DNA & RNA Element - AREsite Gene Name Motif CDS Area ARE Area Evidence Spg20; Kiaa0610 ATTTA 79-2094 2711-2715;3423-3427 Spg20; Kiaa0610 WWATTTAWW 108-1856 2944-2952

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004519 mmu-let-7g* 229285 Spg20 cgUUCCGUC---ACC-GGACAUGUCa |:| ||| ||| : ||||||| acAGGACAGAAAUGGAUGUGUACAGa 2 21 393 418 [mm9:3:54932908-54932933:+] 0.5245 150 7 -21.93 -0.3775 MIMAT0004523 mmu-miR-29b* 229285 Spg20 auUUGGUGGUAUACUUUGGUCg || :| :| | ||||||| caAAGUAAAGU-UUAAACCAGg 2 21 995 1015 [mm9:3:54933510-54933530:+] 0.5128 146 7 -10.82 -0.2507 MIMAT0000152 mmu-miR-140* 229285 Spg20 ggcaccaagaugggACACCAu |||||| gcuuauaauauauaUGUGGUu 2 8 253 273 [mm9:3:54939855-54939875:+] 0.5910 120 6 -12.94 -0.3267 MIMAT0000154 mmu-miR-142-5p 229285 Spg20 ucaUCACGAAAGAUGAAAUAc || || | : ||||||| aagAGGGCCUGUGACUUUAUu 2 19 774 794 [mm9:3:54933289-54933309:+] 0.5128 154 7 -8.27 -0.2640 MIMAT0004539 mmu-miR-183* 229285 Spg20 aauaccgggAAGCCAUUAAGug || |||||| aauuuuuaaUUAUAUAAUUCug 3 14 218 239 [mm9:3:54932733-54932754:+] 0.5360 121 0 -2.75 -0.1178 MIMAT0000234 mmu-miR-201 229285 Spg20 uuCUUGUUACGGAAUGACUCAu ||:||| |:||||||||| aaGAGCAA--CUUUACUGAGUc 2 21 961 980 [mm9:3:54933476-54933495:+] 0.5128 169 7 -22.83 -0.4801 MIMAT0004546 mmu-miR-202-5p 229285 Spg20 uuucuucaUAUACGUAUCCUu | :| ||||||| cuuuauuaAGGUCCAUAGGAu 2 14 788 808 [mm9:3:54933303-54933323:+] 0.5128 145 7 -9.60 -0.2267 MIMAT0000240 mmu-miR-207 229285 Spg20 cucccuCCUCUCGGU-CCUCUUCg | ||: ||| ||||||| uucacuGCAGGCCCAUGGAGAAGa 2 18 667 690 [mm9:3:54933182-54933205:+] 0.5128 156 7 -19.16 -0.5344 MIMAT0000240 mmu-miR-207 229285 Spg20 cucCCUCCUCUCGGUC-CUCUUCg ||| :|||:||| |||||| uguGGAAUGGAGUCAGUGAGAAGa 2 21 941 964 [mm9:3:54933456-54933479:+] 0.5128 140 6 -27.02 -0.3812 MIMAT0000367 mmu-miR-291a-5p 229285 Spg20 ucuCUCCCGGA-GGUGAAACUAc || ||| :||||||| accGAACUCCUGAGGCUUUGAUu 2 20 148 170 [mm9:3:54932663-54932685:+] 0.5405 142 7 -12.65 -0.3486 MIMAT0004573 mmu-miR-293* 229285 Spg20 guuuuacaGUGUGUCAAAC-UCa :|::||||||| || uucuaacaUAUGCAGUUUGUAGu 2 15 173 195 [mm9:3:54939775-54939797:+] 0.5607 122 0 -13.77 -0.5939 MIMAT0004574 mmu-miR-294* 229285 Spg20 ucuaucccgGAGGUAAAACUCa ||: ||||||| cuuguuccaCUUACUUUUGAGa 2 14 1035 1056 [mm9:3:54933550-54933571:+] 0.5128 145 7 -11.39 -0.8839 MIMAT0004575 mmu-miR-295* 229285 Spg20 cuuCACACGGGGUGUAAACUCa |||| |:::: ||||||| ucuGUGUACUUUGGAUUUGAGg 2 20 444 465 [mm9:3:54932959-54932980:+] 0.5175 163 7 -16.16 -0.1975 MIMAT0004575 mmu-miR-295* 229285 Spg20 cuUCACACGGGGUGUAAACUCa ||| | :|:: :||||||| acAGU-UAUCUUCUAUUUGAGu 2 21 362 382 [mm9:3:54932877-54932897:+] 0.5316 154 7 -14.61 -0.7035 MIMAT0004579 mmu-miR-302a* 229285 Spg20 cguUCAUGU-UGGUGCAAAUUca | ||:| |: |||||| uauAAUAUAUAUGUGGUUUAA-- 3 20 256 276 [mm9:3:54939858-54939878:+] 0.5910 126 0 -2.68 -0.1787 MIMAT0004579 mmu-miR-302a* 229285 Spg20 cguucaUGUUGGUGCAAAUUca | :| :|:|||||| aaugcaAAGAAUAUGUUUAAuu 3 17 200 221 [mm9:3:54932715-54932736:+] 0.5405 132 0 -10.56 -0.1861 MIMAT0004583 mmu-miR-130b* 229285 Spg20 ucaUCACGUU-GUCCCU-UUCUCa | || |: ||| || ||||| uggAAUGGAGUCAGUGAGAAGAGc 2 20 943 966 [mm9:3:54933458-54933481:+] 0.5128 122 0 -11.85 -0.3513 MIMAT0004627 mmu-miR-20a* 229285 Spg20 gaaAUUCACGAG-CAUUACGUca ||| ||:|| ||||||| uugUAAAUGUUCAUUAAUGCAaa 3 20 185 207 [mm9:3:54932700-54932722:+] 0.5405 146 0 -10.87 -0.1651 MIMAT0004628 mmu-miR-21* 229285 Spg20 cuGUCGGGUAGCUGAC-GACAAc ||| |:|| ||| ||||| aaCAG--CGUCUUCUGUCUGUUc 2 21 74 94 [mm9:3:54939676-54939696:+] 0.5607 121 0 -17.29 -0.8465 MIMAT0004629 mmu-miR-22* 229285 Spg20 auuucgaACGGUGACUUCUUGa ||::|:| |||||| uuggcagUGUUAUUAAAGAACa 2 16 1067 1088 [mm9:3:54933582-54933603:+] 0.5128 131 6 -14.42 -0.2181 MIMAT0004630 mmu-miR-26b* 229285 Spg20 cucgguucauuaccUCUUGUCc ||||||| cggagauucuccacAGAACAGc 2 9 58 79 [mm9:3:54939660-54939681:+] 0.5678 140 7 -13.33 -0.2103 MIMAT0004630 mmu-miR-26b* 229285 Spg20 cuCGGUUC-AUUACCUCUUGUcc || : | || | |||||| ugGCAGUGUUAUUAAAGAACAaa 3 21 1068 1090 [mm9:3:54933583-54933605:+] 0.5128 127 0 -8.05 -0.3544 MIMAT0004636 mmu-miR-93* 229285 Spg20 gcccuucACGAUCG--AGUCGUCa ||:|||: ||||||| uuuguuuUGUUAGUGGUCAGCAGu 2 16 904 927 [mm9:3:54933419-54933442:+] 0.5128 154 7 -18.75 -0.1361 MIMAT0000556 mmu-miR-324-3p 229285 Spg20 ucgUCGUGGACCCCGUCACc | :||:| ||||||| acaAAUACUU-UGGCAGUGu 2 18 1058 1076 [mm9:3:54933573-54933591:+] 0.5128 147 7 -15.86 -1.0688 MIMAT0004640 mmu-miR-325 229285 Spg20 aacuauccuccacgaGUUAUUu |||||| cuauuuuugcaguuaCAAUAAa 2 8 231 252 [mm9:3:54939833-54939854:+] 0.6121 120 6 -6.72 -0.1809 MIMAT0000595 mmu-miR-345-5p 229285 Spg20 uucgUGACCUGAUCCC-CAGUCg || | || :||| ||||| gaagACAGCACAGGGGAGUCAGa 2 19 732 754 [mm9:3:54933247-54933269:+] 0.5128 126 0 -19.25 -0.2838 MIMAT0004661 mmu-miR-28* 229285 Spg20 agguCGUCGAGUGUUAGA-UCAc ||||:|:::|:||| ||| auauGCAGUUUGUAGUCUCAGUa 