DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000240 mmu-miR-207 72184 Klhl35 cucCCUCCUC----UCGGUCCUCUUcg ||:| || ||||||||||| gaaGGGGCAGUCUUAGCCAGGAGAAca 3 21 5 31 [mm9:7:106622410-106622436:+] 0.4987 147 0 -28.47 -0.1672 MIMAT0004572 mmu-miR-290-3p 72184 Klhl35 cccgaaUUUUGAUCCG--CCGUGAAa | | :|:||| ||||||| aggagaACAUUUGGGCAUGGCACUUg 2 19 23 48 [mm9:7:106622428-106622453:+] 0.4987 153 7 -20.27 -0.2452 MIMAT0000370 mmu-miR-292-3p 72184 Klhl35 ugugagUUUUGGACC---GCCGUGAAa || |::||| :||||||| caggagAACAUUUGGGCAUGGCACUUg 2 19 22 48 [mm9:7:106622427-106622453:+] 0.4987 153 7 -18.05 -0.2430 MIMAT0000556 mmu-miR-324-3p 72184 Klhl35 ucgucGUGGACCCCGUCAcc || |||||||| ---cuCAGAAGGGGCAGUcu 3 16 1 17 [mm9:7:106622406-106622422:+] 0.5261 131 0 -18.66 -0.1277 MIMAT0003409 mmu-miR-467a 72184 Klhl35 gcgUAUAUGUACGU-CCGUGAAu | || :: ||| ||||||| agaACAUUUGGGCAUGGCACUUg 2 20 26 48 [mm9:7:106622431-106622453:+] 0.4987 154 7 -18.84 -0.2387 MIMAT0003733 mmu-miR-665 72184 Klhl35 ucCCUGGA--GUCGGAGGACCa | ||:| | |||||||| ugGCACUUGGCUCCCUCCUGGa 2 19 40 61 [mm9:7:106622445-106622466:+] 0.4713 149 7 -22.28 -0.1954 MIMAT0004825 mmu-miR-423-5p 72184 Klhl35 uuucAGAGCGAGAGACGGGGAGu |:| ||: :| |||||| guccUUUAACUUAUUUCCCCUCu 2 20 77 99 [mm9:7:106622482-106622504:+] 0.5243 127 6 -15.02 -0.1381 MIMAT0004825 mmu-miR-423-5p 72184 Klhl35 uuucagAGCGAGAGACG-GGGAGu | || ||: || ||||| ugggcaUGGCACUUGGCUCCCUCc 2 18 34 57 [mm9:7:106622439-106622462:+] 0.4713 121 0 -16.67 -0.1444 MIMAT0003482 mmu-miR-499 72184 Klhl35 uuuGUAGUGACGUUCAGAAUu || | | ||||||| -cuCAGAAGGGGCAGUCUUAg 2 19 1 20 [mm9:7:106622406-106622425:+] 0.5261 142 7 -13.14 -0.7521

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G067877 Klhl35 Mus musculus 72184

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 Klhl35 mmu-let-7e 43 68 -UGAUAUGUUGGAGGA---UGGAGU ||| :| |||||| ||||| CACUUGGCUCCCUCCUGGAACCUCC Klhl35 mmu-miR-122a 59 82 UGUUUGU-GGUAACAGUGUGAGGU :||| |||| ||| ||| -GGAACCUCCAUGUGAACAGUCCU Klhl35 mmu-miR-134 50 78 -GGGGAG-ACCAGUUGGU----CAG-UGU- :||||| ||| |||| || ||| CUCCCUCCUGG--AACCUCCAUGUGAACAG Klhl35 mmu-miR-149 4 27 CCUCACUUCUGUGCC----UCGGUCU- ||||: :| | ||||||: ----AGAAGGGGCAGUCUUAGCCAGGA Klhl35 mmu-miR-151 1 27 GGAGU----UCC-UCGGAGUCAGAUC- |||| :|| ||:||:|| | :| -CUCAGAAGGGGCAGUCUUAGCCAGGA Klhl35 mmu-miR-199a 4 39 -CUUGUCCAUCAGA---------CUUGU-GACCC- ||| :|| ||||| ||||| :|||| AGAAGGGGCAGUCUUAGCCAGGAGAACAUUUGGGC Klhl35 mmu-miR-199b 4 39 -CUUGUCCAUCAGA---------UUUGU-GACCC- ||| :|| ||||| :|||| :|||| AGAAGGGGCAGUCUUAGCCAGGAGAACAUUUGGGC Klhl35 mmu-miR-207 7 40 