DNA & RNA Element - AREsite Gene Name Motif CDS Area ARE Area Evidence Dennd3; Kiaa0870 ATTTA 187-4011 5218-5222 Dennd3; Kiaa0870 WWATTTAWW 187-4011 5216-5224

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004527 mmu-miR-124* 105841 Dennd3 uaguuCCAGGCGACACUUGUGc || :| || ||||||| gguguGGCUCCCU-UGAACACa 2 18 1038 1058 [mm9:15:73402422-73402442:+] 0.4941 151 7 -16.07 -0.1159 MIMAT0004529 mmu-miR-125b* 105841 Dennd3 uccaggguucuUGGACUGAACa |: ||||||| agcugaaucacAUGUGACUUGu 2 12 229 250 [mm9:15:73401613-73401634:+] 0.5882 143 7 -13.51 -0.1736 MIMAT0004540 mmu-miR-186* 105841 Dennd3 ggGUUUUUUAA-GUGGAA-UCCCg ||:: :||| | |||| |||| ggCAGGUGAUUCCUCCUUCAGGGa 2 21 444 467 [mm9:15:73401828-73401851:+] 0.5038 127 0 -19.98 -0.2627 MIMAT0004542 mmu-miR-191* 105841 Dennd3 cccuugcuUUAGGUUCACGUCg :| | ||||||| gcucccuuGAACACAGUGCAGa 2 15 1044 1065 [mm9:15:73402428-73402449:+] 0.4941 142 7 -13.97 -0.2421 MIMAT0000367 mmu-miR-291a-5p 105841 Dennd3 ucUCUCCCGGAGGUGAA-ACUAc ||: | :: | |||| |||| ccAGGUGUUUACAACUUGUGAUa 2 21 1230 1252 [mm9:15:73402614-73402636:+] 0.5128 120 0 -11.80 -0.8334 MIMAT0004624 mmu-miR-15a* 105841 Dennd3 acUCCGUCGUGUCAUACCGGAc | |||| | : ||||||| acACGCAG-AGGAAAUGGCCUg 2 21 798 818 [mm9:15:73402182-73402202:+] 0.5011 150 7 -24.02 -0.1319 MIMAT0004627 mmu-miR-20a* 105841 Dennd3 gaaAUUCACGAGCAUUAC-GUCa ||||| |: ||||| ||| uucUAAGUUAUU-UAAUGCCAGu 2 20 1198 1219 [mm9:15:73402582-73402603:+] 0.5128 125 0 -10.38 -0.4873 MIMAT0004629 mmu-miR-22* 105841 Dennd3 auUUCGAACGGUGACUUCU-UGa ||| || :| |||||| || uaAAGGUU--UAAUGAAGACACc 2 21 558 578 [mm9:15:73401942-73401962:+] 0.5047 121 0 -10.99 -0.2138 MIMAT0004668 mmu-miR-138* 105841 Dennd3 ggGACCACAACACU-UCA-UCGGc || ||| ||| | ||| |||| ggCUAGUG-UGUCACAGUCAGCCa 2 21 326 348 [mm9:15:73401710-73401732:+] 0.4474 125 0 -14.11 -0.1677 MIMAT0004691 mmu-miR-382* 105841 Dennd3 uuuuucacaaCAGGCACUUACu | ::||||||| cugcacggagGCUUGUGAAUGu 2 13 711 732 [mm9:15:73402095-73402116:+] 0.5086 144 7 -13.79 -0.2326 MIMAT0003129 mmu-miR-485* 105841 Dennd3 cucUCCUCUC-GGCACAUACUGa | | || || |||||||| uuaAUGCCAGUCCAUGUAUGACc 2 20 1209 1231 [mm9:15:73402593-73402615:+] 0.5128 154 7 -13.83 -0.4601 MIMAT0003189 mmu-miR-291b-5p 105841 Dennd3 ccUCUCCCGGAGGUGAA-ACUAg ||: | :: | |||| |||| ccAGGUGUUUACAACUUGUGAUa 2 21 1230 1252 [mm9:15:73402614-73402636:+] 0.5128 120 0 -12.80 -0.8334 MIMAT0003732 mmu-miR-668 105841 Dennd3 ccaucaccCG-GCUCGGCUCACUGu || | || :||||||| ucucacaaGCACAAG-UGAGUGACu 2 17 602 625 [mm9:15:73401986-73402009:+] 0.4972 145 7 -15.37 -0.1768 MIMAT0003734 mmu-miR-667 105841 Dennd3 gaacccgacccaccgUCCACAGu ||||||| ucuguauucccuaagAGGUGUCc 2 9 1095 1117 [mm9:15:73402479-73402501:+] 0.4982 140 7 -11.08 -0.1444 MIMAT0003736 mmu-miR-670 105841 Dennd3 aagugguguauGUGAGUCCCUa | :||||||| aggugauuccuCCUUCAGGGAa 2 12 447 468 [mm9:15:73401831-73401852:+] 0.5038 143 7 -14.76 -0.2567 MIMAT0003898 mmu-miR-760 105841 Dennd3 aggGGUGUCUGGGUCUCGGc ||||||| ||||||| cagCCACAGAAACAGAGCCu 2 18 343 362 [mm9:15:73401727-73401746:+] 0.4814 169 7 -28.10 -0.3834 MIMAT0003898 mmu-miR-760 105841 Dennd3 agggGUGUCU--GGGUCUCGGc || ||: |:||||||| agugCAGAGGAUCUCAGAGCCa 2 17 1058 1079 [mm9:15:73402442-73402463:+] 0.4982 151 7 -21.42 -0.5635 MIMAT0003740 mmu-miR-674 105841 Dennd3 auGUGG---UGAGGGUAGAGUC-ACg |||| :|| ||| ||||| || agCACCUGAGCUGCCAACUCAGCUGa 2 21 209 234 [mm9:15:73401593-73401618:+] 0.5882 127 0 -23.71 -0.3600 MIMAT0003455 mmu-miR-679 105841 Dennd3 uggUUCUCA--GUGGAGUGUCAGg |||: | ::: |||||||| gcaAAGGCUAGUGUGUCACAGUCa 2 20 321 344 [mm9:15:73401705-73401728:+] 0.4474 150 7 -16.66 -0.3268 MIMAT0003461 mmu-miR-683 105841 Dennd3 cucCUGUGUC-GA--AUGU-CGUCc ||||| | || |||| |||| gaaGACACCGACUACUACAGGCAGg 2 19 570 594 [mm9:15:73401954-73401978:+] 0.5009 124 0 -20.06 -0.4412 MIMAT0003493 mmu-miR-703 105841 Dennd3 aaGAAAGGAAGACUUCCAAAa ||| | | | ||||||| guCUUAGCAU-UAAAGGUUUa 2 20 548 567 [mm9:15:73401932-73401951:+] 0.5042 149 7 -8.67 -0.9612 MIMAT0003494 mmu-miR-704 105841 Dennd3 gaUCCUCGUCUC---GUGU-ACAGa | |:||| || |||| |||| ccAAGGGCACAGGUUCACACUGUCu 2 20 1149 1173 [mm9:15:73402533-73402557:+] 0.5055 122 0 -20.22 -0.5005 MIMAT0003506 mmu-miR-715 105841 Dennd3 gugcgcccccACACGUGCCUc | |||||||| uacauagcuaUCUGCACGGAg 2 12 700 720 [mm9:15:73402084-73402104:+] 0.5086 147 7 -20.26 -0.2184 MIMAT0004846 mmu-miR-881 105841 Dennd3 agauaagucuuuucUGUGUCAa ||||||| uguggcucccuugaACACAGUg 2 9 1040 1061 [mm9:15:73402424-73402445:+] 0.4941 140 7 -8.82 -0.1270 MIMAT0004883 mmu-miR-466g 105841 Dennd3 acacACACGUA-CACAGACAUa | | | | | ||||||| caccUCUCCCUAGAGUCUGUAu 2 18 1080 1101 [mm9:15:73402464-73402485:+] 0.4982 144 7 -10.95 -0.2874 MIMAT0005847 mmu-miR-1190 105841 Dennd3 cuGUCUC-CCCUUGGAGUCGACu | ||| | | |||||||| acCUGAGCUGCCAACUCAGCUGa 2 21 212 234 [mm9:15:73401596-73401618:+] 0.5882 151 7 -20.13 -0.3246 MIMAT0005848 mmu-miR-466j 105841 Dennd3 aauGUGUGUACGUGUAC-GUGUGu :::: |||::: || ||||| gcuUGUGAAUGUGUUUGCCACACu 2 21 721 744 [mm9:15:73402105-73402128:+] 0.5086 120 0 -11.46 -0.1688 MIMAT0005853 mmu-miR-669e 105841 Dennd3 uacUUGUACGUGU---GUGUUC-UGu |: | ||||| |||||| || ggcAGGAAGCACAUCUCACAAGCACa 2 20 589 614 [mm9:15:73401973-73401998:+] 0.4972 122 0 -17.85 -0.3519 MIMAT0007876 mmu-miR-1907 105841 