DNA & RNA Element - AREsite Gene Name Motif CDS Area ARE Area Evidence Zswim2 ATTTA 49-1944 1980-1984 Zswim2 WWATTTAWW 49-1944 1978-1986 Zswim2 WWWATTTAWWW 49-1944 1977-1987

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004519 mmu-let-7g* 71861 Zswim2 cguuccgucaccGGACAUGUca | |||||| cacauaagaaucCAUGUACAuc 3 11 65 86 [mm9:2:83755268-83755289:-] 0.6120 122 0 -9.89 -0.1166 MIMAT0000129 mmu-miR-30a* 71861 Zswim2 cgacguuuguaggcuGACUUUc |||||| acaguuuuauuacacCUGAAAa 2 8 7 28 [mm9:2:83755326-83755347:-] 0.6120 120 6 -8.65 -0.2340 MIMAT0000143 mmu-miR-9* 71861 Zswim2 ugaaagccaauagaUCGAAAUa ||:|||| ------aaaaaaacAGUUUUAu 2 9 1 16 [mm9:2:83755338-83755353:-] 0.6120 124 0 -5.81 -0.1133 MIMAT0000249 mmu-miR-30e* 71861 Zswim2 cgacauuuguaggcuGACUUUc |||||| acaguuuuauuacacCUGAAAa 2 8 7 28 [mm9:2:83755326-83755347:-] 0.6120 120 6 -7.01 -0.2340 MIMAT0004625 mmu-miR-16* 71861 Zswim2 agucgucGUGUCAGUUAUGAcc :|:| |||||| acaaauaUAUAUAAAAUACUcu 3 16 91 112 [mm9:2:83755242-83755263:-] 0.6120 123 0 -6.01 -0.5453 MIMAT0004647 mmu-miR-338-5p 71861 Zswim2 gugagucgugguccuAUAACAa |||||| auauauaaaauacucUAUUGUc 2 8 97 118 [mm9:2:83755236-83755257:-] 0.6120 120 6 -6.61 -0.5431 MIMAT0004663 mmu-miR-200c* 71861 Zswim2 ggUUUGUGACG-ACCCAUUCUGc |||:|:| : | |||| || caAAAUAUUUUAUUUGUAACACa 2 21 46 68 [mm9:2:83755286-83755308:-] 0.6120 123 0 -5.53 -0.1107 MIMAT0004665 mmu-miR-218-1* 71861 Zswim2 ccacgaacUGCCUUGGUACAaa | | | |||||| uaacacauAAGAAUCCAUGUac 3 15 62 83 [mm9:2:83755271-83755292:-] 0.6120 126 0 -9.31 -0.2044 MIMAT0004670 mmu-miR-7a* 71861 Zswim2 auACCGUCUG-ACACUAAACAac || | |: | | |||||| uaUGCAAAAUAUUUUAUUUGUaa 3 21 42 64 [mm9:2:83755290-83755312:-] 0.6120 127 0 -3.17 -0.2468 MIMAT0001637 mmu-miR-452 71861 Zswim2 cagagucAAAGGAGACGUUUgu ||| | |||||| augaauaUUUAAUAUGCAAAau 3 16 30 51 [mm9:2:83755303-83755324:-] 0.6120 131 0 -5.86 -0.4453 MIMAT0004790 mmu-miR-503* 71861 Zswim2 gguccgucaccuuugUUAUGAg |||||| gacaaauauauauaaAAUACUc 2 8 90 111 [mm9:2:83755243-83755264:-] 0.6120 120 6 -9.26 -0.6305 MIMAT0003511 mmu-miR-450b-5p 71861 Zswim2 auaaguccuuguaugACGUUUu |||||| aaugaauauuuaauaUGCAAAa 2 8 29 50 [mm9:2:83755304-83755325:-] 0.6120 120 6 -10.40 -0.7670 MIMAT0004843 mmu-miR-879* 71861 Zswim2 ggcuuucGAAC-UUCGGUAUUCg :||| || |||||| uauuuuaUUUGUAACACAUAAGa 2 16 51 73 [mm9:2:83755281-83755303:-] 0.6120 122 6 -9.80 -0.2780 MIMAT0005830 mmu-miR-466l 71861 Zswim2 uuauacacacguACAUAAAUAu | |||||:| uaugcaaaauauUUUAUUUGUa 2 11 42 63 [mm9:2:83755291-83755312:-] 0.6120 126 0 -5.24 -0.1156 MIMAT0005830 mmu-miR-466l 71861 Zswim2 uuauacacacgUAC--AUAAAUau ||| |||||| caccugaaaaaAUGAAUAUUUAau 3 12 19 42 [mm9:2:83755312-83755335:-] 0.6120 122 0 -1.38 -0.2597 MIMAT0005831 mmu-miR-669k 71861 Zswim2 aacguacgcacaUAUACGUau ||||||| aaugaauauuuaAUAUGCAaa 3 10 29 49 [mm9:2:83755305-83755325:-] 0.6120 125 0 -6.64 -0.6652 MIMAT0005837 