAUAu |: |:| ||||||| aauuguccAGCAUUUAGAGGUAUg 2 15 958 981 [mm9:8:113795939-113795962:-] 0.5210 141 7 -11.83 -0.2856

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G070731 Rfwd3 Mus musculus 234736

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Rfwd3 mcmv-miR-M44-1 beg:372 end:391 pic:3' TGGCGCCGAGACCT---TTTTCTAT 5'& .|||| |||||||| &5' ---------TTGGATGCAAAAGATA 3' Rfwd3 mmu-miR-693-3p beg:1620 end:1640 pic:3' AATGTCGGTGTAGACTTTCGACG 5'& .|||||| |||||||. &5' ----GGCCACAATA-AAAGCTGT 3' Rfwd3 mmu-miR-204 beg:689 end:708 pic:3' TCCGTATCCTACTGTTTCCCTT 5'& |||.. |||| ||||||| &5' AGGTG-AGGA-----AAGGGAA 3' Rfwd3 mmu-miR-532-5p beg:1040 end:1059 pic:3' TGCCAGGATGTGAGTTCCGTAC 5'& ||| |||||||||| &5' -----CCTTGTCTCAAGGCAT- 3' Rfwd3 mmu-miR-532-5p beg:634 end:653 pic:3' TGCCAGGATGTGAG-TTCCGTAC 5'& || |.|. ||||||| &5' -----CC-ATATGTAAAGGCAT- 3' Rfwd3 mmu-miR-188-5p beg:1160 end:1178 pic:3' GGGAGGTGGTACGTTCCCTAC 5'& | ||| ||||||||| &5' ----CTGCCA-GCAAGGGAT- 3' Rfwd3 mmu-miR-703 beg:1808 end:1826 pic:3' AAGAAAGGAAGACTTCCAAAA 5'& ||| |||||||| &5' ------CCTGGTTAAGGTTTT 3' Rfwd3 mmu-miR-1959 beg:558 end:577 pic:3' GAGGTGACTCGATGTAGGGG 5'& || ||.|||||||| &5' ---CAACAAGTTACATCCC- 3' Rfwd3 mmu-miR-710 beg:4 end:18 pic:3' GAGTTGAGAGGGGTTCTGAACC 5'& .|. ||||||| &5' ---------TCTTGAGACTTG- 3' Rfwd3 mmu-miR-9star beg:645 end:660 pic:3' TGAAAGCCAATAGATCGAAATA 5'& || |||||||| &5' ------GGCA---TAGCTTTA- 3' Rfwd3 mmu-miR-667 beg:2063 end:2075 pic:3' GAACCCGACCCACCGTCCACAGT 5'& || ||||||| &5' -----------TGTAAGGTGTC- 3' Rfwd3 mmu-miR-338-3p beg:84 end:98 pic:3' GTTGTTTTAGTGACTACGACCT 5'& |.|| |||||||. &5' --------TTAC--ATGCTGGG 3' Rfwd3 mmu-miR-34a beg:1015 end:1034 pic:3' TGTTGGTCGATTCTGTGACGGT 5'& ||| ||||| ||||||| &5' ----CCA-CTAAGCCACTGCC- 3' Rfwd3 mmu-miR-449a beg:1015 end:1034 pic:3' TGGTCGATTGTTATGTGACGGT 5'& ||| |||| ||||||| &5' -CCA-CTAAGC---CACTGCC- 3' Rfwd3 mmu-miR-449b beg:1015 end:1034 pic:3' CGGTCGATTGTTGTGACGGA 5'& ||| |||| ||||||| &5' -CCA-CTAAGC-CACTGCC- 3' Rfwd3 mmu-miR-449c beg:1015 end:1034 pic:3' GGTCGA-TCGTTACGTGACGGA 5'& ||| || ||| ||||||| &5' CCA-CTAAGC----CACTGCC- 3' Rfwd3 mmu-miR-34b-5p beg:1016 end:1034 pic:3' TGTTAGTCGATTAATGTGACGGA 5'& || |||| ||||||| &5' -----CA-CTAAGC-CACTGCC- 3' Rfwd3 mmu-miR-34c beg:1016 end:1034 pic:3' CGTTAGTCGATTGATGTGACGGA 5'& || |||| ||||||| &5' -----CA-CTAAGC-CACTGCC- 3' Rfwd3 mmu-miR-30bstar beg:559 end:577 pic:3' CTGCATTTGTA-GGTGTAGGGTC 5'& |||| ..||||||||| &5' ------AACAAGTTACATCCCAG 3' Rfwd3 mmu-miR-1892 beg:783 end:799 pic:3' TAGGAGGGAG-GGCAGGGGTTTA 5'& ||| || ||||||| &5' -------CTCACC--CCCCAAA- 3' Rfwd3 mmu-miR-325star beg:584 end:596 pic:3' TGTGAATGACTCGTGGATGATCC 5'& .|||||||| &5' -------------GCCTACTAG- 3' Rfwd3 mmu-miR-543 beg:583 end:602 pic:3' TTCTTCACG--TGGCGCTTACAAA 5'& ||| ||. ||||||| &5' ------TGCCTACTA-GAATGTT- 3' Rfwd3 mmu-miR-484 beg:763 end:774 pic:3' TAGCCCTCCCCTGACTCGGACT 5'& |||||||. &5' --------------GAGCCTGG 3' Rfwd3 mmu-miR-875-5p beg:971 end:981 pic:3' GTGGACTATTTTGACTCCATAT 5'& |||||||. &5' --------------GAGGTATG 3' Rfwd3 mcmv-miR-M23-2 beg:509 end:528 pic:3' GGCGAACTGGCTCCGGGGGTA 5'& |.|| || |. ||||||| &5' CTGC-TGTCT---GCCCCCA- 3' Rfwd3 mmu-miR-744star beg:1050 end:1067 pic:3' TCCAACTCCAATCACCGTTGTC 5'& ||| ||||||| &5' ------AGGCATA-GGCAACA- 3' Rfwd3 mmu-miR-744star beg:541 end:566 pic:3' TCCAACTCCAAT-----CACCGTTGTC 5'& |||| ||||||||| &5' ----TGAGATATGCTTTGTGGCAACA- 3' Rfwd3 mmu-miR-365 beg:1990 end:2001 pic:3' TATTCCTAAAAATCCCCGTAAT 5'& |||||||. &5' --------------GGGCATTG 3' Rfwd3 mmu-miR-224 beg:472 end:492 pic:3' TTGCCTTGGTGA-TCACTGAAT 5'& |||| ||||||||. &5' -----AACCTTTCAGTGACTTG 3' Rfwd3 mmu-miR-302bstar beg:714 end:732 pic:3' TCTTTCGTAAGGGTACAATTTCA 5'& ..||| |||||||| &5' ---GGGCAAT----TGTTAAAG- 3' Rfwd3 mcmv-miR-m22-1 beg:1777 end:1796 pic:3' ACCGGAGCCATGCCTGCCCCTT 5'& ||| |.|| || .||||.| &5' TGGA-TTGG---GG-TGGGGGA 3' Rfwd3 mcmv-miR-M23-2 beg:1501 end:1519 pic:3' GGCGAACTGGCTCCGGGGGTA 5'& || ||| |. |||||| &5' CC-CTTT-CTT---CCCCCA- 3' Rfwd3 mcmv-miR-m59-1 beg:506 end:518 pic:3' GACTGCCAGCTCCGTGACGATT 5'& ||||||||. &5' ------------GCACTGCTG- 3' Rfwd3 mghv-miR-M1-8 beg:511 end:535 pic:3' CTGGTT--TGGGGGTCACTCACGA 5'& .|.. .||||||||| || &5' -GCTGTCTGCCCCCAGTGTCTG-- 3' Rfwd3 mmu-let-7bstar beg:147 end:168 pic:3' CCCTTCCGTCATCC-AACATATC 5'& .|| || ||| ||||.|. &5' ---GAGACACCAGGATTGTGTG- 3' Rfwd3 mmu-let-7c beg:296 end:322 pic:3' TTGGTATGTTGGATG--ATGGAGT 5'& ||||| ||||||| | ||. &5' AACCAACCAACCTAAATTGTCTT- 3' Rfwd3 mmu-miR-106a beg:266 end:285 pic:3' GATGGACGTGACAATCGTGAAAC 5'& ||||| ||||.|||| &5' -----TGCACCA--AGCATTTTG 3' Rfwd3 mmu-miR-106b beg:266 end:285 pic:3' TAGACGTGACAGTCGTGAAAT 5'& ||||| ||||.|||. &5' ---TGCACCA--AGCATTTTG 3' Rfwd3 mmu-miR-1 beg:1320 end:1340 pic:3' TATGTATGAAGAAATGTAAGGT 5'& ||||||.| ||||. ||| &5' ATACATGC--CTTTGG--TCC- 3' Rfwd3 mmu-miR-1186 beg:1323 end:1346 pic:3' GTACGGAAATTAAGGTCGTGAG 5'& |||||||||..| ||||||| &5' CATGCCTTTGGTCCCAGCAC-- 3' Rfwd3 mmu-miR-1186 beg:952 end:973 pic:3' GTACGGAAATTAAGGTCGTGAG 5'& || |||||||.|. &5' ----CCAAATTGTCCAGCATTT 3' Rfwd3 mmu-miR-1186b beg:1316 end:1342 pic:3' CACCAC---GTACGGAAATTAGGGT 5'& ||| |||||||||..