Dennd3 uggAGGUCUAGGAGAC-GACGAg |||| :| | ||| ||||| gggUCCAUGU-CACUGACUGCUg 2 20 1006 1027 [mm9:15:73402390-73402411:+] 0.4900 125 0 -18.46 -0.1442 MIMAT0007878 mmu-miR-1894-3p 105841 Dennd3 gagggaagugggaGAGGGAACg |||||||| acuugagguguggCUCCCUUGa 2 10 1032 1053 [mm9:15:73402416-73402437:+] 0.4941 145 7 -17.66 -0.1267 MIMAT0009390 mmu-miR-1927 105841 Dennd3 agucaggGAUUGUAGGUCUCCAg | |: :||||||||| agaucaaCCAGGGUCCAGAGGUa 2 17 949 971 [mm9:15:73402333-73402355:+] 0.4939 156 7 -24.79 -0.1498 MIMAT0009390 mmu-miR-1927 105841 Dennd3 agUCAGGGAUUGUAGGUCUC-CAg | |:|||:|: ||||||| || uaACUUCCUGAU-UCCAGAGAGUc 2 22 376 398 [mm9:15:73401760-73401782:+] 0.5096 135 0 -25.97 -0.2451 MIMAT0009392 mmu-miR-1929 105841 Dennd3 gagacgagauauuucaGGAUCUu |||||| aaguuaccucauauuaCCUAGAa 2 8 160 182 [mm9:15:73401544-73401566:+] 0.5461 120 6 -13.77 -0.1143 MIMAT0009408 mmu-miR-1943 105841 Dennd3 agguccACGGGUCUAGGAGG-GAa |||: | | ||||| || gcuuacUGCUGAUAACCUCCACUg 2 18 134 157 [mm9:15:73401518-73401541:+] 0.5040 121 0 -15.17 -0.5944 MIMAT0009409 mmu-miR-1944 105841 Dennd3 uuaGUCUUGAACUGUAAGUC-GUGUCUc :|| :: | ||| |||| |||||| ggcUAGUGUGUCACAGUCAGCCACAGAa 2 25 326 353 [mm9:15:73401710-73401737:+] 0.4474 140 6 -17.22 -0.3051 MIMAT0009422 mmu-miR-1951 105841 Dennd3 auCGGUGUGGUCAGAGGUGAUg ||| : | :||:||||||| gaGCCUUUCGGGUUUCCACUAa 2 21 357 378 [mm9:15:73401741-73401762:+] 0.5154 164 7 -25.83 -0.7631 MIMAT0009439 mmu-miR-1966 105841 Dennd3 cugaGAGAGGACUC--GGUCGAGGGAa ||| |:|||| ::||||||| cuggCUCACUUGAGGUGUGGCUCCCUu 2 22 1025 1051 [mm9:15:73402409-73402435:+] 0.4941 164 7 -29.24 -0.1266 MIMAT0015642 mmu-miR-3471 105841 Dennd3 uuacggaAUGUCAACCUAGAGu |:||| ||||||| aacacagUGCAG-AGGAUCUCa 2 16 1053 1073 [mm9:15:73402437-73402457:+] 0.4982 149 7 -21.17 -0.3153 MIMAT0000126 mmu-miR-27b 105841 Dennd3 cgucUUGAAUCGGUG-ACACUu |:|| | :||| ||||| acucAGCUGAAUCACAUGUGAc 2 18 225 246 [mm9:15:73401609-73401630:+] 0.5882 125 0 -14.41 -0.2587 MIMAT0000127 mmu-miR-29b 105841 Dennd3 uugugACUAAAGUUUACC-ACGAu || ||:: |||| |||| caaggUGUGUUUGUAUGGAUGCUg 2 19 773 796 [mm9:15:73402157-73402180:+] 0.5011 122 0 -12.54 -0.2505 MIMAT0000128 mmu-miR-30a 105841 Dennd3 gaAGGU-CA-GCU--CCUACAAAUGu |||| || :|| |:||||||| agUCCAUGUAUGACCAGGUGUUUACa 2 21 1217 1242 [mm9:15:73402601-73402626:+] 0.5128 153 7 -20.17 -0.3954 MIMAT0000128 mmu-miR-30a 105841 Dennd3 gaAGGUCAGCUCCUACAAAUGu ||: || | ||||||| ccUCUCCUCUUCG-UGUUUACu 2 21 266 286 [mm9:15:73401650-73401670:+] 0.4369 142 7 -12.10 -0.1017 MIMAT0000130 mmu-miR-30b 105841 Dennd3 ucgacucacaucCUACAAAUGu |:||||||| cauguaugaccaGGUGUUUACa 2 11 1221 1242 [mm9:15:73402605-73402626:+] 0.5128 146 7 -14.17 -0.3984 MIMAT0000130 mmu-miR-30b 105841 Dennd3 ucgacucacauccUACAAAUGu :||||||| gccucuccucuucGUGUUUACu 2 10 265 286 [mm9:15:73401649-73401670:+] 0.4369 141 7 -6.77 -0.1099 MIMAT0000162 mmu-miR-152 105841 Dennd3 gguucaaGACAGUACGUGACu ||| | ||||||| gaccgaaCUGGCUUGCACUGg 2 15 424 444 [mm9:15:73401808-73401828:+] 0.5038 154 7 -21.92 -0.1448 MIMAT0000164 mmu-miR-154 105841 Dennd3 gcuUCCGUUG-UGCCUAUUGGAu || : || :| |||||||| uacAGCUUACUGCUGAUAACCUc 2 20 130 152 [mm9:15:73401514-73401536:+] 0.5040 154 7 -13.23 -0.1120 MIMAT0000165 mmu-miR-155 105841 Dennd3 ugGGGAUAGUGUUAAUCGUAAUu |:||:|| ||||||||| ggCUCUGUC----UUAGCAUUAa 2 22 542 560 [mm9:15:73401926-73401944:+] 0.5042 156 7 -19.31 -0.6931 MIMAT0000210 mmu-miR-181a 105841 Dennd3 ugaGUGGCUGUCGCAACUU-ACAa || || | : ||||| ||| acaCAACGCCUCUAUUGAACUGUa 2 21 678 701 [mm9:15:73402062-73402085:+] 0.5029 120 0 -9.44 -0.4169 MIMAT0000248 mmu-miR-30e 105841 Dennd3 gaagguCAGUUCCUACAAAUGu | | ||| ||||||| auguauGACCAGG-UGUUUACa 2 17 1222 1242 [mm9:15:73402606-73402626:+] 0.5128 150 7 -14.78 -0.3721 MIMAT0000248 mmu-miR-30e 105841 Dennd3 gaAGGUCAGUUCCUACAAAUGu ||: || | ||||||| ccUCUCCUCUUCG-UGUUUACu 2 21 266 286 [mm9:15:73401650-73401670:+] 0.4369 142 7 -10.67 -0.1017 MIMAT0000513 mmu-miR-19b 105841 Dennd3 agucAAAACGUACCUAAAC-GUGu || || ||| :|||| ||| aggcUUGUGAAUGUGUUUGCCACa 2 20 719 742 [mm9:15:73402103-73402126:+] 0.5086 131 0 -13.04 -0.2009 MIMAT0000514 mmu-miR-30c 105841 Dennd3 cgacucucacaucCUACAAAUGu |:||||||| ccauguaugaccaGGUGUUUACa 2 11 1220 1242 [mm9:15:73402604-73402626:+] 0.5128 146 7 -13.18 -0.3984 MIMAT0000514 mmu-miR-30c 105841 Dennd3 cgacucucacauccUACAAAUGu :||||||| ggccucuccucuucGUGUUUACu 2 10 264 286 [mm9:15:73401648-73401670:+] 0.4369 141 7 -6.77 -0.1099 MIMAT0000515 mmu-miR-30d 105841 Dennd3 gaaggucagcccCUACAAAUGu |:||||||| cauguaugaccaGGUGUUUACa 2 11 1221 1242 [mm9:15:73402605-73402626:+] 0.5128 146 7 -14.78 -0.3984 MIMAT0000515 mmu-miR-30d 105841 Dennd3 gaAGGUCAGCCCCUACAAAUGu ||: || | ||||||| ccUCUCCUCUUCG-UGUUUACu 2 21 266 286 [mm9:15:73401650-73401670:+] 0.4369 142 7 -12.10 -0.1017 MIMAT0000516 mmu-miR-148a 105841 Dennd3 uguuucaaGACAUCACGUGACu ||| ||||||| cgaccgaaCUGGCUUGCACUGg 2 15 423 444 [mm9:15:73401807-73401828:+] 0.5038 146 7 -17.55 -0.1448 MIMAT0000526 mmu-miR-15a 105841 Dennd3 guGUUUGGUAAUACACGA-CGAu || ::|| |: |||| ||| ucCAUGUCACUGACUGCUGGCUc 2 21 1009 1031 [mm9:15:73402393-73402415:+] 0.4900 120 0 -12.94 -0.1839 MIMAT0000531 mmu-miR-22 105841 Dennd3 ugucaagaagUUGA-CCGUCGAa ||:| ||||||| ucuguguagaAAUUGGGCAGCUg 2 13 516 538 [mm9:15:73401900-73401922:+] 