DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000129 mmu-miR-30a* 432611 Dnaic2 cgACGUUUGUAGGCU-GACUUUc || | |:||: | |||||| cuUGAUACCGUCUCAUCUGAAAa 2 21 53 75 [mm9:11:114618638-114618660:+] 0.5146 124 6 -12.43 -0.5335 MIMAT0004524 mmu-miR-30b* 432611 Dnaic2 cugcaUUUGUAGGUGU-AGGGUc |:||| ||| ||||| gucagAGACAGGAACACUCCCAu 2 18 492 514 [mm9:11:114596579-114596601:+] 0.5160 121 0 -15.96 -0.2530 MIMAT0000152 mmu-miR-140* 432611 Dnaic2 ggcaccaaGAUGGGACACCAu :| ::||||||| ugccccccUUUUUCUGUGGUu 2 14 864 884 [mm9:11:114596951-114596971:+] 0.5005 145 7 -15.40 -0.6547 MIMAT0004535 mmu-miR-150* 432611 Dnaic2 gauaggggguCCGGACAUGGUc ||::||||||| acuguugauuGGUUUGUACCAc 2 13 791 812 [mm9:11:114596878-114596899:+] 0.5005 152 7 -22.49 -0.3865 MIMAT0000217 mmu-miR-188-5p 432611 Dnaic2 gggAGGUGGUACGUUCCCUAc |:: |::| ||||||| aaaUUUCCUGUUGAAGGGAUu 2 19 531 551 [mm9:11:114596618-114596638:+] 0.5265 150 7 -16.44 -0.3334 MIMAT0004544 mmu-miR-193* 432611 Dnaic2 aguagaACGGGCGU--UUCUGGGu | ||:| | ||||||| ugagaaUCCCUGAAAGAAGACCCc 2 17 577 600 [mm9:11:114596664-114596687:+] 0.4990 147 7 -19.00 -0.1575 MIMAT0000249 mmu-miR-30e* 432611 Dnaic2 cgACAUUUGUAGGCU-GACUUUc || | |:||: | |||||| cuUGAUACCGUCUCAUCUGAAAa 2 21 53 75 [mm9:11:114618638-114618660:+] 0.5146 124 6 -11.38 -0.5335 MIMAT0000375 mmu-miR-297a 432611 Dnaic2 ugUACGUGUACGUGUGUAUGUa | |: ||| ::|||||| uuAGGUUCAU--UUGCAUACAa 2 21 887 906 [mm9:11:114615243-114615262:+] 0.5007 129 6 -12.18 -0.1105 MIMAT0000376 mmu-miR-298 432611 Dnaic2 cccuucuuguCGGGAGGAGACGg | | ||||||| ----------GGCAGCCUCUGCc 2 14 1 13 [mm9:11:114618586-114618598:+] 0.5073 141 7 -21.47 -0.1103 MIMAT0004580 mmu-miR-34c* 432611 Dnaic2 ggaccgacacaccaaUCACUAa |||||| uuauaacauuaaaucAGUGAUa 2 8 587 608 [mm9:11:114619172-114619193:+] 0.5162 120 6 -5.78 -0.2413 MIMAT0004581 mmu-miR-34b-3p 432611 Dnaic2 cuaccgucaccucaaUCACUAa |||||| uuauaacauuaaaucAGUGAUa 2 8 587 608 [mm9:11:114619172-114619193:+] 0.5162 120 6 -5.46 -0.2371 MIMAT0004583 mmu-miR-130b* 432611 Dnaic2 ucAUC--ACGUUGUCCCUUUCUCa ||| ||||| || ||||||| caUAGUAUGCAA-AGAGAAAGAGc 2 21 607 629 [mm9:11:114596694-114596716:+] 0.5009 165 7 -19.39 -0.5075 MIMAT0004622 mmu-let-7c-1* 432611 Dnaic2 ccuuucgaUCUUCCAACAUGUc ||| ||||||| augguaugAGAUAUUUGUACAc 2 15 771 792 [mm9:11:114596858-114596879:+] 0.5010 146 7 -10.07 -0.5823 MIMAT0004628 mmu-miR-21* 432611 Dnaic2 cugucgggUAGCUGACGACAAc || |::||||||| uagggaaaAUGGGUUGCUGUUa 2 15 32 53 [mm9:11:114614388-114614409:+] 0.4834 154 7 -15.50 -0.3404 MIMAT0004631 mmu-miR-29a* 432611 Dnaic2 gacuuGUGGUUUUCUUUAGUCa :|: | | ||||||| cuucuUAUAACAUUAAAUCAGu 2 18 583 604 [mm9:11:114619168-114619189:+] 0.5162 145 7 -11.06 -1.1203 MIMAT0004631 mmu-miR-29a* 432611 Dnaic2 gaCUUGUGGUUUU--C-UUUAGUCa | ||:|| |:: | ||||||| cgGCACGCCCAGGCUGUAAAUCAGu 2 21 139 163 [mm9:11:114614495-114614519:+] 0.4991 150 7 -15.95 -0.1598 MIMAT0004635 mmu-miR-92a* 432611 Dnaic2 caUUACGGUGGUUAGGGGUGGa | | || || |||||||| ccACUACC-CCUCUCCCCACCc 2 21 275 295 [mm9:11:114614631-114614651:+] 0.4905 154 7 -24.82 -0.1575 MIMAT0004640 mmu-miR-325 432611 Dnaic2 aacuauccuccACGAGUUAUUu | :||||||| uugaguuuccuUCUUCAAUAAu 2 12 84 105 [mm9:11:114618669-114618690:+] 0.5146 143 7 -7.75 -0.7607 MIMAT0000569 mmu-miR-330* 432611 Dnaic2 agagaCGUCCGGGA-CACGAAACg |::| :::| ||||||| cacacGUGGUUUUUAUUGCUUUGc 2 19 560 583 [mm9:11:114619145-114619168:+] 0.5162 145 7 -17.41 -0.9453 MIMAT0000569 mmu-miR-330* 432611 Dnaic2 agagaCGUCCGGGACACGAAACg ||||| :|| ||||||| uugagGCAGGAUCU-UGCUUUGc 2 19 712 733 [mm9:11:114615068-114615089:+] 0.5007 164 7 -24.64 -0.2285 MIMAT0004666 mmu-miR-33* 432611 Dnaic2 cacuacgugacaccuUUGUAAc |||||| ugcuuugcuucuuauAACAUUa 2 8 576 597 [mm9:11:114619161-114619182:+] 0.5162 120 6 -5.29 -0.1643 MIMAT0000742 mmu-miR-378* 432611 Dnaic2 uguguccuGGACCUCA-GUCCUc ||| |||| ||||| cucugccuCCU-GAGUACAGGAc 2 15 793 814 [mm9:11:114615149-114615170:+] 0.5007 120 0 -16.70 -0.1884 MIMAT0001090 mmu-miR-409-3p 432611 Dnaic2 uccCCAAGUG--GCUCGUUGUAAg | ||::| | :|||||| auuGCUUUGCUUCUUAUAACAUUa 2 20 574 597 [mm9:11:114619159-114619182:+] 0.5162 126 6 -5.93 -0.1628 MIMAT0004217 mmu-miR-465a-3p 432611 Dnaic2 agauGAAUCUUUCC-GGGA-CUAg :||||| :|| |||| ||| agacUUUAGAUGGGACCCUAGAUu 2 19 274 297 [mm9:11:114618859-114618882:+] 0.5162 129 0 -18.88 -0.4549 MIMAT0004759 mmu-miR-466a-5p 432611 Dnaic2 auACAUGUACAU-GU--GUGUGUAu || | : || || ||||||| guUGAAAGCUUAGCAGCCACACAUa 2 21 209 233 [mm9:11:114614565-114614589:+] 0.5020 142 7 -12.59 -0.6320 MIMAT0002110 mmu-miR-469 432611 Dnaic2 ccuguggUUCUAGUUACUUUC-UCCGu |||: :|| |||| |||| ccuguugAAGG--GAUUAAAGAAGGCu 2 20 537 561 [mm9:11:114596624-114596648:+] 0.5265 120 0 -11.50 -0.2424 MIMAT0002110 mmu-miR-469 432611 Dnaic2 ccUGUGGUUCUAGUUACUUUC-UCCGu |:: |:| ::| |:||| |||| aaAUGGCGACCAUGAGGGAAGCAGGCc 2 25 677 703 [mm9:11:114596764-114596790:+] 0.5009 120 0 -19.48 -0.1170 MIMAT0002111 mmu-miR-470 432611 Dnaic2 ugaGUGGUCACGGUCAGGUUCUu |:||| | | ||||||| ucaCGCCA---CAAUUCCAAGAc 2 21 430 449 [mm9:11:114596517-114596536:+] 0.5055 148 7 -15.42 -0.4795 MIMAT0003166 mmu-miR-546 432611 Dnaic2 cugaGGCACGGUGGUa ::||||||||| uggcUUGUGCCACCAc 2 13 604 619 [mm9:11:114614960-114614975:+] 0.5007 152 7 -22.31 -0.1082 MIMAT0003166 mmu-miR-546 432611 Dnaic2 cuGAGGCACGGUGGUa || | ||||||| caCUGAGAGCCACCAc 2 15 263 278 [mm9:11:114614619-114614634:+] 0.4977 146 7 -15.67 -0.3496 MIMAT0003166 mmu-miR-546 432611 Dnaic2 cugaggcACGGUGGUa |||||||| ggccuaaUGCCACCAu 2 10 820 835 [mm9:11:114615176-114615191:+] 0.5007 145 7 -17.65 -0.6611 MIMAT0003167 mmu-miR-540-3p 432611 Dnaic2 gguccUAGCUGGAGACUGGa :|:| ||||||||| uguaaGUUGUCCUCUGACCu 2 16 197 216 [mm9:11:114596284-114596303:+] 0.5005 159 7 -23.23 -0.1357 MIMAT0003726 mmu-miR-675-3p 432611 Dnaic2 ugacucgCCAA-U-CCCGUAUGUc |||| | ||||||| ucaguuaGGUUCAUUUGCAUACAa 2 16 883 906 [mm9:11:114615239-114615262:+] 0.5007 141 7 -14.12 -1.1436 MIMAT0003731 mmu-miR-671-5p 432611 Dnaic2 gaggucggggAGGUCCCGA-AGGa ||| ||||| ||| uucccaagaaUCCUGGGCUGUCCc 2 14 885 908 [mm9:11:114596972-114596995:+] 0.5006 121 0 -23.85 -0.1949 MIMAT0004822 mmu-miR-770-5p 432611 Dnaic2 gcaccGGGU-CUGUGCACCACGa |:|| ||: ||||||| ccuucCUCAGGAUUGGUGGUGCu 2 18 747 769 [mm9:11:114596834-114596856:+] 0.5012 152 7 -23.15 -0.3170 MIMAT0003891 mmu-miR-770-3p 432611 Dnaic2 ggUCGAGGUGCAGU--CCGGGUGc || || |||| ||||||| ucAGGGACAAGUCACUGGCCCACa 2 21 122 145 [mm9:11:114618707-114618730:+] 0.5154 155 7 -24.26 -0.3334 MIMAT0003736 mmu-miR-670 432611 Dnaic2 aagugguguaUGU-GAGUCCCUa ||| ||||||| auugguggggACAGAUCAGGGAc 2 13 107 129 [mm9:11:114618692-114618714:+] 0.5146 143 7 -14.34 -0.1791 MIMAT0003477 mmu-miR-669a 432611 Dnaic2 uguacUUGUACGUGUGUGUUGa || : |||||||||| accccAAGGCACACACACAACa 2 18 261 282 [mm9:11:114596348-114596369:+] 0.5058 157 7 -18.66 -0.4611 MIMAT0004824 mmu-miR-673-3p 432611 Dnaic2 ccacgUGUCUUGAGUCGGG-GCCu :||| ||| |||| ||| ----gGCAG-CCUCUGCCCACGGc 2 19 1 19 [mm9:11:114618586-114618604:+] 0.5073 120 0 -22.73 -0.2112 MIMAT0003898 mmu-miR-760 432611 Dnaic2 agGGGUGUCUG-GGUCUCGGc |:: : |:| ||||||| gaCUUUUUGGCAGCAGAGCCu 2 19 184 204 [mm9:11:114614540-114614560:+] 0.4991 141 7 -18.20 -0.2376 MIMAT0003740 mmu-miR-674 432611 Dnaic2 auguggugaggGUAGAGUCACg :| ||||||| uuggaacagagUAACUCAGUGg 2 12 492 513 [mm9:11:114614848-114614869:+] 0.5108 143 7 -12.21 -0.1932 MIMAT0003449 mmu-miR-488* 432611 Dnaic2 aacucUCACGAU--AAUAGACCc | ||| | ||||||| ggccuAAUGCCACCAUAUCUGGc 2 17 820 842 [mm9:11:114615176-114615198:+] 0.5007 143 7 -11.09 -0.1058 MIMAT0003466 mmu-miR-687 432611 Dnaic2 aguaaCGACGU-AAGGUC-CUAUc | ||:| ||:||| |||| cuggaGAUGUACUUUCAGAGAUAa 2 18 940 963 [mm9:11:114615296-114615319:+] 0.5009 124 0 -12.25 -0.3503 MIMAT0003471 mmu-miR-692 432611 Dnaic2 cucacucCGCGAGUUUCUCUa |: : |||||||| cuccauaGUAUGCAAAGAGAa 2 15 604 624 [mm9:11:114596691-114596711:+] 0.5009 146 7 -10.66 -0.6174 MIMAT0003476 mmu-miR-669b 432611 Dnaic2 ugUACGUGUACGUGUGUU-UUGa | ||||| ||||||| ||| caAGGCACA--CACACAACAACa 2 21 265 285 [mm9:11:114596352-114596372:+] 0.5058 133 0 -16.74 -0.7536 MIMAT0003476 mmu-miR-669b 432611 Dnaic2 ugUACGUGUACGUGUGUUU-UGa :| ||: ||||:||||| || agGUUCAUUUGCAUACAAAUACc 2 21 889 911 [mm9:11:114615245-114615267:+] 0.5007 136 0 -15.30 -0.5049 MIMAT0003480 mmu-miR-297b-5p 432611 Dnaic2 ugUACAAGUACGUGUGUAUGUa | |||||| ::|||||| uuAGGUUCAU--UUGCAUACAa 2 21 887 906 [mm9:11:114615243-114615262:+] 0.5007 141 6 -14.91 -0.1072 MIMAT0004827 mmu-miR-297b-3p 432611 Dnaic2 auACCCAUACACACAUA-CAUAu | |||: ||| ||| |||| gaUUGGUG-GUGCUUAUGGUAUg 2 21 757 778 [mm9:11:114596844-114596865:+] 0.5015 122 0 -11.66 -0.5373 MIMAT0003495 mmu-miR-705 432611 Dnaic2 acgGGUGGGGUGGAGG-GUGg :| :|: |||||| ||| uugUCCUCUGACCUCCACACa 2 18 203 223 [mm9:11:114596290-114596310:+] 0.5005 121 0 -26.63 -0.2066 MIMAT0003495 mmu-miR-705 432611 Dnaic2 acgGGUGGGGUGGA-GGGUGg |:||||| :|| ||||| ccaCUACCCC-UCUCCCCACc 2 18 275 294 [mm9:11:114614631-114614650:+] 0.4905 127 0 -31.03 -0.1045 MIMAT0003499 mmu-miR-709 432611 Dnaic2 aggagGAC-GGAGAC-GGAGg :|| |||||| |||| guaagUUGUCCUCUGACCUCc 2 15 198 218 [mm9:11:114596285-114596305:+] 0.5005 121 0 -23.52 -0.2459 MIMAT0003499 mmu-miR-709 432611 Dnaic2 agGAGGACGGAGACGGAGg | || :||||||||| ucCACCCAUCUCUGCCUCc 2 18 784 802 [mm9:11:114615140-114615158:+] 0.5007 157 7 -29.55 -0.3264 MIMAT0003512 mmu-miR-450b-3p 432611 Dnaic2 uacguACGUUUUACAAGGGUUa ||:|||| ||||||| ccaucUGUAAAACCUUCCCAAg 2 18 436 457 [mm9:11:114619021-114619042:+] 0.5162 165 7 -14.90 -0.1514 MIMAT0003512 mmu-miR-450b-3p 432611 Dnaic2 uacguACGUUUUACAAGGGUUa | :: ::| ||||||| cuuuuUCUGUGGUUUUCCCAAg 2 18 871 892 [mm9:11:114596958-114596979:+] 0.5005 145 7 -9.25 -0.1894 MIMAT0003711 mmu-miR-652 432611 Dnaic2 guGUUGGGAUCACCGC-GGUAa ||| | | ||||| |||| ucCAAGCAAAAUGGCGACCAUg 2 20 669 690 [mm9:11:114596756-114596777:+] 0.5009 127 0 -16.59 -0.1754 MIMAT0003782 mmu-miR-676 432611 Dnaic2 ucgagUUGUUGGAGU-CCUGCc |: ||:| || ||||| cauaaAGAAAUCACAUGGACGu 2 17 230 251 [mm9:11:114614586-114614607:+] 0.5050 120 0 -13.37 -0.3996 MIMAT0004210 mmu-miR-804 432611 Dnaic2 agguccacuccuUGUUGAGUGu :|||||||| cccaaaauguuuGCAACUCACg 2 11 413 434 [mm9:11:114596500-114596521:+] 0.5055 146 7 -18.62 -0.1598 MIMAT0004844 mmu-miR-880 432611 Dnaic2 agaUGAGUCUCUCCUACCUCAu | |||| |||||||| guaAAUCAG-UUUGAUGGAGUa 2 20 154 174 [mm9:11:114614510-114614530:+] 0.4952 149 7 -19.55 -0.5920 MIMAT0004845 mmu-miR-881* 432611 Dnaic2 ucuacacugacAAUAGAGAGAc ||:||||||| agggguagggcUUGUCUCUCUg 2 12 185 206 [mm9:11:114618770-114618791:+] 0.5162 151 7 -24.31 -0.1465 MIMAT0004845 mmu-miR-881* 432611 Dnaic2 ucuacacugacAAUAGAGAGAc || ||||||| caggggcaagcUUCUCUCUCUc 2 12 407 428 [mm9:11:114618992-114619013:+] 0.5162 147 7 -11.95 -0.3057 MIMAT0004848 mmu-miR-883a-5p 432611 Dnaic2 cauUGACGAUGAAGAGAGUCGu :|| ||:: |||||||| ---GCUCCUGUAGCUCUCAGCc 2 20 1 19 [mm9:11:114596088-114596106:+] 0.4881 159 7 -19.08 -0.1003 MIMAT0004864 mmu-miR-297a* 432611 Dnaic2 auACCCAUACACACAUA-CAUAu | |||: ||| ||| |||| gaUUGGUG-GUGCUUAUGGUAUg 2 21 757 778 [mm9:11:114596844-114596865:+] 0.5015 122 0 -11.66 -0.5373 MIMAT0004865 mmu-miR-297c 432611 Dnaic2 ugUACAUGUACGUGUGUAUGUa | || ||| ::|||||| uuAGGUUCAU--UUGCAUACAa 2 21 887 906 [mm9:11:114615243-114615262:+] 0.5007 133 6 -10.53 -0.1094 MIMAT0004866 mmu-miR-297c* 432611 Dnaic2 auACCCAUACACACAUA-CAUAu | |||: ||| ||| |||| gaUUGGUG-GUGCUUAUGGUAUg 2 21 757 778 [mm9:11:114596844-114596865:+] 0.5015 122 0 -11.66 -0.5373 MIMAT0004867 mmu-miR-327 432611 Dnaic2 uaggaGUACGGGGAGUUCa |||| ||||||| aggucCAUG-ACCUCAAGg 2 15 127 144 [mm9:11:114596214-114596231:+] 0.4987 148 7 -18.83 -0.1718 MIMAT0004868 mmu-miR-343 432611 Dnaic2 agaccCGUGUACUUCCCUCu |:|| ||||||| gguuuGUACCACAAGGGAGa 2 16 801 820 [mm9:11:114596888-114596907:+] 0.5005 147 7 -17.85 -0.2271 MIMAT0004870 mmu-miR-453 432611 Dnaic2 acguucgaGUGAUACUCC-GUUGGa || |:||:|| ||||| acauccagCA-UGUGGGGUCAACCa 2 17 645 668 [mm9:11:114596732-114596755:+] 0.5009 122 0 -18.87 -0.1862 MIMAT0004872 mmu-miR-465b-3p 432611 Dnaic2 agauGAAUCUUUCC-GGGA-CUAg :||||| :|| |||| ||| agacUUUAGAUGGGACCCUAGAUu 2 19 274 297 [mm9:11:114618859-114618882:+] 0.5162 129 0 -18.88 -0.4549 MIMAT0004874 mmu-miR-465c-3p 432611 Dnaic2 agauGAAUCUUUCC-GGGA-CUAg :||||| :|| |||| ||| agacUUUAGAUGGGACCCUAGAUu 2 19 274 297 [mm9:11:114618859-114618882:+] 0.5162 129 0 -18.88 -0.4549 MIMAT0004875 mmu-miR-466b-5p 432611 Dnaic2 guACAUGUACAU-GU--GUGUGUAg || | : || || ||||||| guUGAAAGCUUAGCAGCCACACAUa 2 21 209 233 [mm9:11:114614565-114614589:+] 0.5020 142 7 -12.29 -0.6320 MIMAT0004877 mmu-miR-466c-5p 432611 Dnaic2 auacauguaCGUGUGUGUGUAg ||| ||||||| gaaagcuuaGCAGCCACACAUa 2 14 212 233 [mm9:11:114614568-114614589:+] 0.5050 149 7 -14.88 -0.6382 MIMAT0004879 mmu-miR-466e-5p 432611 Dnaic2 auACAUGUACAU-GU--GUGUGUAg || | : || || ||||||| guUGAAAGCUUAGCAGCCACACAUa 2 21 209 233 [mm9:11:114614565-114614589:+] 0.5020 142 7 -12.10 -0.6320 MIMAT0004881 mmu-miR-466f-5p 432611 Dnaic2 guacguguacGUGUGUGUGCAu :::|||||||| ggacucucccUGUACACACGUg 2 13 546 567 [mm9:11:114619131-114619152:+] 0.5162 148 7 -18.15 -0.5401 MIMAT0004882 mmu-miR-466f-3p 432611 Dnaic2 cacACAUACACACACACAUAc |||:|| |||||||| cccUGUGUGCAAGUGUGUAUc 2 19 683 703 [mm9:11:114615039-114615059:+] 0.5007 162 7 -16.34 -0.2300 MIMAT0004930 mmu-miR-466d-5p 432611 Dnaic2 guacAUGUACAUGCGUGUGUGu | || | :| ||||||| cagaUUCA-GGGCACACACACa 2 19 243 263 [mm9:11:114618828-114618848:+] 0.5162 148 7 -17.42 -0.5678 MIMAT0004930 mmu-miR-466d-5p 432611 Dnaic2 guacauguacaUGCGUGUGUGu | |||||||| auuaaaccccaAGGCACACACa 2 12 256 277 [mm9:11:114596343-114596364:+] 0.5005 147 7 -17.47 -0.4452 MIMAT0004940 mmu-miR-511 432611 Dnaic2 acucACGUCUCGUUUUC-CGUa |||| || :|||| ||| aguaUGCAAAGAGAAAGAGCAu 2 18 610 631 [mm9:11:114596697-114596718:+] 0.5009 129 0 -14.37 -0.5982 MIMAT0005833 mmu-miR-669d 432611 Dnaic2 ugUAUAUGU-ACGUGUGUGU-UCa | || || ||||||||| || ucAGAUUCAGGGCACACACACAGc 2 21 242 265 [mm9:11:114618827-114618850:+] 0.5162 131 0 -18.94 -0.4080 MIMAT0005834 mmu-miR-466i 432611 Dnaic2 aucacACAUACACACACACAUa |||:|| ||||||| agcccUGUGUGCAAGUGUGUAu 2 18 681 702 [mm9:11:114615037-114615058:+] 0.5007 157 7 -16.94 -0.4946 MIMAT0005837 mmu-miR-1187 432611 Dnaic2 aaugUGUGUAU-GUGUGUGUGUAu | :| || || ||||||| uugaAAGCUUAGCAGCCACACAUa 2 20 210 233 [mm9:11:114614566-114614589:+] 0.5050 150 7 -13.31 -0.6308 MIMAT0005841 mmu-miR-669h-5p 432611 Dnaic2 cguGAGUUGAUAUGUGGGUACGUa ||| | | |||||||| uguCUCCCCCUCCCCCCCAUGCAu 2 22 848 871 [mm9:11:114615204-114615227:+] 0.5007 149 7 -18.59 -0.1918 MIMAT0005844 mmu-miR-466f 432611 Dnaic2 uguacguguacGUGUGUGUGCa :::||||||| uggacucucccUGUACACACGu 2 12 545 566 [mm9:11:114619130-114619151:+] 0.5162 143 7 -16.68 -0.5041 MIMAT0005845 mmu-miR-466k 432611 Dnaic2 aguGUACAUGU-ACAUGUGUGUGu || | || | |||||||| acuCAGAUUCAGGGCACACACACa 2 21 240 263 [mm9:11:114618825-114618848:+] 0.5162 151 7 -18.43 -0.5678 MIMAT0005845 mmu-miR-466k 432611 Dnaic2 aguguacaugUACAUGUGUGUGu | | |||||||| uuaaaccccaAGGCACACACACa 2 14 257 279 [mm9:11:114596344-114596366:+] 0.5005 149 7 -18.74 -0.8009 MIMAT0005847 mmu-miR-1190 432611 Dnaic2 cugucuccccUUGGAGUCGACu :| |||||||| gaagcuuccaGAGCUCAGCUGa 2 13 346 367 [mm9:11:114618931-114618952:+] 0.5162 148 7 -21.41 -0.2188 MIMAT0005856 mmu-miR-1195 432611 Dnaic2 acUCGUCCGACCGGAGCUUGAGu :||| | | ||||||| ucGGCAACCCUGAGGCGAACUCa 2 22 222 244 [mm9:11:114618807-114618829:+] 0.5162 145 7 -20.11 -0.2251 MIMAT0007865 mmu-miR-1897-3p 432611 Dnaic2 gaGUGGCCUGUCUUGCUCA-ACu | ::|||: | |||||| || gaCUUUGGAU-GUACGAGUAUGu 2 21 967 988 [mm9:11:114615323-114615344:+] 0.5005 122 0 -18.55 -0.1573 MIMAT0007870 mmu-miR-1900 432611 Dnaic2 acUUCCUGGUC-UCUCCCG-CCGg || | :::| ||||||| ||| aaAAUGCUUGGAAGAGGGCUGGCa 2 21 85 108 [mm9:11:114596172-114596195:+] 0.4951 127 0 -22.17 -0.3106 MIMAT0007873 mmu-miR-1896 432611 Dnaic2 gaggaguggGUGGUAGUCUCUc |||::||||||| guuaagagaCACUGUCAGAGAc 2 14 479 500 [mm9:11:114596566-114596587:+] 0.5055 157 7 -17.55 -0.1416 MIMAT0007873 mmu-miR-1896 432611 Dnaic2 gaggagUGGGUGGUAGUCUCUc |: :||: ||||||| cuggagAUGUACUUUCAGAGAu 2 17 940 961 [mm9:11:114615296-114615317:+] 0.5009 152 7 -14.22 -0.8284 MIMAT0007875 mmu-miR-1898 432611 Dnaic2 cuaGGGGACACU--UGGAACUGGa |||| | |: |:||||||| accCCCCAGGGGGCAUCUUGACCu 2 20 460 483 [mm9:11:114619045-114619068:+] 0.5162 158 7 -27.96 -0.2334 MIMAT0007875 mmu-miR-1898 432611 Dnaic2 cuaggggacacuugGAACUGGa ||||||| ggagagacucacugCUUGACCa 2 9 26 47 [mm9:11:114596113-114596134:+] 0.4881 140 7 -16.06 -0.3602 MIMAT0007875 mmu-miR-1898 432611 Dnaic2 cuaGGGGACACUU----GGA-ACUGGa |:||||| |: ||| ||||| ucaCUCCUGUAAGUUGUCCUCUGACCu 2 20 190 216 [mm9:11:114596277-114596303:+] 0.5005 122 0 -23.92 -0.1160 MIMAT0009396 mmu-miR-1933-5p 432611 Dnaic2 uuugauuCUGGCUUGUGGUACUGa |:: |: ||||||| cuguguuGGUAAAGGUCCAUGACc 2 18 115 138 [mm9:11:114596202-114596225:+] 0.4987 141 7 -13.97 -0.3187 MIMAT0009399 mmu-miR-1935 432611 Dnaic2 ucUCUAGGCGGUCGGAGACGGa || ||| || :||||||| agAGCUCCACCCAUCUCUGCCu 2 21 779 800 [mm9:11:114615135-114615156:+] 0.5007 164 7 -30.63 -0.4022 MIMAT0009408 mmu-miR-1943 432611 Dnaic2 agguCCACGGGUCUA---GGAGGGAa |||| || :| ||||||| caguGGUGAACAUGUCCCCCUCCCUc 2 20 228 253 [mm9:11:114596315-114596340:+] 0.5005 150 7 -21.93 -0.1074 MIMAT0009409 mmu-miR-1944 432611 Dnaic2 uuAGUCUUGAACUGU---AAGUCGU-GUCUc | | || ||| | ||::||| |||| agUAAAAAAGUGAGACUUUUUGGCAGCAGAg 2 26 171 201 [mm9:11:114614527-114614557:+] 0.4952 124 0 -18.95 -0.1531 MIMAT0009418 mmu-miR-669l 432611 Dnaic2 uguauauguacGUGUGUGUUGa |||||||||| accccaaggcaCACACACAACa 2 12 261 282 [mm9:11:114596348-114596369:+] 0.5058 155 7 -18.66 -0.4611 MIMAT0009425 mmu-miR-1954 432611 Dnaic2 uugucccaGAGUGAGACGUCa :|:|:||||||| aaagagcaUUUAUUCUGCAGg 2 14 623 643 [mm9:11:114596710-114596730:+] 0.5009 153 7 -18.47 -0.4377 MIMAT0009442 mmu-miR-1969 432611 Dnaic2 uggguacaauuucAGAGGUAGAa | ||||||| cucucucucucuuUGUCCAUCUg 2 11 420 442 [mm9:11:114619005-114619027:+] 0.5162 142 7 -11.09 -0.6022 MIMAT0009459 mmu-miR-1982* 432611 Dnaic2 ggAGGGGUCCUGGGAGGGUu ||||| |||||||| ugUCCCC--CUCCCUCCCAu 2 19 240 257 [mm9:11:114596327-114596344:+] 0.5005 151 7 -27.53 -0.2520 MIMAT0011210 mmu-miR-2134 432611 Dnaic2 cguggggcAAAGGGUUCUg |||||||||| ucugugguUUUCCCAAGAa 2 12 876 894 [mm9:11:114596963-114596981:+] 0.5005 155 7 -18.21 -0.6534 MIMAT0011211 mmu-miR-2135 432611 Dnaic2 caAAGCCGGGGUUCU-GGAGa ||:||| | ||| |||| uuUUUGGCAGC-AGAGCCUCu 2 19 187 206 [mm9:11:114614543-114614562:+] 0.4991 120 0 -22.57 -0.1280 MIMAT0011212 mmu-miR-2136 432611 Dnaic2 guguagAGUCA--GUUGUGGGUc ||||| :|||||||| auuaaaUCAGUGAUAACACCCA- 2 16 594 615 [mm9:11:114619179-114619200:+] 0.5162 158 7 -19.28 -1.2034 MIMAT0011222 mmu-miR-2146 432611 Dnaic2 guGUACCUUGGGAAGAGGUg || | :: | ||||||| ccCA-GAGGGCAUUCUCCAc 2 19 451 469 [mm9:11:114614807-114614825:+] 0.5009 144 7 -18.83 -0.1388 MIMAT0012774 mmu-miR-664 432611 Dnaic2 auccgaccccucaUUUACUUAu |||||||| gggaccuauagacAAAUGAAUu 2 10 50 71 [mm9:11:114596137-114596158:+] 0.4905 145 7 -8.72 -0.5553 MIMAT0013803 mmu-miR-2861 432611 Dnaic2 ggcgggcggcgGUCCGGGg ||||||| caugagggaagCAGGCCCc 2 9 687 705 [mm9:11:114596774-114596792:+] 0.5009 140 7 -21.17 -0.2091 MIMAT0014853 mmu-miR-3072 432611 Dnaic2 ucUUCCGAAGGACCUCCCCCGu ||| || ||||||| ccAAGCAACCCCCCAGGGGGCa 2 21 453 474 [mm9:11:114619038-114619059:+] 0.5162 144 7 -21.15 -0.1689 MIMAT0015642 mmu-miR-3471 432611 Dnaic2 uuacgGAAUGUCAA--CCUAGAGu :||||| || ||||||| ccccaUUUACAUUUGGGGAUCUCu 2 18 621 644 [mm9:11:114614977-114615000:+] 0.5007 160 7 -16.41 -0.1464 MIMAT0015642 mmu-miR-3471 432611 Dnaic2 uuacggAAUGUCA--ACCUAGAGu | :| || |||||||| cuccaaUAGCUGUCCUGGAUCUCu 2 17 657 680 [mm9:11:114615013-114615036:+] 0.5007 147 7 -14.77 -0.2357 MIMAT0000121 mmu-let-7g 432611 Dnaic2 uugacauGUUUG-AUG-AUGGAGu ||| | ||| |||||| acaaacuCAAUCUUACAUACCUCc 2 16 385 408 [mm9:11:114596472-114596495:+] 0.5075 122 6 -14.38 -0.3869 MIMAT0000122 mmu-let-7i 432611 Dnaic2 uugUCGUGUUUG-AUG-AUGGAGu | | ||| | ||| |||||| acaAACUCAAUCUUACAUACCUCc 2 20 385 408 [mm9:11:114596472-114596495:+] 0.5075 126 6 -14.10 -0.3869 MIMAT0000124 mmu-miR-15b 432611 Dnaic2 acAUUUGGUACUACACGA-CGAu |: || | ||||||| ||| gaUGUACGAGUAUGUGCUGGCUu 2 21 974 996 [mm9:11:114615330-114615352:+] 0.5003 128 0 -15.37 -0.7849 MIMAT0000126 mmu-miR-27b 432611 Dnaic2 cgUCU-UGAAUCGGUGAC-ACUu ||| |:||: ||||| ||| ugAGAUAUUUGUACACUGUUGAu 2 20 777 799 [mm9:11:114596864-114596886:+] 0.5010 126 0 -14.28 -0.4976 MIMAT0000127 mmu-miR-29b 432611 Dnaic2 uuGUGACUAAAGUUUACCACGAu | | |: || ::||||||| ucCUCAGGAUU--GGUGGUGCUu 