||||| &5' --GGTAATACATGCCTTTGGTCCCA 3' Rfwd3 mmu-miR-1191 beg:1684 end:1703 pic:3' ATCCCGATGTATCATTCTGAC 5'& ||| |||| ||||.||| &5' -AGG---ACATT-TAAGGCTG 3' Rfwd3 mmu-miR-1195 beg:763 end:790 pic:3' ACTCGT-CCGACCG-GAGCTTGAGT 5'& |||| |||| |||||||||| &5' -GAGCCTGGCTTTTACTCGAACTCA 3' Rfwd3 mmu-miR-1199 beg:915 end:936 pic:3' GGCGCGCTGGCCC----TGAGTCT 5'& || || ||||||| &5' ------GAAAGGAAGACACTCAGA 3' Rfwd3 mmu-miR-124 beg:989 end:1011 pic:3' CCGTAAGT-GGCGC-ACGGAAT 5'& .|||.. |.|| ||||||| &5' --TATTTGTCTGCTTTGCCTTA 3' Rfwd3 mmu-miR-125a-3p beg:1028 end:1051 pic:3' CCGAGGGTTCT-TGGAGTGGACA 5'& || ||.|||| |||| .|| &5' -GCCCCTAAGACACCTTGTCT-- 3' Rfwd3 mmu-miR-1274a beg:1141 end:1161 pic:3' ACCGCGGACTTGTCCCTGGACT 5'& ||. ..|||||||| &5' ----GCTATTTTGGGGACCTG- 3' Rfwd3 mmu-miR-127star beg:1554 end:1571 pic:3' TAGTCTCGGGAGACTCGAAGTC 5'& |.|||. |||||||. &5' ----GGGCCTG--GAGCTTCG- 3' Rfwd3 mmu-miR-127star beg:2018 end:2037 pic:3' TAGTCTCGGGAGACT--CGAAGTC 5'& |.||| || |.|||| &5' ------GTCCTGTGTGTGTTTCA- 3' Rfwd3 mmu-miR-130a beg:1746 end:1766 pic:3' TACGGGAAAATTGT--AACGTGAC 5'& |||| |..|| |||||.| &5' -TGCCG---TGGCAATTTGCATT- 3' Rfwd3 mmu-miR-132 beg:109 end:134 pic:3' GCTGGTACCGAC--ATCTGA-CAAT 5'& ||.|||||.| |.||.| || &5' -GATCATGGTTCATTGGATTAGT-- 3' Rfwd3 mmu-miR-135a beg:624 end:642 pic:3' AGTGTATCCTTATTTTTCGGTAT 5'& || ||. ||||||| &5' --------GACTAGCTAGCCATA 3' Rfwd3 mmu-miR-135a beg:1407 end:1428 pic:3' AGTGTATCCTTAT--TTTTCGGTAT 5'& ||| ||||||.||| &5' -------GGACAGCCAAAAGCTATA 3' Rfwd3 mmu-miR-135astar beg:1353 end:1376 pic:3' GCGGTG-CCGAGGTTAGGGATAT 5'& | || ||. .||||||||. &5' -GAAACTGGTA--GATCCCTATG 3' Rfwd3 mmu-miR-138 beg:1941 end:1962 pic:3' GCCGGACTAAGTGTTGTGGTCGA 5'& ||. || .|.||||||| &5' --GCTCTAGTCTTAGCACCAGC- 3' Rfwd3 mmu-miR-142-3p beg:496 end:516 pic:3' AGGTATTTCATCCTTTGTGATGT 5'& ||||| .||||.| &5' -CCATACCCCT----GCACTGC- 3' Rfwd3 mmu-miR-142-3p beg:1092 end:1105 pic:3' AGGTATTTCATCCTTTGTGATGT 5'& |||.|||||. &5' ------------GAAGCACTAT- 3' Rfwd3 mmu-miR-143 beg:1911 end:1933 pic:3' CTCGATG-TCAC-GAAGTAGAGT 5'& .|.| || ||||||||| &5' ---TTGCAAGAAACTTCATCTC- 3' Rfwd3 mmu-miR-145star beg:866 end:886 pic:3' GTTCTT-GTC-ATAAAGGTCCTTA 5'& ||| ..| |||| |||||| &5' ---GAAGTGGTTATTCTCAGGAA- 3' Rfwd3 mmu-miR-148a beg:505 end:515 pic:3' TGTTTCAAGACATCACGTGACT 5'& ||||||| &5' --------------TGCACTG- 3' Rfwd3 mmu-miR-148b beg:505 end:515 pic:3' TGTTTCAAGACACTACGTGACT 5'& ||||||| &5' --------------TGCACTG- 3' Rfwd3 mmu-miR-150 beg:1775 end:1796 pic:3' GTGACCATGTTCCCAACCCTCT 5'& .||| |. .||| ||||.|| &5' --TTGG-ATTGGGG-TGGGGGA 3' Rfwd3 mmu-miR-151-3p beg:1642 end:1659 pic:3' GGAGTTCCTCGGAGTCAGATC 5'& |||.| |.|||||.| &5' --TCAGG-----TTAGTCTGG 3' Rfwd3 mmu-miR-151-3p beg:758 end:776 pic:3' GGAGTTCCTCGGAGTCAGATC 5'& ||| |||||||| .| || &5' -CTC-AGGAGCCT-GG-CT-- 3' Rfwd3 mmu-miR-151-5p beg:90 end:114 pic:3' TGA-TCTGACACTCGAGGAGCT 5'& .|| .||||| |||| || || &5' GCTGGGACTG-GAGCGTCTGGA 3' Rfwd3 mmu-miR-152 beg:32 end:52 pic:3' GGTTCAAGACAGTACGTGACT 5'& | |||| ||||.||| &5' -CTAGTTAACGT-TGCATTGA 3' Rfwd3 mmu-miR-152 beg:669 end:688 pic:3' GGTTCAAGACAGTACGTGACT 5'& .|||||| ||||.|| &5' -TAAGTTCAT---TGCATTG- 3' Rfwd3 mmu-miR-152 beg:503 end:515 pic:3' GGTTCAAGACAGTACGTGACT 5'& | ||||||| &5' -----------CCTGCACTG- 3' Rfwd3 mmu-miR-154 beg:434 end:454 pic:3' GCTTCCGTTGTGCCT---ATTGGAT 5'& . .||| |.||||| &5' --------GTGTGGAATTTGACCTA 3' Rfwd3 mmu-miR-15a beg:15 end:36 pic:3' GTGTTTGGTAATACACGACGAT 5'& .||.||. ||||||| &5' -GCAGACTCACC---GCTGCTA 3' Rfwd3 mmu-miR-16 beg:154 end:177 pic:3' GCGGTTATAAAT-GCACGACGAT 5'& |||. ||| .||||||.|. &5' --CCAGGATTGTGTGTGCTGTTG 3' Rfwd3 mmu-miR-17 beg:266 end:285 pic:3' GATGGACGTGACATTCGTGAAAC 5'& ||||| |||||.|||| &5' -----TGCACC--AAGCATTTTG 3' Rfwd3 mmu-miR-185 beg:1492 end:1506 pic:3' AGTCCTTGACGGAAAGAGAGGT 5'& ||| |||||||| &5' ---------GCC-TTCTCTCC- 3' Rfwd3 mmu-miR-186 beg:1075 end:1093 pic:3' TCGGGTTTTCCTCTTAAGAAAC 5'& |.||.| .||||||| &5' --CTCAGAT-----GTTCTTTG 3' Rfwd3 mmu-miR-1892 beg:1496 end:1522 pic:3' TAG-GAGGGAGGGCA-GGGGTTTA 5'& || |||||| | |||||..| &5' -TCTCTCCCTTTCTTCCCCCAGGT 3' Rfwd3 mmu-miR-1894-5p beg:1429 end:1455 pic:3' TCTCCG--TCCACCATCCCCTCTC 5'& .||| ||| || ||||.|.| &5' GGAGAAAAAGG-GGGGGGGGGGGG 3' Rfwd3 mmu-miR-1897-5p beg:1499 end:1521 pic:3' GGGGGAGAAAGAGGTAGGTTTC 5'& |.|| ||||||.| |||.. &5' -CTCC-CTTTCTTCCCCCAGG- 3' Rfwd3 mmu-miR-18a beg:266 end:285 pic:3' GATAGACGTGATCTACGTGGAAT 5'& ||||| |||..||. &5' -----TGCACCAA--GCATTTTG 3' Rfwd3 mmu-miR-18astar beg:1644 end:1664 pic:3' GTCTTCCTCGTGAATCCCGTCA 5'& ||| . |.|||||| &5' ----AGGTTAGTCTGGGGCAG- 3' Rfwd3 mmu-miR-1903 beg:692 end:712 pic:3' ACAGAGTCCTTCTTCTTCTTCC 5'& | ||||| .|||||.| &5' ----TGAGGAAAGGGAAGAGG- 3' Rfwd3 mmu-miR-1904 beg:56 end:79 pic:3' GGAG---GGAGGTCTCCTCGTCTTG 5'& ||| || || |||||||. &5' CCTAGTACC-CCT---GAGCAGAG- 3' Rfwd3 mmu-miR-1906 beg:2002 end:2022 pic:3' TCGGGACGGAGTCCGACGACGT 5'& ..||| | ||||||. &5' --TTCTGAATAT--CTGCTGT- 3' Rfwd3 mmu-miR-1929 beg:1224 end:1245 pic:3' GAGACGAGATATTTCAGGATCTT 5'& ||||||. ||.|| |||| &5' -TCTGCTTAATGAAA-CCTA--- 3' Rfwd3 mmu-miR-1937b beg:1645 end:1660 pic:3' ACCCCCGAGCAGGCCCTA 5'& ||.