0.5038 147 7 -15.79 -0.2024 MIMAT0000537 mmu-miR-27a 105841 Dennd3 cgccUUGAAUCGGUG-ACACUu |:|| | :||| ||||| acucAGCUGAAUCACAUGUGAc 2 18 225 246 [mm9:15:73401609-73401630:+] 0.5882 125 0 -13.58 -0.2587 MIMAT0000537 mmu-miR-27a 105841 Dennd3 cgCCUUGAAUCGGUG-ACACUu || ::||| | || ||||| caGGUGUUUA-CAACUUGUGAu 2 20 1231 1251 [mm9:15:73402615-73402635:+] 0.5128 121 0 -10.55 -0.8297 MIMAT0000546 mmu-miR-103 105841 Dennd3 aguauCGGGACAUGUUA-CGACGa | |:|||: || ||||| ucacuGGCUUGUGGCAUAGCUGCa 2 19 629 652 [mm9:15:73402013-73402036:+] 0.4972 122 0 -17.39 -0.1568 MIMAT0000567 mmu-miR-329 105841 Dennd3 uuUUUCCAA-UCGACCCACACAa ||: ||| || ||||||| gcAAGUGUUCUGCAAGGUGUGUu 2 21 761 783 [mm9:15:73402145-73402167:+] 0.5011 155 7 -17.24 -0.3210 MIMAT0000580 mmu-miR-148b 105841 Dennd3 uguuucaaGACACUACGUGACu ||| ||||||| cgaccgaaCUGGCUUGCACUGg 2 15 423 444 [mm9:15:73401807-73401828:+] 0.5038 146 7 -18.23 -0.1448 MIMAT0000582 mmu-miR-338-3p 105841 Dennd3 guuguuuuaGUGACUACGACCu :|: |||||||| guguguuugUAUGGAUGCUGGa 2 14 777 798 [mm9:15:73402161-73402182:+] 0.5011 149 7 -16.85 -0.1504 MIMAT0000582 mmu-miR-338-3p 105841 Dennd3 guuguuuuAGUGACUACGACCu | |: ||||||| cuuuuuguUAAUAAAUGCUGGu 2 15 1260 1281 [mm9:15:73402644-73402665:+] 0.5128 142 7 -11.79 -1.0949 MIMAT0000582 mmu-miR-338-3p 105841 Dennd3 guuGUUUUAGUGACU-ACGACCu | | :||||||| |||||| gguCCAUGUCACUGACUGCUGGc 2 20 1007 1029 [mm9:15:73402391-73402413:+] 0.4900 139 6 -22.66 -0.1217 MIMAT0000647 mmu-miR-107 105841 Dennd3 acuauCGGGACAUGUUA-CGACGa | |:|||: || ||||| ucacuGGCUUGUGGCAUAGCUGCa 2 19 629 652 [mm9:15:73402013-73402036:+] 0.4972 122 0 -14.79 -0.1568 MIMAT0000648 mmu-miR-10a 105841 Dennd3 guguuuaagcCUAGAU-GUCCCAu |||| | |||||| ccgucucugaGAUCAACCAGGGUc 2 14 940 963 [mm9:15:73402324-73402347:+] 0.4939 121 6 -15.87 -0.1569 MIMAT0000651 mmu-miR-19a 105841 Dennd3 agucAAAACGUAUCUAAAC-GUGu || || ||: :|||| ||| aggcUUGUGAAUGUGUUUGCCACa 2 20 719 742 [mm9:15:73402103-73402126:+] 0.5086 127 0 -11.61 -0.2009 MIMAT0000663 mmu-miR-218 105841 Dennd3 uguaccaaucuaGUUCGUGUu |||||||| aagcacaucucaCAAGCACAa 2 10 595 615 [mm9:15:73401979-73401999:+] 0.4972 145 7 -13.95 -0.2314 MIMAT0000663 mmu-miR-218 105841 Dennd3 uguaccaaucuagUUCGUGUu ||||||| uacuacaggcaggAAGCACAu 2 9 582 602 [mm9:15:73401966-73401986:+] 0.4972 140 7 -13.57 -0.1160 MIMAT0000671 mmu-miR-224 105841 Dennd3 uuGCCUUGGUGAUCACUGAAu | |||:||| ||||||| agCUGAAUCACAUGUGACUUg 2 20 229 249 [mm9:15:73401613-73401633:+] 0.5882 167 7 -21.56 -0.3297 MIMAT0000673 mmu-miR-181b 105841 Dennd3 uggGUGGCUGUCGUUACUU-ACAa || || | :| |||| ||| acaCAACGCCUCUAUUGAACUGUa 2 21 678 701 [mm9:15:73402062-73402085:+] 0.5029 120 0 -9.39 -0.4169 MIMAT0000679 mmu-miR-217 105841 Dennd3 agGUCAG--UCAA-GGACUAC-GUCAu || || |||| ::| ||| |||| ugCAUUCUAAGUUAUUUAAUGCCAGUc 2 22 1194 1220 [mm9:15:73402578-73402604:+] 0.5128 123 0 -11.33 -0.6665 MIMAT0004684 mmu-miR-362-3p 105841 Dennd3 acUUAGGA-ACUUGUCCACACAa |:| :| || | |||||||| caAGUGUUCUGCA-AGGUGUGUu 2 21 762 783 [mm9:15:73402146-73402167:+] 0.5011 153 7 -18.67 -0.3237 MIMAT0000741 mmu-miR-377 105841 Dennd3 uguUUUCAACGGAAACACA-CUa |:| |||:| ||||| || gccAGAUUUGUC--UGUGUAGAa 2 20 506 526 [mm9:15:73401890-73401910:+] 0.5038 120 0 -11.29 -0.5722 MIMAT0000747 mmu-miR-382 105841 Dennd3 gcuuagguggugcuUGUUGAAg ||||||| augaccagguguuuACAACUUg 2 9 1226 1247 [mm9:15:73402610-73402631:+] 0.5128 140 7 -12.97 -0.6268 MIMAT0004745 mmu-miR-384-5p 105841 Dennd3 uguaACGGAUCCUUAACAAAUGu || | ||| ||||||| uguaUGACCAGG---UGUUUACa 2 20 1223 1242 [mm9:15:73402607-73402626:+] 0.5128 147 7 -15.29 -0.3810 MIMAT0004745 mmu-miR-384-5p 105841 Dennd3 uguaacggauccuuaACAAAUGu ||||||| ggccucuccucuucgUGUUUACu 2 9 264 286 [mm9:15:73401648-73401670:+] 0.4369 140 7 -11.32 -0.1088 MIMAT0003453 mmu-miR-497 105841 Dennd3 auGUUUGGUGUCACACGA-CGAc || ::||| | |||| ||| ucCAUGUCACUGACUGCUGGCUc 2 21 1009 1031 [mm9:15:73402393-73402415:+] 0.4900 124 0 -15.08 -0.1822 MIMAT0003513 mmu-miR-505 105841 Dennd3 ucUUUUGGUCGUUCACA-ACUGc || :||||: ||| |||| uuAAUGCCAGUCCAUGUAUGACc 2 21 1209 1231 [mm9:15:73402593-73402615:+] 0.5128 124 0 -12.25 -0.4573 MIMAT0004324 mmu-miR-181d 105841 Dennd3 uggGUGGCUGUUGUUACUU-ACAa || || | :| |||| ||| acaCAACGCCUCUAUUGAACUGUa 2 21 678 701 [mm9:15:73402062-73402085:+] 0.5029 120 0 -10.00 -0.4169

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G063804 Dennd3 Mus musculus 105841

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Dennd3 mmu-miR-193star beg:979 end:998 pic:3' AGTAGAACGGGCGTTTCTGGGT 5'& ||||.| |||||||| &5' ------TGCCTGTGAAGACCCA 3' Dennd3 mmu-miR-218 beg:583 end:602 pic:3' TGTACCAATCTAGTTCGTGTT 5'& ||| || .|| |||||| &5' ACA-GGCAGGA---AGCACA- 3' Dennd3 mmu-miR-218 beg:604 end:616 pic:3' TGTACCAATCTAGTTCGTGTT 5'& ||||||||| &5' ------------CAAGCACAA 3' Dennd3 mmu-miR-669a beg:667 end:685 pic:3' TGTACTTGTACGTGTGTGTTGA 5'& | ||.||.. ||||||| &5' ----GCACGTGTGGACACAAC- 3' Dennd3 mmu-miR-669l beg:667 end:685 pic:3' TGTATATGTACGTGTGTGTTGA 5'& ||.||.. ||||||| &5' ------ACGTGTGGACACAAC- 3' Dennd3 mmu-miR-199a-5p beg:728 end:747 pic:3' CTTGTCCATCAGACT-TGTGACCC 5'& || ||.|| ||||||| &5' ------GT-GTTTGCCACACTGG- 3' Dennd3 mmu-miR-155 beg:541 end:561 pic:3' TGGGGATAGTGTTAATCGTAATT 5'& |.||.