DNA & RNA Element - microRNA |
Mirbase Acc | miRNA Name | Gene ID | Gene Symbol | miRNA Alignment | Alignment | Gene Alignment | miRNA Start | miRNA End | Gene Start | Gene End | Genome Coordinates | Conservation | Align Score | Seed Cat | Energy | mirSVR Score |
MIMAT0004636 | mmu-miR-93* | 244144 | Usp35 | gcccuucacgaucGAGUCGUCa | |||||||| | ------------uCUCAGCAGa | 2 | 10 | 1 | 10 | [mm9:7:104467969-104467978:-] | 0.5287 | 145 | 7 | -14.57 | -0.9220 |
MIMAT0003891 | mmu-miR-770-3p | 244144 | Usp35 | ggucgaggUGCAGUCCGGGUGc | |: | |||||||| | gggaagugAUCUAAGGCCCACu | 2 | 15 | 96 | 117 | [mm9:7:104467862-104467883:-] | 0.5131 | 150 | 7 | -17.13 | -0.6665 |
MIMAT0003898 | mmu-miR-760 | 244144 | Usp35 | aggggugucuGGGUCUCGGc | ::||||||| | caggguacccUUCAGAGCCu | 2 | 11 | 146 | 165 | [mm9:7:104467814-104467833:-] | 0.4974 | 142 | 7 | -18.14 | -0.1443 |
MIMAT0003449 | mmu-miR-488* | 244144 | Usp35 | aacucucacgaUAAUAGACCc | | ||||||| | ugucucuacaaAAUAUCUGGg | 2 | 11 | 211 | 231 | [mm9:7:104467748-104467768:-] | 0.5002 | 142 | 7 | -13.63 | -0.6987 |
MIMAT0003508 | mmu-miR-501-5p | 244144 | Usp35 | aaagugggucccUGUUUCCUAa | | ||||||| | cagacaucuuuuAAAAAGGAUu | 2 | 11 | 251 | 272 | [mm9:7:104467707-104467728:-] | 0.5002 | 142 | 7 | -14.70 | -1.1288 |
MIMAT0004848 | mmu-miR-883a-5p | 244144 | Usp35 | cauugacgaugaagAGAGUCGu | ||||||| | --------------UCUCAGCa | 2 | 9 | 1 | 8 | [mm9:7:104467971-104467978:-] | 0.5287 | 140 | 7 | -12.45 | -0.8608 |
MIMAT0004865 | mmu-miR-297c | 244144 | Usp35 | uguACAUGUACGUGUGUAU-GUa | |||:::| | ||||| || | gcuUGUGUGUUGAGACAUAGCAg | 2 | 20 | 231 | 253 | [mm9:7:104467726-104467748:-] | 0.5002 | 123 | 0 | -10.29 | -0.7369 |
MIMAT0004898 | mmu-miR-654-3p | 244144 | Usp35 | uucCACUAC-CAG--UCGUCUGUAu | ||| || | | ||||||||| | uguGUGUUGAGACAUAGCAGACAUc | 2 | 20 | 234 | 258 | [mm9:7:104467721-104467745:-] | 0.5002 | 157 | 7 | -18.07 | -0.2779 |
MIMAT0007874 | mmu-miR-1904 | 244144 | Usp35 | ggagGGAGGUCUCCUCGUCUUg | :|| ||| |||||||| | ----UCU-CAGCAGAGCAGAAg | 2 | 19 | 1 | 17 | [mm9:7:104467962-104467978:-] | 0.5287 | 156 | 7 | -18.14 | -0.9908 |
MIMAT0009417 | mmu-miR-1950 | 244144 | Usp35 | acugguaUAGGAAUCUACGUCu | || : :||||||| | aguugggAUGUGGGGAUGCAGg | 2 | 16 | 16 | 37 | [mm9:7:104467942-104467963:-] | 0.5287 | 143 | 7 | -15.73 | -0.3566 |
MIMAT0014853 | mmu-miR-3072 | 244144 | Usp35 | ucUUCCGAAGGACCUCCCC-CGu | :||| | | |||||||| || | agGAGGAUCCGUGGAGGGGUGCa | 2 | 21 | 125 | 147 | [mm9:7:104467832-104467854:-] | 0.4974 | 136 | 0 | -35.78 | -0.1176 |
MIMAT0000139 | mmu-miR-127 | 244144 | Usp35 | ucgguucGAGUCUGCCUAGGCu | || ||: ||||||| | acugauaCUGAGGAGGAUCCGu | 2 | 16 | 115 | 136 | [mm9:7:104467843-104467864:-] | 0.4974 | 155 | 7 | -21.59 | -0.2304 |
MIMAT0000555 | mmu-miR-324-5p | 244144 | Usp35 | ugugguuacgggauCCCCUACGc | |||||||| | agaaguugggauguGGGGAUGCa | 2 | 10 | 13 | 35 | [mm9:7:104467944-104467966:-] | 0.5287 | 145 | 7 | -16.80 | -0.9633 |
MIMAT0000590 | mmu-miR-342-3p | 244144 | Usp35 | ugcccACGCUAAAGACAC-ACUCu | || |: || |||| |||| | auaucUG-GGCUUGUGUGUUGAGa | 2 | 19 | 223 | 245 | [mm9:7:104467734-104467756:-] | 0.5002 | 120 | 0 | -16.38 | -0.4106 |
MIMAT0000597 | mmu-miR-346 | 244144 | Usp35 | ucuccguccgugagcCCGUCUGu | ||||||| | uucaccccacagcauGGCAGACc | 2 | 9 | 176 | 198 | [mm9:7:104467781-104467803:-] | 0.4988 | 140 | 7 | -16.45 | -0.4400 |