| |||.|||. &5' ----GGTTAGTCTGGGG- 3' Rfwd3 mmu-miR-193star beg:4 end:27 pic:3' AGTAGAAC---GGGCGTTTCTGGGT 5'& .||||| |..|| ||||.|| &5' --GTCTTGAGACTTGC--AGACTCA 3' Rfwd3 mmu-miR-1944 beg:1704 end:1725 pic:3' TTAGTCTTGAACTGTAAGTCGTGTCTC 5'& .|.|.||| | |||||| &5' ----GGGATTTG-CTAC---CACAGA- 3' Rfwd3 mmu-miR-1946b beg:511 end:537 pic:3' TTTTCG-TACACGGTGGTGACGGGCCG 5'& || .| |||| ||| ||.|.||. &5' ----GCTGTCTGCCCCCAGTGTCTGGT 3' Rfwd3 mmu-miR-1948 beg:1542 end:1559 pic:3' GACATGCTCACGAGACGGATTT 5'& |||| ||||||.. &5' ------GAGTAG-CTGCCTGG- 3' Rfwd3 mmu-miR-1948 beg:193 end:212 pic:3' GACATGCTCACGAG-ACGGATTT 5'& |.| || |||||..| &5' ------GGGAA-TCTTGCCTGGA 3' Rfwd3 mmu-miR-1951 beg:396 end:411 pic:3' ATCGGTGTGGTCAG-AGGTGATG 5'& |||| ||||||| &5' ----------AGTCTTCCACTA- 3' Rfwd3 mmu-miR-1953 beg:1183 end:1206 pic:3' GTCTTCGGACTCTTGAAAGGGT 5'& .||| .|| ||.||||||| &5' -GGAAAATTGTTAATTTTCCCA 3' Rfwd3 mmu-miR-195 beg:153 end:177 pic:3' CGGTTATAA-AGACACGACGAT 5'& |||. | |||||||.|. &5' -CCAGGATTGTGTGTGCTGTTG 3' Rfwd3 mmu-miR-1955 beg:80 end:102 pic:3' TTTTCGACGTCACGTAGGACCCTGA 5'& |||. ||| |||||||| &5' -----CTGTTTA-CATGCTGGGACT 3' Rfwd3 mmu-miR-1955 beg:1637 end:1662 pic:3' TTTTCG-AC-GTCACGTA-GGACCCTGA 5'& || || ||| |. .|||||.| &5' ----GCGTGTCAG-GTTAGTCTGGGGC- 3' Rfwd3 mmu-miR-1957 beg:129 end:151 pic:3' CAGTATACGAG---ATGGTGAC 5'& .|.|| || ||.||||| &5' ---GTGTGGTCATGTATCACTG 3' Rfwd3 mmu-miR-1957 beg:1818 end:1839 pic:3' CAGTATACGAGATGGTGAC 5'& ||. ||||||||||||| &5' GTTTT-TGCTCTACCACTG 3' Rfwd3 mmu-miR-1958 beg:1494 end:1513 pic:3' TGAATGACGAAGGTGAAAGGAT 5'& ||| || | ||| |||||.| &5' -CTT-CT-C-TCC-CTTTCTT- 3' Rfwd3 mmu-miR-1959 beg:1013 end:1036 pic:3' GAGGTGACTCGATGTAGGGG 5'& ||||||| ||| || |||| &5' CTCCACTAAGCCACTGCCCC 3' Rfwd3 mmu-miR-199a-3p beg:500 end:519 pic:3' ATTGGTTACACGTCTGATGACA 5'& ||| ||| |||.|||| &5' --ACCCC--TGC--ACTGCTGT 3' Rfwd3 mmu-miR-199b beg:500 end:519 pic:3' ATTGGTTACACGTCTGATGACA 5'& ||| ||| |||.|||| &5' --ACCCC--TGC--ACTGCTGT 3' Rfwd3 mmu-miR-199bstar beg:82 end:99 pic:3' CTTGTCCATCAGATTTGTGACCC 5'& ||.|| |..||||| &5' ---------GTTTACATGCTGGG 3' Rfwd3 mmu-miR-19a beg:1744 end:1765 pic:3' AGTCAAAAC-GTATC--TAAACGTGT 5'& ||| |.|.| |||||||. &5' ------TTGCCGTGGCAATTTGCAT- 3' Rfwd3 mmu-miR-19b beg:1745 end:1765 pic:3' AGTCAAAAC-GTACC--TAAACGTGT 5'& ||| |.||| |||||||. &5' ------TTGCCGTGGCAATTTGCAT- 3' Rfwd3 mmu-miR-207 beg:1439 end:1463 pic:3' CTCCCTCCTCTCGGTCCTCTTCG 5'& |.|||.||.|.| || |||| &5' GGGGGGGGGGGGGCAAAAGAA-- 3' Rfwd3 mmu-miR-20b beg:266 end:285 pic:3' GATGGACGTGATACTCGTGAAAC 5'& ||||| ||||.|||| &5' -----TGCACCA--AGCATTTTG 3' Rfwd3 mmu-miR-211 beg:687 end:708 pic:3' TCCGTTTCCTACTGT-TTCCCTT 5'& |.||| ||| . ||||||| &5' ----AGAGG-TGAGGAAAGGGAA 3' Rfwd3 mmu-miR-2134 beg:1038 end:1057 pic:3' CGTGGGGCAAAGGGTTCTG 5'& ||||..| ||.||||.| &5' -CACCTTG--TCTCAAGGC 3' Rfwd3 mmu-miR-2135 beg:1791 end:1809 pic:3' CAAAGC-CGGGGTTCTGGAGA 5'& | |. |||.|||||| &5' -----GAGTGCCAGGACCTC- 3' Rfwd3 mmu-miR-2140 beg:493 end:514 pic:3' TGGTGGTTCTA-GACGTGGA 5'& | ||| ||||||. &5' -CTCCCATACCCCTGCACT- 3' Rfwd3 mmu-miR-214 beg:2014 end:2041 pic:3' TGAC-GGACAGACACGGACG-ACA 5'& .||| ||||| ||||..| ||| &5' GCTGTCCTGTGTGTGTTTCAATGT 3' Rfwd3 mmu-miR-2145 beg:1795 end:1815 pic:3' TTGGTCC-GGGCTGGGACGA 5'& .||||| ||. |||| &5' -GCCAGGACCTCAACCTG-- 3' Rfwd3 mmu-miR-2183 beg:1437 end:1458 pic:3' TCCTCCAGTCCCCAAGTT 5'& |||.|| .|||| ||| &5' AGGGGGGGGGGGGGGCAA 3' Rfwd3 mmu-miR-2183 beg:108 end:124 pic:3' TCCTCCAGTCCCCAAGTT 5'& ||| ||| |||||| &5' -GGA--TCAT-GGTTCA- 3' Rfwd3 mmu-miR-223 beg:1686 end:1705 pic:3' ACCCCATAAACTGT-----TTGACTGT 5'& |||| ..||||| &5' ----------GACATTTAAGGCTGAC- 3' Rfwd3 mmu-miR-22star beg:1674 end:1692 pic:3' ATTTCGAACGGTGACTTCTTGA 5'& |||||| .|||||.|| &5' -----CTTGCC-TTGAAGGAC- 3' Rfwd3 mmu-miR-24 beg:1547 end:1562 pic:3' GACAAGGACGACTTGACTCGGT 5'& |||| |||.||| &5' --------GCTGC-CTGGGCC- 3' Rfwd3 mmu-miR-24-2star beg:1043 end:1064 pic:3' TGACAAAGTCGAGTCATCCGTG 5'& .||| ||| || |||||| &5' -TTGTCTCAAGGCA-TAGGCA- 3' Rfwd3 mmu-miR-24 beg:1819 end:1843 pic:3' GACAAGGACGACT---TGACTCGGT 5'& |||..|||| |||||||. &5' --GTTTTTGCTCTACCACTGAGCT- 3' Rfwd3 mmu-miR-26a beg:474 end:493 pic:3' TCGGATAGGACCTAATGAACTT 5'& ||| || |||||| &5' --CCTTTCAGTG---ACTTGA- 3' Rfwd3 mmu-miR-26b beg:473 end:493 pic:3' TGGATAGGACTTAATGAACTT 5'& |||| || |||||| &5' ACCTTTCAGTG---ACTTGA- 3' Rfwd3 mmu-miR-27bstar beg:1929 end:1947 pic:3' CAAGTGGTTAGTCGATTCGAGA 5'& | |.|| ||..||||| &5' ---CTCTAAAC--CTGGGCTCT 3' Rfwd3 mmu-miR-291a-5p beg:1075 end:1096 pic:3' TCTCTCCCGGAGGT-----GAAACTAC 5'& .||| |||||||| &5' --------TCTCAGATGTTCTTTGATG 3' Rfwd3 mmu-miR-292-3p beg:755 end:782 pic:3' TGTGAGT-TTTGGACCGCC-GTGAAA 5'& |.||||| .|.|||||| .||| &5' ATACTCAGGAGCCTGGCTTTTACT-- 3' Rfwd3 mmu-miR-294 beg:267 end:284 pic:3' TGTGTGTTTTCCCTTCGTGAAA 5'& .||| || ||||.||| &5' GCAC-CA-------AGCATTTT 3' Rfwd3 mmu-miR-298 beg:1482 end:1507 pic:3' CCCTTCTTGTCG--GGAGGAGACGG 5'& ||.||| ||. |||.|||| || &5' --GAGGAA-AGTCGCCTTCTCTCCC 3' Rfwd3 mmu-miR-29astar beg:373 end:394 pic:3' GACTTGTGGTTTTCTTTAGTCA 5'& ||.