2 22 750 770 [mm9:11:114596837-114596857:+] 0.5012 146 7 -15.92 -0.2391 MIMAT0000150 mmu-miR-138 432611 Dnaic2 gccGGACUAAGU---GU-UGUG-GUCGa :| |||||| || |||| |||| aacUCAGAUUCAGGGCACACACACAGCc 2 21 239 266 [mm9:11:114618824-114618851:+] 0.5162 126 0 -17.67 -0.3250 MIMAT0000157 mmu-miR-145 432611 Dnaic2 uccCUAAGGACCCU-UUUGACCUg |:| | ||| :||||||| guaGGUAGGUAGGAUGAACUGGAc 2 21 526 549 [mm9:11:114619111-114619134:+] 0.5162 151 7 -19.44 -0.1407 MIMAT0000224 mmu-miR-194 432611 Dnaic2 aggUGUACCUCAACGACAAUGu | |||| ||||||||||| ggaAAAUGG-GUUGCUGUUACa 2 20 35 55 [mm9:11:114614391-114614411:+] 0.4834 173 7 -25.46 -0.1664 MIMAT0000235 mmu-miR-202-3p 432611 Dnaic2 agaaGGGUACGCGAUAUGGAGa :| || : ||||||| aaacUCAAUCUUACAUACCUCc 2 19 387 408 [mm9:11:114596474-114596495:+] 0.5075 142 7 -12.89 -0.3096 MIMAT0000246 mmu-miR-122 432611 Dnaic2 guuugugguaacagUGUGAGGu ||||||| ugucagagacaggaACACUCCc 2 9 491 512 [mm9:11:114596578-114596599:+] 0.5055 140 7 -17.54 -0.3827 MIMAT0000383 mmu-let-7d 432611 Dnaic2 uugauacGUU-GGAUG-AUGGAGa ||| |:||| |||||| acaaacuCAAUCUUACAUACCUCc 2 16 385 408 [mm9:11:114596472-114596495:+] 0.5075 126 6 -18.35 -0.3838 MIMAT0000521 mmu-let-7a 432611 Dnaic2 uugauauGUU-GGAUG-AUGGAGu ||| |:||| |||||| acaaacuCAAUCUUACAUACCUCc 2 16 385 408 [mm9:11:114596472-114596495:+] 0.5075 126 6 -17.78 -0.3838 MIMAT0000522 mmu-let-7b 432611 Dnaic2 uuggUGUGUU-GGAUG-AUGGAGu || ||| |:||| |||||| acaaACUCAAUCUUACAUACCUCc 2 19 385 408 [mm9:11:114596472-114596495:+] 0.5075 133 6 -18.24 -0.3869 MIMAT0000523 mmu-let-7c 432611 Dnaic2 uugguauGUU-GGAUG-AUGGAGu ||| |:||| |||||| acaaacuCAAUCUUACAUACCUCc 2 16 385 408 [mm9:11:114596472-114596495:+] 0.5075 126 6 -16.81 -0.3838 MIMAT0000525 mmu-let-7f 432611 Dnaic2 uugauauGUUAG-AUG-AUGGAGu ||||| ||| |||||| acaaacuCAAUCUUACAUACCUCc 2 16 385 408 [mm9:11:114596472-114596495:+] 0.5075 130 6 -18.05 -0.3869 MIMAT0000526 mmu-miR-15a 432611 Dnaic2 guguuUGGUAAUACACGA-CGAu || | |||||||| ||| gauguACGAGUAUGUGCUGGCUu 2 18 974 996 [mm9:11:114615330-114615352:+] 0.5003 133 0 -18.37 -0.7849 MIMAT0000527 mmu-miR-16 432611 Dnaic2 gcgguuauaaAUGCACGA-CGAu ||:||||| ||| gauguacgagUAUGUGCUGGCUu 2 13 974 996 [mm9:11:114615330-114615352:+] 0.5003 120 0 -18.20 -0.7812 MIMAT0000535 mmu-miR-29a 432611 Dnaic2 auuggCUAAAGUCUACCACGAu |||| |:||||||| cucagGAUU---GGUGGUGCUu 2 18 752 770 [mm9:11:114596839-114596857:+] 0.5012 149 7 -16.85 -0.2391 MIMAT0000536 mmu-miR-29c 432611 Dnaic2 auuggCUAAAGUUUACCACGAu |||| ::||||||| cucagGAUU---GGUGGUGCUu 2 18 752 770 [mm9:11:114596839-114596857:+] 0.5012 145 7 -14.96 -0.2391 MIMAT0000537 mmu-miR-27a 432611 Dnaic2 cgcCU-UGAAUCGGUGAC-ACUu || |:||: ||||| ||| ugaGAUAUUUGUACACUGUUGAu 2 19 777 799 [mm9:11:114596864-114596886:+] 0.5010 121 0 -13.33 -0.4976 MIMAT0000545 mmu-miR-98 432611 Dnaic2 uugUUAUGUU-GAAUG-AUGGAGu || ||| ||||| |||||| acaAACUCAAUCUUACAUACCUCc 2 20 385 408 [mm9:11:114596472-114596495:+] 0.5075 134 6 -18.40 -0.3838 MIMAT0000559 mmu-miR-326 432611 Dnaic2 ugaccuccuucccGGGUCUCc ||||||| auauugucuuaacCCCAGAGg 2 9 438 458 [mm9:11:114614794-114614814:+] 0.5009 140 7 -18.05 -0.1017 MIMAT0004642 mmu-miR-330 432611 Dnaic2 cggauuCUGUGUCCGGGUCUCu | | :| ||||||| cauauuGUCUUAACCCCAGAGg 2 17 437 458 [mm9:11:114614793-114614814:+] 0.5009 144 7 -18.25 -0.1007 MIMAT0000653 mmu-miR-28 432611 Dnaic2 gaGUUAUCUGACACUCGAG-GAa :|:|||: | |||||| || gaUAGUAGG-AGAGAGCUCACUc 2 21 174 195 [mm9:11:114596261-114596282:+] 0.5003 122 0 -18.36 -0.2852 MIMAT0000664 mmu-miR-219 432611 Dnaic2 ucuUAACGCAAACCUGU-UAGu |||| || ||||| ||| auuAUUG-GUGGGGACAGAUCa 2 19 104 124 [mm9:11:114618689-114618709:+] 0.5146 124 0 -17.91 -0.2423 MIMAT0000666 mmu-miR-320 432611 Dnaic2 agcgggaGAGUUGGGUC-GAAAa ||:|| :||| |||| acacagcCUUAAGUCAGACUUUa 2 16 259 281 [mm9:11:114618844-114618866:+] 0.5162 123 0 -13.67 -0.3559 MIMAT0000677 mmu-miR-7a 432611 Dnaic2 uguuguuUUAGUGAUCAGA-AGGu |:|| :|||||| ||| gcuuugcAGUC-UUAGUCUGUCCu 2 17 727 749 [mm9:11:114615083-114615105:+] 0.5007 122 0 -14.92 -0.3430 MIMAT0000711 mmu-miR-365 432611 Dnaic2 uauuccuaaaaaUC-CCCGUAAu || ||||||| ugucuuaaccccAGAGGGCAUUc 2 11 442 464 [mm9:11:114614798-114614820:+] 0.5009 141 7 -11.33 -0.2124 MIMAT0003130 mmu-miR-486 432611 Dnaic2 gagccCCGUCGAGUCAUGUCCu | | || |||||||| ucucuGCCUCCUGAGUACAGGa 2 18 792 813 [mm9:11:114615148-114615169:+] 0.5007 153 7 -21.78 -0.4431 MIMAT0003456 mmu-miR-495 432611 Dnaic2 uucuuCACGUGGUACAAACAAa |||:|:| |||||||| caaguGUGUAUC-UGUUUGUUu 2 18 692 712 [mm9:11:114615048-114615068:+] 0.5007 163 7 -20.96 -0.4217 MIMAT0003482 mmu-miR-499 432611 Dnaic2 uuUGUAGUGACGU-UCAGAAUu |: |::|| :: ||||||| ggAUCUUGCUUUGCAGUCUUAg 2 20 720 741 [mm9:11:114615076-114615097:+] 0.5007 150 7 -14.96 -0.1189 MIMAT0004828 mmu-miR-708 432611 Dnaic2 ggGUCGAUCUAACAUU-CGAGGAa |||: || | || |||||| gcCAGUCAGCCAGCAAUGCUCCUu 2 22 329 352 [mm9:11:114596416-114596439:+] 0.5111 125 6 -19.80 -0.1988 MIMAT0004853 mmu-miR-874 432611 Dnaic2 agccaggGAG-CCCGGUCCCGUc ||| | :||||||| aggcgaaCUCAGAUUCAGGGCAc 2 16 234 256 [mm9:11:114618819-114618841:+] 0.5162 146 7 -20.75 -0.4278 MIMAT0004853 mmu-miR-874 432611 Dnaic2 