|| |||||||||| &5' --CTCTGTC----TTAGCATTAA 3' Dennd3 mmu-miR-667 beg:1107 end:1117 pic:3' GAACCCGACCCACCGTCCACAGT 5'& ||||||| &5' ---------------AGGTGTC- 3' Dennd3 mcmv-miR-m107-1-5p beg:461 end:476 pic:3' CCACTGAGCTCTGCTCACTGGC 5'& |.|| ||||||| &5' --------GGGAA-AGTGACC- 3' Dennd3 mmu-miR-338-3p beg:783 end:799 pic:3' GTTGTTTTAGTGACTACGACCT 5'& .|. ||||||||| &5' ---------TATGGATGCTGGA 3' Dennd3 mmu-miR-15astar beg:799 end:819 pic:3' ACTCCGTCGTGTCA--TACCGGAC 5'& ||| || |||||||| &5' -------GCAGAGGAAATGGCCTG 3' Dennd3 mmu-miR-2141 beg:104 end:118 pic:3' TTGAAAAGACTGTGGAGGA 5'& || |||||||| &5' -------CTT-CACCTCCT 3' Dennd3 mmu-miR-128 beg:52 end:68 pic:3' TTTCTCTGGCCAAGTGACACT 5'& ||| ||||||| &5' ------ACCCTC-CACTGTG- 3' Dennd3 mmu-miR-760 beg:343 end:362 pic:3' AGGGGTGTCTGGGTCTCGGC 5'& ||||||| ||||||| &5' ---CCACAGAAACAGAGCC- 3' Dennd3 mmu-miR-1927 beg:953 end:971 pic:3' AGTCAGGGATTGTAGGTCTCCAG 5'& || |. .||||||||| &5' ------CC-AGGGTCCAGAGGT- 3' Dennd3 mmu-miR-504 beg:945 end:964 pic:3' CTATCTCACGTCTGGTCCCAGA 5'& ||| || ||||||||| &5' ----GAGATCA-ACCAGGGTC- 3' Dennd3 mmu-miR-483 beg:930 end:945 pic:3' GAGGGAAGAGAAGAGGGCAGAA 5'& ||| ||||||| &5' -TCCACG-------CCCGTCT- 3' Dennd3 mcmv-miR-m01-3 beg:98 end:114 pic:3' AGCTCCGTTGTCAGCGAAGTGGC 5'& |||..| ||||||| &5' ----GGCGGC-----CTTCACC- 3' Dennd3 mmu-miR-668 beg:607 end:625 pic:3' CCATCACCCG-GCTCGGCTCACTGT 5'& || | || .||||||| &5' --------GCACAAG-TGAGTGAC- 3' Dennd3 mmu-miR-715 beg:703 end:721 pic:3' GTGCGCCCCCACACGTGCCTC 5'& || ||||||||| &5' ---GCTATC---TGCACGGAG 3' Dennd3 mmu-miR-106b beg:639 end:657 pic:3' TAGACGTGACAGTCGTGAAAT 5'& |||. | | |||||||. &5' ----GCATAG-CTGCACTTTG 3' Dennd3 mmu-miR-31star beg:630 end:649 pic:3' CTACCGTTATACAACCGTATCGT 5'& |||| || ||||||||| &5' --TGGCT---TG-TGGCATAGC- 3' Dennd3 mmu-miR-3471 beg:1054 end:1074 pic:3' TTACGGAATGTCAACCTAGAGT 5'& | |.||| |||||||| &5' ----CAGTGCAGA-GGATCTCA 3' Dennd3 mmu-miR-329 beg:764 end:784 pic:3' TTTTTCCAAT-CGACCCACACAA 5'& ||| || |||||||| &5' ------GTTCTGCAAGGTGTGTT 3' Dennd3 mmu-miR-362-3p beg:764 end:784 pic:3' ACTTAGGAACTTGTCCACACAA 5'& | .|.|| ||||||||| &5' -GTGTTCTGCA--AGGTGTGTT 3' Dennd3 mmu-miR-485star beg:1214 end:1231 pic:3' CTCTCCTCTC-GGCACATACTGA 5'& || || |||||||| &5' --------AGTCCATGTATGAC- 3' Dennd3 mmu-miR-466g beg:1091 end:1102 pic:3' ACACACACGTACACAGACATA 5'& |||||||| &5' -------------GTCTGTAT 3' Dennd3 mmu-miR-382star beg:714 end:732 pic:3' TTTTTCACAA-CAGGCACTTACT 5'& | | .||||||| &5' -------GGAGGCTTGTGAATG- 3' Dennd3 mcmv-miR-m01-1 beg:257 end:276 pic:3' GGCAAGCTGCAATAAGAGGAGA 5'& |.| |||||||| &5' ------GGCTGGCCTCTCCTCT 3' Dennd3 mcmv-miR-m21-1 beg:853 end:870 pic:3' GCCGAACTTGCACAGGGGATA 5'& ||||.. ||||||. &5' ---CTTGGGA---TCCCCTG- 3' Dennd3 mghv-miR-M1-3 beg:1017 end:1036 pic:3' TTCGCGTTGAGGA-CGAGTGGAG 5'& .||| || ||||||.| &5' ------GACTGCTGGCTCACTT- 3' Dennd3 mmu-let-7f beg:151 end:171 pic:3' TTGATATGTTAGATGATGGAGT 5'& |||.|| .||||||| &5' -ACTGTAAAG----TTACCTCA 3' Dennd3 mmu-let-7fstar beg:771 end:791 pic:3' CCCTTCCGTTATCTAACATATC 5'& ||||.. | ||||||.| &5' ---AAGGTGT--GTTTGTATGG 3' Dennd3 mmu-let-7g beg:692 end:715 pic:3' TTGACATGT-TTGAT-GATGGAGT 5'& ||||||||| |.||| ||.| &5' AACTGTACATAGCTATCTGC---- 3' Dennd3 mmu-let-7g beg:151 end:171 pic:3' TTGACATGTTTGATGATGGAGT 5'& |||||| .||||||| &5' -ACTGTAAAG----TTACCTCA 3' Dennd3 mmu-let-7i beg:150 end:171 pic:3' TTGTCGTGTTTGAT-GATGGAGT 5'& ||| .||||||| &5' -----CACTGTAAAGTTACCTCA 3' Dennd3 mmu-miR-103 beg:4 end:26 pic:3' AGTATCGGGACAT-GTTACGACGA 5'& |||| ||| ||||||||. &5' -CATA---CTGAACCAATGCTGT- 3' Dennd3 mmu-miR-106b beg:89 end:110 pic:3' TAGACGTGACAGTCGTGAAAT 5'& .||||| ||| |.|| ||| &5' GTCTGCTCTGGCGGC-CTT-- 3' Dennd3 mmu-miR-107 beg:8 end:26 pic:3' ACTATCGGGACAT-GTTACGACGA 5'& ||| ||||||||. &5' --------CTGAACCAATGCTGT- 3' Dennd3 mmu-miR-1 beg:1185 end:1203 pic:3' TATGTATGAAGAAATGTAAGGT 5'& |||| |.|||||.| &5' ---CATAAA----TGCATTCTA 3' Dennd3 mmu-miR-1188 beg:1151 end:1170 pic:3' AGGACCGGGTTGGAGTGTGGT 5'& ||| ||. .||||||. &5' ----GGCACAGGTTCACACT- 3' Dennd3 mmu-miR-1190 beg:213 end:235 pic:3' CTGTCTCCCCTTG-GAGTCGACT 5'& ||| ||||||||| &5' ----GAGCTGCCAACTCAGCTGA 3' Dennd3 mmu-miR-124star beg:663 end:682 pic:3' TAGTTCCAGGCG---ACACTTGTGC 5'& |.|| ||||.|||| &5' --------CTGCACGTGTGGACAC- 3' Dennd3 mmu-miR-124star beg:1040 end:1058 pic:3' TAGTTCC-AGGCGACACTTGTGC 5'& || ||| || ||||||| &5' -----GGCTCC-CT-TGAACAC- 3' Dennd3 mmu-miR-125a-5p beg:457 end:468 pic:3' AGTGTCCAATTTCCCAGAGTCCCT 5'& .||||||| &5' ----------------TTCAGGGA 3' Dennd3 mmu-miR-125b-5p beg:457 end:468 pic:3' AGTGTTCAATCCCAGAGTCCCT 5'& .||||||| &5' --------------TTCAGGGA 3' Dennd3 mmu-miR-130a beg:423 end:444 pic:3' TACGGGAAA-ATTGTAACGTGAC 5'& || |..| |||||||| &5' ----CCGAACTGGC-TTGCACTG 3' Dennd3 mmu-miR-130b beg:423 end:444 pic:3' TACGGGAAAGTAGTAACGTGAC 5'& || |||||||| &5' ----CCGAACTGGCTTGCACTG 3' Dennd3 mmu-miR-134 beg:91 end:113 pic:3' GGGGAGACCAGTTGGTCAGTGT 5'& |. |||||| |..|| |||| &5' CTGCTCTGG-CGGCCT-TCAC- 3' Dennd3 mmu-miR-138star beg:57 end:77 pic:3' GG-GACCACAACACTTCATCGGC 5'& || || |||| |||.||| &5' CCACT-GTGTC----AGTGGCC- 3' Dennd3 mmu-miR-141star beg:48 end:74 pic:3' AGGTTGTGACGTGAC-CTTCTAC 5'& |||||| || ||||| | .