|.. ||||||| ||| &5' -TGGATG-CAAAAGATA-CAG- 3' Rfwd3 mmu-miR-301a beg:665 end:688 pic:3' CGAAACTGTTATGA---TAACGTGAC 5'& .||.|| ||||||.|| &5' ------GCAGTAAGTTCATTGCATTG 3' Rfwd3 mmu-miR-302a beg:952 end:974 pic:3' AGTGGTTTTGTACCT-TCGTGAAT 5'& || ||||| || ||||.||| &5' TC-CCAAAT--TGTCCAGCATTTA 3' Rfwd3 mmu-miR-302cstar beg:1806 end:1823 pic:3' CGTCCATTGGGGTACAATTTCG 5'& ||||. |||||.|. &5' ------AACCTG--GTTAAGGT 3' Rfwd3 mmu-miR-302d beg:953 end:974 pic:3' TGTGAGTTTGTACCTTCGTGAAT 5'& ||||. ||||.||| &5' -----CAAATTGTCCAGCATTTA 3' Rfwd3 mmu-miR-3072 beg:1437 end:1457 pic:3' TCTTCCGAAGGACCTCCCCCGT 5'& ||..|| ||.||||||| &5' AGGGGGG-----GGGGGGGGCA 3' Rfwd3 mmu-miR-3072star beg:1493 end:1516 pic:3' GGACGGGAGGGAGCCCCAGGGA 5'& ||| |.||||||. |||| &5' CCTTCTCTCCCTTTCT-TCCC- 3' Rfwd3 mmu-miR-30c beg:73 end:92 pic:3' CGACTCTCACATCCTACAAATGT 5'& |||| |||||||| &5' ---GAGATATC----TGTTTACA 3' Rfwd3 mmu-miR-30c-1star beg:481 end:502 pic:3' CCTCATTTGTTGGGAGAGGGTC 5'& |||.| ..||||||| &5' --AGTGACTTGATTTCTCCCA- 3' Rfwd3 mmu-miR-30c-2star beg:1185 end:1207 pic:3' TCTCATTTGTCGG--AAGAGGGTC 5'& |||. |. ||.|||||| &5' -----AAATTGTTAATTTTCCCAG 3' Rfwd3 mmu-miR-30c-2star beg:1060 end:1083 pic:3' TCTCATTTGT-CGGA---AGAGGGTC 5'& |||| |.|| ||||.||| &5' ------AACATGTCTGATTCTCTCAG 3' Rfwd3 mmu-miR-30c-2star beg:228 end:246 pic:3' TCTCATTTGTCGGAAGAGGGTC 5'& || ||||.| |||.|| &5' ----TATACAGTC--CTCTCA- 3' Rfwd3 mmu-miR-30c-2star beg:480 end:502 pic:3' TCTCATTTGTCGGAAGAGGGTC 5'& |||.| .|||||||| &5' --AGTGACTTGATTTCTCCCA- 3' Rfwd3 mmu-miR-30estar beg:131 end:153 pic:3' CGACATTTGTAGGC--TGACTTTC 5'& |||.. ||| . |||||.| &5' --TGTGGTCATGTATCACTGAGA- 3' Rfwd3 mmu-miR-31star beg:633 end:656 pic:3' CTACCGTTATACAA--CCGTATCGT 5'& || |||||| |||||||| &5' ----GCCATATGTAAAGGCATAGC- 3' Rfwd3 mmu-miR-32 beg:651 end:674 pic:3' ACGTTGAA--TCATTACACGTTAT 5'& .|.||| || ||||||.|| &5' --TAGCTTTAAGCTTTGTGCAGTA 3' Rfwd3 mmu-miR-327 beg:1119 end:1139 pic:3' TAG-GAGTACGGGGAGTTCA 5'& || .|||||||. |||| &5' -TCTTTCATGCCTATCAA-- 3' Rfwd3 mmu-miR-330star beg:536 end:559 pic:3' AGAGACGTCCGGGACACGAAACG 5'& .||||. | | |||||||. &5' -TTCTGTGAGA--TATGCTTTGT 3' Rfwd3 mmu-miR-33 beg:366 end:384 pic:3' ACGTTACGTTGATGTTACGTG 5'& ||| || .||||| &5' -----TGCTTCTTGGATGCA- 3' Rfwd3 mmu-miR-331-5p beg:569 end:592 pic:3' CCTAGGGACCCT-GGTATGGATC 5'& ||||| || ||||.|||| &5' --ATCCCAGGTATCCATGCCTA- 3' Rfwd3 mmu-miR-335-5p beg:1518 end:1530 pic:3' TGTAAAAAGCAATAACGAGAACT 5'& ||||.|||| &5' --------------TGCTTTTGA 3' Rfwd3 mmu-miR-33star beg:263 end:282 pic:3' CAC-TACGTGACACCTTTGTAAC 5'& | |||||| ||.|||| &5' --GTATGCACC----AAGCATT- 3' Rfwd3 mmu-miR-342-5p beg:176 end:196 pic:3' GAGTTAGTGTCTATCGTGGGGA 5'& |||| ||.||||.| &5' ----ATCAAATG-AGTACCCTT 3' Rfwd3 mmu-miR-342-5p beg:45 end:71 pic:3' GAGTTAG--TGTCTATCGTGGGGA 5'& | ||. .|| |||.|||||| &5' -TTGATTTAGCACCTAGTACCCCT 3' Rfwd3 mmu-miR-344 beg:104 end:132 pic:3' TGTCAGTCCGAA-ACCG----ATCTAGT 5'& ||| || |||. |.|||.| &5' ---GTCTGGATCATGGTTCATTGGATTA 3' Rfwd3 mmu-miR-3470b beg:1514 end:1538 pic:3' GGTCGGACCAGA-TGTCTCACT 5'& |||| . |.||||||| &5' CCAGGTGCTTTTGATAGAGTGA 3' Rfwd3 mmu-miR-3471 beg:1992 end:2008 pic:3' TTACGGAATGTCAACCTAGAGT 5'& .|| ||||.|| &5' --------GCATTGGGATTTC- 3' Rfwd3 mmu-miR-3473 beg:1492 end:1506 pic:3' CCGACTCGGTAGAGAGGT 5'& ||| ||||||| &5' ------GCCTTCTCTCC- 3' Rfwd3 mmu-miR-3474 beg:561 end:580 pic:3' CTTAGGTGCAGAGGAGGGTCCC 5'& || ||. | ||||||| &5' -----CAAGTTACATCCCAGG- 3' Rfwd3 mmu-miR-3475 beg:1294 end:1312 pic:3' AAGTTTGGTACA--CGGAGGTCT 5'& |||| ||.|||||| &5' --------ATGTCAGCTTCCAGA 3' Rfwd3 mmu-miR-34a beg:496 end:517 pic:3' TGTTGGTCGATTC-TGTGACGGT 5'& ||| .||||||. &5' ----CCATACCCCTGCACTGCT- 3' Rfwd3 mmu-miR-34b-5p beg:505 end:517 pic:3' TGTTAGTCGATTAATGTGACGGA 5'& |.||||||. &5' -------------TGCACTGCT- 3' Rfwd3 mmu-miR-34c beg:504 end:517 pic:3' CGTTAGTCGATTGATGTGACGGA 5'& ||.||||||. &5' ------------CTGCACTGCT- 3' Rfwd3 mmu-miR-34c beg:1147 end:1168 pic:3' CGTTAGTCGATTGATGTGACGGA 5'& | | | ||..|||||| &5' ----TTGGGGACCTGTACTGCC- 3' Rfwd3 mmu-miR-350 beg:280 end:294 pic:3' CTTTCACATACCCGAAACACTT 5'& |||| |||||| &5' ---------TGGGG-TTGTGA- 3' Rfwd3 mmu-miR-361 beg:584 end:607 pic:3' CATGGGGACCTCTAA-GACTATT 5'& |.||. ||| .|||||| &5' -TGCCTACT-AGAATGTTGATAA 3' Rfwd3 mmu-miR-361 beg:1512 end:1533 pic:3' CATGGGGACCTCTAAGACTATT 5'& |||| || | ||.|||||. &5' ---CCCCAGGTGCTTTTGATAG 3' Rfwd3 mmu-miR-367 beg:658 end:673 pic:3' AGTGGTAACGATTTCACGTTAA 5'& ||| |||||.| &5' --------GCTTT-GTGCAGT- 3' Rfwd3 mmu-miR-370 beg:572 end:596 pic:3' TGGTCCA-AGGTG-GGGTCGTCCG 5'& |||||| ||||. ||.| .|| &5' -CCAGGTATCCATGCCTACTAG-- 3' Rfwd3 mmu-miR-376b beg:1358 end:1377 pic:3' TTCACCTACAAGGAGATACTA 5'& ||| ||| |||||| &5' ---TGGTAGATCC-CTATGA- 3' Rfwd3 mmu-miR-378star beg:1560 end:1581 pic:3' TGTGTCCTGGACCTC--------AGTCCTC 5'& |||||| |||||| &5' ---------CTGGAGCTTCGATTTCAGGA- 3' Rfwd3 mmu-miR-379 beg:1818 end:1836 pic:3' GGATGCAAGGTATCAGATGGT 5'& |||.. ||||||| &5' -----GTTTTTGC-TCTACCA 3' Rfwd3 mmu-miR-384-5p beg:70 end:92 pic:3' TGTAACGGATCCTTA-ACAAATGT 5'& || || || |||||||| &5' -----GCAGAGATATCTGTTTACA 3' Rfwd3 mmu-miR-421 beg:157 end:178 pic:3' CGCGGGTTAAT-TACA-GACAACTA 5'& .|||. .