Nup37
DNA & RNA Element - microRNA
Mirbase AccmiRNA NameGene IDGene SymbolmiRNA AlignmentAlignmentGene AlignmentmiRNA StartmiRNA EndGene StartGene EndGenome CoordinatesConservationAlign ScoreSeed CatEnergymirSVR Score
MIMAT0000154mmu-miR-142-5p69736Nup37ucAUCACGAAAGAUGAAAUAc | | | ||| |||||:| uuUUGAUCCUUC-ACUUUGUa2201433[mm9:10:87641006-87641025:+]0.57061330-6.09-0.4230
MIMAT0000230mmu-miR-199a-3p69736Nup37auuggUUAC-ACGUCUGAUG-ACa |||| | ||||||| || aauaaAAUGAUAAAGACUACAUGa218119142[mm9:10:87641111-87641134:+]0.56021240-13.69-1.3335
MIMAT0000367mmu-miR-291a-5p69736Nup37ucucucccGGAGGUGAAAC-UAc |||:||||||| || uuuuugauCCUUCACUUUGUAUu2151335[mm9:10:87641005-87641027:+]0.57061300-17.92-1.3150
MIMAT0000367mmu-miR-291a-5p69736Nup37ucucucccGGAGGU-GAAACUAc :|| :| :|||||| --uuuuccUCUGUAUUUUUGAUc215121[mm9:10:87640993-87641013:+]0.57061296-11.69-0.1345
MIMAT0004574mmu-miR-294*69736Nup37ucuaucccGGAGGU-AAAACUca :|| :| |||||| --uuuuccUCUGUAUUUUUGAuc315121[mm9:10:87640993-87641013:+]0.57061250-9.28-0.1103
MIMAT0000375mmu-miR-297a69736Nup37uguACGUGUACGUGUGUAUGua | :|:|| || |||||| auuUUUAUAU-CAAACAUACug3206383[mm9:10:87641055-87641075:+]0.57061370-9.76-0.2512
MIMAT0000376mmu-miR-29869736Nup37cccuucuugucGGGAGGAGACGg :::|||||||: -----------UUUUCCUCUGUa213112[mm9:10:87640993-87641004:+]0.57061320-15.31-0.3641
MIMAT0004620mmu-let-7a*69736Nup37ccuuucugucaucuAACAUAuc |||||| uuugauccuucacuUUGUAUuu391536[mm9:10:87641007-87641028:+]0.57061200-2.99-0.4054
MIMAT0004621mmu-let-7b*69736Nup37cccuuccgucauccAACAUAuc |||||| uuugauccuucacuUUGUAUuu391536[mm9:10:87641007-87641028:+]0.57061200-3.00-0.4054
MIMAT0005439mmu-let-7c-2*69736Nup37ccuuucugucaucuAACAUAuc |||||| uuugauccuucacuUUGUAUuu391536[mm9:10:87641007-87641028:+]0.57061200-2.99-0.4054
MIMAT0004623mmu-let-7f*69736Nup37cccuuccguuaucuAACAUAuc |||||| uuugauccuucacuUUGUAUuu391536[mm9:10:87641007-87641028:+]0.57061200-2.92-0.4054
MIMAT0004625mmu-miR-16*69736Nup37agucgucgugucaguUAUGACc |||||| auuuuuauaucaaacAUACUGu286384[mm9:10:87641055-87641076:+]0.57061206-7.18-0.2939
MIMAT0004661mmu-miR-28*69736Nup37aggucgucGAGUGUUAGAUCac || ||||||| caaacauaCUGUAAAUCUAGaa3157394[mm9:10:87641065-87641086:+]0.57061260-9.31-0.2046
MIMAT0004666mmu-miR-33*69736Nup37cacuacgugacaccUUUGUAac |||||| cuuauuuuuauaucAAACAUac396081[mm9:10:87641052-87641073:+]0.57061200-2.47-0.1065