2 19 180 202 [mm9:3:54939782-54939804:+] 0.5864 122 0 -18.63 -0.1686 MIMAT0000706 mmu-miR-362-5p 229285 Spg20 uaaGUGUGGAUCCAAGGUUCCUaa :::|:| | || |||||| gcaUGUAUCCA-CUUACAAGGAaa 3 22 126 148 [mm9:3:54939728-54939750:+] 0.5607 131 0 -13.38 -0.1558 MIMAT0000706 mmu-miR-362-5p 229285 Spg20 uaaguGUGGAUCCAAGGU-UCCUAa :|:: ||| |||| ||||| gacuuUAUUAAGG-UCCAUAGGAUu 2 20 786 809 [mm9:3:54933301-54933324:+] 0.5128 125 0 -17.88 -0.1045 MIMAT0000742 mmu-miR-378* 229285 Spg20 ugUGUC-CUGGACCUCAGUC-CUc || | |: ||||||||| || gaACUGUGGAAUGGAGUCAGUGAg 2 21 937 960 [mm9:3:54933452-54933475:+] 0.5128 127 0 -27.69 -0.3781 MIMAT0001093 mmu-miR-411* 229285 Spg20 ccaaucaccuggcaCAAUGUau |||||| aaacuauuuuugcaGUUACAau 3 9 228 249 [mm9:3:54939830-54939851:+] 0.6121 120 0 -6.77 -0.1384 MIMAT0001637 mmu-miR-452 229285 Spg20 cagagucaAAGGAG--ACGUUUgu ||| |: |||||| uguaaaugUUCAUUAAUGCAAAga 3 15 186 209 [mm9:3:54932701-54932724:+] 0.5405 125 0 -7.73 -0.2829 MIMAT0002106 mmu-miR-465a-5p 229285 Spg20 agUGUAGUCACGGUAAGAUU-UAu ||||| || | |||||| || uuACAUC--UGGC-UUCUAACAUa 2 22 162 182 [mm9:3:54939764-54939784:+] 0.5607 124 0 -13.47 -1.0484 MIMAT0002889 mmu-miR-532-5p 229285 Spg20 ugccaggaUGUGAGUUCCGUAc |::: ||||||| agcacaggAUGUCAAAGGCAUu 2 15 646 667 [mm9:3:54933161-54933182:+] 0.5128 142 7 -10.63 -0.2442 MIMAT0004781 mmu-miR-532-3p 229285 Spg20 acguucggaacccacACCCUCc |||||| ------ugagaauccUGGGAGu 2 8 1 16 [mm9:3:54939603-54939618:+] 0.6108 120 6 -10.27 -0.1106 MIMAT0004790 mmu-miR-503* 229285 Spg20 gguccgucAC-CUUUG-UUAUGAg || ||||| |||||| cuuacuuuUGAGAAACAAAUACUu 2 15 1044 1067 [mm9:3:54933559-54933582:+] 0.5128 125 6 -11.56 -0.4096 MIMAT0003189 mmu-miR-291b-5p 229285 Spg20 ccuCUCCCGGA-GGUGAAACUAg || ||| :||||||| accGAACUCCUGAGGCUUUGAUu 2 20 148 170 [mm9:3:54932663-54932685:+] 0.5405 142 7 -13.99 -0.3486 MIMAT0003376 mmu-miR-302c 229285 Spg20 ggUGAC-UUUGUACCUUC-GUGAa |||| :|| : ||||| |||| aaACUGUGAAAGGGGAAGUCACUc 2 21 861 884 [mm9:3:54933376-54933399:+] 0.5128 131 0 -17.92 -0.2502 MIMAT0003731 mmu-miR-671-5p 229285 Spg20 gagguCGGGGAGGU--CCCGAAGGa |::|:| || ||||||: ucaguGUUCUUACAUCUGGCUUCUa 2 19 153 177 [mm9:3:54939755-54939779:+] 0.5607 133 0 -17.24 -0.1497 MIMAT0003732 mmu-miR-668 229285 Spg20 ccaucacccggcucGGCUCACUGu | ||||||| ucuguucauuucuaCAGAGUGACu 2 11 88 111 [mm9:3:54939690-54939713:+] 0.5607 142 7 -12.33 -0.7243 MIMAT0004188 mmu-miR-802 229285 Spg20 uuCCUACUUAGAAACA-AUGACu ||| | |:|| || ||||| agGGAACAUUUUUAGUCUACUGa 2 21 126 148 [mm9:3:54932641-54932663:+] 0.5180 128 0 -15.03 -0.4368 MIMAT0003737 mmu-miR-666-5p 229285 Spg20 ccgaGAGUGUCGACACGGG-CGa ||: || |||||||| || gugaCUU-CA-CUGUGCCCUGCu 2 19 479 499 [mm9:3:54932994-54933014:+] 0.5128 122 0 -23.99 -0.1045 MIMAT0003739 mmu-miR-673-5p 229285 Spg20 gaggUUCCUGGUCUC-GACACUc |:| | ||:| |||||| ggagAGGAAAGAGGGCCUGUGAc 2 19 766 788 [mm9:3:54933281-54933303:+] 0.5128 122 6 -18.77 -0.3804 MIMAT0003898 mmu-miR-760 229285 Spg20 aggggugucuGGGUCUCGGc |:||||||| cuguguccauCUCAGAGCCa 2 11 542 561 [mm9:3:54933057-54933076:+] 0.5128 146 7 -21.43 -0.4409 MIMAT0003740 mmu-miR-674 229285 Spg20 auGUGGUGAGGGU-AGAGUCAcg ::| ::|: :| ||||||| uaUGCAGUUUGUAGUCUCAGUaa 3 21 181 203 [mm9:3:54939783-54939805:+] 0.5864 131 0 -13.03 -0.1915 MIMAT0003462 mmu-miR-684 229285 Spg20 aacUGAACUUCCCUUUUGa |||| | ||||||: uccACUUACAAGGAAAAUa 2 17 133 151 [mm9:3:54939735-54939753:+] 0.5607 140 0 -6.94 -0.1017 MIMAT0003472 mmu-miR-693-5p 229285 Spg20 cuuuugaaagccUACACCGAc |||||||| auuuucccuuaaAUGUGGCUa 2 10 208 228 [mm9:3:54939810-54939830:+] 0.6121 145 7 -13.22 -1.2926 MIMAT0003472 mmu-miR-693-5p 229285 Spg20 cuuuugaaagccUACACCGAc ||||||:| cuuauaauauauAUGUGGUUu 2 10 254 274 [mm9:3:54939856-54939876:+] 0.5910 129 0 -9.20 -0.1066 MIMAT0004189 mmu-miR-693-3p 229285 Spg20 aaUGUCGGUGUAGACUUUCGAcg :|||::||| : |||||| uuGCAGUUACAAU--AAAGCUua 3 22 237 257 [mm9:3:54939839-54939859:+] 0.6121 138 0 -16.69 -0.6122 MIMAT0003474 mmu-miR-694 229285 Spg20 gaAGUCCGUU--GUAAAAGuc |||| |: :|||||| ucUCAGUAAGUUUAUUUUCcc 3 18 195 215 [mm9:3:54939797-54939817:+] 0.5864 128 0 -7.39 -0.1765 MIMAT0003474 mmu-miR-694 229285 Spg20 gaaguccguugUAAAAGUc |||||:| gaauauguuuaAUUUUUAa 2 9 208 226 [mm9:3:54932723-54932741:+] 0.5360 124 0 -2.00 -0.1152 MIMAT0003479 mmu-miR-669c 229285 Spg20 ugUGUGUAGGUGUGUGUU-GAUa || | :||| |||| ||| uuACUGAGUCACCAACAAGCUAc 2 21 971 993 [mm9:3:54933486-54933508:+] 0.5128 120 0 -11.69 -0.5840 MIMAT0003498 mmu-miR-708* 229285 Spg20 gaucuuCGAGUGUCAGAUCAAc |||: | ||||||| ucauguGCUU-CCUUCUAGUUa 2 17 61 81 [mm9:3:54932576-54932596:+] 0.4860 146 7 -10.52 -0.5221 MIMAT0003505 mmu-miR-714 229285 Spg20 cgcugGCUGGCCGGGAGCAGc | ::| | ||||||| gguugCUGUCAGACCUCGUCc 2 17 500 520 [mm9:3:54933015-54933035:+] 0.5128 148 7 -18.84 -0.1107 MIMAT0003508 mmu-miR-501-5p 229285 Spg20 aaagUGGGUCC--CUGUUUCC-UAa :| |||| | |||||| || cgaaGCACAGGAUGUCAAAGGCAUu 