||| ||||||. &5' ------GATTGTGTGTGCTGTTGG- 3' Rfwd3 mmu-miR-423-5p beg:1486 end:1510 pic:3' TTTCAGAGCGAGAGACGGGGAGT 5'& |||||| | .||||| |||.|. &5' AAAGTCGCCTTCTCT-CCCTTT- 3' Rfwd3 mmu-miR-431 beg:1563 end:1583 pic:3' ACGTACTGCCGGACGTTCTGT 5'& || || .| ||.||.| &5' -GCTT--CGATTT-CAGGATA 3' Rfwd3 mmu-miR-431 beg:1022 end:1043 pic:3' ACGTACTGCCGGACGTTCTGT 5'& || || ||| .|||||| &5' -GCC--ACTGCCCCTAAGACA 3' Rfwd3 mmu-miR-431 beg:1951 end:1967 pic:3' ACGTACTGCCGGACGTTCTGT 5'& ||| || ||||||. &5' -GCA------CCAGCAAGAT- 3' Rfwd3 mmu-miR-432 beg:1199 end:1216 pic:3' GACGGGTGACTAGATGAGGTTCT 5'& |||| || |.|||||| &5' ---CCCA--GA---ATTCCAAG- 3' Rfwd3 mmu-miR-432 beg:443 end:462 pic:3' GACGGGTGACTAGAT-GAGGTTCT 5'& .||| ||| .|||||| &5' -------TTGACCTATTTCCAAG- 3' Rfwd3 mmu-miR-448 beg:624 end:647 pic:3' TACCCTGTAGGAT--GTATACGTT 5'& ||| ||| ||||||.|| &5' ----GACTAGCTAGCCATATGTAA 3' Rfwd3 mmu-miR-449a beg:496 end:517 pic:3' TGGTCGATTGTT-ATGTGACGGT 5'& ||| || |.||||||. &5' -CCAT---ACCCCTGCACTGCT- 3' Rfwd3 mmu-miR-449b beg:496 end:517 pic:3' CGGTCGATTGTTGTGACGGA 5'& ||| .||||||. &5' -CCATACCCCTGCACTGCT- 3' Rfwd3 mmu-miR-449c beg:1151 end:1168 pic:3' GGTCGATCGTTACGTGACGGA 5'& .| ||.|||||| &5' ------GGACCTGTACTGCC- 3' Rfwd3 mmu-miR-450a-3p beg:1924 end:1936 pic:3' TACTTACGTTTCGTAGGGGTTA 5'& ||||.|.|| &5' ------------CATCTCTAA- 3' Rfwd3 mmu-miR-450a-3p beg:259 end:287 pic:3' TACT--TACGT--TTCGTAGGGGTTA 5'& |||| ||||| ||||||... .. &5' ATGAGTATGCACCAAGCATTTTGGG- 3' Rfwd3 mmu-miR-450a-3p beg:1791 end:1810 pic:3' TACTTACGTTTCGTAGGGGTTA 5'& ||.||| |.| ||.||| &5' --GAGTGCCAGGA--CCTCAA- 3' Rfwd3 mmu-miR-450b-3p beg:1189 end:1207 pic:3' TACGTACGTTTTACAAGGGTTA 5'& ||. ||| ||||||. &5' -----TGTT-AATTTTCCCAG- 3' Rfwd3 mmu-miR-450b-3p beg:939 end:959 pic:3' TACGTACGTTTTACAAGGGTTA 5'& ||| | .|| |||||| &5' ---CATTCTT-GTGGTCCCAA- 3' Rfwd3 mmu-miR-450b-5p beg:1901 end:1922 pic:3' ATAAGTCCTTGT----ATGACGTTTT 5'& .||| ||.|||||.| &5' --------GACAACCTTATTGCAAGA 3' Rfwd3 mmu-miR-465b-5p beg:1095 end:1117 pic:3' GTCTAGTCGTGGTA----AGATTTAT 5'& |||||.|| |.|||||| &5' ------AGCACTATCTTTTTTAAATA 3' Rfwd3 mmu-miR-465c-5p beg:1723 end:1739 pic:3' GTCTAGTCGCGGTAAGATTTAT 5'& ||.| ||||||| &5' ---------GCTAAGCTAAATA 3' Rfwd3 mmu-miR-469 beg:694 end:713 pic:3' CCTGTGGTTCTAGTTACTTTCTCCGT 5'& |.|| |.||||||. &5' -------AGGAAAG--GGAAGAGGT- 3' Rfwd3 mmu-miR-483star beg:1777 end:1799 pic:3' TTCTGCCCTCCCCTCCTCACT 5'& .||. ||.| ||.|||||| &5' -GGATTGGGGTGGGGGAGTG- 3' Rfwd3 mmu-miR-486 beg:372 end:396 pic:3' GAGCCC-CGTCGAGTC-ATGTCCT 5'& ||.|| ||| || ||||||| &5' CTTGGATGCAAA--AGATACAGGA 3' Rfwd3 mmu-miR-496 beg:458 end:474 pic:3' CTCTAACCGGTACATTATGAGT 5'& |.| || |||.|||| &5' -------GTC-TG-AATGCTCA 3' Rfwd3 mmu-miR-503 beg:14 end:36 pic:3' GACGTCATGACAAGGGCGACGAT 5'& ||||| ||| ||||||||| &5' -TGCAG-ACTCA--CCGCTGCTA 3' Rfwd3 mmu-miR-505 beg:588 end:605 pic:3' TCTTTTGGTCGTTCACAACTGC 5'& ||.|| ||||||. &5' -----ACTAGAA--TGTTGAT- 3' Rfwd3 mmu-miR-511 beg:1339 end:1356 pic:3' ACTCACGTCTCGTTTTCCGTA 5'& ||| || .|||||| &5' -----GCAC-GCTGAAGGCA- 3' Rfwd3 mmu-miR-532-3p beg:1777 end:1795 pic:3' ACGTTCGGAACCCACACCCTCC 5'& .| ||||| |||||.| &5' ----GGA-TTGGG-GTGGGGG- 3' Rfwd3 mmu-miR-539 beg:478 end:500 pic:3' TGTGTGGTTCCT--ATTAAAGAGG 5'& .||. || |.|||||||| &5' -----TCAGTGACTTGATTTCTCC 3' Rfwd3 mmu-miR-544 beg:1343 end:1359 pic:3' CTCGAACGATTTTTACGTCTTA 5'& |||.|| |||||| &5' ------GCTGAAG--GCAGAA- 3' Rfwd3 mmu-miR-568 beg:160 end:181 pic:3' CACACATATG-TAAATATGTA 5'& |||||.|.| .|| .||| &5' -TGTGTGTGCTGTTG--GCAT 3' Rfwd3 mmu-miR-615-5p beg:1791 end:1809 pic:3' CTAGGCTCGTGGCCCCTGGGGG 5'& ||| || |||||.| &5' -----GAGTGCCA-GGACCTC- 3' Rfwd3 mmu-miR-674 beg:465 end:487 pic:3' ATGTG-GTGAGGGTAGAGTCACG 5'& |..| ||. || |.|||||| &5' -ATGCTCATAACC-TTTCAGTG- 3' Rfwd3 mmu-miR-680 beg:1066 end:1089 pic:3' GGGGGTACAGTC-GTCTACGGG 5'& .|. || || ||||||..| &5' -TCTGAT-TCTCTCAGATGTTC 3' Rfwd3 mmu-miR-681 beg:1155 end:1175 pic:3' TCGACG-GACGGTCGCTCCGAC 5'& |||. |||||||| ||| &5' --CTGTACTGCCAGCAAGG--- 3' Rfwd3 mmu-miR-684 beg:910 end:929 pic:3' AACTGAACTTCCCTTTTGA 5'& |||| ||| ||||.|| &5' -TGACA-GAAAGGAAGAC- 3' Rfwd3 mmu-miR-684 beg:1172 end:1193 pic:3' AACTGAAC-TTCCCTTTTGA 5'& ||.| |||||||||.| &5' --GATTATTAAGGGAAAATT 3' Rfwd3 mmu-miR-687 beg:1563 end:1584 pic:3' AGTAACGACG-TAAGGTCCTATC 5'& ||| | |||.|||||||| &5' -----GCTTCGATTTCAGGATAG 3' Rfwd3 mmu-miR-690 beg:1936 end:1953 pic:3' AAACCAACACTCG-GATCGGAAA 5'& ||.|| ||||.||| &5' --------TGGGCTCTAGTCTT- 3' Rfwd3 mmu-miR-690 beg:639 end:659 pic:3' AAACCAACAC--TCGGATCGGAAA 5'& ||| .|| ||||.|| &5' ------TGTAAAGGCATAGCTTT- 3' Rfwd3 mmu-miR-691 beg:870 end:886 pic:3' AAAAGACGGAGAGAAGTCCTTA 5'& |. .|| ||||||| &5' ------GTTATTC-TCAGGAA- 3' Rfwd3 mmu-miR-693-5p beg:1202 end:1224 pic:3' CTTTTGAAAGCCTACACCGAC 5'& |.||.| ||||||| &5' -AGAATTCCAAGTTGTGGCT- 3' Rfwd3 mmu-miR-698 beg:689 end:708 pic:3' TCCCTTCCTTTGCTCTTAC 5'& ||| |||||| |.||| &5' AGGTGAGGAAA-GGGAA-- 3' Rfwd3 mmu-miR-702 beg:1778 end:1799 pic:3' CTCGCCCCATTTCC-CACCCGT 5'& || .|||||...|| ||| &5' GATTGGGGTGGGGGAGTG---- 3' Rfwd3 mmu-miR-704 beg:1050 end:1072 pic:3' GATCCTCGTCTCG-TGTACAGA 5'& ||| .