MIMAT0004667mmu-miR-199b69736Nup37auuggUUAC-ACGUCUGAUG-ACa |||| | ||||||| || aauaaAAUGAUAAAGACUACAUGa218119142[mm9:10:87641111-87641134:+]0.56021240-13.69-1.3335
MIMAT0003387mmu-miR-376a*69736Nup37ugaGUAUCUUCCUCUUAGAUgg |||| | | |||||| aaaCAUA-CUGUA-AAUCUAga3207493[mm9:10:87641066-87641085:+]0.57061230-6.29-0.2081
MIMAT0000745mmu-miR-380-3p69736Nup37uucuacaccuggUAUGAUGUAu | ||||||| auaaaaugauaaAGACUACAUg211120141[mm9:10:87641112-87641133:+]0.56021427-11.17-1.1929
MIMAT0004704mmu-miR-335-3p69736Nup37ccaguccUCGUUAU-UACUUUUu || | || ||||||| augauaaAG-ACUACAUGAAAAa216125146[mm9:10:87641117-87641138:+]0.54981447-6.58-1.1623
MIMAT0003170mmu-miR-54169736Nup37ucacacugguuguagUCUUAGGGAa | |||||:| aguauauauuuuggaAAAAUCCUUa2113963[mm9:10:87641031-87641055:+]0.57061260-8.60-0.2517
MIMAT0003189mmu-miR-291b-5p69736Nup37ccucucccGGAGGUGAAAC-UAg |||:||||||| || uuuuugauCCUUCACUUUGUAUu2151335[mm9:10:87641005-87641027:+]0.57061300-17.92-1.3150
MIMAT0003189mmu-miR-291b-5p69736Nup37ccucucccGGAGGU-GAAACUAg :|| :| :|||||| --uuuuccUCUGUAUUUUUGAUc215121[mm9:10:87640993-87641013:+]0.57061296-15.72-0.1345
MIMAT0003897mmu-miR-75969736Nup37caguuuuAACAA--ACGUGAGACg ||| | | ||||:|| uguauuuUUGAUCCUUCACUUUGu216932[mm9:10:87641001-87641024:+]0.57061300-9.68-0.1307
MIMAT0003462mmu-miR-68469736Nup37aacugaacuucCCUUUUga |||||| guauauauuuuGGAAAAau394058[mm9:10:87641032-87641050:+]0.57061200-4.76-0.1270
MIMAT0003480mmu-miR-297b-5p69736Nup37ugUACAAGUA-CGUGUGUAUGua || ||:|| || |||||| uuAUUUUUAUAUCAAACAUACug3216183[mm9:10:87641053-87641075:+]0.57061430-8.40-0.2490
MIMAT0003499mmu-miR-70969736Nup37aggaggacggagACGGAGg |||||| uaaaucuagaaaUGCCUCa2884102[mm9:10:87641076-87641094:+]0.57061206-13.12-0.2186
MIMAT0004238mmu-miR-743a69736Nup37agauGAGUCGAACCACAGAAAg |||||: ||||||| augcCUCAGU----UGUCUUUu21995112[mm9:10:87641087-87641104:+]0.57061457-14.74-0.9066
MIMAT0004840mmu-miR-743b-3p69736Nup37agaUAAGUCGUACUACAGAAAg || | || | ||||||| gaaAUGCCUCA-GUUGUCUUUu22092112[mm9:10:87641084-87641104:+]0.57061497-11.11-0.9287
MIMAT0004865mmu-miR-297c69736Nup37uguACAUGUACGUGUGUAUGua | ||:|| || |||||| auuUUUAUAU-CAAACAUACug3206383[mm9:10:87641055-87641075:+]0.57061410-9.42-0.2490