2 19 643 667 [mm9:3:54933158-54933182:+] 0.5128 121 0 -14.80 -0.1408 MIMAT0003511 mmu-miR-450b-5p 229285 Spg20 auaaguccuuguaugACGUUUu |||||| guaaauguucauuaaUGCAAAg 2 8 187 208 [mm9:3:54932702-54932723:+] 0.5405 120 6 -9.64 -0.1811 MIMAT0004237 mmu-miR-742 229285 Spg20 aaAUGGGUCGUACCACCGAAAg | | :|| || ||||||| ggUCCAUAGGAUUUUGGCUUUa 2 21 797 818 [mm9:3:54933312-54933333:+] 0.5128 156 7 -15.12 -0.9326 MIMAT0004844 mmu-miR-880 229285 Spg20 agaugagucucUCCUACCUCAu :| ||||||| aguggaacuguGGAAUGGAGUc 2 12 933 954 [mm9:3:54933448-54933469:+] 0.5128 143 7 -12.61 -0.2991 MIMAT0004848 mmu-miR-883a-5p 229285 Spg20 cauUGACGAUGAAGAGAGUCGu :| |:| | ||||||: uauGCAGUUUGUAGUCUCAGUa 2 20 181 202 [mm9:3:54939783-54939804:+] 0.5864 131 0 -13.27 -0.1417 MIMAT0004849 mmu-miR-883a-3p 229285 Spg20 uaugacucucGACAACGUCAAu :| |||||||| ggcuaaacuaUUUUUGCAGUUa 2 13 224 245 [mm9:3:54939826-54939847:+] 0.6121 148 7 -11.32 -1.3247 MIMAT0004849 mmu-miR-883a-3p 229285 Spg20 uaugacucucgacaACGUCAAu ||||||| uggcuucuaacauaUGCAGUUu 2 9 169 190 [mm9:3:54939771-54939792:+] 0.5607 140 7 -8.76 -1.0680 MIMAT0004849 mmu-miR-883a-3p 229285 Spg20 uaugacUCUCGACAAC-GUCAAu ||||: | || ||||| guguacAGAGUAGCUGACAGUUg 2 17 410 432 [mm9:3:54932925-54932947:+] 0.5245 124 0 -20.18 -0.1839 MIMAT0004850 mmu-miR-883b-5p 229285 Spg20 acugACGAUGGGUA--AGAGUCAu ||| :::::| ||||||| cauaUGCAGUUUGUAGUCUCAGUa 2 19 179 202 [mm9:3:54939781-54939804:+] 0.5864 149 7 -14.30 -1.1545 MIMAT0004851 mmu-miR-883b-3p 229285 Spg20 uaugacucucuACAACGUCAAu | |||||||| ggcuaaacuauUUUUGCAGUUa 2 12 224 245 [mm9:3:54939826-54939847:+] 0.6121 147 7 -10.82 -1.3247 MIMAT0004851 mmu-miR-883b-3p 229285 Spg20 uaugacucucuacaACGUCAAu ||||||| uggcuucuaacauaUGCAGUUu 2 9 169 190 [mm9:3:54939771-54939792:+] 0.5607 140 7 -8.76 -1.0654 MIMAT0004851 mmu-miR-883b-3p 229285 Spg20 uaugacUCUCUACAAC-GUCAAu |||| | || ||||| guguacAGAGUAGCUGACAGUUg 2 17 410 432 [mm9:3:54932925-54932947:+] 0.5245 120 0 -13.91 -0.1839 MIMAT0004863 mmu-miR-220 229285 Spg20 uucacagacUGUG-ACACCAcc |:|: |||||| gcuuauaauAUAUAUGUGGUuu 3 13 253 274 [mm9:3:54939855-54939876:+] 0.5910 123 0 -8.46 -0.2580 MIMAT0004898 mmu-miR-654-3p 229285 Spg20 uuccacuaCCAGUC-GUCUGUAu || || ||||||| acagcacaGGGGAGUCAGACAUu 2 15 736 758 [mm9:3:54933251-54933273:+] 0.5128 145 7 -15.19 -0.2180 MIMAT0004940 mmu-miR-511 229285 Spg20 acUCACGUCU--CGUUUUCCGUa || |||: |: ||||||| gaAGCACAGGAUGUCAAAGGCAu 2 20 644 666 [mm9:3:54933159-54933181:+] 0.5128 150 7 -15.28 -0.2289 MIMAT0005830 mmu-miR-466l 229285 Spg20 uuAUACACA-CGUACAUAAAUAu ||||| | : | || |||| aaUAUGUUUAAUUUUUAAUUAUa 2 21 209 231 [mm9:3:54932724-54932746:+] 0.5360 123 0 -4.66 -0.1004 MIMAT0005838 mmu-miR-669j 229285 Spg20 acaaaCGUACACU-CAUAUACGu || | | | ||||||: auaaaGCUUAUAAUAUAUAUGUg 2 18 248 270 [mm9:3:54939850-54939872:+] 0.5910 128 0 -5.70 -0.2937 MIMAT0005840 mmu-miR-669i 229285 Spg20 caUACGUACA-CACAUAUACGu | || | | | ||||||: uaAAGCUUAUAAUAUAUAUGUg 2 20 249 270 [mm9:3:54939851-54939872:+] 0.5910 130 0 -6.51 -0.2937 MIMAT0005847 mmu-miR-1190 229285 Spg20 cugucuccccuuggAGUCGACu ||||||| ucagaacucuggugUCAGCUGu 2 9 883 904 [mm9:3:54933398-54933419:+] 0.5128 140 7 -16.53 -0.1931 MIMAT0005856 mmu-miR-1195 229285 Spg20 acUCGUCCGACCGGAGCUUGAGu ||: ||| | ||||||| uuAGUCUACUGAC--CGAACUCc 2 22 137 157 [mm9:3:54932652-54932672:+] 0.5405 146 7 -14.73 -0.2177 MIMAT0007872 mmu-miR-1906 229285 Spg20 ucgggacggaGUCCGA-CGACGu :||||| ||||| gguggggaggUAGGCUAGCUGCu 2 13 832 854 [mm9:3:54933347-54933369:+] 0.5128 120 0 -18.92 -0.1500 MIMAT0007878 mmu-miR-1894-3p 229285 Spg20 gagggAAGUGGGAGAGGGAAcg ||:| :|:|||||| guaagUUUA--UUUUCCCUUaa 3 18 200 219 [mm9:3:54939802-54939821:+] 0.6121 130 0 -11.58 -0.2501 MIMAT0009394 mmu-miR-1931 229285 Spg20 cgguagcguggucGGGAACGUa |||||||| uaaguucugauucCCCUUGCAc 2 10 320 341 [mm9:3:54932835-54932856:+] 0.5316 145 7 -13.39 -0.4254 MIMAT0009407 mmu-miR-1942 229285 Spg20 guUGGUC-UACUUCUGUAGACu |:||| :| ||||||| uaAUCAGUGUUCUUACAUCUGg 2 20 150 171 [mm9:3:54939752-54939773:+] 0.5607 146 7 -19.08 -0.6284 MIMAT0009423 mmu-miR-1952 229285 Spg20 guCUUCCUCCCAC-CUCu || |||||||| ||| caGACGGAGGGUGUGAGc 2 16 37 54 [mm9:3:54939639-54939656:+] 0.5750 131 0 -26.36 -0.1161 MIMAT0009424 mmu-miR-1953 229285 Spg20 gucuUCGGACUCUUGAAAGGGu ||: | |:|||||| ucucAGUAAGUUUAUUUUCCCu 2 19 195 216 [mm9:3:54939797-54939818:+] 0.5864 130 6 -17.30 -0.2066 MIMAT0009427 mmu-miR-669n 229285 Spg20 ugugUGUAGGUGUGUGUUUa ||| | :||||||| accaACAAGC-UACACAAAg 2 17 981 999 [mm9:3:54933496-54933514:+] 0.5128 146 7 -12.59 -0.5690 MIMAT0011214 mmu-miR-2138 229285 Spg20 uaaggcgguucgggcAAGGGAa |||||| cucaguaaguuuauuUUCCCUu 2 8 196 217 [mm9:3:54939798-54939819:+] 0.5864 120 6 -14.40 -0.1980 MIMAT0011216 mmu-miR-2140 229285 Spg20 uggugguucUAGACGUGGa | ||||||| cugggagucACCUGCACCa 2 11 9 27 [mm9:3:54939611-54939629:+] 