|| || |||||||| &5' --AGGCATAG-GCAACATGTCT 3' Rfwd3 mmu-miR-708 beg:1137 end:1160 pic:3' GGGTCGATCTAACATTCGAGGAA 5'& |.|||||| ||| ..| ||| &5' CTCAGCTATTTTG-GGGA-CCT- 3' Rfwd3 mmu-miR-709 beg:837 end:857 pic:3' AGGAGGACGGAGACGGAGG 5'& ||||||| .||| |.|.. &5' -CCTCCTG-TTCTACTTTT 3' Rfwd3 mmu-miR-709 beg:1493 end:1515 pic:3' AGGAGGAC--GGAGACGGAGG 5'& |||.|| |||.| |.||| &5' -CCTTCTCTCCCTTT-CTTCC 3' Rfwd3 mmu-miR-710 beg:717 end:737 pic:3' GAGTTGAGAGGGGTTCTGAACC 5'& |||.| |. |||||||| &5' --CAATTGTTA--AAGACTTG- 3' Rfwd3 mmu-miR-713 beg:2020 end:2041 pic:3' CGACACACG-GAAGTCACGT 5'& |||||||. .|||| ||. &5' -CTGTGTGTGTTTCAATGT- 3' Rfwd3 mmu-miR-713 beg:511 end:532 pic:3' CGACACACGGAAGTCACGT 5'& ||||| |||| |||||. &5' GCTGTCTGCCCCCAGTGT- 3' Rfwd3 mmu-miR-742 beg:1207 end:1226 pic:3' AAATGGGTCGTACCACCGAAAG 5'& .||| .| |||||||| &5' ----TCCAA-GTTGTGGCTTT- 3' Rfwd3 mmu-miR-742 beg:756 end:779 pic:3' AAATGGGTCGTACCACCGAAAG 5'& |||.||| | |||||||. &5' --TACTCAGGAGCCTGGCTTTT 3' Rfwd3 mmu-miR-743b-5p beg:1991 end:2014 pic:3' ACTACCTGTGGTC----AGACTTGT 5'& ||.||. | ||||||.| &5' ----GGGCATTGGGATTTCTGAATA 3' Rfwd3 mmu-miR-743b-5p beg:454 end:469 pic:3' ACTACCTGTGG-TCAGACTTGT 5'& || ||||||||. &5' ---------CCAAGTCTGAAT- 3' Rfwd3 mmu-miR-744 beg:495 end:512 pic:3' ACGACAATCGGG-ATCGGGGCGT 5'& ||| || |||.||| &5' ---------CCCATACCCCTGCA 3' Rfwd3 mmu-miR-744 beg:1728 end:1750 pic:3' ACGACAATCGGGATCGGGGCGT 5'& ||| || ||||..|| &5' -GCTAAATA-CCAAGCCTTGC- 3' Rfwd3 mmu-miR-7a beg:387 end:408 pic:3' TGTTGTTTTAGTGATCAGAAGGT 5'& |||..| ||||||||| &5' ---ACAGGAGAG--AGTCTTCCA 3' Rfwd3 mmu-miR-7b beg:387 end:408 pic:3' TGTTGTTTTAGTGTTCAGAAGGT 5'& |||..| .||||||||| &5' ---ACAGGAGA--GAGTCTTCCA 3' Rfwd3 mmu-miR-871 beg:1991 end:2014 pic:3' GTACTGACCGTGATT----AGACTTAT 5'& ||||.|.. |||||||| &5' -------GGCATTGGGATTTCTGAATA 3' Rfwd3 mmu-miR-871 beg:457 end:470 pic:3' GTACTGACCGTGATTAGACTTAT 5'& |.|||||||. &5' -------------AGTCTGAATG 3' Rfwd3 mmu-miR-872star beg:102 end:124 pic:3' TCCTC-CGATGACGT--TATCAAGT 5'& ||| |. ||| | ||.||||| &5' --GAGCGT--CTGGATCATGGTTCA 3' Rfwd3 mmu-miR-876-3p beg:1011 end:1032 pic:3' ACTTAATGAAAC-ATTTGGTGAT 5'& |||| |||.|||||. &5' -----TACTCCACTAAGCCACTG 3' Rfwd3 mmu-miR-876-5p beg:1578 end:1606 pic:3' ATCACTAAGTGTCTC----TTTAGGT 5'& ||| |||||| .|||.|| &5' TAG-GATTCAAATTAAATAGAATTCA 3' Rfwd3 mmu-miR-879 beg:1547 end:1571 pic:3' CCGAAT--CTCGATATTCGGAGA 5'& ||| |.|| .|||.|| &5' -GCTGCCTGGGCCTGGAGCTTC- 3' Rfwd3 mmu-miR-879 beg:645 end:666 pic:3' CCGAATCTCGATATTCGGAGA 5'& ||| |||| |||||.|. &5' GGCAT--AGCTTTAAGCTTT- 3' Rfwd3 mmu-miR-879 beg:1727 end:1748 pic:3' CCGAATCTCGATA-----TTCGGAGA 5'& ||||| ||||||. &5' -------AGCTAAATACCAAGCCTT- 3' Rfwd3 mmu-miR-882 beg:1489 end:1506 pic:3' TGATTAC-GCGATTGAGAGAGGA 5'& | ||| .||||||| &5' ------GTCGCC--TTCTCTCC- 3' Rfwd3 mmu-miR-9 beg:1882 end:1906 pic:3' AGTATGTCGATCT-ATTGGTTTCT 5'& .||..| || |.|||||||| &5' --GTATGGACCGATTGACCAAAGA 3' Rfwd3 mmu-miR-92a beg:651 end:674 pic:3' GTCCGGCCC-TGTT-CACGTTAT 5'& ||. .| |||||.|| &5' ---GCTTTAAGCTTTGTGCAGTA 3' Rfwd3 mmu-miR-93 beg:266 end:285 pic:3' GATGGACGTGCTTGTCGTGAAAC 5'& ||||| ||||.|||| &5' -----TGCACCA--AGCATTTTG 3' Rfwd3 mmu-miR-712 beg:796 end:814 pic:3' CCATGGCGGGC-CCACTTCCTC 5'& |.| | ||||||| &5' ------GTCAATGCTGAAGGA- 3' Rfwd3 mmu-miR-125bstar beg:1663 end:1680 pic:3' TCCAGGGTTCTTGGACTGAACA 5'& |||. ||.|. ||||||| &5' -GGTT---AGGATATGACTTG- 3'

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Rfwd3 RAID00002128 mmu-miR-6945-5p miRNA MIMAT0027790 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID00003398 mmu-miR-7063-5p miRNA MIMAT0028030 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID00033957 mmu-miR-495-3p miRNA MIMAT0003456 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID00043894 mmu-miR-6240 miRNA MIMAT0024861 Rfwd3 mRNA 234736 Prediction 0.2202 Rfwd3 RAID00067471 mmu-miR-221-5p miRNA MIMAT0017060 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID00104318 mmu-miR-742-3p miRNA MIMAT0004237 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID00117578 mmu-miR-6903-5p miRNA MIMAT0027706 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID00136739 mmu-miR-30e-5p miRNA MIMAT0000248 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID00138531 mmu-miR-882 miRNA MIMAT0004847 Rfwd3 mRNA 234736 Prediction 0.2202 Rfwd3 RAID00143890 mmu-miR-208b-5p miRNA MIMAT0017280 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID00168444 mmu-miR-219a-5p miRNA MIMAT0000664 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID00171944 mmu-miR-503-5p miRNA MIMAT0003188 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID00348887 mmu-miR-421-5p miRNA MIMAT0017273 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID00372465 mmu-miR-410-3p miRNA MIMAT0001091 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID00465133 mmu-miR-539-5p miRNA MIMAT0003169 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID00531503 mmu-miR-488-3p miRNA MIMAT0003450 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID00547773 mmu-miR-1251-5p miRNA MIMAT0014824 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID00616333 mmu-miR-204-3p miRNA MIMAT0017002 