|| &5' TCCAACCCTCCACTGTGTCAGTG 3' Dennd3 mmu-miR-148a beg:428 end:444 pic:3' TGTTTCAAGACATCACGTGACT 5'& ||| |||||||. &5' --------CTGGCTTGCACTGG 3' Dennd3 mmu-miR-148b beg:428 end:444 pic:3' TGTTTCAAGACACTACGTGACT 5'& ||| |||||||. &5' --------CTGGCTTGCACTGG 3' Dennd3 mmu-miR-152 beg:423 end:444 pic:3' GGTTCAAGACAGTACGTGACT 5'& ||.| ||| |||||||. &5' CCGAA--CTGGCTTGCACTGG 3' Dennd3 mmu-miR-154 beg:131 end:152 pic:3' GCTTCCGT-TG-TGCCTATTGGAT 5'& || || .| |||||||| &5' -----GCTTACTGCTGATAACCT- 3' Dennd3 mmu-miR-16star beg:0 end:25 pic:3' AGTCGTCGTGTCA----GTTATGACC 5'& ||| ||.| ||||.||| &5' --AGCTCCATACTGAACCAATGCTG- 3' Dennd3 mmu-miR-181a beg:711 end:733 pic:3' TGAGTGGCTGTCGCA-ACTTACAA 5'& ||| || .|| ||||||| &5' ---CACGGA-GGCTTGTGAATGT- 3' Dennd3 mmu-miR-181b beg:711 end:733 pic:3' TGGGTGGCTGTCGT-TACTTACAA 5'& ||| || .|| .||||||| &5' ---CACGGA-GGCTTGTGAATGT- 3' Dennd3 mmu-miR-181c beg:711 end:733 pic:3' TGAGTGGCTGTCCA-ACTTACAA 5'& ||| || . ||||||| &5' ---CACGGAGGCTTGTGAATGT- 3' Dennd3 mmu-miR-181d beg:711 end:733 pic:3' TGGGTGGCTGTTGT-TACTTACAA 5'& ||| || ..| .||||||| &5' ---CACGGA-GGCTTGTGAATGT- 3' Dennd3 mmu-miR-184 beg:533 end:552 pic:3' TGGGAATAGTCAAGAGGCAGGT 5'& || |.| |||.|||. &5' ---CTGAACGG--CTCTGTCT- 3' Dennd3 mmu-miR-187 beg:785 end:803 pic:3' GGCCGACGTTGTGTTCTGTGCT 5'& .|| ||| .|||||| &5' -TGGATGCT-----GGACACG- 3' Dennd3 mmu-miR-188-5p beg:53 end:75 pic:3' GGGAGGTGGTACGTTC-CCTAC 5'& ||||||||..||. || || &5' CCCTCCACTGTGTCAGTGG--- 3' Dennd3 mmu-miR-18a beg:639 end:657 pic:3' GATAGACGTGATCTACGTGGAAT 5'& ||| ||| |||||.||. &5' ------GCA-TAGCTGCACTTTG 3' Dennd3 mmu-miR-1904 beg:452 end:475 pic:3' GGAGGGAGGTCTCCTCGTC-TTG 5'& |||||.| ||| ||| || .|| &5' CCTCCTT-CAG-GGAA-AGTGAC 3' Dennd3 mmu-miR-1928 beg:1124 end:1143 pic:3' CTCGACC-GTTACATCGA 5'& || || ||||||.|| &5' -AGAGGGACAATGTGGC- 3' Dennd3 mmu-miR-1929 beg:164 end:183 pic:3' GAGACGAGATATTTCAGGATCTT 5'& ||| ||| ||||||| &5' -----CTC-ATATTA-CCTAGAA 3' Dennd3 mmu-miR-1931 beg:644 end:659 pic:3' CGGTAGCGTGGTCG-GGAACGTA 5'& || || |.||||.| &5' ------GCT---GCACTTTGCGT 3' Dennd3 mmu-miR-1935 beg:533 end:552 pic:3' TCTCTAGGCG-GTCGGAGACGGA 5'& |.| |.| |||||.|| &5' ------CTGAACGG-CTCTGTCT 3' Dennd3 mmu-miR-1940 beg:34 end:55 pic:3' TTGACGAGGTGGAAGAGTCAGGAGGTA 5'& || ||.||| | |. |||||| &5' ----GC-CCGCCTCC-CGACCCTCCA- 3' Dennd3 mmu-miR-1944 beg:335 end:353 pic:3' TTAGTCTTGAACTGTAAGTC-GTGTCTC 5'& ||| |||| |||||| &5' ------------ACAGTCAGCCACAGA- 3' Dennd3 mmu-miR-1946a beg:467 end:486 pic:3' TTTTCACACACGGTGGTGACGGGCCGA 5'& |. |||| |||.||| &5' ----------GTGACCAAGGCCTGGC- 3' Dennd3 mmu-miR-1950 beg:1045 end:1066 pic:3' ACTGGTATAGGAATC-----TACGTCT 5'& ||||. .|||||| &5' ---------CCTTGAACACAGTGCAGA 3' Dennd3 mmu-miR-1951 beg:356 end:378 pic:3' ATCGGTGTGGTCAGAGGTGATG 5'& |||| | .||.||||||| &5' -AGCCTTTCGGGTTTCCACTA- 3' Dennd3 mmu-miR-1960 beg:483 end:507 pic:3' TCGGGAGAAGA--TTGTCGTGACC 5'& |||| .||||.||||| &5' -GCCCAGGAAGGGGACAGTACTGG 3' Dennd3 mmu-miR-1961 beg:152 end:171 pic:3' AAGATTGAT-GATGGAGT 5'& ||. .||||||| &5' --CTGTAAAGTTACCTCA 3' Dennd3 mmu-miR-1967 beg:864 end:883 pic:3' CGTAGAAGAGGGGTCCTAGGAGT 5'& || ||. ||.||.||| &5' -------CTGCCTTGGGTCTTCA 3' Dennd3 mmu-miR-1968 beg:641 end:653 pic:3' TCAGGTGGTAGGAATTGTCGACGT 5'& |.||||||| &5' ---------------ATAGCTGCA 3' Dennd3 mmu-miR-1968 beg:1005 end:1028 pic:3' TCAGGTGGTAGGAATTGTCGACGT 5'& .||||| ..|| |.|| |||| &5' GGTCCA-TGTCACTGACTGCTG-- 3' Dennd3 mmu-miR-1970 beg:352 end:376 pic:3' GTTTCGGATAGGGGTCACT-GTGT 5'& ||.||||| ..| .|| ||| &5' CAGAGCCT--TTCGGGTTTCCAC- 3' Dennd3 mmu-miR-1983 beg:71 end:88 pic:3' TCTTTTGTACGA--GGTCCACTC 5'& || |.|||||.| &5' ---------GCCAGCTAGGTGGG 3' Dennd3 mmu-miR-199a-5p beg:782 end:798 pic:3' CTTGTCCATCAGACTTGTGACCC 5'& || ||.|..|||| &5' ---------GTATGGATGCTGG- 3' Dennd3 mmu-miR-199a-5p beg:425 end:446 pic:3' CTTGTCCATCAGACTTGTGACCC 5'& |||| || || .||||||| &5' GAACTGG----CTT-GCACTGGG 3' Dennd3 mmu-miR-199b beg:131 end:145 pic:3' ATTGGTTACACGTCTGATGACA 5'& || |||.||| &5' ----------GCTTACTGCTG- 3' Dennd3 mmu-miR-199bstar beg:425 end:446 pic:3' CTTGTCCATCAGATTTGTGACCC 5'& |||| || || .||||||| &5' GAACTGG----CTT-GCACTGGG 3' Dennd3 mmu-miR-199bstar beg:1263 end:1281 pic:3' CTTGTCCATCAG--ATTTGTGACCC 5'& ||. ||||..|||| &5' ---------GTTAATAAATGCTGG- 3' Dennd3 mmu-miR-199bstar beg:724 end:747 pic:3' CTTGTCCATCAGATT-TGTGACCC 5'& |||. || ||.|. ||||||| &5' GAAT--GT-GTTTGCCACACTGG- 3' Dennd3 mmu-miR-19b beg:773 end:801 pic:3' AGTCA---AAACGTACCTAA-ACGTGT 5'& .|| ||||.|||||| || ||| &5' --GGTGTGTTTGTATGGATGCTGGACA 3' Dennd3 mmu-miR-200astar beg:1159 end:1180 pic:3' AGGTCGTGACAGGC-CATTCTAC 5'& |.|| |||||||. |||| &5' TTCA-CACTGTCTTTGTAA---- 3' Dennd3 mmu-miR-208a beg:540 end:554 pic:3' TGTTCGAAAAACGAG-CAGAATA 5'& |||| |||||| &5' -----------GCTCTGTCTTA- 3' Dennd3 mmu-miR-20a beg:639 end:657 pic:3' GATGGACGTGATATTCGTGAAAT 5'& |||. |||||||. &5' ------GCATAGCT-GCACTTTG 3' Dennd3 mmu-miR-20astar beg:1046 end:1065 pic:3' GAAATTCACGAGCA----TTACGTCA 5'& ||.| |.||||| &5' ---------CTTGAACACAGTGCAG- 3' Dennd3 mmu-miR-2140 beg:640 end:656 pic:3' TGGTGGTTCTAGACGTGGA 5'& ||. ||||||.| &5' --CATAG----CTGCACTT 3' Dennd3 mmu-miR-2140 beg:423 end:443 pic:3' TGGTGGTTCTAGACGTGGA 5'& |||. | .