0.5750 142 7 -14.77 -0.8752 MIMAT0011222 mmu-miR-2146 229285 Spg20 gugUACCUUGGGAAGAGGUg | |||: ||||||| cggACGGAG--AUUCUCCAc 2 18 54 71 [mm9:3:54939656-54939673:+] 0.5678 142 7 -20.04 -0.2595 MIMAT0011286 mmu-miR-2182 229285 Spg20 gcgccgcacccUUUACACCGca ||||||||| uauuuucccuuAAAUGUGGCua 3 12 207 228 [mm9:3:54939809-54939830:+] 0.6121 135 0 -11.40 -0.2811 MIMAT0012771 mmu-miR-432 229285 Spg20 gaCGGGUGACUAGAUGAGGU-UCu || || || | ||||| || gaGCGGACGGAGAUUCUCCACAGa 2 22 51 74 [mm9:3:54939653-54939676:+] 0.5678 121 0 -15.14 -0.1991 MIMAT0013803 mmu-miR-2861 229285 Spg20 ggcGGGCGGCGGUCCGGGg ::| |:| ||||||| cauUUCACUG-CAGGCCCa 2 17 664 681 [mm9:3:54933179-54933196:+] 0.5128 146 7 -21.09 -0.4132 MIMAT0015641 mmu-miR-3470b 229285 Spg20 ggucggaccAGAUGUCUCACu ||||||||||| cuguucauuUCUACAGAGUGa 2 13 89 109 [mm9:3:54939691-54939711:+] 0.5607 160 7 -21.39 -1.1425 MIMAT0015646 mmu-miR-3474 229285 Spg20 cuUAGGUGCA--GAGG-AGGGUCCc | ||| || |||: ||||||| agAGCCAGGUGCCUCUGUCCCAGGa 2 21 555 579 [mm9:3:54933070-54933094:+] 0.5128 158 7 -25.88 -0.1735 MIMAT0000123 mmu-miR-1 229285 Spg20 uauguaugaagaaaUGUAAGGu ||||||| cacaggggagucagACAUUCCa 2 9 740 761 [mm9:3:54933255-54933276:+] 0.5128 140 7 -14.06 -0.2091 MIMAT0000125 mmu-miR-23b 229285 Spg20 ccauuAGGGACCGUUACACUa ||||| ||||||: uauuuUCCCU-UAAAUGUGGc 2 17 207 226 [mm9:3:54939809-54939828:+] 0.6121 134 0 -15.57 -0.1604 MIMAT0000126 mmu-miR-27b 229285 Spg20 cgucuuGAAUC--GGUGACACUu :|||| ||||||| agcugcUUUAGAAAAACUGUGAa 2 16 848 870 [mm9:3:54933363-54933385:+] 0.5128 142 7 -17.63 -0.9027 MIMAT0000128 mmu-miR-30a 229285 Spg20 gaaggucagCUCCUACAAAUgu || ||||||| uaaugcaaaGAAUAUGUUUAau 3 14 199 220 [mm9:3:54932714-54932735:+] 0.5405 129 0 -7.70 -0.2101 MIMAT0000130 mmu-miR-30b 229285 Spg20 ucgacucacauccUACAAAUgu ||||||| uaaugcaaagaauAUGUUUAau 3 10 199 220 [mm9:3:54932714-54932735:+] 0.5405 125 0 -4.66 -0.2063 MIMAT0000133 mmu-miR-101a 229285 Spg20 aaGUCAAUA-GUGUCA-UGACAu || || | || ||| ||||| uuCAUUUCUACAGAGUGACUGUu 2 20 92 114 [mm9:3:54939694-54939716:+] 0.5607 126 0 -13.81 -0.2711 MIMAT0004528 mmu-miR-125a-3p 229285 Spg20 ccgAGGGUUCUUGGAGUGGACa |||:::||: ||||||| gaaUCCUGGGAG--UCACCUGc 2 20 4 23 [mm9:3:54939606-54939625:+] 0.5750 156 7 -22.43 -0.5778 MIMAT0000140 mmu-miR-128 229285 Spg20 uuUCUCUGGCCAAGUGACACu ||||:: ||||||||| agAGAGGUGACUUCACUGUGc 2 20 473 493 [mm9:3:54932988-54933008:+] 0.5151 163 7 -21.40 -0.1079 MIMAT0000142 mmu-miR-9 229285 Spg20 aguaugUCGAUCUAU-UGGUUUCu ||: | |: ||||||| ccugggAGUCACCUGCACCAAAGc 2 18 8 31 [mm9:3:54939610-54939633:+] 0.5750 144 7 -11.59 -0.9671 MIMAT0000144 mmu-miR-132 229285 Spg20 gcugguaccgaCAUCUGACAAu || ||||||| auuucuacagaGU-GACUGUUg 2 12 95 115 [mm9:3:54939697-54939717:+] 0.5607 141 7 -12.46 -0.4028 MIMAT0000148 mmu-miR-136 229285 Spg20 gguaguaguuuugUUUACCUCa :||||||| gaguggaacugugGAAUGGAGu 2 10 932 953 [mm9:3:54933447-54933468:+] 0.5128 141 7 -12.00 -0.1206 MIMAT0000153 mmu-miR-141 229285 Spg20 gguagaaaUGGUCUGUCACAAu | :| ||||||| acaaggaaAAUAAUCAGUGUUc 2 15 140 161 [mm9:3:54939742-54939763:+] 0.5607 142 7 -9.87 -1.0234 MIMAT0000153 mmu-miR-141 229285 Spg20 gguagaaAUG-GUCUGUCACAAu ||| : |:||||||| aaacaaaUACUUUGGCAGUGUUa 2 16 1056 1078 [mm9:3:54933571-54933593:+] 0.5128 150 7 -17.24 -0.9438 MIMAT0000157 mmu-miR-145 229285 Spg20 ucccuaaGGACCCUUUUGAC-CUg ::| | ||||||| || uagcugcUUUAGAAAAACUGUGAa 2 17 847 870 [mm9:3:54933362-54933385:+] 0.5128 120 0 -10.32 -0.5931 MIMAT0000159 mmu-miR-149 229285 Spg20 cccuCACUUCU-GUGCCUCGGUCu ||| | | | ||||||| gccuGUGUCCAUCUCAGAGCCAGg 2 20 540 563 [mm9:3:54933055-54933078:+] 0.5128 146 7 -17.36 -0.1571 MIMAT0000160 mmu-miR-150 229285 Spg20 gugaccauguucccaACCCUCu |||||| ------ugagaauccUGGGAGu 2 8 1 16 [mm9:3:54939603-54939618:+] 0.6108 120 6 -10.15 -0.1073 MIMAT0000160 mmu-miR-150 229285 Spg20 gugACCAUGUUCCCAAC-CCUCu |||| ||: |||| |||| uagUGGU-CAGCAGUUGUGGAGu 2 20 914 935 [mm9:3:54933429-54933450:+] 0.5128 125 0 -20.55 -0.2076 MIMAT0000165 mmu-miR-155 229285 Spg20 ugGGGAUAGUGUUAAUC--GUAAUu |||| |:| ||||| ||||| gcCCCUUUUAACAUUAGCUCAUUAg 2 22 284 308 [mm9:3:54932799-54932823:+] 0.5316 125 0 -20.04 -0.4579 MIMAT0000209 mmu-miR-129-5p 229285 Spg20 cgUUCGGGU-CUGGCGUUUUUc | |::|| | :|||||:| aaAUGUUCAUUAAUGCAAAGAa 2 20 189 210 [mm9:3:54932704-54932725:+] 0.5405 134 0 -11.11 -0.1257 MIMAT0000212 mmu-miR-183 229285 Spg20 ucacuuaaGAUGGUCACGGUAu || |:|||||||| gagucaggCU-CUAGUGCCAUc 2 15 18 38 [mm9:3:54932533-54932553:+] 0.5671 152 7 -18.93 -0.1649 MIMAT0000212 mmu-miR-183 229285 Spg20 ucACUUAAGAUGGU--CACGGUAu | |: || |::| ||||||| caUUAGCUC-AUUAGUGUGCCAUg 2 21 295 317 [mm9:3:54932810-54932832:+] 0.5316 145 7 -13.98 -0.7114 MIMAT0000212 mmu-miR-183 229285 Spg20 ucACUUAAGAU-GGUCAC-GGUAu ||| || | || ||| |||| ggUGACUUAAAGCCUGUGUCCAUc 2 21 529 552 [mm9:3:54933044-54933067:+] 0.5128 123 0 -16.22 -0.1586 