mmu-miR-1187 71861 Zswim2 aauguguguaugugugUGUGUAu |||||| aaauauuuuauuuguaACACAUa 2 8 48 70 [mm9:2:83755284-83755306:-] 0.6120 120 6 -10.11 -0.3802 MIMAT0005838 mmu-miR-669j 71861 Zswim2 acaaacguacacucaUAUACGu |||||| aaaaaugaauauuuaAUAUGCa 2 8 26 47 [mm9:2:83755307-83755328:-] 0.6120 120 6 -7.35 -0.6625 MIMAT0005840 mmu-miR-669i 71861 Zswim2 caUACGUACACACAUAUACGu ||| || | | |||||| aaAUGAAUAU-UUAAUAUGCa 2 20 28 47 [mm9:2:83755307-83755326:-] 0.6120 125 6 -8.41 -0.6625 MIMAT0005842 mmu-miR-669h-3p 71861 Zswim2 acACGUACACACAUAUACGUau || || | | ||||||| aaUGAAUAU-UUAAUAUGCAaa 3 21 29 49 [mm9:2:83755305-83755325:-] 0.6120 134 0 -6.35 -0.6577 MIMAT0005859 mmu-miR-1198 71861 Zswim2 gguucggucgguCCUUGUGUAu | ||||||| aauauuuuauuuGUAACACAUa 2 11 49 70 [mm9:2:83755284-83755305:-] 0.6120 142 7 -9.92 -1.3059 MIMAT0007875 mmu-miR-1898 71861 Zswim2 cuaGGGGACA-CUUGGAACUGga :|| ||| | ||||||| gaaUCCAUGUACAUCCUUGACaa 3 20 72 94 [mm9:2:83755260-83755282:-] 0.6120 138 0 -19.30 -0.3751 MIMAT0009396 mmu-miR-1933-5p 71861 Zswim2 uuUG-AUUCU--GG--CUUGU-GGUACUGa || ||||| || | ||| || |||| acACAUAAGAAUCCAUGUACAUCCUUGACa 2 23 64 93 [mm9:2:83755261-83755290:-] 0.6120 126 0 -15.19 -0.2833 MIMAT0009432 mmu-miR-1959 71861 Zswim2 gaggugacucgAUGUAGGGg |||||||: aagaauccaugUACAUCCUu 2 10 70 89 [mm9:2:83755265-83755284:-] 0.6120 129 0 -16.50 -0.1244 MIMAT0012774 mmu-miR-664 71861 Zswim2 auccgacccCUCAUUUACUUAu || |||||||| auuacaccuGAAAAAAUGAAUa 2 14 15 36 [mm9:2:83755318-83755339:-] 0.6120 149 7 -8.96 -1.2618 MIMAT0004528 mmu-miR-125a-3p 71861 Zswim2 ccgaggguucuuggaGUGGACa |||||| aaaacaguuuuauuaCACCUGa 2 8 4 25 [mm9:2:83755329-83755350:-] 0.6120 120 6 -16.46 -0.3209 MIMAT0000163 mmu-miR-153 71861 Zswim2 cuagugaaaacacugAUACGUu |||||| aaaaugaauauuuaaUAUGCAa 2 8 27 48 [mm9:2:83755306-83755327:-] 0.6120 120 6 -9.87 -0.6666 MIMAT0000209 mmu-miR-129-5p 71861 Zswim2 cguucgggucugGCGUUUUuc :|||||| gaauauuuaauaUGCAAAAua 3 10 32 52 [mm9:2:83755302-83755322:-] 0.6120 121 0 -6.95 -0.6940 MIMAT0000673 mmu-miR-181b 71861 Zswim2 uggGUGGCUGUCGUUACUUACAa |||| : | ||||||| | uuaCACCUGAAAAAAUGAAUAUu 2 21 16 38 [mm9:2:83755316-83755338:-] 0.6120 132 0 -14.32 -0.1776 MIMAT0000674 mmu-miR-181c 71861 Zswim2 ugaGUGG-CUGUCCAACUUACAa |||| || | ||||| | uuaCACCUGAAAAAAUGAAUAUu 2 20 16 38 [mm9:2:83755316-83755338:-] 0.6120 122 0 -11.06 -0.1776 MIMAT0001533 mmu-miR-448 71861 Zswim2 uacCCUGUAGGAUGUAUACGUu | |:|| :|| ||||||| aauGAAUAU-UUA-AUAUGCAa 2 20 29 48 [mm9:2:83755306-83755325:-] 0.6120 151 7 -12.62 -1.3359 MIMAT0003738 mmu-miR-496 71861 Zswim2 cucuaaccgGUACAUUAUGAGu :|| ||||||| acaaauauaUAUAAAAUACUCu 2 14 91 112 [mm9:2:83755242-83755263:-] 0.6120 145 7 -7.71 -1.3406 MIMAT0004324 mmu-miR-181d 71861 Zswim2 uggGUGGCUGUUGUUACUUACAa |||| : || ||||||| | uuaCACCUGAAAAAAUGAAUAUu 2 21 16 38 [mm9:2:83755316-83755338:-] 0.6120 140 0 -14.32 -0.1759