agccagggagccCGGUCCCGUc |:||||||| uccuggccagauGUCAGGGCAg 2 11 830 851 [mm9:11:114596917-114596938:+] 0.5005 146 7 -26.53 -0.1246 MIMAT0004854 mmu-miR-876-5p 432611 Dnaic2 aucACUAAG-UGUCUCUU-UAGGu | |||| :||| ||| |||| cauUUAUUCUGCAG-GAACAUCCa 2 20 629 651 [mm9:11:114596716-114596738:+] 0.5009 124 0 -15.60 -0.2235 MIMAT0004869 mmu-miR-421 432611 Dnaic2 cgcggguuaaUUACA-GACAACUa ||| | ||||||| guaaggaggaAAUUUCCUGUUGAa 2 14 522 545 [mm9:11:114596609-114596632:+] 0.5265 148 7 -8.65 -0.4447 MIMAT0004869 mmu-miR-421 432611 Dnaic2 cgcggguUAAUUA-CAGACAACUa ||| :| ||||||| augagauAUUUGUACACUGUUGAu 2 17 776 799 [mm9:11:114596863-114596886:+] 0.5010 143 7 -12.47 -0.6894 MIMAT0005850 mmu-miR-1192 432611 Dnaic2 uuaaacCAGACAAACAAACAAa || | | |||||||| gcaaguGUGUAUCUGUUUGUUu 2 17 691 712 [mm9:11:114615047-114615068:+] 0.5007 156 7 -14.63 -0.4249

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G072262 Dnaic2 Mus musculus 432611

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Dnaic2 mmu-miR-3072 beg:459 end:475 pic:3' TCTTCCGAAGGACCTCCCCCGT 5'& || |||||||| &5' ---------CCCCCAGGGGGCA 3' Dnaic2 mmu-miR-1962 beg:0 end:11 pic:3' TACACAGGGTCACGGTCGGAGA 5'& | |||||||| &5' ------------GGCAGCCTCT 3' Dnaic2 mmu-miR-874 beg:238 end:256 pic:3' AGCCAGGGAG-CCCGGTCCCGTC 5'& ||| | .||||||| &5' -------CTCAGATTCAGGGCA- 3' Dnaic2 mmu-miR-331-3p beg:461 end:472 pic:3' AAGATCCTATCCGGGTCCCCG 5'& |||||||| &5' ------------CCCAGGGG- 3' Dnaic2 mmu-miR-298 beg:364 end:381 pic:3' CCCTTCTTGTCGGGAGGAGACGG 5'& |||.| |||||||| &5' ---------AGCTCACCTCTGCC 3' Dnaic2 mmu-miR-298 beg:0 end:14 pic:3' CCCTTCTTGTCGGGAGGAGACGG 5'& .|| |||||||| &5' ---------GGCAG-CCTCTGCC 3' Dnaic2 mmu-miR-1935 beg:365 end:381 pic:3' TCTCTAGGCGGTCGGAGACGGA 5'& ||. |||||||| &5' --------GCTCACCTCTGCC- 3' Dnaic2 mmu-miR-1935 beg:0 end:14 pic:3' TCTCTAGGCGGTCGGAGACGGA 5'& | ||||||||||| &5' --------GGCAGCCTCTGCC- 3' Dnaic2 mmu-miR-1898 beg:468 end:484 pic:3' CTAGGGGACACT-TGGAACTGGA 5'& |. |.|||||||| &5' ----------GGCATCTTGACCT 3' Dnaic2 mcmv-miR-M23-2 beg:498 end:516 pic:3' GGCGAACTGGCTC-CGGGGGTA 5'& |.| |.| ||||||| &5' ------GGCGGGGCGCCCCCA- 3' Dnaic2 mmu-miR-770-3p beg:126 end:145 pic:3' GGTCGAGGTGCAGT--CCGGGTGC 5'& || |||| ||||||| &5' -------CAAGTCACTGGCCCAC- 3' Dnaic2 mcmv-miR-m59-1 beg:190 end:211 pic:3' GACTGCC-AGCTCCGTGACGATT 5'& || |.| | ||||||| &5' -----GGCTTGTCTCTCTGCTAA 3' Dnaic2 mghv-miR-M1-3 beg:354 end:377 pic:3' TTCGCGTTGAGGACGAGTGGAG 5'& .||| ||.|| ||||||||| &5' GAGCTCAGCTGA-GCTCACCTC 3' Dnaic2 mmu-miR-1190 beg:351 end:368 pic:3' CTGTCTCCCCTTGGAGTCGACT 5'& ||||| ||||||||| &5' --CAGAG------CTCAGCTGA 3' Dnaic2 mmu-miR-1191 beg:178 end:197 pic:3' ATCCCGATGTATCATTCTGAC 5'& ||| .|||.|.|| &5' --GGGAAGG--GGTAGGGCT- 3' Dnaic2 mmu-miR-1199 beg:228 end:252 pic:3' GGCG-CGC-TGGCCCTGAGTCT 5'& |.| ||| ||. ||.||||. &5' CTGAGGCGAACTCAGATTCAGG 3' Dnaic2 mmu-miR-125a-5p beg:107 end:129 pic:3' AGTGTCCAATTTCCCAG---AGTCCCT 5'& ||| .||| ||||||| &5' -----GGT---GGGGACAGATCAGGGA 3' Dnaic2 mmu-miR-125b-3p beg:322 end:345 pic:3' TCGAGGGTTCTCGGATT-GGGCA 5'& ||.| ||||| |||| .|| &5' AGTTACCAAG-GCCTTTTTCC-- 3' Dnaic2 mmu-miR-125b-5p beg:109 end:129 pic:3' AGTGTTCAATCCCAG---AGTCCCT 5'& |.||| ||||||| &5' --------TGGGGACAGATCAGGGA 3' Dnaic2 mmu-miR-151-3p beg:262 end:287 pic:3' GGAGTTCC-TC-GGAGTCAGATC 5'& |||.||| || |.|.|| |.| &5' CCTTAAGTCAGACTTTAGA-TGG 3' Dnaic2 mmu-miR-184 beg:413 end:439 pic:3' TGGGAATAGTCA-AGAGGCAGGT 5'& .|. | || |||..||||| &5' GCTTCTCTCTCTCTCTTTGTCCA 3' Dnaic2 mmu-miR-185 beg:407 end:428 pic:3' AGTCCTTGA-CGGAAAGAGAGGT 5'& |||..| ||.| ||||||. &5' --AGGGGCAAGCTTCTCTCTCT- 3' Dnaic2 mmu-miR-1893 beg:385 end:408 pic:3' GCTCCGCAGG--TCGCGGGCGCGG 5'& |.||| ||. ||||||.|| | &5' -GGGGCCTCTGGAGCGCCTGCAC- 3' Dnaic2 mmu-miR-1897-5p beg:421 end:442 pic:3' GGGGGAGAAAGAGGTAGGTTTC 5'& |.|.|||||| ||||||. &5' CTCTCTCTTTGTCCATCT---- 3' Dnaic2 mmu-miR-1941-5p beg:1 end:29 pic:3' TTCGGAGACATG-GTCGT-AGAGGGA 5'& |||||||| | |.||| | ||||| &5' -AGCCTCTGCCCACGGCACTGTCCCT 3' Dnaic2 mmu-miR-1942 beg:56 end:73 pic:3' GTTGGTCTACTTCTGTAGACT 5'& |||. ||||||| &5' --ACCGTCT-----CATCTGA 3' Dnaic2 mmu-miR-1960 beg:3 end:24 pic:3' TCGGGAGAAGATTGTCGTGACC 5'& ||||| ||.|||||| &5' ---CCTCTGCCCACGGCACTG- 3' Dnaic2 mmu-miR-1962 beg:209 end:224 pic:3' TACACAGGGTCACGGTCGGAGA 5'& |||| ||.||||| &5' -----TCCC----CCGGCCTC- 3' Dnaic2 mmu-miR-1969 beg:419 end:442 pic:3' TGGGTACAATTTCAGAGGTAGAA 5'& |.| | ||||||| &5' -CTCTCTCTCTT-TGTCCATCT- 3' Dnaic2 mmu-miR-1982star beg:436 end:457 pic:3' GGAGGGGTCCTGGGAGGGTT 5'& ||. .| |||.|||||| &5' --TCTGTAAAACCTTCCCAA 3' Dnaic2 mmu-miR-1982star beg:445 end:469 pic:3' GGAGGGGTCC--TGGGAGGGTT 5'& |||.|||| | |||| ||||. &5' CCTTCCCAAGCAACCC-CCCAG 3' Dnaic2 mmu-miR-1982star beg:458 end:479 pic:3' GGAGGGGTCCTGGG-AGGGTT 5'& || |||||||. | ||. | &5' CC-CCCCAGGGGGCATCTTGA 3' Dnaic2 mmu-miR-2135 beg:327 end:341 pic:3' CAAAGCCGGGGTTCTGGAGA 5'& |||||.|||.| &5' ---------CCAAGGCCTTT 3' Dnaic2 mmu-miR-24 beg:348 end:371 pic:3' GACAAGGA--CGACTTGACTCGGT 5'& |||| ||| |.||||||. &5' ---TTCCAGAGCTCAGCTGAGCT- 3' Dnaic2 mmu-miR-24-2star beg:515 end:537 pic:3' TGACAAAG-TCGAGTCATCCGTG 5'& ||| ||. .|||||.| &5' --TGTGGAGAGTA-GGTAGGTA- 3' Dnaic2 mmu-miR-27astar beg:346 end:372 pic:3' ACGAGTGT-TCG--TCGATTCGGGA 5'& ||| || ||| ||||.|||.| &5' -GCTTCCAGAGCTCAGCTGAGCTC- 3' Dnaic2 mmu-miR-27bstar beg:350 end:372 pic:3' CAAGTGGTT---AGTCGATTCGAGA 5'& |||. ||||||.||||| &5' -----CCAGAGCTCAGCTGAGCTC- 3' Dnaic2 mmu-miR-2861 beg:6 end:28 pic:3' GGCGGGCGGCGGTCCGGGG 5'& |.|||| | || |.||| &5' CTGCCCACGGCACTGTCCC 3' Dnaic2 mmu-miR-300star beg:83 end:102 pic:3' TGTTTCCTATT-GGAGAGAAGTT 5'& || ||| ||||||| &5' ------GAGTTTCCT-TCTTCAA 3' Dnaic2 mmu-miR-3072 beg:483 end:504 pic:3' TCTTCCGAAGGACC-TCCCCCGT 5'& ||. | || .|||||| &5' ----GGTCACACGGTGGGGGGC- 3' Dnaic2 mmu-miR-30estar beg:58 end:75 pic:3' CGACATTTGTAGGCT-GACTTTC 5'& |.||. |||||| &5' --------CGTCTCATCTGAAA- 3' Dnaic2 mmu-miR-328 beg:135 end:154 pic:3' TGCCTTCCCGTCTCT--CCCGGTC 5'& ||| |||||| &5' -------GGCCCACACTGGGCCA- 3' Dnaic2 mmu-miR-330star beg:562 end:584 pic:3' AGAGACGTCCGGGAC--ACGAAACG 5'& |. ||...| |||||||| &5' -----GT-GGTTTTTATTGCTTTGC 3' Dnaic2 mmu-miR-335-5p beg:560 end:582 pic:3' TGTAAAAAGCAATAACGAGAACT 5'& ||.| ||. ||||||||.| &5' ACGTGGTTT-TTATTGCTTT--- 3' Dnaic2 mmu-miR-339-3p beg:18 end:38 pic:3' GCCGAGACAGCGGCTCCGCGAGT 5'& ||||| || |.||||| &5' -----CTGTC-CCTTCGTGCTCA 3' Dnaic2 mmu-miR-3473 beg:408 end:426 pic:3' CCGACTCGGTAGAGAGGT 5'& ||| |||. ||||||. &5' GGCA-AGCT-TCTCTCT- 3' Dnaic2 mmu-miR-3473 beg:534 end:555 pic:3' CCGACTCGGTA-GAGAGGT 5'& || ||| |.. |||||| &5' GGATGAACTGGACTCTCC- 3' Dnaic2 mmu-miR-3473 beg:360 end:378 pic:3' CCGACTCG-GTAGAGAGGT 5'& ||||||| || |||| | &5' -GCTGAGCTCACCTCTGC- 3' Dnaic2 mmu-miR-3475 beg:340 end:356 pic:3' AAGTTTGGTACACGGAGGTCT 5'& ||| ||.|||||| &5' ------CCAGAAGCTTCCAGA 3' Dnaic2 mmu-miR-34a beg:0 end:26 pic:3' TGTTGGT--CGATT-CTGTGACGGT 5'& .||.|| || |.|||||.| &5' GCAGCCTCTGCCCACGGCACTGTC- 3' Dnaic2 mmu-miR-34c beg:5 end:26 pic:3' CGTTAGTCGATTGATGTGACGGA 5'& || || || .|||||.| &5' ----TCTGCCCACGGCACTGTC- 3' Dnaic2 mmu-miR-351 beg:107 end:129 pic:3' GTCCGAGTTTCCCGAGG-AGTCCCT 5'& ||. .||| ||||||| &5' --GGT----GGGGACAGATCAGGGA 3' Dnaic2 mmu-miR-423-5p beg:18 end:30 pic:3' TTTCAGAGCGAGAGACGGGGAGT 5'& |||.||||. &5' -------------CTGTCCCTT- 3' Dnaic2 mmu-miR-431star beg:392 end:414 pic:3' TCTTCG-GGACGT-TCTGCTGGAC 5'& |.||| |||||| ||. |.| &5' -GGAGCGCCTGCACAGG-GGC--- 3' Dnaic2 mmu-miR-449a beg:2 end:26 pic:3' TGGT--CGATTGTTATGTGACGGT 5'& .|| || || .|||||.| &5' GCCTCTGCCCACG--GCACTGTC- 3' Dnaic2 mmu-miR-449c beg:3 end:26 pic:3' GGTCGAT--CGTTA--CGTGACGGA 5'& ||| || ||||||.| &5' --AGCCTCTGCCCACGGCACTGTC- 3' Dnaic2 mmu-miR-450a-3p beg:438 end:457 pic:3' TACTTACGTTTCGTAGGGGTTA 5'& ||.||| | |.||||| &5' -----TGTAAAACCTTCCCAA- 3' Dnaic2 mmu-miR-450b-3p beg:438 end:457 pic:3' TACGTACGTTTTACAAGGGTTA 5'& ||.|||| ||||||| &5' -----TGTAAAACCTTCCCAA- 3' Dnaic2 mmu-miR-450b-5p beg:426 end:448 pic:3' ATAAGTC-CTTGTATGACGTTTT 5'& || | ||| |||.|||| &5' ---TCTTTGTCCAT-CTGTAAAA 3' Dnaic2 mmu-miR-453 beg:0 end:9 pic:3' ACGTTCGAGTGATACTCCGTTGGA 5'& ||||.||| &5' ----------------GGCAGCCT 3' Dnaic2 mmu-miR-483 beg:417 end:442 pic:3' GAGGGA-AGAGAAGAGGGCAGAA 5'& |||.|| ||||||. || ||| &5' CTCTCTCTCTCTTTGTCCATCT- 3' Dnaic2 mmu-miR-485 beg:246 end:269 pic:3' CTTAAGTAGTGCCG-------GTCGGAGA 5'& ||| ||| ||||||. &5' -------TCAGGGCACACACACAGCCTT- 3' Dnaic2 mmu-miR-532-3p beg:483 end:503 pic:3' ACGTTCGGAACCCACACCCTCC 5'& .|.| |||||.|| &5' ----GGTCACACG-GTGGGGGG 3' Dnaic2 mmu-miR-615-5p beg:282 end:293 pic:3' CTAGGCTCGTGGCCCCTGGGGG 5'& |||||||. &5' -------------GGGACCCT- 3' Dnaic2 mmu-miR-669a beg:248 end:266 pic:3' TGTACTTGTACGTGTGTGTTGA 5'& |..|| ||||||||.| &5' ----GGGCA--CACACACAGC- 3' Dnaic2 mmu-miR-669l beg:246 end:266 pic:3' TGTATATGTACGTGTGTGTTGA 5'& || .|| ||||||||.| &5' -CAGG-GCA--CACACACAGC- 3' Dnaic2 mmu-miR-672 beg:251 end:270 pic:3' AGTGTGTGTCATGTGGTTGGAGT 5'& |||||||| ||.|||.| &5' -CACACACA------CAGCCTTA 3' Dnaic2 mmu-miR-702 beg:174 end:196 pic:3' CTCGCCCCATTTCCCA-CCCGT 5'& |.|.||| ||.|||| |||| &5' GGGTGGG--AAGGGGTAGGGC- 3' Dnaic2 mmu-miR-741 beg:186 end:205 pic:3' AGATGTATCTTA-CCG--TAGAGAGT 5'& .|. ||| .|||||| &5' -------GGGTAGGGCTTGTCTCTC- 3' Dnaic2 mmu-miR-742 beg:551 end:574 pic:3' AAATGGGTCGTAC---CACCGAAAG 5'& ||| |.| ||||.|||. &5' ----CCCTGTACACACGTGGTTTTT 3' Dnaic2 mmu-miR-744 beg:541 end:560 pic:3' ACGACAATCGGGATCGGGGCGT 5'& ||| |.|| |||.|.| &5' --CTGGA--CTCT--CCCTGTA 3' Dnaic2 mmu-miR-760 beg:338 end:361 pic:3' AGGGGTG-TCT-GGGTCTCGGC 5'& | ||| || .|||||||. &5' TTTCCAGAAGCTTCCAGAGCT- 3' Dnaic2 mmu-miR-764-3p beg:378 end:395 pic:3' TGTCAACGGTGATACCGGAGGA 5'& |||| ||||||. &5' -------CCACAGGGGCCTCT- 3' Dnaic2 mmu-miR-879 beg:319 end:341 pic:3' CCGAATC-TCGATA--TTCGGAGA 5'& || ||.|| |.||||.| &5' -----AGTAGTTACCAAGGCCTTT 3' Dnaic2 mmu-miR-881star beg:184 end:207 pic:3' TCTACACTGACAATAGAGAGAC 5'& .|.| |.|| |.|||||||| &5' GGGTAGGGCT--TGTCTCTCTG 3' Dnaic2 mmu-miR-881star beg:408 end:426 pic:3' TCTACACTGACAATAGAGAGAC 5'& |.| ||||||| &5' ------GGCAAGCTTCTCTCT- 3' Dnaic2 mmu-miR-882 beg:409 end:430 pic:3' TGATTACG--CGATT-GAGAGAGGA 5'& || ||| |||||||. &5' ------GCAAGCTTCTCTCTCTCT- 3' Dnaic2 mmu-miR-9 beg:319 end:336 pic:3' AGTATGTCGATCTATTGGTTTCT 5'& || ||| |||||.| &5' ------AG-TAGTT-ACCAAGG- 3' Dnaic2 mmu-miR-670 beg:114 end:129 pic:3' AAGTGGTGTATGTG-AGTCCCTA 5'& ||| ||||||| &5' ----------ACAGATCAGGGA- 3'

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Dnaic2 RAID00079162 mmu-miR-7a-5p miRNA MIMAT0000677 Dnaic2 mRNA 432611 Prediction 0.1828 Dnaic2 RAID00082157 mmu-miR-326-3p miRNA MIMAT0000559 Dnaic2 mRNA 432611 Prediction 0.1828 Dnaic2 RAID00099555 mmu-miR-28a-5p miRNA MIMAT0000653 Dnaic2 mRNA 432611 Prediction 0.1828 Dnaic2 RAID00238192 mmu-miR-15a-5p miRNA MIMAT0000526 Dnaic2 mRNA 432611 Prediction 0.1828 Dnaic2 RAID00325964 mmu-miR-421-3p miRNA MIMAT0004869 Dnaic2 mRNA 432611 Prediction 0.1828 Dnaic2 RAID00362239 mmu-miR-486a-5p miRNA MIMAT0003130 Dnaic2 mRNA 432611 Prediction 0.1828 Dnaic2 RAID00414749 mmu-miR-27b-3p miRNA MIMAT0000126 Dnaic2 mRNA 432611 Prediction 0.1828 Dnaic2 RAID00434131 mmu-miR-29a-5p miRNA MIMAT0004631 Dnaic2 mRNA 432611 Prediction 0.1828 Dnaic2 RAID00500031 mmu-miR-6912-5p miRNA MIMAT0027724 Dnaic2 mRNA 432611 Prediction 0.1828 Dnaic2 RAID00564243 mmu-let-7g-5p miRNA MIMAT0000121 Dnaic2 mRNA 432611 Prediction 0.1828 Dnaic2 RAID00564945 mmu-miR-15b-5p miRNA MIMAT0000124 Dnaic2 mRNA 432611 Prediction 0.1828 Dnaic2 RAID00582095 mmu-miR-708-5p miRNA MIMAT0004828 Dnaic2 mRNA 432611 Prediction 0.1828 Dnaic2 RAID00887523 mmu-miR-876-5p miRNA MIMAT0004854 Dnaic2 mRNA 432611 Prediction 0.1828 Dnaic2 RAID00928227 mmu-miR-138-5p miRNA MIMAT0000150 Dnaic2 mRNA 432611 Prediction 0.1828 Dnaic2 RAID00988118 mmu-miR-6240 miRNA MIMAT0024861 Dnaic2 mRNA 432611 Prediction 0.1828 Dnaic2 RAID01231540 mmu-miR-6416-3p miRNA MIMAT0025171 Dnaic2 mRNA 432611 Prediction 0.1828 Dnaic2 RAID01247946 mmu-miR-495-3p miRNA MIMAT0003456 Dnaic2 mRNA 432611 Prediction 0.1828 Dnaic2 RAID01295845 mmu-miR-6405 miRNA MIMAT0025157 Dnaic2 mRNA 432611 Prediction 0.1828 Dnaic2 RAID01446790 mmu-miR-219a-5p miRNA MIMAT0000664 Dnaic2 mRNA 432611 Prediction 0.1828 Dnaic2 RAID01453466 mmu-let-7c-5p miRNA MIMAT0000523 Dnaic2 mRNA 432611 Prediction 0.1828 Dnaic2 RAID01477574 mmu-miR-1192 miRNA MIMAT0005850 Dnaic2 mRNA 432611 Prediction 0.1828 Dnaic2 RAID01769338 mmu-miR-16-5p miRNA MIMAT0000527 Dnaic2 mRNA 432611 Prediction 0.1828 Dnaic2 RAID01795152 mmu-miR-29c-3p miRNA MIMAT0000536 Dnaic2 mRNA 432611 Prediction 0.1828 Dnaic2 RAID01907212 mmu-miR-7235-3p miRNA MIMAT0028439 Dnaic2 mRNA 432611 Prediction 0.1828 Dnaic2 RAID01934534 mmu-miR-365-3p miRNA MIMAT0000711 Dnaic2 mRNA 432611 Prediction 0.1828 Dnaic2 RAID01987987 mmu-miR-194-5p miRNA MIMAT0000224 Dnaic2 mRNA 432611 Prediction 0.1828 Dnaic2 RAID02049261 mmu-miR-320-3p miRNA MIMAT0000666 Dnaic2 mRNA 432611 Prediction 0.1828 Dnaic2 RAID02086418 mmu-miR-466f miRNA MIMAT0005844 Dnaic2 mRNA 432611 Prediction 0.1828 Dnaic2 RAID02180172 mmu-miR-874-3p miRNA MIMAT0004853 Dnaic2 mRNA 432611 Prediction 0.1828 Dnaic2 RAID02420539 mmu-miR-27a-3p miRNA MIMAT0000537 Dnaic2 mRNA 432611 Prediction 0.1828 Dnaic2 RAID02423782 mmu-miR-122-5p miRNA MIMAT0000246 Dnaic2 mRNA 432611 Prediction 0.1828 Dnaic2 RAID02435351 mmu-let-7b-5p miRNA MIMAT0000522 Dnaic2 mRNA 432611 Prediction 0.1828 Dnaic2 RAID02471965 mmu-miR-770-3p miRNA MIMAT0003891 Dnaic2 mRNA 432611 Prediction 0.1828 Dnaic2 RAID02905432 mmu-let-7d-5p miRNA MIMAT0000383 Dnaic2 mRNA 432611 Prediction 0.1828 Dnaic2 RAID02964355 mmu-miR-325-3p miRNA MIMAT0004640 Dnaic2 mRNA 432611 Prediction 0.1828 Dnaic2 RAID02993111 mmu-miR-351-3p miRNA MIMAT0017042 Dnaic2 mRNA 432611 Prediction 0.1828 Dnaic2 RAID03029699 mmu-miR-145a-5p miRNA MIMAT0000157 Dnaic2 mRNA 432611 Prediction 0.1828 Dnaic2 RAID03087205 mmu-let-7f-5p miRNA MIMAT0000525 Dnaic2 mRNA 432611 Prediction 0.1828 Dnaic2 RAID03137960 mmu-miR-3547-5p miRNA MIMAT0027832 Dnaic2 mRNA 432611 Prediction 0.1828 Dnaic2 RAID03185476 mmu-miR-29a-3p miRNA MIMAT0000535 Dnaic2 mRNA 432611 Prediction 0.1828 Dnaic2 RAID03189159 mmu-miR-499-5p miRNA MIMAT0003482 Dnaic2 mRNA 432611 Prediction 0.1828 Dnaic2 RAID03209808 mmu-let-7i-5p miRNA MIMAT0000122 Dnaic2 mRNA 432611 Prediction 0.1828 Dnaic2 RAID03222784 mmu-miR-202-3p miRNA MIMAT0000235 Dnaic2 mRNA 432611 Prediction 0.1828 Dnaic2 RAID03456480 mmu-let-7a-5p miRNA MIMAT0000521 Dnaic2 mRNA 432611 Prediction 0.1828 Dnaic2 RAID03460667 mmu-miR-6404 miRNA MIMAT0025156 Dnaic2 mRNA 432611 Prediction 0.1828 Dnaic2 RAID03485665 mmu-miR-29b-3p miRNA MIMAT0000127 Dnaic2 mRNA 432611 Prediction 0.1828 Dnaic2 RAID03552235 mmu-miR-5710 miRNA MIMAT0022505 Dnaic2 mRNA 432611 Prediction 0.1828 Dnaic2 RAID03626978 mmu-miR-330-5p miRNA MIMAT0004642 Dnaic2 mRNA 432611 Prediction 0.1828 Dnaic2 RAID03661304 mmu-miR-5131 miRNA MIMAT0020642 Dnaic2 mRNA 432611 Prediction 0.1828 Dnaic2 RAID03889880 mmu-miR-6368 miRNA MIMAT0025112 Dnaic2 mRNA 432611 Prediction 0.1828 Dnaic2 RAID03894496 mmu-miR-98-5p miRNA MIMAT0000545 Dnaic2 mRNA 432611 Prediction 0.1828 Dnaic2 RAID03987541 mmu-miR-330-3p miRNA MIMAT0000569 Dnaic2 mRNA 432611 Prediction 0.1828