MIMAT0000239 mmu-miR-206 229285 Spg20 ggugugugaaggaaUGUAAGGu ||||||| cacaggggagucagACAUUCCa 2 9 740 761 [mm9:3:54933255-54933276:+] 0.5128 140 7 -17.11 -0.2091 MIMAT0000248 mmu-miR-30e 229285 Spg20 gaAGGUCAGUUCC---UACAAAUgu |: | ||| | ||||||| caUUAAUGCAAAGAAUAUGUUUAau 3 21 196 220 [mm9:3:54932711-54932735:+] 0.5405 127 0 -5.77 -0.2101 MIMAT0000366 mmu-miR-290-5p 229285 Spg20 uuUCACGGGGGUA--UCAAACUCa || | |:: || :||||||| aaAG-GACUUGAUUGGGUUUGAGg 2 21 262 284 [mm9:3:54932777-54932799:+] 0.5316 145 7 -13.79 -0.1002 MIMAT0000373 mmu-miR-295 229285 Spg20 ucUGAGUU-UUCAUCAUCG-UGAAa | |||: :|| || ||| |||| ggAGUCAGUGAGAAG-AGCAACUUu 2 22 949 972 [mm9:3:54933464-54933487:+] 0.5128 122 0 -16.34 -0.3172 MIMAT0000513 mmu-miR-19b 229285 Spg20 agucaaaacguaccuAAACGUgu |||||| uguggcuaaacuauuUUUGCAgu 3 9 221 243 [mm9:3:54939823-54939845:+] 0.6121 120 0 -8.36 -0.2398 MIMAT0000514 mmu-miR-30c 229285 Spg20 cgacucucacauccUACAAAUgu ||||||| uuaaugcaaagaauAUGUUUAau 3 10 198 220 [mm9:3:54932713-54932735:+] 0.5405 125 0 -4.98 -0.2063 MIMAT0000515 mmu-miR-30d 229285 Spg20 gaaggucagccccUACAAAUgu ||||||| uaaugcaaagaauAUGUUUAau 3 10 199 220 [mm9:3:54932714-54932735:+] 0.5405 125 0 -6.00 -0.2121 MIMAT0000519 mmu-miR-200a 229285 Spg20 uguagcaaUGGUCUGUCACAAu | :| ||||||| acaaggaaAAUAAUCAGUGUUc 2 15 140 161 [mm9:3:54939742-54939763:+] 0.5607 142 7 -9.77 -1.0234 MIMAT0000519 mmu-miR-200a 229285 Spg20 uguagcaAUG-GUCUGUCACAAu ||| : |:||||||| aaacaaaUACUUUGGCAGUGUUa 2 16 1056 1078 [mm9:3:54933571-54933593:+] 0.5128 150 7 -17.66 -0.9438 MIMAT0000532 mmu-miR-23a 229285 Spg20 ccuuuAGGGACCGUUACACUa ||||| ||||||: uauuuUCCCU-UAAAUGUGGc 2 17 207 226 [mm9:3:54939809-54939828:+] 0.6121 134 0 -15.45 -0.1604 MIMAT0000537 mmu-miR-27a 229285 Spg20 cgccuuGAAUC--GGUGACACUu :|||| ||||||| agcugcUUUAGAAAAACUGUGAa 2 16 848 870 [mm9:3:54933363-54933385:+] 0.5128 142 7 -16.56 -0.9027 MIMAT0000540 mmu-miR-93 229285 Spg20 gaUGGACGUGCUUGUCG-UGAAAc ::| |:: ||| ||| ||||| gaGUCAGUGAGAAGAGCAACUUUa 2 22 950 973 [mm9:3:54933465-54933488:+] 0.5128 129 0 -12.21 -0.3652 MIMAT0000616 mmu-miR-101b 229285 Spg20 aaGUCGAUA-GUGUCA-UGACAu || :| | || ||| ||||| uuCAUUUCUACAGAGUGACUGUu 2 20 92 114 [mm9:3:54939694-54939716:+] 0.5607 122 0 -14.31 -0.2664 MIMAT0000651 mmu-miR-19a 229285 Spg20 agucaaaacguAUCUAAACGUgu || |||||| uguggcuaaacUAUUUUUGCAgu 3 13 221 243 [mm9:3:54939823-54939845:+] 0.6121 124 0 -8.36 -0.2398 MIMAT0000659 mmu-miR-212 229285 Spg20 accggcacUGAC-CUCUGACAAu || | | ||||||| ucauuucuACAGAGUGACUGUUg 2 15 93 115 [mm9:3:54939695-54939717:+] 0.5607 145 7 -11.52 -0.4208 MIMAT0000667 mmu-miR-33 229285 Spg20 acgUUACGUUGAUGUUACGUg ||||: | :|||||| guaAAUGU-UCAUUAAUGCAa 2 19 187 206 [mm9:3:54932702-54932721:+] 0.5405 132 6 -10.89 -0.2376 MIMAT0000671 mmu-miR-224 229285 Spg20 uugccuuggUGAUCACUGAAu :| :||||||| guccccuugGCAGGUGACUUa 2 13 517 537 [mm9:3:54933032-54933052:+] 0.5128 144 7 -13.25 -0.2116 MIMAT0000671 mmu-miR-224 229285 Spg20 uugcCUUGGUGAUCACUGAAu ||: || ||||||| gaaaGAGGGCCU-GUGACUUu 2 18 772 791 [mm9:3:54933287-54933306:+] 0.5128 143 7 -15.78 -0.4309 MIMAT0000679 mmu-miR-217 229285 Spg20 aggucagucaaggacUACGUCAu ||||||| ucuggcuucuaacauAUGCAGUu 2 9 167 189 [mm9:3:54939769-54939791:+] 0.5607 140 7 -12.39 -1.1097 MIMAT0000679 mmu-miR-217 229285 Spg20 aggucagucaaggacuACGUCAu |||||| guggcuaaacuauuuuUGCAGUu 2 8 222 244 [mm9:3:54939824-54939846:+] 0.6121 120 6 -9.96 -0.2717 MIMAT0000704 mmu-miR-361 229285 Spg20 cauGGGGACC--UCU-AAGACUAUu |::|| | ||: |||||||| uucCUUCUAGUUAGGUUUCUGAUAa 2 20 69 93 [mm9:3:54932584-54932608:+] 0.4955 153 7 -16.08 -0.9884 MIMAT0000704 mmu-miR-361 229285 Spg20 cauggggaccucUAAGACUAUu ||||||||| uuuaauuauauaAUUCUGAUAu 2 11 222 243 [mm9:3:54932737-54932758:+] 0.5316 150 7 -9.72 -1.1323 MIMAT0000739 mmu-miR-375 229285 Spg20 agugcgcucggcuugCUUGUUu |||||| ggcaguguuauuaaaGAACAAa 2 8 1069 1090 [mm9:3:54933584-54933605:+] 0.5128 120 6 -11.90 -0.4059 MIMAT0004745 mmu-miR-384-5p 229285 Spg20 ugUAACGGAUCCUUA-ACAAAUgu | || | | |||| |||||| uuAAUG-CAAAGAAUAUGUUUAau 3 22 198 220 [mm9:3:54932713-54932735:+] 0.5405 138 0 -9.69 -0.2082 MIMAT0001091 mmu-miR-410 229285 Spg20 uguccgguagacacAAUAUAa |||||| uguuuaauuuuuaaUUAUAUa 2 8 213 233 [mm9:3:54932728-54932748:+] 0.5360 120 6 -3.84 -0.2781 MIMAT0004747 mmu-miR-411 229285 Spg20 gcaUGCGAUAUGCCAGAUGAu || :| | : ||||||| ggaACAUU-UUUAGUCUACUg 2 19 128 147 [mm9:3:54932643-54932662:+] 0.5180 144 7 -13.17 -0.6289 MIMAT0001533 mmu-miR-448 229285 Spg20 uaccCUGUAGGAUGUAUACGUu |:| ||: ||||||||| aucuGGCUUCUAACAUAUGCAg 2 19 166 187 [mm9:3:54939768-54939789:+] 0.5607 166 7 -19.26 -0.7337 MIMAT0003128 mmu-miR-485 229285 Spg20 cuuaAGUAGUGCCGGUC-GGAGa | :|::| |:||| |||| cugcUGGUUGCUGUCAGACCUCg 2 19 495 517 [mm9:3:54933010-54933032:+] 0.5128 122 0 -13.79 -0.1030 MIMAT0003168 mmu-miR-543 229285 Spg20 uucuucacguggcgcUUACAAa |||||| cuacuaauuguuguaAAUGUUc 2 8 175 196 [mm9:3:54932690-54932711:+] 0.5405 120 6 -7.68 -0.1114 MIMAT0003182 mmu-miR-494 229285 Spg20 cuccaaagggcacAUACAAAgu ||||||| uuaaugcaaagaaUAUGUUUaa 3 10 198 219 [mm9:3:54932713-54932734:+] 0.5405 125 0 -4.93 -0.3443 MIMAT0003187 mmu-miR-20b 229285 Spg20 gaUGGACGUGAUACUCG-UGAAAc ::| |:: | |||| ||||| gaGUCAGUGAGAAGAGCAACUUUa 2 22 950 973 [mm9:3:54933465-54933488:+] 0.5128 121 0 -9.39 -0.3710 MIMAT0003727 mmu-miR-374 229285 Spg20 gugaaucguccaacaUAAUAUa |||||| uauguuuaauuuuuaAUUAUAu 2 8 211 232 [mm9:3:54932726-54932747:+] 0.5360 120 6 -3.19 -0.1612 MIMAT0003456 mmu-miR-495 229285 Spg20 uucuUCAC-GUGGUACAAACAAa :||| || | |||||||| cucuGGUGUCAGC-UGUUUGUUu 2 19 889 910 [mm9:3:54933404-54933425:+] 0.5128 155 7 -15.85 -0.3647 MIMAT0005850 mmu-miR-1192 229285 Spg20 uuAAACCAGA-CAAACAAACAAa | |||| | |||||||| acUCUGGUGUCAGCUGUUUGUUu 2 21 888 910 [mm9:3:54933403-54933425:+] 0.5128 151 7 -14.83 -0.3589

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G070464 Spg20 Mus musculus 229285

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Spg20 mghv-miR-M1-9 beg:209 end:226 pic:3' TTTTTCCAGGTCCGTTTACACT 5'& ||| .|||||||. &5' -------TCCCT-TAAATGTGG 3' Spg20 mghv-miR-M1-1 beg:84 end:102 pic:3' TTTCCTTCATGCCGGTAAAGAT 5'& || .| |||||||| &5' -------GTCTGTTCATTTCTA 3' Spg20 mcmv-miR-m107-1-5p beg:101 end:113 pic:3' CCACTGAGCTCTGCTCACTGGC 5'& |||||||.| &5' -------------GAGTGACTG 3' Spg20 mmu-let-7d beg:174 end:199 pic:3' TTG-ATACGTTGGATGATGGAGA 5'& ||| ||||||. |. ..||| &5' AACATATGCAGTTTGTAGTCTC- 3' Spg20 mmu-miR-1186b beg:180 end:200 pic:3' CACCACGTACGGAAATTAGGGT 5'& |||| |..| ||.||.|| &5' ----TGCA-GTTTGTAGTCTCA 3' Spg20 mmu-miR-125a-3p beg:4 end:23 pic:3' CCGAGGGTTCTTGGAGTGGACA 5'& ||| .||. ||||||| &5' ---TCCTGGGAG--TCACCTG- 3' Spg20 mmu-miR-1901 beg:33 end:57 pic:3' CCTGGGGGCC-CTCATGCTCGCC 5'& .| ||| |.||..|||||| &5' --GCAGACGGAGGGTGTGAGCGG 3' Spg20 mmu-miR-1928 beg:216 end:228 pic:3' CTCGACCGTTACATCGA 5'& |||||.||| &5' --------AATGTGGCT 3' Spg20 mmu-miR-1935 beg:69 end:91 pic:3' TCTCTAGGCGGTCGGAGACGGA 5'& ||| | || |.||||.|| &5' --AGAACAGCGT-CTTCTGTCT 3' Spg20 mmu-miR-1944 beg:57 end:73 pic:3' TTAGTCTTGAACTGTAAGTCGTGTCTC 5'& || |||| |||||| &5' -----------GAGATTCTCCACAGA- 3' Spg20 mmu-miR-1953 beg:195 end:216 pic:3' GTC-TTCGGACTCTTGAAAGGGT 5'& ||| |||..| |.|||||| &5' CAGTAAGTTT----ATTTTCCC- 3' Spg20 mmu-miR-1954 beg:228 end:244 pic:3' TTGTCCCAGAGTGAGACGTCA 5'& || .|.|||||| &5' --------CTATTTTTGCAGT 3' Spg20 mmu-miR-1971 beg:192 end:208 pic:3' AGAGTCGGGTCGGAAATG 5'& ||||||. ||..| &5' TCTCAGTA-AGTTT---- 3' Spg20 mmu-miR-2140 beg:4 end:27 pic:3' TGGTGGTTCTA----GACGTGGA 5'& |.| | .|| ||||||| &5' ATC-CTGGGAGTCACCTGCACC- 3' Spg20 mmu-miR-2146 beg:50 end:72 pic:3' GTGTA--CCTTGGGAAGAGGTG 5'& .|. |||. |||||||| &5' -GCGGACGGAGA--TTCTCCAC 3' Spg20 mmu-miR-221 beg:210 end:228 pic:3' CTTTGGGTCGTCTGTTACATCGA 5'& ||| |||||.||| &5' ----CCCTTA----AATGTGGCT 3' Spg20 mmu-miR-222 beg:210 end:228 pic:3' TGGGTCATCGGTCTACATCGA 5'& ||| ..| ||||.||| &5' -CCC-----TTAAATGTGGCT 3' Spg20 mmu-miR-23a beg:39 end:53 pic:3' CCTTTAGGGACCG-TTACACTA 5'& || ..||||| &5' ----------GGAGGGTGTGA- 3' Spg20 mmu-miR-23a beg:209 end:226 pic:3' CCTTTAGGGACCGTTACACTA 5'& ||||| ||||||. &5' -----TCCCTTA-AATGTGG- 3' Spg20 mmu-miR-23b beg:209 end:226 pic:3' CCATTAGGGACCGTTACACTA 5'& ||||| ||||||. &5' -----TCCCTTA-AATGTGG- 3' Spg20 mmu-miR-293star beg:108 end:126 pic:3' GTTTTACAGTGTGTCAAACTCA 5'& |||.. | ||||||.| &5' -----TGTTGGA-AGTTTGGG- 3' Spg20 mmu-miR-338-3p beg:98 end:118 pic:3' GTTGTTTTAGTGACTACGACCT 5'& |||.|.| || ||.|||| &5' --ACAGAGTGAC---TGTTGGA 3' Spg20 mmu-miR-3470a beg:84 end:110 pic:3' GGTCGGACC-----AGATGTTTCACT 5'& |.||| ||||||.||||| &5' ---GTCTGTTCATTTCTACAGAGTGA 3' Spg20 mmu-miR-3470b beg:84 end:110 pic:3' GGTCGGACC-----AGATGTCTCACT 5'& |.||| |||||||||||| &5' ---GTCTGTTCATTTCTACAGAGTGA 3' Spg20 mmu-miR-376bstar beg:120 end:138 pic:3' ATTGGTATCTTCCT--TATAGGTG 5'& ..|| .||||||| &5' ---------GGGGCATGTATCCAC 3' Spg20 mmu-miR-448 beg:167 end:188 pic:3' TACCCTGTAGGATGTATACGTT 5'& |.| ||. |||||||||. &5' ----GGCTTCTAACATATGCAG 3' Spg20 mmu-miR-675-5p beg:6 end:28 pic:3' TGACACC-CGGGAAAGGCGTGGT 5'& ||| || |.| |.|||||| &5' -CTG-GGAGTCAC--CTGCACCA 3' Spg20 mmu-miR-760 beg:62 end:83 pic:3' AGGGGTGTCTGGGTCTCGGC 5'& ||.||||||| ||| |.| &5' TCTCCACAGAA-CAGCGTC- 3' Spg20 mmu-miR-7a beg:67 end:87 pic:3' TGTTGTTTTAGTGATCAGAAGGT 5'& |||.|| .| ||||||. &5' ---ACAGAACAGC--GTCTTCT- 3' Spg20 mmu-miR-7b beg:67 end:87 pic:3' TGTTGTTTTAGTGTTCAGAAGGT 5'& |||.|| .| ||||||. &5' ---ACAGAACAGC--GTCTTCT- 3' Spg20 mmu-miR-875-3p beg:188 end:209 pic:3' GTATCGGAGTCATAAAAGTCC 5'& .|||.||||||| ||.| &5' -GTAGTCTCAGTAAGTTTA-- 3' Spg20 mmu-miR-883a-3p beg:234 end:246 pic:3' TATGACTCTCGACAACGTCAAT 5'& ||||||||| &5' -------------TTGCAGTTA 3' Spg20 mmu-miR-883a-5p beg:180 end:203 pic:3' CATTGACGATGAAG----AGAGTCGT 5'& ||| | ||. ||||||.| &5' -----TGC-AGTTTGTAGTCTCAGTA 3' Spg20 mmu-miR-883b-3p beg:234 end:246 pic:3' TATGACTCTCTACAACGTCAAT 5'& ||||||||| &5' -------------TTGCAGTTA 3' Spg20 mmu-miR-883b-5p beg:181 end:203 pic:3' ACTGACGATGGGTA--AGAGTCAT 5'& ||| . .| |||||||| &5' ----TGCAGTTTGTAGTCTCAGTA 3'