CUCCC-UCCUC-UCGGUCCUCU-------UCG- :||| || |||||||||| :|| AGGGGCAGUCUUAGCCAGGAGAACAUUUGGGCA Klhl35 mmu-miR-20b 30 49 AUGGACGUGAUACUCGUGAAAC |::|| :| ||| |||||| CAUUUGGGC-AUG-GCACUUG- Klhl35 mmu-miR-291a-3p 9 49 -CCGUGUGUUUC-------------ACCU---UCGUGAAA |||| | || |||: :|||||| GGGCAGUCUUAGCCAGGAGAACAUUUGGGCAUGGCACUUG Klhl35 mmu-miR-291b-3p 26 49 CUGUUUGUUUUACCUA---CGUGAAA :|||| |||: |||||| --AGAACAUU-UGGGCAUGGCACUUG Klhl35 mmu-miR-292-3p 10 49 -UGUGAGUUUUGGA------------CCG--CCGUGAA- :|| || |:|| ||| ||||||| GGCAGUCUUAGCCAGGAGAACAUUUGGGCAUGGCACUUG Klhl35 mmu-miR-293 28 48 -UGUGAUGUUUGAGACGCCGUGA- |||:| : :| :|||||| AACAUUUGG-GCA---UGGCACUU Klhl35 mmu-miR-294 28 49 UGUGUGUUUUCCCU--UCGUGAAA |||: ||| :|||||| -AACAUUU--GGGCAUGGCACUUG Klhl35 mmu-miR-295 1 20 UCUGAGUUUUCAUCAUCGU--GAAA ||||:||| :||| ||| ---CUCAGAAGG---GGCAGUCUUA Klhl35 mmu-miR-298 58 104 -CCUU---------CUUGUCGGGA-------------GGAGACGG |||| ||||||:||| ||||| |: UGGAACCUCCAUGUGAACAGUCCUUUAACUUAUUUCCCCUCUUCUU Klhl35 mmu-miR-302 19 50 AGUGGU---UUUGU--ACCU---UCGUGAAU- :||| :|||| |||: :||||||: -AGCCAGGAGAACAUUUGGGCAUGGCACUUGG Klhl35 mmu-miR-302c 20 50 -GGUGACUU-UGU--ACCU---UCGUGAAC- ||| ||: ||| |||: :||||||| GCCAG-GAGAACAUUUGGGCAUGGCACUUGG Klhl35 mmu-miR-302c* 47 73 GUCGU-------CCAUUGG-GGUACAAUUU :|| || |||| |||||| UGGCUCCCUCCUGG-AACCUCCAUGUG--- Klhl35 mmu-miR-302d 28 49 -UGUGAGUUUGUACCUUCGUGAA- |||:|: :||| :|||||| AACAUUUGGGCAU---GGCACUUG Klhl35 mmu-miR-324-3p 20 44 -GGUCGUC--GUGGACCCCGUCACC- |||| || ||::| ||||| ||| GCCAGGAGAACAUUU-GGGCA-UGGC Klhl35 mmu-miR-328 4 26 UGCCUUCCCGUCUCUCCCGGUC- | |:|||||| ||||| -AGAAGGGGCAGUCUUAGCCAGG Klhl35 mmu-miR-346 6 46 -UCUCCGUCC--------------GUGAGCCCGU-CUGU- ||:||||| ||:|:||||| |:|| AAGGGGCAGUCUUAGCCAGGAGAACAUUUGGGCAUGGCAC Klhl35 mmu-miR-378 7 29 UGUGUCCUGGACC--UCAGUCCUC- :||:| || |||||| ---AGGGGCAGUCUUAGCCAGGAGA Klhl35 mmu-miR-467* 28 50 GUAUAUGUA----CGU-CCGUGAAUG |||| ||| |||||||: ----AACAUUUGGGCAUGGCACUUGG Klhl35 mmu-miR-484 1 28 UAGCCCUCCCCU---GACUCGGA-CU- || | ||||| || |||| || CUCAGAAGGGGCAGUCUUAGCCAGGAG Klhl35 mmu-miR-615 24 63 -UUCU------CCCU--CUG-GGUCCGAG------CCU- :||| ||| |:| |: ||||| ||| GGAGAACAUUUGGGCAUGGCACUUGGCUCCCUCCUGGAA Klhl35 mmu-miR-665 34 62 AUUCCC----UG-GAGUCG---GAGGACCA ||| :| ||::|| ||||||| --UGGGCAUGGCACUUGGCUCCCUCCUGGA Klhl35 mmu-miR-679 55 82 UGGUUCUCAGUGGAG-------UGUCAGG- || :|| ||||| ||||||| UCCUGGA---ACCUCCAUGUGAACAGUCCU Klhl35 mmu-miR-700 39 61 CCACC-UGAGCCAAGGGCGCAC- ||| |||:|| |||| | || -AUGGCACUUGGCUCCCUCCUGG Klhl35 mmu-miR-707 8 45 GCAUCCGU-----UCG--------------CCGUACUGAC :|||| ||| ||||||:| --GGGGCAGUCUUAGCCAGGAGAACAUUUGGGCAUGGCA- Klhl35 mmu-miR-709 52 69 AGGAGGACGGAGACGGAGG- ||||||| ||||| CCCUCCUGGAA---CCUCCA Klhl35 mmu-miR-742 16 53 AAAUGGG-------------UCGUACC----ACCGAAAG ||| || :|||||| ||||| CUUAGCCAGGAGAACAUUUGGGCAUGGCACUUGGCUC-- Klhl35 mmu-miR-762 48 83 -CGAGACAGGGCC--GGG---------GUCGGGG- |||| |||:|| ||: |||:||: GGCUCCCUCCUGGAACCUCCAUGUGAACAGUCCUU Klhl35 mmu-miR-764-3p 36 60 -UGUCAACGGUGAUACCGG---AGGA- :|| || |||| ||||: |||| GGCA--UGGCACU-UGGCUCCCUCCUG Klhl35 mmu-miR-764-5p 22 42 -UCCUCCUGUACACUCGUGG ||||| |||| ||:|||: CAGGAGAACAUUUGGGCAUG Klhl35 mmu-miR-93 61 85 GAUGGACGUG--CUUGUCGUGAAAC |||| ||: ||||||: |||| -AACCUCCAUGUGAACAGUCCUUUA Klhl35 mmu-miR-665 54 61 AU--------------UCC---CUG-GAGUC---GGAGGACCA :|| |:| || | |||||||| AGCCAGGAGAACAUUUGGGCAUGGCACUUGGCUCCCUCCUGGA Klhl35 mmu-let-7e 44 67 UGAUAUGUUGGAGGA---UGGAGu ||| :| |||||| ||||| ACTTGGCTCCCTCCTGGAACCTCc Klhl35 mmu-miR-134 52 82 GGGGAGACC----AG-----UUGGUCAGugu |||: |||| || :| ||||| CCCTCCTGGAACCTCCATGTGAACAGTCctt Klhl35 mmu-miR-149 5 25 CCUCACU-UCUGUGCCUCGGUCu | || |: || | : |||||| GAAGGGGCAGTCTT--AGCCAGg Klhl35 mmu-miR-199a 5 37 CUUGUCCAUCAGA---------CUUGU-GACCC ||| :|| ||||| ||||| :|||| GAAGGGGCAGTCTTAGCCAGGAGAACATTTGGG Klhl35 mmu-miR-199b 27 49 CUUGUCCAUCAGAUUUGUGACCC ||||| |:| | ::|||| || GAACATTTGGGCATGGCACTTGG Klhl35 mmu-miR-207 5 31 CUCCCUCCUC----UCGGUCCUCUUcg || ||:| || ||||||||||| GAAGGGGCAGTCTTAGCCAGGAGAAca Klhl35 mmu-miR-20b 30 49 aUGGACGUGAUACUCGUGAAac |::|| :| ||| |||||| cATTTGGGC-ATG-GCACTTgg Klhl35 mmu-miR-291a-3p 24 48 CCGUGUGUUUCACCU---UCGUGAAa || : || | |||: :|||||| GGAGAAC-ATTTGGGCATGGCACTTg Klhl35 mmu-miR-291b-3p 24 48 CUGUUUGUUUUACC-UA-CGUGAAa |: :|||| || || |||||| GGAGAACATTTGGGCATGGCACTTg Klhl35 mmu-miR-292-3p 22 47 ugugagUUUUGGACC---GCCGUGAA || |::||| :||||||| caggagAACATTTGGGCATGGCACTT Klhl35 mmu-miR-293 21 46 uGUGAUGUUUGAGA--CG--CCGUGA || | || |:| || |||||| cCAGGAGAACATTTGGGCATGGCACT Klhl35 mmu-miR-294 25 48 ugugUGUUUUCCC-U-UCGUGAAa ||| ||| | :|||||| gagaACATTTGGGCATGGCACTTg Klhl35 mmu-miR-295 13 48 UCUGA----GUUUUC------AUC---AUCGUGAAa || || ||::|| |:| |:|||||| AGTCTTAGCCAGGAGAACATTTGGGCATGGCACTTg Klhl35 mmu-miR-298 68 102 ccuuCUUGUCGGGA-------------GGAGACGg ||||||:||| ||||| | atgtGAACAGTCCTTTAACTTATTTCCCCTCTTCt Klhl35 mmu-miR-302 21 48 aGUGGUUUUGU--ACCU---UCGUGAAu || |:|||| |||: :|||||| cCAGGAGAACATTTGGGCATGGCACTTg Klhl35 mmu-miR-302c 21 48 GGUGACUUUGU--ACCU---UCGUGAAC ||| :|||| |||: :||||||| CCAGGAGAACATTTGGGCATGGCACTTG Klhl35 mmu-miR-302c* 54 75 gucGUCCAUUGGGGUACAAUUu | || | |:|||||| || ctcCTGGAACCTCCATGTGAAc Klhl35 mmu-miR-302d 29 47 UGUGAGUUUGUACCUUCGUGAA |||:|::::||| :|||||| ACATTTGGGCAT---GGCACTT Klhl35 mmu-miR-324-3p 21 42 GGUCGUCGUG-GACCCCGUCACC |||| || || :| ||||| ||| CCAGGAGAACATTTGGGCA-TGG Klhl35 mmu-miR-328 1 14 ugccuucccGUCUCUCCCGGUC |||| |||| ||| -------ctCAGA-AGGGGCAG Klhl35 mmu-miR-346 17 44 ucUCCGUCC----GUGAGCCCGU-CUGU || |||| ||:|:||||| |:|| ttAGCCAGGAGAACATTTGGGCATGGCA Klhl35 mmu-miR-378 3 27 ugugUCCUGGAC---CUCAGUCCUC |||: | | || |||||| cagaAGGGGCAGTCTTAGCCAGGAG Klhl35 mmu-miR-467* 24 49 guauaUGUA----CGU-CCGUGAAug |||| ||| ||||||| ggagaACATTTGGGCATGGCACTTgg Klhl35 mmu-miR-615 31 55 uucuCCC-U-CUG-GGUCCGAGccu ||| | |:| |: ||||| atttGGGCATGGCACTTGGCTCcct Klhl35 mmu-miR-665 38 61 aUUCCCUGGA--GUCGGAGGACCa | || ||:| | |||||||| cATGGCACTTGGCTCCCTCCTGGa Klhl35 mmu-miR-679 59 80 ugguucucaguggagUGUCAGG ||||||| ggaacctccatgtgaACAGTCC Klhl35 mmu-miR-700 36 59 CC--ACC-UGAGCCAAGGGCGCAC || ||| |||:|| |||| | || GGCATGGCACTTGGCTCCCTCCTG Klhl35 mmu-miR-707 16 45 GCAUCCGUUC----G-----CCGUACUGac | ||| ||:| | ||||||:| CTTAGCCAGGAGAACATTTGGGCATGGCac Klhl35 mmu-miR-709 41 57 agGAGGACGGAGACGGAGG | |:|| || ||||| ggCACTTG--GCTCCCTCC Klhl35 mmu-miR-712* 27 55 gUUGUGGGCCC---CC----ACUGAGCGu ||||:::||| || ||:||| | gAACATTTGGGCATGGCACTTGGCTCCCt Klhl35 mmu-miR-742 29 54 aaauggguCGUACC----ACCGAaag |||||| ||||| acatttggGCATGGCACTTGGCTccc Klhl35 mmu-miR-762 49 81 CGAGACAGGGCC-----GG------GGUCGGGg |||| |||:|| || |||:|| GCTCCCTCCTGGAACCTCCATGTGAACAGTCCt Klhl35 mmu-miR-764-3p 35 58 ugucaACGGUGAUACC---GGAGGA || |||| ||| |||||| gggcaTGGCACT-TGGCTCCCTCCT Klhl35 mmu-miR-764-5p 23 41 UCCUCCUGUACACUCGUgg ||||| |||| ||:||| AGGAGAACATTTGGGCAtg Klhl35 mmu-miR-93 60 84 gaUGGACGU--GCUUGUCGUGAAAc |||| || :||||||: |||| gaACCTCCATGTGAACAGTCCTTTa

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Klhl35 RAID00093399 mmu-miR-3113-5p miRNA MIMAT0014959 Klhl35 mRNA 72184 Prediction 0.1828 Klhl35 RAID00310135 mmu-miR-3092-5p miRNA MIMAT0014905 Klhl35 mRNA 72184 Prediction 0.1828 Klhl35 RAID00443764 mmu-miR-7058-5p miRNA MIMAT0028020 Klhl35 mRNA 72184 Prediction 0.1828 Klhl35 RAID01170871 mmu-miR-1843b-5p miRNA MIMAT0019345 Klhl35 mRNA 72184 Prediction 0.1828 Klhl35 RAID01621632 mmu-miR-7660-3p miRNA MIMAT0029827 Klhl35 mRNA 72184 Prediction 0.1828 Klhl35 RAID02641247 mmu-miR-7053-5p miRNA MIMAT0028010 Klhl35 mRNA 72184 Prediction 0.1828 Klhl35 RAID02861419 mmu-miR-499-5p miRNA MIMAT0003482 Klhl35 mRNA 72184 Prediction 0.1828 Klhl35 RAID02902771 mmu-miR-1966-5p miRNA MIMAT0009439 Klhl35 mRNA 72184 Prediction 0.1828