|||||. &5' ACCGAACTGGCTTGCACT- 3' Dennd3 mmu-miR-214star beg:571 end:593 pic:3' CGTGTCGTTCACATCTGTCCGT 5'& ||| |.| ||||||| &5' --ACACCGACTACT-ACAGGCA 3' Dennd3 mmu-miR-219 beg:328 end:345 pic:3' TCTTAACGCAAACCTGTTAGT 5'& |.|| |||.||| &5' ------GTGTGTC-ACAGTCA 3' Dennd3 mmu-miR-21star beg:528 end:550 pic:3' CTGTCGGGTAGCTGACGACAAC 5'& |.||||. | ||.|| |||| &5' GGCAGCTGAACGGCT-CTGT-- 3' Dennd3 mmu-miR-221 beg:1121 end:1143 pic:3' CTTTGGGTCG-TCTGTTACATCGA 5'& .|||| .||||||||.|| &5' ----TCCAGAGGGACAATGTGGC- 3' Dennd3 mmu-miR-22 beg:516 end:538 pic:3' TGTCAAGAAGTTGA-CCGTCGAA 5'& || ||.| ||||||| &5' ---GTGTAGAAATTGGGCAGCT- 3' Dennd3 mmu-miR-224 beg:226 end:250 pic:3' TTGCCTTGGTGATCACTGAAT 5'& |.| |||.||| |||||||. &5' AGCTGAATCACATGTGACTTG 3' Dennd3 mmu-miR-23a beg:1120 end:1141 pic:3' CCTTTAGGGA--CC-GTTACACTA 5'& .||| || |||||||. &5' ----GTCCAGAGGGACAATGTGG- 3' Dennd3 mmu-miR-23b beg:1121 end:1141 pic:3' CCATTAGGGA--CC-GTTACACTA 5'& .||| || |||||||. &5' ----GTCCAGAGGGACAATGTGG- 3' Dennd3 mmu-miR-26b beg:958 end:978 pic:3' TGGATAGGACTTAATGAACTT 5'& .||| ||. |||||||. &5' ----GTCCAGAGGTACTTGAG 3' Dennd3 mmu-miR-27a beg:968 end:992 pic:3' CGCCTTGAA-TCGGT----GACACTT 5'& |||| |||| ||||||| &5' -----ACTTGAGCCCATGCCTGTGAA 3' Dennd3 mmu-miR-2861 beg:1145 end:1165 pic:3' GGCGGGCGGCG-GTCCGGGG 5'& ||| || ||||..| &5' --GCCAAGGGCACAGGTTC- 3' Dennd3 mmu-miR-2861 beg:980 end:1003 pic:3' GGCGGGCG-----GCGGTCCGGGG 5'& .|||.|. | |||||||. &5' -TGCCTGTGAAGAC-CCAGGCCT- 3' Dennd3 mmu-miR-291b-3p beg:636 end:657 pic:3' TGTTTGTTTTACCT-----ACGTGAAA 5'& .||| |||||||| &5' ---------GTGGCATAGCTGCACTTT 3' Dennd3 mmu-miR-296-3p beg:29 end:53 pic:3' CCTCTCGGA-GGTGGGTTGGGAG 5'& |||.||| || |||.|||||| &5' -GAGGGCCCGCCTCCCGACCCTC 3' Dennd3 mmu-miR-296-5p beg:73 end:92 pic:3' TGTCCTAACTCCCCCCCGGGA 5'& ||| ||| ||||||. &5' -CAGCT---AGGTGGGGCCT- 3' Dennd3 mmu-miR-29astar beg:399 end:422 pic:3' GACTTGT-GGTTTTCTTTAGTCA 5'& ||||.|| .|.||.| ||||| &5' CTGAGCATTCGAAGGTAATCA-- 3' Dennd3 mmu-miR-300 beg:643 end:659 pic:3' CTTCTCTCGAACG-GGAACGTAT 5'& ||| ||| |.||||.| &5' ------AGC-TGCACTTTGCGT- 3' Dennd3 mmu-miR-301b beg:421 end:444 pic:3' CGAAACTGTTATGGT--AACGTGAC 5'& ||| ||.. |||||||| &5' -----GACCGAACTGGCTTGCACTG 3' Dennd3 mmu-miR-302c beg:578 end:601 pic:3' GGTGAC-TTTGTACCTTCGTGAA 5'& |.||| |..|| |||||||| &5' CTACTACAGGCA-GGAAGCAC-- 3' Dennd3 mmu-miR-30a beg:1227 end:1243 pic:3' GAAGGTCAGCTCCTACAAATGT 5'& |||| .|||||||| &5' ---CCAG------GTGTTTACA 3' Dennd3 mmu-miR-30b beg:1224 end:1243 pic:3' TCGACTCACATCCTACAAATGT 5'& ||| ||| |||||||| &5' ---TGACC--AGG-TGTTTACA 3' Dennd3 mmu-miR-30c beg:1229 end:1243 pic:3' CGACTCTCACATCCTACAAATGT 5'& ||| |||||||| &5' -----------AGG-TGTTTACA 3' Dennd3 mmu-miR-30d beg:1227 end:1243 pic:3' GAAGGTCAGCCCCTACAAATGT 5'& |||| .|||||||| &5' ---CCAG------GTGTTTACA 3' Dennd3 mmu-miR-30e beg:1227 end:1243 pic:3' GAAGGTCAGTTCCTACAAATGT 5'& |||| .|||||||| &5' ---CCAG------GTGTTTACA 3' Dennd3 mmu-miR-326 beg:385 end:395 pic:3' TGACCTCCTTCCCGGGTCTCC 5'& .|||||| &5' -------------TCCAGAG- 3' Dennd3 mmu-miR-326 beg:1120 end:1132 pic:3' TGACCTCCTTCCCGGGTCTCC 5'& |.||||||| &5' ------------GTCCAGAGG 3' Dennd3 mmu-miR-326 beg:955 end:970 pic:3' TGACCTCCTTCCCGGGTCTCC 5'& ||||.||||||| &5' ---------AGGGTCCAGAGG 3' Dennd3 mmu-miR-330 beg:946 end:970 pic:3' CGGATTCT-GTG---TCCGGGTCTCT 5'& |.||| || .||.||||||. &5' ---TGAGATCAACCAGGGTCCAGAGG 3' Dennd3 mmu-miR-33 beg:1048 end:1064 pic:3' ACGTTACGTTGATGTTACGTG 5'& || ||| |||.|||| &5' -----TG-AAC-ACAGTGCA- 3' Dennd3 mmu-miR-331-5p beg:969 end:988 pic:3' CCTAGGGACCCTGGTATGGATC 5'& |.|| | ||||.|||. &5' -----CTTGAGCCCATGCCTG- 3' Dennd3 mmu-miR-331-5p beg:847 end:876 pic:3' CCTA-GGGACCCTGGT--ATGG-ATC 5'& ||| ||.|||||.| |.|| |.| &5' GGAGCCCTTGGGATCCCCTGCCTTGG 3' Dennd3 mmu-miR-337-3p beg:518 end:541 pic:3' TCCGTAGTATATCC-TCGACTT 5'& |.| |.|| ||||||| &5' --GTAGAAATTGGGCAGCTGAA 3' Dennd3 mmu-miR-34a beg:1151 end:1173 pic:3' TGTTG-GTCGATTCTGTGACGGT 5'& ..| ||| | ||||||.| &5' --GGCACAGGTTC-ACACTGTC- 3' Dennd3 mmu-miR-351 beg:445 end:468 pic:3' GTCCGAGTTTCCCGAGG-AGTCCCT 5'& ||||. |||| ||||||| &5' CAGGTGATTC---CTCCTTCAGGGA 3' Dennd3 mmu-miR-376c beg:509 end:523 pic:3' TGCACTTTAAAGGAGATACAA 5'& ||. |||.||| &5' ---------TTTGTCTGTGT- 3' Dennd3 mmu-miR-378 beg:947 end:967 pic:3' GGAAGACTGA--GGT-TCAGGTCA 5'& ||. ||| .|||||| &5' ------GATCAACCAGGGTCCAG- 3' Dennd3 mmu-miR-380-5p beg:939 end:959 pic:3' GCGTACA-AGATACCAGTTGGTA 5'& || |||. | ||||||| &5' -----GTCTCTGAGATCAACCA- 3' Dennd3 mmu-miR-382 beg:1226 end:1247 pic:3' GCTTAGGTGGTGCT----TGTTGAAG 5'& . |||| | ||||||| &5' -----TGACCAGGTGTTTACAACTT- 3' Dennd3 mmu-miR-384-5p beg:1224 end:1243 pic:3' TGTAAC-GGATCCTTAACAAATGT 5'& || || ||| |||||||| &5' ----TGACC-AGG---TGTTTACA 3' Dennd3 mmu-miR-412 beg:430 end:453 pic:3' GCCGATC---ACCTGGTCCACTT 5'& |||| |||. ||||||| &5' -GGCTTGCACTGGG-CAGGTGA- 3' Dennd3 mmu-miR-431star beg:82 end:109 pic:3' TCTTCGG---GACGTT-CTGCTGGAC 5'& |..||| |||| |.||.||| &5' -GGGGCCTGTCTGCTCTGGCGGCCT- 3' Dennd3 mmu-miR-449a beg:1155 end:1173 pic:3' TGGTCGATTGTTATGTGACGGT 5'& ||| | ||||||.| &5' --CAGGTTC----ACACTGTC- 3' Dennd3 mmu-miR-449b beg:1152 end:1174 pic:3' CG-GTCGATTGTTGTGACGGA 5'& || ||| | | ||||||.