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID00671331 mmu-miR-212-3p miRNA MIMAT0000659 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID00676918 mmu-miR-486a-3p miRNA MIMAT0017206 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID00694737 mmu-miR-181b-2-3p miRNA MIMAT0017084 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID00696771 mmu-miR-142a-3p miRNA MIMAT0000155 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID00722765 mmu-miR-669c-3p miRNA MIMAT0017253 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID00769622 mmu-miR-19a-3p miRNA MIMAT0000651 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID00774984 mmu-miR-6980-5p miRNA MIMAT0027862 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID00896885 mmu-miR-670-3p miRNA MIMAT0017242 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID01000817 mmu-miR-744-3p miRNA MIMAT0004820 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID01021717 mmu-miR-326-5p miRNA MIMAT0017027 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID01042285 mmu-miR-6929-3p miRNA MIMAT0027759 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID01043374 mmu-miR-449b miRNA MIMAT0005447 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID01043928 mmu-miR-449a-5p miRNA MIMAT0001542 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID01129097 mmu-miR-194-5p miRNA MIMAT0000224 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID01145450 mmu-miR-132-3p miRNA MIMAT0000144 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID01184249 mmu-miR-7117-5p miRNA MIMAT0028131 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID01288950 mmu-miR-7684-5p miRNA MIMAT0029890 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID01319098 mmu-miR-26b-5p miRNA MIMAT0000534 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID01326141 mmu-miR-7019-5p miRNA MIMAT0027942 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID01380589 mmu-miR-365-3p miRNA MIMAT0000711 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID01426413 mmu-miR-384-5p miRNA MIMAT0004745 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID01463487 mmu-miR-351-5p miRNA MIMAT0000609 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID01511974 mmu-miR-146b-5p miRNA MIMAT0003475 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID01566928 mmu-miR-224-5p miRNA MIMAT0000671 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID01598219 mmu-miR-143-3p miRNA MIMAT0000247 Rfwd3 mRNA 234736 Prediction 0.2202 Rfwd3 RAID01616616 mmu-miR-7069-5p miRNA MIMAT0028044 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID01666222 mmu-miR-182-5p miRNA MIMAT0000211 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID01667888 mmu-miR-5107-5p miRNA MIMAT0020615 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID01679813 mmu-miR-674-3p miRNA MIMAT0003741 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID01687602 mmu-miR-7a-5p miRNA MIMAT0000677 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID01761405 mmu-miR-486b-3p miRNA MIMAT0014944 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID01766518 mmu-miR-204-5p miRNA MIMAT0000237 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID01773318 mmu-miR-6415 miRNA MIMAT0025169 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID01780450 mmu-miR-712-5p miRNA MIMAT0003502 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID01826561 mmu-miR-3070-3p miRNA MIMAT0014847 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID01928172 mmu-miR-146a-5p miRNA MIMAT0000158 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID01938788 mmu-miR-590-3p miRNA MIMAT0004896 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID01947225 mmu-miR-196a-5p miRNA MIMAT0000518 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID01955955 mmu-miR-30c-5p miRNA MIMAT0000514 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID01978714 mmu-miR-504-5p miRNA MIMAT0004889 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID01984817 mmu-miR-7119-3p miRNA MIMAT0028136 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID02016150 mmu-miR-1195 miRNA MIMAT0005856 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID02019275 mmu-miR-125a-5p miRNA MIMAT0000135 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID02053390 mmu-miR-7685-3p miRNA MIMAT0029897 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID02075427 mmu-miR-292b-3p miRNA MIMAT0029865 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID02081778 mmu-miR-7091-3p miRNA MIMAT0028089 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID02151180 mmu-miR-7067-5p miRNA MIMAT0028038 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID02164153 mmu-miR-208a-5p miRNA MIMAT0017014 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID02207139 mmu-miR-3110-5p miRNA MIMAT0014951 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID02283344 mmu-miR-30b-5p miRNA MIMAT0000130 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID02312858 mmu-miR-290a-5p miRNA MIMAT0000366 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID02324065 mmu-miR-6384 miRNA MIMAT0025130 