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Spg20 RAID00087010 mmu-miR-30b-5p miRNA MIMAT0000130 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID00123139 mmu-miR-141-3p miRNA MIMAT0000153 Spg20 mRNA 229285 Prediction 0.2202 Spg20 RAID00151605 mmu-miR-6389 miRNA MIMAT0025137 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID00152953 mmu-miR-290a-5p miRNA MIMAT0000366 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID00167256 mmu-miR-693-5p miRNA MIMAT0003472 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID00195186 mmu-miR-497a-3p miRNA MIMAT0017247 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID00399221 mmu-miR-544-3p miRNA MIMAT0004941 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID00416101 mmu-miR-30a-5p miRNA MIMAT0000128 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID00430744 mmu-miR-129-5p miRNA MIMAT0000209 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID00449946 mmu-miR-101b-3p miRNA MIMAT0000616 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID00474810 mmu-miR-448-3p miRNA MIMAT0001533 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID00503570 mmu-miR-350-5p miRNA MIMAT0017040 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID00545007 mmu-miR-128-3p miRNA MIMAT0000140 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID00557220 mmu-miR-9-5p miRNA MIMAT0000142 Spg20 mRNA 229285 Prediction 0.2381 Spg20 RAID00629704 mmu-miR-125a-3p miRNA MIMAT0004528 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID00655908 mmu-miR-217-5p miRNA MIMAT0000679 Spg20 mRNA 229285 CLIP-seq//Prediction 0.6478 Spg20 RAID00740388 mmu-miR-543-3p miRNA MIMAT0003168 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID00873533 mmu-miR-7026-5p miRNA MIMAT0027956 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID00906082 mmu-miR-150-5p miRNA MIMAT0000160 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID00946016 mmu-miR-23a-3p miRNA MIMAT0000532 Spg20 mRNA 229285 CLIP-seq//Prediction 0.6308 Spg20 RAID00975302 mmu-miR-7051-3p miRNA MIMAT0028007 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID00982102 mmu-miR-758-5p miRNA MIMAT0017235 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID00996554 mmu-miR-28a-5p miRNA MIMAT0000653 Spg20 mRNA 229285 CLIP-seq 0.5483 Spg20 RAID01004714 mmu-miR-27b-3p miRNA MIMAT0000126 Spg20 mRNA 229285 Prediction 0.2202 Spg20 RAID01062122 mmu-miR-1a-3p miRNA MIMAT0000123 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID01106109 mmu-miR-384-3p miRNA MIMAT0001076 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID01192515 mmu-miR-6981-5p miRNA MIMAT0027864 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID01226416 mmu-miR-485-5p miRNA MIMAT0003128 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID01230868 mmu-miR-8108 miRNA MIMAT0031413 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID01262678 mmu-miR-295-3p miRNA MIMAT0000373 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID01324380 mmu-miR-200a-3p miRNA MIMAT0000519 Spg20 mRNA 229285 Prediction 0.2202 Spg20 RAID01382731 mmu-miR-21a-5p miRNA MIMAT0000530 Spg20 mRNA 229285 CLIP-seq//Prediction 0.6308 Spg20 RAID01457722 mmu-miR-130c miRNA MIMAT0025132 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID01458370 mmu-miR-183-5p miRNA MIMAT0000212 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID01495045 mmu-miR-6948-5p miRNA MIMAT0027796 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID01495243 mmu-miR-452-5p miRNA MIMAT0001637 Spg20 mRNA 229285 CLIP-seq 0.5483 Spg20 RAID01496408 mmu-miR-361-5p miRNA MIMAT0000704 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID01519669 mmu-miR-7005-5p miRNA MIMAT0027914 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID01555146 mmu-miR-743b-5p miRNA MIMAT0004839 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID01626431 mmu-miR-6380 miRNA MIMAT0025126 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID01632433 mmu-miR-130a-3p miRNA MIMAT0000141 Spg20 mRNA 229285 CLIP-seq//Prediction 0.6308 Spg20 RAID01655900 mmu-miR-6984-3p miRNA MIMAT0027871 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID01704324 mmu-miR-30d-5p miRNA MIMAT0000515 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID01868942 mmu-miR-19b-3p miRNA MIMAT0000513 Spg20 mRNA 229285 CLIP-seq//Prediction 0.6559 Spg20 RAID01882018 mmu-miR-346-5p miRNA MIMAT0000597 Spg20 mRNA 229285 CLIP-seq 0.5483 