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G056906 Zswim2 Mus musculus 71861

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Zswim2 mmu-miR-151-5p beg:76 end:92 pic:3' TGATCTGACACTCGAGGAGCT 5'& ||| ||||.|| &5' -------TGTACA-TCCTTGA 3' Zswim2 mmu-miR-1959 beg:72 end:90 pic:3' GAGGTGACTCGATGTAGGGG 5'& ||||. |||||||.. &5' -TCCATG----TACATCCTT 3' Zswim2 mmu-miR-448 beg:27 end:49 pic:3' TACCCTGTAGGATGTATACGTT 5'& ||| |.||.. |||||||| &5' ATGA-ATATTTA--ATATGCAA 3' Zswim2 mmu-miR-669d beg:53 end:73 pic:3' TGTATATGTACG-TGTGTGTTCA 5'& ||. ||. |||||.||| &5' -----TATTTGTAACACATAAG- 3'

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 Zswim2 mmu-miR-541 59 79 -ACACUGGUUGUAGUCUUAGGGAA ||| || |||| ||||||| UUGUAAC--ACAUAAGAAUCCA-- Zswim2 mmu-miR-541 60 80 ACACUGGUUGUAGUCUUAGGGAa ||| || |||| ||||||| | TGTAAC--ACATAAGAATCCATg

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Zswim2 RAID00126604 mmu-miR-125a-3p miRNA MIMAT0004528 Zswim2 mRNA 71861 Prediction 0.1828 Zswim2 RAID01186024 mmu-miR-153-3p miRNA MIMAT0000163 Zswim2 mRNA 71861 Prediction 0.1828 Zswim2 RAID01560248 mmu-miR-496a-3p miRNA MIMAT0003738 Zswim2 mRNA 71861 Prediction 0.1828 Zswim2 RAID01778785 mmu-miR-181b-5p miRNA MIMAT0000673 Zswim2 mRNA 71861 Prediction 0.1828 Zswim2 RAID03363808 mmu-miR-1198-5p miRNA MIMAT0005859 Zswim2 mRNA 71861 Prediction 0.1828 Zswim2 RAID03382630 mmu-miR-181d-5p miRNA MIMAT0004324 Zswim2 mRNA 71861 Prediction 0.1828 Zswim2 RAID03703404 mmu-miR-181c-5p miRNA MIMAT0000674 Zswim2 mRNA 71861 Prediction 0.1828 Zswim2 RAID03805217 mmu-miR-7116-3p miRNA MIMAT0028130 Zswim2 mRNA 71861 Prediction 0.1828 Zswim2 RAID03929605 mmu-miR-6951-3p miRNA MIMAT0027803 Zswim2 mRNA 71861 Prediction 0.1828 Zswim2 RAID03981372 mmu-miR-129-5p miRNA MIMAT0000209 Zswim2 mRNA 71861 Prediction 0.1828 Zswim2 RAID04002796 mmu-miR-448-3p miRNA MIMAT0001533 Zswim2 mRNA 71861 Prediction 0.2202