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID02342679 mmu-miR-34b-5p miRNA MIMAT0000382 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID02406002 mmu-miR-6954-5p miRNA MIMAT0027808 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID02423370 mmu-miR-196b-5p miRNA MIMAT0001081 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID02446297 mmu-miR-16-5p miRNA MIMAT0000527 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID02482644 mmu-miR-15a-5p miRNA MIMAT0000526 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID02492664 mmu-miR-181b-1-3p miRNA MIMAT0017067 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID02513095 mmu-miR-7011-3p miRNA MIMAT0027927 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID02573822 mmu-miR-30a-5p miRNA MIMAT0000128 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID02624853 mmu-miR-3473f miRNA MIMAT0031390 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID02643592 mmu-miR-138-5p miRNA MIMAT0000150 Rfwd3 mRNA 234736 Prediction 0.2202 Rfwd3 RAID02683536 mmu-miR-154-5p miRNA MIMAT0000164 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID02722893 mmu-miR-9-5p miRNA MIMAT0000142 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID02724766 mmu-miR-125b-2-3p miRNA MIMAT0004529 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID02753873 mmu-miR-5112 miRNA MIMAT0020620 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID02781960 mmu-miR-7212-3p miRNA MIMAT0028393 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID02799303 mmu-miR-6348 miRNA MIMAT0025091 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID02810598 mmu-miR-34a-5p miRNA MIMAT0000542 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID02815964 mmu-miR-217-5p miRNA MIMAT0000679 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID02817424 mmu-miR-125a-3p miRNA MIMAT0004528 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID02871464 mmu-miR-672-3p miRNA MIMAT0017241 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID02888239 mmu-miR-330-3p miRNA MIMAT0000569 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID02896647 mmu-miR-543-3p miRNA MIMAT0003168 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID02941277 mmu-miR-7035-5p miRNA MIMAT0027974 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID03016405 mmu-miR-34c-5p miRNA MIMAT0000381 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID03068555 mmu-miR-7212-5p miRNA MIMAT0028392 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID03142552 mmu-miR-211-5p miRNA MIMAT0000668 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID03242422 mmu-miR-3473a miRNA MIMAT0015645 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID03279035 mmu-miR-875-5p miRNA MIMAT0004937 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID03283148 mmu-miR-384-3p miRNA MIMAT0001076 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID03294368 mmu-miR-31-5p miRNA MIMAT0000538 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID03296648 mmu-miR-6996-3p miRNA MIMAT0027895 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID03309098 mmu-miR-322-5p miRNA MIMAT0000548 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID03380678 mmu-miR-485-5p miRNA MIMAT0003128 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID03402078 mmu-miR-292a-5p miRNA MIMAT0000369 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID03423210 mmu-miR-497a-5p miRNA MIMAT0003453 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID03425408 mmu-miR-185-5p miRNA MIMAT0000214 Rfwd3 mRNA 234736 Prediction 0.2202 Rfwd3 RAID03434686 mmu-miR-6907-5p miRNA MIMAT0027714 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID03438637 mmu-miR-26a-5p miRNA MIMAT0000533 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID03507601 mmu-miR-3970 miRNA MIMAT0019355 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID03572793 mmu-miR-9768-3p miRNA MIMAT0036460 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID03650044 mmu-miR-7b-5p miRNA MIMAT0000678 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID03656801 mmu-miR-361-5p miRNA MIMAT0000704 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID03674287 mmu-miR-30b-3p miRNA MIMAT0004524 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID03701245 mmu-miR-1955-5p miRNA MIMAT0009426 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID03736645 mmu-miR-449c-5p miRNA MIMAT0003460 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID03779301 mmu-miR-7118-5p miRNA MIMAT0028133 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID03814532 mmu-miR-15b-5p miRNA MIMAT0000124 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID03897531 mmu-miR-30d-5p miRNA MIMAT0000515 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID03945817 mmu-miR-125b-5p miRNA MIMAT0000136 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID03996674 mmu-miR-3474 miRNA MIMAT0015646 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID04027366 mmu-miR-3070-2-3p miRNA MIMAT0014849 Rfwd3 mRNA 234736 Prediction 0.1828 Rfwd3 RAID04048199 mmu-miR-19b-3p miRNA MIMAT0000513 Rfwd3 mRNA 234736 Prediction 0.1828