Spg20 RAID01922105 mmu-miR-721 miRNA MIMAT0003515 Spg20 mRNA 229285 CLIP-seq//Prediction 0.6478 Spg20 RAID01941698 mmu-miR-5620-3p miRNA MIMAT0022368 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID01946183 mmu-miR-495-3p miRNA MIMAT0003456 Spg20 mRNA 229285 Prediction 0.2202 Spg20 RAID01948234 mmu-miR-1192 miRNA MIMAT0005850 Spg20 mRNA 229285 Prediction 0.2202 Spg20 RAID01957889 mmu-miR-23b-3p miRNA MIMAT0000125 Spg20 mRNA 229285 CLIP-seq//Prediction 0.6308 Spg20 RAID02039358 mmu-miR-6975-5p miRNA MIMAT0027852 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID02064055 mmu-miR-30e-5p miRNA MIMAT0000248 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID02073812 mmu-miR-6341 miRNA MIMAT0025084 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID02102566 mmu-miR-6344 miRNA MIMAT0025087 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID02125083 mmu-miR-20b-5p miRNA MIMAT0003187 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID02209186 mmu-miR-3094-5p miRNA MIMAT0014909 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID02236983 mmu-miR-7225-3p miRNA MIMAT0028419 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID02241674 mmu-miR-1197-5p miRNA MIMAT0017331 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID02246368 mmu-miR-677-3p miRNA MIMAT0017246 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID02251673 mmu-miR-410-3p miRNA MIMAT0001091 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID02443250 mmu-miR-155-5p miRNA MIMAT0000165 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID02485130 mmu-miR-27a-3p miRNA MIMAT0000537 Spg20 mRNA 229285 Prediction 0.2202 Spg20 RAID02511860 mmu-miR-206-3p miRNA MIMAT0000239 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID02546600 mmu-miR-212-3p miRNA MIMAT0000659 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID02580156 mmu-miR-7007-5p miRNA MIMAT0027918 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID02640615 mmu-miR-468-3p miRNA MIMAT0002109 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID02669401 mmu-miR-375-3p miRNA MIMAT0000739 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID02669527 mmu-miR-19a-3p miRNA MIMAT0000651 Spg20 mRNA 229285 CLIP-seq//Prediction 0.6478 Spg20 RAID02795422 mmu-miR-5624-5p miRNA MIMAT0022377 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID02988558 mmu-miR-33-5p miRNA MIMAT0000667 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID03035194 mmu-miR-149-5p miRNA MIMAT0000159 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID03055631 mmu-miR-132-3p miRNA MIMAT0000144 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID03059722 mmu-miR-665-3p miRNA MIMAT0003733 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID03121708 mmu-miR-467b-5p miRNA MIMAT0005448 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID03192556 mmu-miR-883b-3p miRNA MIMAT0004851 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID03285282 mmu-miR-411-5p miRNA MIMAT0004747 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID03313782 mmu-miR-384-5p miRNA MIMAT0004745 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID03336706 mmu-miR-494-3p miRNA MIMAT0003182 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID03448193 mmu-miR-6917-3p miRNA MIMAT0027735 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID03484066 mmu-miR-224-5p miRNA MIMAT0000671 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID03510475 mmu-miR-301b-3p miRNA MIMAT0004186 Spg20 mRNA 229285 CLIP-seq//Prediction 0.6308 Spg20 RAID03519325 mmu-miR-883a-3p miRNA MIMAT0004849 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID03558007 mmu-miR-136-5p miRNA MIMAT0000148 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID03568933 mmu-miR-145a-5p miRNA MIMAT0000157 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID03594971 mmu-miR-301a-3p miRNA MIMAT0000379 Spg20 mRNA 229285 CLIP-seq//Prediction 0.6308 Spg20 RAID03648985 mmu-miR-664-3p miRNA MIMAT0012774 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID03649105 mmu-miR-291b-3p miRNA MIMAT0003190 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID03694549 mmu-miR-130b-3p miRNA MIMAT0000387 Spg20 mRNA 229285 CLIP-seq//Prediction 0.6308 Spg20 RAID03718742 mmu-miR-7061-5p miRNA MIMAT0028026 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID03752401 mmu-miR-93-5p miRNA MIMAT0000540 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID03755734 mmu-miR-101a-3p miRNA MIMAT0000133 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID03839258 mmu-miR-30c-5p miRNA MIMAT0000514 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID03850593 mmu-miR-590-3p miRNA MIMAT0004896 Spg20 mRNA 229285 Prediction 0.1828 Spg20 RAID03927688 mmu-miR-374b-5p miRNA MIMAT0003727 Spg20 mRNA 229285 Prediction 0.1828