|| &5' GCACAGGTT-C-ACACTGTCT 3' Dennd3 mmu-miR-449c beg:1155 end:1174 pic:3' GGTCGATCGTTACGTGACGGA 5'& ||| | || |||||.|| &5' -CAGGTT-CA---CACTGTCT 3' Dennd3 mmu-miR-450a-3p beg:865 end:884 pic:3' TACTTACGTTTCGTAGGGGTTA 5'& ||| | .||..||| &5' -----TGCCTTGGGTCTTCAA- 3' Dennd3 mmu-miR-450b-5p beg:753 end:778 pic:3' ATAAGTCC-TTGTATGACGTTTT 5'& |||| |. | ||||||.. &5' -ATTCTGCAAGTGTTCTGCAAGG 3' Dennd3 mmu-miR-466g beg:503 end:523 pic:3' ACACACACG---TACACAGACATA 5'& || || |||||||.| &5' -------GCCAGATTTGTCTGTGT 3' Dennd3 mmu-miR-469 beg:939 end:972 pic:3' CCTGTGGTTCTAGTTA---CTT--TCTCCGT 5'& | | | ||||||| |. |||||.| &5' -GTCTCTGAGATCAACCAGGGTCCAGAGGTA 3' Dennd3 mmu-miR-470 beg:468 end:493 pic:3' TGAGTGGTCACGG-TCAGGTTCTT 5'& | |||| ||| .| |||.||| &5' --TGACCAAGGCCTGGCCCAGGAA 3' Dennd3 mmu-miR-488 beg:343 end:366 pic:3' CTGGT-TCTTTG--TCGGAAAGTT 5'& .||| |||||| ||||||||. &5' -GCCACAGAAACAGAGCCTTTCG- 3' Dennd3 mmu-miR-500 beg:762 end:781 pic:3' ACTTGGGAACGGGTCCACGTAA 5'& | . | ||| |||||..| &5' -GTGTTC-TGCA-AGGTGTGT- 3' Dennd3 mmu-miR-501-5p beg:990 end:1010 pic:3' AAAGTGGGTCCCTGTTTCCTAA 5'& ||||||| ..||||.| &5' ----ACCCAGGCCTGAAGGGT- 3' Dennd3 mmu-miR-503star beg:486 end:505 pic:3' GGTCCGTCACCTTTGTTATGAG 5'& |||| || |||.|||| &5' -CAGGAA--GGGGACAGTACT- 3' Dennd3 mmu-miR-542-3p beg:326 end:341 pic:3' AAAGTCAATAGTTAGACAGTGT 5'& .|.| ||||||| &5' ----------TAGTGTGTCACA 3' Dennd3 mmu-miR-592 beg:664 end:684 pic:3' TGTAGTAGCGTATAA--CTGTGTTA 5'& .||| | ||||||| &5' -------TGCACGTGTGGACACAA- 3' Dennd3 mmu-miR-665 beg:256 end:280 pic:3' TCC--CTGGAGTCGGAGGACCA 5'& ||| |.|||| ||||.| || &5' AGGCTGGCCTCT-CCTCTTCGT 3' Dennd3 mmu-miR-667 beg:1220 end:1239 pic:3' GAACCCGACCCACC-GTCCACAGT 5'& || || |||||||. &5' -------TGTATGACCAGGTGTT- 3' Dennd3 mmu-miR-670 beg:449 end:468 pic:3' AAGTGGTGTATGTGAGTCCCTA 5'& | |. | | .||||||| &5' -TGATTCCT--CCTTCAGGGA- 3' Dennd3 mmu-miR-672 beg:1051 end:1074 pic:3' AGTGTGTGTCATGTGG-TTGGAGT 5'& |||||||.|| .|.|||| &5' ----ACACAGTGCAGAGGATCTCA 3' Dennd3 mmu-miR-677 beg:0 end:16 pic:3' AGTCTTCGATTAGTAGTGACTT 5'& .|||| || .|||||| &5' ----GAGCTC--CA-TACTGAA 3' Dennd3 mmu-miR-677 beg:1004 end:1022 pic:3' AGTCTTCGATTAG---TAGTGACTT 5'& ..|| .||||||| &5' ---------GGTCCATGTCACTGA- 3' Dennd3 mmu-miR-678 beg:103 end:127 pic:3' GGAGGTC-AGGAACGTGGCTCTG 5'& |||.|| |||||| . |||| | &5' CCTTCACCTCCTTGGG-CGAG-C 3' Dennd3 mmu-miR-679 beg:386 end:411 pic:3' TGGT-TCTCAGTGGAG-TGTCAGG 5'& ||| |||||| .|| .|| || &5' -CCAGAGAGTCTTCTGAGCATTC- 3' Dennd3 mmu-miR-688 beg:20 end:31 pic:3' CTTATTCATCAGC-GGACGCT 5'& .| ||||.|| &5' -----------TGTCCTGTGA 3' Dennd3 mmu-miR-688 beg:718 end:729 pic:3' CTTATTCATCAGCGGACGCT 5'& ||.||.|| &5' ------------GCTTGTGA 3' Dennd3 mmu-miR-688 beg:824 end:841 pic:3' CTTATTCATCAGCGGACGCT 5'& ||| | ||||.|| &5' ------GTATCCTCCTGTGA 3' Dennd3 mmu-miR-688 beg:971 end:991 pic:3' CTTATTCATCAGCGGACGCT 5'& |.|| .|||||.|| &5' ---TGAGCCCATGCCTGTGA 3' Dennd3 mmu-miR-691 beg:476 end:493 pic:3' AAAAGACGGAGAGAAGTCCTTA 5'& |||| | |||||| &5' ------GCCTGGCC-CAGGAA- 3' Dennd3 mmu-miR-691 beg:578 end:597 pic:3' AAAAGACGGAGAGAAGTCCTTA 5'& || || |||||| &5' ----CTA-CTACAGGCAGGAA- 3' Dennd3 mmu-miR-691 beg:452 end:468 pic:3' AAAAGACGGAGAGAAGTCCTTA 5'& |||| |||||||.| &5' -------CCTC-CTTCAGGGA- 3' Dennd3 mmu-miR-693-5p beg:1029 end:1047 pic:3' CTTTTGAAAGCCTACACCGAC 5'& |||| || ||||||| &5' ----ACTTGAGG-TGTGGCT- 3' Dennd3 mmu-miR-696 beg:333 end:350 pic:3' GGGTGTCGTTCGTGTGCG 5'& .|||||. ||| ||| &5' -TCACAGTCAGC-CAC-- 3' Dennd3 mmu-miR-705 beg:32 end:54 pic:3' ACGGGTGGGGTGGA-GGGTGG 5'& ||||.||.| || ||| || &5' -GCCCGCCTC-CCGACCCTCC 3' Dennd3 mmu-miR-709 beg:860 end:882 pic:3' AGGAGGACGGAGA-CGGAGG 5'& ||| |||||||. |.||.| &5' TCC-CCTGCCTTGGGTCTTC 3' Dennd3 mmu-miR-715 beg:834 end:854 pic:3' GTGCGCCCCCACACGTGCCTC 5'& |.| | ||||.|||| &5' ---GTGAGTTC-TGCATGGAG 3' Dennd3 mmu-miR-715 beg:769 end:792 pic:3' GTGCGCCCC-CACA--CGTGCCTC 5'& || || |||| |.|.||| &5' ---GCAAGGTGTGTTTGTATGGA- 3' Dennd3 mmu-miR-742star beg:824 end:843 pic:3' ACTAATCGTTGGT--ACACTCAT 5'& |.| || ||||||| &5' ------GTATCCTCCTGTGAGT- 3' Dennd3 mmu-miR-743b-3p beg:1158 end:1176 pic:3' AGATAAGTCGTACTACAGAAAG 5'& .|||| || ||||||| &5' ---GTTCA-CAC--TGTCTTT- 3' Dennd3 mmu-miR-743b-5p beg:386 end:408 pic:3' ACTACCTGTGGTC-------AGACTTGT 5'& |||| |||||.|| &5' ---------CCAGAGAGTCTTCTGAGCA 3' Dennd3 mmu-miR-758 beg:323 end:342 pic:3' ATCACCTGGTC---CAGTGTTT 5'& |.|.|| ||||||. &5' -----GGCTAGTGTGTCACAG- 3' Dennd3 mmu-miR-760 beg:1043 end:1079 pic:3' AGGGG----------TGTCT----GGGTCTCGGC 5'& ||||. .|||| |.||||||| &5' TCCCTTGAACACAGTGCAGAGGATCTCAGAGCC- 3' Dennd3 mmu-miR-764-3p beg:251 end:271 pic:3' TGTCAAC-GGTGAT---ACCGGAGGA 5'& | || ||| |||||||. &5' ------GTCCTCTAGGCTGGCCTCT- 3' Dennd3 mmu-miR-764-5p beg:389 end:410 pic:3' TCCTC-CTGTACACTCGTGG 5'& ||| | | ||||||.. &5' --GAGAGTCTTCTGAGCATT 3' Dennd3 mmu-miR-767 beg:297 end:319 pic:3' ACGAGTCTGTTGGT-ACCACGT 5'& ||||| .||| |||||.| &5' -GCTCATT--GCCATTGGTGTA 3' Dennd3 mmu-miR-7a beg:387 end:403 pic:3' TGTTGTTTTAGTGA-TCAGAAGGT 5'& || |||||||. &5' ----------CAGAGAGTCTTCT- 3' Dennd3 mmu-miR-7b beg:387 end:403 pic:3' TGTTGTTTTAGTG-TTCAGAAGGT 5'& || .|||||||. &5' ----------CAGAGAGTCTTCT- 3' Dennd3 mmu-miR-872 beg:210 end:233 pic:3' GGACTTGATTGTTCA-TTGGAA 5'& |||||.||. ||| |.|. &5' CCTGAGCTGCCAACTCAGCT-- 3' Dennd3 mmu-miR-9 beg:375 end:396 pic:3' AGTATGTCGATCTATTGGTTTCT 5'& || | ||| |||.||| &5' ----ACTTCCTGATT-CCAGAGA 3' Dennd3 mmu-miR-9 beg:458 end:480 pic:3' AGTATGTCGATCTATTGGTTTCT 5'& ||| .| || |.|||||.| &5' TCAG--GGAAAG-TGACCAAGG- 3' Dennd3 mmu-miR-93 beg:639 end:657 pic:3' GATGGACGTGCTTGTCGTGAAAC 5'& |||. |.| |||||||| &5' ------GCAT-AGCTGCACTTTG 3' Dennd3 mmu-miR-26a beg:958 end:978 pic:3' TCGGATAGGACCTA-ATGAACTT 5'& .||| || |||||||. &5' -----GTCCA-GAGGTACTTGAG 3'