MIMAT0004883mmu-miR-466g69736Nup37acacacacguacacAGACAUa |||||| --------uuuuccUCUGUAu28113[mm9:10:87640993-87641005:+]0.57061206-6.74-0.2236
MIMAT0004861mmu-miR-87769736Nup37gggacgcgguAGAGGAGAUg |:||||||: ---------uUUUCCUCUGu211111[mm9:10:87640993-87641003:+]0.57061300-11.45-0.1216
MIMAT0005849mmu-miR-119169736Nup37aucccgauguaucaUUCUGAc |||||| uaaauaaaaugauaAAGACUa28117137[mm9:10:87641109-87641129:+]0.56021206-5.42-0.3042
MIMAT0009440mmu-miR-196769736Nup37cguAGA-AGAGGGGUCCUAGGAGu ||| | |:::: ||||||: uccUCUGUAUUUUU--GAUCCUUc221425[mm9:10:87640996-87641017:+]0.57061280-13.39-0.1353
MIMAT0000133mmu-miR-101a69736Nup37aagucaAUAGUGU-CAUGACAu ||||| | |||||| uuuuuaUAUCAAACAUACUGUa2166485[mm9:10:87641056-87641077:+]0.57061266-12.52-0.2842
MIMAT0000140mmu-miR-12869736Nup37uuucuCUGGCCAAGUGACACu ||:| |||||| || uuuuuGAUC-CUUCACUUUGu2171332[mm9:10:87641005-87641024:+]0.57061220-10.71-0.1294
MIMAT0000156mmu-miR-14469736Nup37ucAUGUAGUAGAUAUGACAu ||:|||| ||||||| uuUAUAUCAAACAUACUGUa2196685[mm9:10:87641058-87641077:+]0.57061627-15.51-1.2304
MIMAT0000518mmu-miR-196a69736Nup37gggUUGUUGUAC----UUUGAUGGAu ||:|| ||| |:||||| | auaAAUAAAAUGAUAAAGACUACAUg220116141[mm9:10:87641108-87641133:+]0.56021260-10.28-0.1805
MIMAT0000540mmu-miR-9369736Nup37gauggacgugcuugucGUGAAAc |||||| uguauuuuugauccuuCACUUUg28931[mm9:10:87641001-87641023:+]0.57061206-13.07-0.9806
MIMAT0004651mmu-miR-340-5p69736Nup37uuagucaGAGUAACGAAAUAUu ||:|| :|||||| aaaaaucCUUAU--UUUUAUAu2165372[mm9:10:87641045-87641064:+]0.57061326-6.73-0.1540
MIMAT0000616mmu-miR-101b69736Nup37aagucgAUAGUGU-CAUGACAu ||||| | |||||| uuuuuaUAUCAAACAUACUGUa2166485[mm9:10:87641056-87641077:+]0.57061266-12.64-0.2842
MIMAT0000656mmu-miR-139-5p69736Nup37gaccucugugcacGUGACAUcu :|||||| uuuauaucaaacaUACUGUAaa3106687[mm9:10:87641058-87641079:+]0.57061210-7.73-0.2129
MIMAT0000704mmu-miR-36169736Nup37cauggggaccucuAAGACUAUu |||||||| ccucaguugucuuUUCUGAUAa21098119[mm9:10:87641090-87641111:+]0.57061457-13.98-1.2912
MIMAT0000746mmu-miR-38169736Nup37ugucucucGAACGGGAACAUAu ||| |:|||||| uuuugaucCUUCACUUUGUAUu2151435[mm9:10:87641006-87641027:+]0.57061386-9.94-0.5042
MIMAT0000748mmu-miR-38369736Nup37ucGGUGUCAGUGG--AAGACUAga || ||||:::| ||||||| ugCCUCAGUUGUCUUUUCUGAUaa32196119[mm9:10:87641088-87641111:+]0.57061470-23.01-0.3135
