DNA & RNA Element - microRNA |
Mirbase Acc | miRNA Name | Gene ID | Gene Symbol | miRNA Alignment | Alignment | Gene Alignment | miRNA Start | miRNA End | Gene Start | Gene End | Genome Coordinates | Conservation | Align Score | Seed Cat | Energy | mirSVR Score |
MIMAT0004534 | mmu-miR-145* | 330863 | Trim67 | guucuUGUCAUAAAGGUCCUUa | :||| | |||||||| | auauuGCAGCAGAUCCAGGAAa | 2 | 18 | 1893 | 1914 | [mm9:8:127339048-127339065,127340904-127340907:+] | 0.7670 | 157 | 7 | -16.48 | -0.2905 |
MIMAT0000367 | mmu-miR-291a-5p | 330863 | Trim67 | ucucucccggaggUGAAACUAc | |||||||| | caucuguuuaaaaACUUUGAUu | 2 | 10 | 3382 | 3403 | [mm9:8:127353251-127353272:+] | 0.5315 | 145 | 7 | -10.36 | -0.2107 |
MIMAT0004620 | mmu-let-7a* | 330863 | Trim67 | ccuuucugucaucuAACAUAUc | ||||||| | cuuuuuuucuaauuUUGUAUAg | 2 | 9 | 5527 | 5548 | [mm9:8:127358435-127358456:+] | 0.5889 | 140 | 7 | -8.10 | -0.1266 |
MIMAT0004621 | mmu-let-7b* | 330863 | Trim67 | cccuuccgucauccAACAUAUc | ||||||| | cuuuuuuucuaauuUUGUAUAg | 2 | 9 | 5527 | 5548 | [mm9:8:127358435-127358456:+] | 0.5889 | 140 | 7 | -8.22 | -0.1266 |
MIMAT0005439 | mmu-let-7c-2* | 330863 | Trim67 | ccuuucugucaucuAACAUAUc | ||||||| | cuuuuuuucuaauuUUGUAUAg | 2 | 9 | 5527 | 5548 | [mm9:8:127358435-127358456:+] | 0.5889 | 140 | 7 | -8.10 | -0.1266 |
MIMAT0004623 | mmu-let-7f* | 330863 | Trim67 | cccuuccguuaucuAACAUAUc | ||||||| | cuuuuuuucuaauuUUGUAUAg | 2 | 9 | 5527 | 5548 | [mm9:8:127358435-127358456:+] | 0.5889 | 140 | 7 | -9.74 | -0.1241 |
MIMAT0004636 | mmu-miR-93* | 330863 | