DNA & RNA Element - microRNA |
Mirbase Acc | miRNA Name | Gene ID | Gene Symbol | miRNA Alignment | Alignment | Gene Alignment | miRNA Start | miRNA End | Gene Start | Gene End | Genome Coordinates | Conservation | Align Score | Seed Cat | Energy | mirSVR Score |
MIMAT0004537 | mmu-miR-154* | 192658 | Rfpl4 | uuAUCCAGUUGGCACAUACUAa | || :| : ||||||||| | gcUAUAAUAUUAGUGUAUGAUg | 2 | 21 | 398 | 419 | [mm9:7:5061500-5061521:-] | 0.4587 | 152 | 7 | -12.76 | -0.6351 |
MIMAT0004574 | mmu-miR-294* | 192658 | Rfpl4 | ucuaucccggagguAAAACUCa | ||||||| | accuagcuaagaauUUUUGAGu | 2 | 9 | 54 | 75 | [mm9:7:5061844-5061865:-] | 0.4019 | 140 | 7 | -10.61 | -0.4409 |
MIMAT0000569 | mmu-miR-330* | 192658 | Rfpl4 | agagacguccgggacACGAAAcg | |||||| | aaauuuuacugugaaUGCUUUcc | 3 | 9 | 366 | 388 | [mm9:7:5061531-5061553:-] | 0.4587 | 120 | 0 | -9.89 | -0.1665 |
MIMAT0004643 | mmu-miR-331-5p | 192658 | Rfpl4 | ccUAGGGAC-CCUG-GUA-UGGAUc | :|| ||| | || ||| ||||| | caGUCGCUGAGUACUCAUAACCUAg | 2 | 21 | 35 | 59 | [mm9:7:5061860-5061884:-] | 0.3427 | 126 | 0 | -21.05 | -0.3105 |
MIMAT0004647 | mmu-miR-338-5p | 192658 | Rfpl4 | gugagUCGUGGUCCUA-UAACAa | ||:|::| || ||||| | uauaaAGUAUUAUCAUGAUUGUu | 2 | 18 | 296 | 318 | [mm9:7:5061601-5061623:-] | 0.4587 | 121 | 0 | -9.88 | -1.0573 |
MIMAT0004659 | mmu-miR-10a* | 192658 | Rfpl4 | auaaggggaucuaugCUUAAAc | |||||| | ugauuguuuucuuugGAAUUUa | 2 | 8 | 311 | 332 | [mm9:7:5061587-5061608:-] | 0.4587 | 120 | 6 | -7.07 | -0.1902 |
MIMAT0004691 | mmu-miR-382* | 192658 | Rfpl4 | uuUUUCACAACAGGCACUUACu | :|| | || |:||||||| | guGAAAU-UUUACUGUGAAUGc | 2 | 21 | 363 | 383 | [mm9:7:5061536-5061556:-] | 0.4587 | 154 | 7 | -13.57 | -0.7992 |
MIMAT0002106 | mmu-miR-465a-5p | 192658 | Rfpl4 | aguguagucacgguaaGAUUUAu | |||||| | uuguggaauaaauaaaCUAAAUu | 2 | 8 | 420 | 442 | [mm9:7:5061477-5061499:-] | 0.4587 | 120 | 6 | -7.26 | -0.1112 |
MIMAT0003186 | mmu-miR-369-3p | 192658 | Rfpl4 | uuucuaguUGGUACAUAAUAa | |: | ||||||| | auuuuaauAUAAAGUAUUAUc | 2 | 14 | 289 | 309 | [mm9:7:5061610-5061630:-] | 0.4587 | 145 | 7 | -4.90 | -1.0418 |
MIMAT0005460 | mmu-miR-1224 | 192658 | Rfpl4 | gaGGUGG--AGGGGUCAGGAGUg | ||||| | ||| ||||||| | ucCCACCCAUGCCCCGUCCUCAa | 2 | 20 | 230 | 252 | [mm9:7:5061667-5061689:-] | 0.4974 | 166 | 7 | -32.23 | -0.2805 |
MIMAT0004825 | mmu-miR-423-5p | 192658 | Rfpl4 | uuucaGAGCGAGAG-ACGGGG-AGu | ||| | | | |||||| || | uuuccCUCCCACCCAUGCCCCGUCc | 2 | 19 | 224 | 248 | [mm9:7:5061671-5061695:-] | 0.4974 | 121 | 0 | -16.25 | -0.3956 |
MIMAT0004189 | mmu-miR-693-3p | 192658 | Rfpl4 | aaUGUCGGUGUAGACUUUCGACg | || ::: :| ||||||||| | uaACCCUUGGGUAUGAAAGCUGc | 2 | 22 | 7 | 29 | [mm9:7:5061890-5061912:-] | 0.3184 | 157 | 7 | -19.68 | -0.4423 |
MIMAT0004826 | mmu-miR-146b* | 192658 | Rfpl4 | uggUCU-UGA-CUCAGGGAUCCCg | ||| ||| ||| |||||||| | ucaAGAGACUAGAGGCCCUAGGGa | 2 | 20 | 249 | 272 | [mm9:7:5061647-5061670:-] | 0.4780 | 169 | 7 | -27.66 | -0.2120 |
MIMAT0003495 | mmu-miR-705 | 192658 | Rfpl4 | acGGGUGGGGUGGAGGGUGg | :::|:::: |||||||| | auUUUAUUUUCCCUCCCACc | 2 | 19 | 217 | 236 | [mm9:7:5061683-5061702:-] | 0.4919 | 154 | 7 | -24.91 | -0.3176 |
MIMAT0004867 | mmu-miR-327 | 192658 | Rfpl4 | uagGAGUACGG----GGAGUUCa | | |||||| ||||||| | ccaCCCAUGCCCCGUCCUCAAGa | 2 | 17 | 232 | 254 | [mm9:7:5061665-5061687:-] | 0.4780 | 151 | 7 | -24.56 | -0.3883 |
MIMAT0004871 | mmu-miR-465b-5p | 192658 | Rfpl4 | gucuagucgugguaaGAUUUAu | |||||| | uguggaauaaauaaaCUAAAUu | 2 | 8 | 421 | 442 | [mm9:7:5061477-5061498:-] | 0.4587 | 120 | 6 | -4.38 | -0.1112 |
MIMAT0004873 | mmu-miR-465c-5p | 192658 | Rfpl4 | gucuagucgcgguaaGAUUUAu | |||||| | uguggaauaaauaaaCUAAAUu | 2 | 8 | 421 | 442 | [mm9:7:5061477-5061498:-] | 0.4587 | 120 | 6 | -4.38 | -0.1134 |
MIMAT0004893 | mmu-miR-574-5p | 192658 | Rfpl4 | ugugugaguguguguGUGUGAGu | :|||||| | uuuuuuaauuuuuuuUACACUCc | 2 | 9 | 192 | 214 | [mm9:7:5061705-5061727:-] | 0.4864 | 124 | 6 | -8.64 | -0.2368 |
MIMAT0004942 | mmu-miR-598 | 192658 | Rfpl4 | auUGCUACUGCUGCUACUG-CAu | |:|| :| :| ||||| || | guAUGAAAGCUGCUAUGACAGUc | 2 | 21 | 17 | 39 | [mm9:7:5061880-5061902:-] | 0.2835 | 120 | 0 | -9.72 | -0.1061 |
MIMAT0007873 | mmu-miR-1896 | 192658 | Rfpl4 | gaGGAGUGGGUGGUAG-UCUCUc | | | |||::| || ||||| | ccCAUGCCCCGUCCUCAAGAGAc | 2 | 21 | 235 | 257 | [mm9:7:5061662-5061684:-] | 0.4780 | 124 | 0 | -19.76 | -0.2919 |
MIMAT0009393 | mmu-miR-1930 | 192658 | Rfpl4 | ugcGACGUCCAUG-AUACCUCCa | :| ||| |: |||||||| | gcaUUACAGAAAUGUAUGGAGGg | 2 | 20 | 98 | 120 | [mm9:7:5061799-5061821:-] | 0.3823 | 154 | 7 | -16.89 | -0.2704 |
MIMAT0009402 | mmu-miR-1938 | 192658 | Rfpl4 | cuggcuugauguucAGGGUGGc | ||||||| | uauuuuauuuucccUCCCACCc | 2 | 9 | 216 | 237 | [mm9:7:5061682-5061703:-] | 0.4919 | 140 | 7 | -12.58 | -0.2892 |
MIMAT0009431 | mmu-miR-1958 | 192658 | Rfpl4 | ugAAUGACGAAGGUGAAAGGAu | ||||||: ::||||||| | uuUUACUGUGAAUGCUUUCCUu | 2 | 21 | 369 | 390 | [mm9:7:5061529-5061550:-] | 0.4587 | 164 | 7 | -20.18 | -0.8657 |
MIMAT0009459 | mmu-miR-1982* | 192658 | Rfpl4 | ggagggguccuGGGAGGGUu | |||||||| | uauuuuauuuuCCCUCCCAc | 2 | 10 | 216 | 235 | [mm9:7:5061684-5061703:-] | 0.4919 | 145 | 7 | -18.95 | -0.4410 |
MIMAT0000123 | mmu-miR-1 | 192658 | Rfpl4 | uaugUAUGAAGAAAUGUAAGGu | || :||:|||||| ||| | uuuaAU-UUUUUUUACACUCCa | 2 | 19 | 195 | 215 | [mm9:7:5061704-5061724:-] | 0.4864 | 136 | 0 | -14.28 | -0.1191 |
MIMAT0000126 | mmu-miR-27b | 192658 | Rfpl4 | cguCUUGAAUCGGUGACACUu | ||| || ::||||||| | uguGAAAUU--UUACUGUGAa | 2 | 19 | 362 | 380 | [mm9:7:5061539-5061557:-] | 0.4587 | 151 | 7 | -14.75 | -1.1304 |
MIMAT0000128 | mmu-miR-30a | 192658 | Rfpl4 | gaaggucagcuccUACAAAUGu | |||||||: | uucuuuggaauuuAUGUUUAUa | 2 | 10 | 319 | 340 | [mm9:7:5061579-5061600:-] | 0.4587 | 129 | 0 | -9.30 | -0.1285 |
MIMAT0000130 | mmu-miR-30b | 192658 | Rfpl4 | ucgacucacauccUACAAAUGu | |||||||: | uucuuuggaauuuAUGUUUAUa | 2 | 10 | 319 | 340 | [mm9:7:5061579-5061600:-] | 0.4587 | 129 | 0 | -8.98 | -0.1260 |
MIMAT0000140 | mmu-miR-128 | 192658 | Rfpl4 | uuucucuggccAAGUGACACu | ||:|||||| | gauugugaaauUUUACUGUGa | 2 | 11 | 359 | 379 | [mm9:7:5061540-5061560:-] | 0.4587 | 134 | 6 | -15.46 | -0.1229 |
MIMAT0000164 | mmu-miR-154 | 192658 | Rfpl4 | gcuuccgUUGUGCCUAUUGGAu | |::|| ||||||| | gucgcugAGUACUCAUAACCUa | 2 | 16 | 37 | 58 | [mm9:7:5061861-5061882:-] | 0.3427 | 151 | 7 | -14.13 | -0.3200 |
MIMAT0000165 | mmu-miR-155 | 192658 | Rfpl4 | uggggaUAGUGUUAAUCGUAAUu | | ||||| ||||||| | ccauggAGCACAA-AAGCAUUAc | 2 | 18 | 83 | 104 | [mm9:7:5061815-5061836:-] | 0.3823 | 155 | 7 | -13.24 | -0.3041 |
MIMAT0000233 | mmu-miR-200b | 192658 | Rfpl4 | agUAGUAAUGGUCCGUCAUAAu | ||: ||| :| |||||| | gcAUU-UUAAUAUAAAGUAUUa | 2 | 21 | 287 | 307 | [mm9:7:5061612-5061632:-] | 0.4587 | 122 | 6 | -10.13 | -0.1761 |
MIMAT0000239 | mmu-miR-206 | 192658 | Rfpl4 | gguguguGAAGGAAUGUAAGGu | :||::||||| ||| | uuuuaauUUUUUUUACACUCCa | 2 | 16 | 194 | 215 | [mm9:7:5061704-5061725:-] | 0.4864 | 131 | 0 | -14.04 | -0.1191 |
MIMAT0000246 | mmu-miR-122 | 192658 | Rfpl4 | guuugUGGUAACAGUGUGAGGu | |:: || |:||||||| | uuuuaAUUUUUUUUACACUCCa | 2 | 18 | 194 | 215 | [mm9:7:5061704-5061725:-] | 0.4864 | 157 | 7 | -15.33 | -1.3119 |
MIMAT0000248 | mmu-miR-30e | 192658 | Rfpl4 | gaaggucaguuccUACAAAUGu | |||||||: | uucuuuggaauuuAUGUUUAUa | 2 | 10 | 319 | 340 | [mm9:7:5061579-5061600:-] | 0.4587 | 129 | 0 | -8.54 | -0.1285 |
MIMAT0000366 | mmu-miR-290-5p | 192658 | Rfpl4 | uuUCACGGGGGU--AUCAAA-CUCa | || | |||:| ||||| ||| | cuAGAGGCCCUAGGGAGUUUAGAGg | 2 | 21 | 257 | 281 | [mm9:7:5061638-5061662:-] | 0.4587 | 123 | 0 | -20.22 | -0.5841 |
MIMAT0000369 | mmu-miR-292-5p | 192658 | Rfpl4 | guuuUCUCGGGGG----UCAAA-CUCa | |||| |||: ||||| ||| | gacuAGAGGCCCUAGGGAGUUUAGAGg | 2 | 19 | 255 | 281 | [mm9:7:5061638-5061664:-] | 0.4587 | 121 | 0 | -22.44 | -0.5841 |
MIMAT0000514 | mmu-miR-30c | 192658 | Rfpl4 | cgacucucacauccUACAAAUGu | |||||||: | uuucuuuggaauuuAUGUUUAUa | 2 | 10 | 318 | 340 | [mm9:7:5061579-5061601:-] | 0.4587 | 129 | 0 | -8.47 | -0.1260 |
MIMAT0000515 | mmu-miR-30d | 192658 | Rfpl4 | gaaggucagccccUACAAAUGu | |||||||: | uucuuuggaauuuAUGUUUAUa | 2 | 10 | 319 | 340 | [mm9:7:5061579-5061600:-] | 0.4587 | 129 | 0 | -11.18 | -0.1298 |
MIMAT0000534 | mmu-miR-26b | 192658 | Rfpl4 | uggaUAGGACUU---AAUGA-ACUu | ||: |||| ||||| ||| | auagAUUGUGAAAUUUUACUGUGAa | 2 | 18 | 356 | 380 | [mm9:7:5061539-5061563:-] | 0.4587 | 120 | 0 | -10.13 | -0.9742 |
MIMAT0000537 | mmu-miR-27a | 192658 | Rfpl4 | cgcCUUGAAUCGGUGACACUu | ||| || ::||||||| | uguGAAAUU--UUACUGUGAa | 2 | 19 | 362 | 380 | [mm9:7:5061539-5061557:-] | 0.4587 | 151 | 7 | -16.39 | -1.1304 |
MIMAT0000657 | mmu-miR-200c | 192658 | Rfpl4 | agguaguaaugggccgUCAUAAu | |||||| | uagcauuuuaauauaaAGUAUUa | 2 | 8 | 285 | 307 | [mm9:7:5061612-5061634:-] | 0.4587 | 120 | 6 | -10.00 | -0.1761 |
MIMAT0004745 | mmu-miR-384-5p | 192658 | Rfpl4 | uguAACGGAUCCUUA---ACAAAUGu | || |:| ||||| ||||||: | uguUUUCUUUGGAAUUUAUGUUUAUa | 2 | 21 | 315 | 340 | [mm9:7:5061579-5061604:-] | 0.4587 | 147 | 0 | -13.99 | -0.1311 |
MIMAT0001091 | mmu-miR-410 | 192658 | Rfpl4 | uguccggUAGACAC-AAUAUAa | ||:| || |||||| | cuuuggaAUUUAUGUUUAUAUu | 2 | 15 | 321 | 342 | [mm9:7:5061577-5061598:-] | 0.4587 | 122 | 6 | -8.52 | -0.5891 |
MIMAT0001420 | mmu-miR-433 | 192658 | Rfpl4 | uguggcuccUCG-GGUAGUACUa | ||: ::||||||| | uuaauauaaAGUAUUAUCAUGAu | 2 | 14 | 292 | 314 | [mm9:7:5061605-5061627:-] | 0.4587 | 144 | 7 | -14.14 | -1.1782 |
MIMAT0001537 | mmu-miR-429 | 192658 | Rfpl4 | ugcCGU--AAUGGUCUGUCAUAAu | ||| ||| :| | |||||| | auaGCAUUUUAAUAUAAAGUAUUa | 2 | 20 | 284 | 307 | [mm9:7:5061612-5061635:-] | 0.4587 | 130 | 6 | -11.20 | -0.1761 |
MIMAT0003182 | mmu-miR-494 | 192658 | Rfpl4 | cuccAAAGGGCACAUAC-AAAGu | ||| |:||| ||| |||| | aaauUUUACUGUGAAUGCUUUCc | 2 | 19 | 366 | 388 | [mm9:7:5061531-5061553:-] | 0.4587 | 134 | 0 | -11.53 | -1.1988 |
MIMAT0004896 | mmu-miR-590-3p | 192658 | Rfpl4 | ugAUCGAAUAUGUAUUUUAAu | || || |: ||||||| | aaUAAACUAAAU-UAAAAUUu | 2 | 20 | 430 | 449 | [mm9:7:5061470-5061489:-] | 0.5155 | 145 | 7 | -2.53 | -1.1165 |