MIMAT0001081mmu-miR-196b69736Nup37gggUUGUUGUCCUUUGAUGGAu ||::|:| |:||||| | uaaAAUGAUA-AAGACUACAUg220121141[mm9:10:87641113-87641133:+]0.56021250-8.80-0.1805
MIMAT0001091mmu-miR-41069736Nup37uguccgguagacacAAUAUAa |||||| aaaaauccuuauuuUUAUAUc285373[mm9:10:87641045-87641065:+]0.57061206-3.40-0.2688
MIMAT0004854mmu-miR-876-5p69736Nup37aucacUAAGUGUCUCUUUAGGu |||: ::|| |||||| uauauAUUU-UGGAAAAAUCCu2184161[mm9:10:87641033-87641053:+]0.57061276-7.23-0.3044
MIMAT0004896mmu-miR-590-3p69736Nup37ugaucGAAUAUGUAUUUUAau || ||| ||||||| cuuuuCUGAUAAAUAAAAUga317108128[mm9:10:87641100-87641120:+]0.56021440-4.85-0.3730
DNA & RNA Element - TRANSFAC
AccessionASDescriptionSpeciesEntrezPubmedBinding Info
G067398Nup37Mus musculus69736
DNA & RNA Element - RepTar
Gene NamemiRNABeginEndProfile
Nup37mmu-miR-380-3pbeg:124end:142pic:3' TTCTACACCTGGTA-TGATGTAT 5'& ||. |||||||. &5' --------GATAAAGACTACATG 3'
Nup37mmu-let-7abeg:83end:103pic:3' TTGATATGTTGGATG---ATGGAGT 5'& ||.||| |.||||| &5' --------AATCTAGAAATGCCTCA 3'
Nup37mmu-let-7bbeg:83end:103pic:3' TTGGTGTGTTGGATG---ATGGAGT 5'& ||.||| |.||||| &5' --------AATCTAGAAATGCCTCA 3'
Nup37mmu-let-7cbeg:83end:103pic:3' TTGGTATGTTGGATG---ATGGAGT 5'& ||.||| |.||||| &5' --------AATCTAGAAATGCCTCA 3'
Nup37mmu-let-7fbeg:84end:103pic:3' TTGATATGTTAGATG---ATGGAGT 5'& |||||| |.||||| &5' --------AATCTAGAAATGCCTCA 3'
Nup37mmu-let-7gbeg:77end:103pic:3' TTGACATGTTTGATG---ATGGAGT 5'& |||||| ||| |.||||| &5' -ACTGTAAAT-CTAGAAATGCCTCA 3'
Nup37mmu-miR-101abeg:67end:86pic:3' AAGTCAATAGTGTC-ATGACAT 5'& ||||| ||||||| &5' ------TATCAAACATACTGTA 3'
Nup37mmu-miR-101bbeg:67end:86pic:3' AAGTCGATAGTGTC-ATGACAT 5'& ||||| ||||||| &5' ------TATCAAACATACTGTA 3'
Nup37mmu-miR-1190beg:87end:107pic:3' CTGTCTCCCCTTGGAGTCGACT 5'& .||| .||||||.|| &5' --TAGAAAT--GCCTCAGTTG- 3'
Nup37mmu-miR-144beg:65end:86pic:3' TCATGTAGTAGATATGACAT 5'& ||.|||| |||||||| &5' --TATATCAAACATACTGTA 3'
Nup37mmu-miR-17beg:18end:38pic:3' GATGGACGTGACATTCGTGAAAC 5'& ||| |||| |.|.||| &5' ---CCTTCACTTT--GTATTTT- 3'
Nup37mmu-miR-190beg:56end:81pic:3' TGGATT----ATATAGTTTGTATAGT 5'& ||| ||||||||||||| &5' -CCTTATTTTTATATCAAACATA--- 3'
Nup37mmu-miR-1929beg:78end:95pic:3' GAGACGAGATATTTCAGGATCTT 5'& ||.|||| .|||||| &5' -------CTGTAAA--TCTAGAA 3'
Nup37mmu-miR-20abeg:18end:38pic:3' GATGGACGTGATATTCGTGAAAT 5'& ||| |||| |.|.||| &5' ---CCTTCACTTT--GTATTTT- 3'