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Dennd3 RAID00007214 mmu-miR-6958-3p miRNA MIMAT0027817 Dennd3 mRNA 105841 Prediction 0.1828 Dennd3 RAID00065639 mmu-miR-377-3p miRNA MIMAT0000741 Dennd3 mRNA 105841 Prediction 0.1828 Dennd3 RAID00083198 mmu-miR-3059-3p miRNA MIMAT0014812 Dennd3 mRNA 105841 Prediction 0.1828 Dennd3 RAID00086516 mmu-miR-5125 miRNA MIMAT0020635 Dennd3 mRNA 105841 Prediction 0.1828 Dennd3 RAID00087968 mmu-miR-217-5p miRNA MIMAT0000679 Dennd3 mRNA 105841 Prediction 0.1828 Dennd3 RAID00283425 mmu-miR-30d-5p miRNA MIMAT0000515 Dennd3 mRNA 105841 Prediction 0.1828 Dennd3 RAID00434868 mmu-miR-485-3p miRNA MIMAT0003129 Dennd3 mRNA 105841 Prediction 0.1828 Dennd3 RAID00543400 mmu-miR-7684-3p miRNA MIMAT0029891 Dennd3 mRNA 105841 Prediction 0.1828 Dennd3 RAID00544145 mmu-miR-193a-5p miRNA MIMAT0004544 Dennd3 mRNA 105841 Prediction 0.1828 Dennd3 RAID00548021 mmu-miR-27a-3p miRNA MIMAT0000537 Dennd3 mRNA 105841 Prediction 0.1828 Dennd3 RAID00648446 mmu-miR-760-3p miRNA MIMAT0003898 Dennd3 mRNA 105841 Prediction 0.1828 Dennd3 RAID00849058 mmu-miR-103-3p miRNA MIMAT0000546 Dennd3 mRNA 105841 Prediction 0.1828 Dennd3 RAID00868585 mmu-miR-30a-5p miRNA MIMAT0000128 Dennd3 mRNA 105841 Prediction 0.1828 Dennd3 RAID00974087 mmu-miR-7022-3p miRNA MIMAT0027949 Dennd3 mRNA 105841 Prediction 0.1828 Dennd3 RAID01121725 mmu-miR-6934-3p miRNA MIMAT0027769 Dennd3 mRNA 105841 Prediction 0.1828 Dennd3 RAID01206609 mmu-miR-19b-3p miRNA MIMAT0000513 Dennd3 mRNA 105841 Prediction 0.1828 Dennd3 RAID01257237 mmu-miR-30c-5p miRNA MIMAT0000514 Dennd3 mRNA 105841 Prediction 0.1828 Dennd3 RAID01400707 mmu-miR-7024-3p miRNA MIMAT0027953 Dennd3 mRNA 105841 Prediction 0.1828 Dennd3 RAID01445090 mmu-miR-216a-3p miRNA MIMAT0017054 Dennd3 mRNA 105841 Prediction 0.1828 Dennd3 RAID01481483 mmu-miR-152-3p miRNA MIMAT0000162 Dennd3 mRNA 105841 Prediction 0.1828 Dennd3 RAID01506240 mmu-miR-384-5p miRNA MIMAT0004745 Dennd3 mRNA 105841 Prediction 0.1828 Dennd3 RAID01563897 mmu-miR-218-5p miRNA MIMAT0000663 Dennd3 mRNA 105841 Prediction 0.2202 Dennd3 RAID01613682 mmu-miR-29b-3p miRNA MIMAT0000127 Dennd3 mRNA 105841 Prediction 0.1828 Dennd3 RAID01627935 mmu-miR-19a-3p miRNA MIMAT0000651 Dennd3 mRNA 105841 Prediction 0.1828 Dennd3 RAID01701464 mmu-miR-181a-5p miRNA MIMAT0000210 Dennd3 mRNA 105841 Prediction 0.1828 Dennd3 RAID01743512 mmu-miR-148b-3p miRNA MIMAT0000580 Dennd3 mRNA 105841 Prediction 0.1828 Dennd3 RAID01751862 mmu-miR-10a-5p miRNA MIMAT0000648 Dennd3 mRNA 105841 Prediction 0.1828 Dennd3 RAID01793793 mmu-miR-224-5p miRNA MIMAT0000671 Dennd3 mRNA 105841 Prediction 0.1828 Dennd3 RAID01824285 mmu-miR-497a-5p miRNA MIMAT0003453 Dennd3 mRNA 105841 Prediction 0.1828 Dennd3 RAID01832789 mmu-miR-362-3p miRNA MIMAT0004684 Dennd3 mRNA 105841 Prediction 0.1828 Dennd3 RAID02010858 mmu-miR-505-3p miRNA MIMAT0003513 Dennd3 mRNA 105841 Prediction 0.1828 Dennd3 RAID02103832 mmu-miR-181b-5p miRNA MIMAT0000673 Dennd3 mRNA 105841 Prediction 0.1828 Dennd3 RAID02286843 mmu-miR-5121 miRNA MIMAT0020629 Dennd3 mRNA 105841 Prediction 0.1828 Dennd3 RAID02302597 mmu-miR-871-3p miRNA MIMAT0017265 Dennd3 mRNA 105841 Prediction 0.1828 Dennd3 RAID02427375 mmu-miR-15a-5p miRNA MIMAT0000526 Dennd3 mRNA 105841 Prediction 0.1828 Dennd3 RAID02432024 mmu-miR-382-5p miRNA MIMAT0000747 Dennd3 mRNA 105841 Prediction 0.1828 Dennd3 RAID02448376 mmu-miR-22-3p miRNA MIMAT0000531 Dennd3 mRNA 105841 Prediction 0.1828 Dennd3 RAID02468415 mmu-miR-338-3p miRNA MIMAT0000582 Dennd3 mRNA 105841 Prediction 0.1828 Dennd3 RAID02607534 mmu-miR-155-5p miRNA MIMAT0000165 Dennd3 mRNA 105841 Prediction 0.1828 Dennd3 RAID02614109 mmu-miR-27b-3p miRNA MIMAT0000126 Dennd3 mRNA 105841 Prediction 0.1828 Dennd3 RAID02680800 mmu-miR-181d-5p miRNA MIMAT0004324 Dennd3 mRNA 105841 Prediction 0.1828 Dennd3 RAID02798543 mmu-miR-148a-3p miRNA MIMAT0000516 Dennd3 mRNA 105841 Prediction 0.1828 Dennd3 RAID02816759 mmu-miR-30e-5p miRNA MIMAT0000248 Dennd3 mRNA 105841 Prediction 0.1828 Dennd3 RAID02833378 mmu-miR-107-3p miRNA MIMAT0000647 Dennd3 mRNA 105841 Prediction 0.1828 Dennd3 RAID02932276 mmu-miR-30b-5p miRNA MIMAT0000130 Dennd3 mRNA 105841 Prediction 0.1828 Dennd3 RAID03122957 mmu-miR-7016-3p miRNA MIMAT0027937 Dennd3 mRNA 105841 Prediction 0.1828 Dennd3 RAID03246753 mmu-miR-582-5p miRNA MIMAT0005291 Dennd3 mRNA 105841 Prediction 0.1828 Dennd3 RAID03590087 mmu-miR-154-5p miRNA MIMAT0000164 Dennd3 mRNA 105841 Prediction 0.1828 Dennd3 RAID03896704 mmu-miR-7002-3p miRNA MIMAT0027907 Dennd3 mRNA 105841 Prediction 0.1828 Dennd3 RAID03970698 mmu-miR-329-3p miRNA MIMAT0000567 Dennd3 mRNA 105841 Prediction 0.1828