Nup37mmu-miR-20bbeg:18end:38pic:3' GATGGACGTGATACTCGTGAAAC 5'& ||| |||| |.|.||| &5' ---CCTTCACTTT--GTATTTT- 3'
Nup37mmu-miR-383beg:2end:22pic:3' TCGGTGTCAGTGGAAGACTAGA 5'& || | || .||.||||| &5' --CCTCTGTA--TTTTTGATC- 3'
Nup37mmu-miR-450b-5pbeg:69end:88pic:3' ATAAGTCCTTGTATGACGTTTT 5'& ||| |||||||||.||| &5' ---TCA--AACATACTGTAAA- 3'
Nup37mmu-miR-452beg:0end:13pic:3' CAGAGTCAAAGGAGACGTTTGT 5'& |||||||||.| &5' -------TTTCCTCTGTA---- 3'
Nup37mmu-miR-694beg:19end:41pic:3' GAAGTCCGTTGTAAAAGTC 5'& ||||| . .|||||.|| &5' CTTCACTTTGTATTTTTAG 3'
Nup37mmu-miR-743abeg:96end:113pic:3' AGATGAGTCGAACCACAGAAAG 5'& |||||. |||||||. &5' ----CTCAGT----TGTCTTTT 3'
Nup37mmu-miR-743b-3pbeg:97end:113pic:3' AGATAAGTCGTACTACAGAAAG 5'& ||||. |||||||. &5' -----TCAGT----TGTCTTTT 3'
Nup37mmu-miR-98beg:93end:103pic:3' TTGTTATGTTGAATGATGGAGT 5'& |.||||| &5' ---------------TGCCTCA 3'
DNA & RNA Element - miRNAMap
Gene NameMature miRNATarget StartTarget EndmiRNA 3-5AlignmentTarget 5-3
Nup37mmu-let-7c76104UUGGUAUG----UUGGAUG---AUGGAGU- ||||| ||:||| |:|||||--ACAUACUGUAAAUCUAGAAAUGCCUCAG
Nup37mmu-let-7f79104-UGAUAUGUUAGAUG---AUGGAGU- |||:|| |||||| |:|||||UACUGUA-AAUCUAGAAAUGCCUCAG
Nup37mmu-let-7g79104-UGACAUGUUUGAUG---AUGGAGU- |||||| ||| |:|||||UACUGUAAAU-CUAGAAAUGCCUCAG
Nup37mmu-miR-1446787GAUCAUGUAGUAGAUAUGACAU- ||:|||| ||||||||---UUAUAUCAAACAUACUGUAA
Nup37mmu-miR-291a-5p1733UCUCUCCCGGAGGUGAAACUAC || |||:|||||||--UGAU--CCUUCACUUUGU--
Nup37mmu-miR-291b-5p1737CUCUCCCGGAGGUGAAAC-UAG- || |||:||||||| ||:-UGAU--CCUUCACUUUGUAUUU
Nup37mmu-miR-298113CCUUCUUGUCGGGAGGAGACGG : |||||||:----------UUUUCCUCUGUA
Nup37mmu-miR-36195121CAUGGGGACCUCU---AAGACUAUU- |:||:| | | |||||||||AUGCCUCAGUUGUCUUUUCUGAUAAA
Nup37mmu-miR-38396119UCGGUGUCAGUGGA--AGACUAGA ||| ||||:::|| ||||||UGCCUCAGUUGUCUUUUCUGAUA-
Nup37mmu-miR-450b7189AUAAGUCCUUGUAUGACGUUUU ||| |||||||||:|||--AUCA--AACAUACUGUAAAU
Nup37mmu-miR-1447885GAUC---------------------AUGUAGUAGAUAUGACAU ||:|||| ||||||||UAUAUUUUGGAAAAAUCCUUAUUUUUAUAUCAAACAUACUGUAA
Nup37mmu-miR-361112119C------------------AUGGGGACCUCU---AAGACUAUU |:||:| | | |||||||||CAUACUGUAAAUCUAGAAAUGCCUCAGUUGUCUUUUCUGAUAAA
Nup37mmu-let-7c74102UUGGUAUG----UUGGA---UGAUGGAGU|| ||||| ||:|| | |:|||||AAACATACTGTAAATCTAGAAATGCCTCA
Nup37mmu-let-7f80102UGAUAUGUUAGA---UGAUGGAGU|||:|| ||||| | |:|||||ACTGTA-AATCTAGAAATGCCTCA
Nup37mmu-let-7g80102UGACAUGUUUGA---UGAUGGAGU|||||| || || | |:|||||ACTGTA-AATCTAGAAATGCCTCA
Nup37mmu-miR-1446485gaucAUGUAGUAGAUAUGACAU ||:|||| ||||||||ttttTATATCAAACATACTGTA
Nup37mmu-miR-1905883uGGAUU----AUAUAGUUUGUAUagu ||| | |||||||||||||tCCTTATTTTTATATCAAACATActg
Nup37mmu-miR-291a-5p1334ucucucccGGAGGUGAAACuac |||:|||||||tttttgatCCTTCACTTTGtat
Nup37mmu-miR-291b-5p1434cucucccGGAGGUGAAACuag |||:|||||||ttttgatCCTTCACTTTGtat
Nup37mmu-miR-36195119cAUGGGGACCUC---UAAGACUAUU |:||:| | | |||||||||aTGCCTCAGTTGTCTTTTCTGATAA
Nup37mmu-miR-38396119uCGGUGUCAGUGG--AAGACUAga ||| ||||:::| |||||||tGCCTCAGTTGTCTTTTCTGATaa
Nup37mmu-miR-450b6888AUA-AGUCCUUGUAUGACGUUUu||| ||| |||||||||:|||TATATCA--AACATACTGTAAAt
DNA & RNA Element - RAID2
Gene NameRAID IDInteractor 1Category 1ID 1Interactor 2Category 2ID 2MethodsScore
Nup37RAID00031381mmu-miR-876-5pmiRNAMIMAT0004854Nup37mRNA69736Prediction0.1828
Nup37RAID00332546mmu-miR-93-5pmiRNAMIMAT0000540Nup37mRNA69736Prediction0.1828
Nup37RAID00345994mmu-miR-6974-5pmiRNAMIMAT0027850Nup37mRNA69736Prediction0.1828
Nup37RAID01045246mmu-miR-128-3pmiRNAMIMAT0000140Nup37mRNA69736Prediction0.1828
Nup37RAID01362323mmu-miR-410-3pmiRNAMIMAT0001091Nup37mRNA69736Prediction0.1828
Nup37RAID01635975mmu-miR-101a-3pmiRNAMIMAT0000133Nup37mRNA69736Prediction0.1828
Nup37RAID02003845mmu-miR-340-5pmiRNAMIMAT0004651Nup37mRNA69736Prediction0.1828
Nup37RAID02224399mmu-miR-144-3pmiRNAMIMAT0000156Nup37mRNA69736Prediction0.2381
Nup37RAID02287543mmu-miR-381-3pmiRNAMIMAT0000746Nup37mRNA69736Prediction0.1828
Nup37RAID02597161mmu-miR-101b-3pmiRNAMIMAT0000616Nup37mRNA69736Prediction0.2381
Nup37RAID02848638mmu-miR-196a-5pmiRNAMIMAT0000518Nup37mRNA69736Prediction0.1828
Nup37RAID03212351mmu-miR-383-5pmiRNAMIMAT0000748Nup37mRNA69736Prediction0.1828
Nup37RAID03277786mmu-miR-361-5pmiRNAMIMAT0000704Nup37mRNA69736Prediction0.2202
Nup37RAID03693481mmu-miR-139-5pmiRNAMIMAT0000656Nup37mRNA69736Prediction0.1828
Nup37RAID03969492mmu-miR-7225-3pmiRNAMIMAT0028419Nup37mRNA69736Prediction0.1828
Nup37RAID04022989mmu-miR-196b-5pmiRNAMIMAT0001081Nup37mRNA69736Prediction0.1828
Nup37RAID04027367mmu-miR-590-3pmiRNAMIMAT0004896Nup37mRNA69736Prediction0.1828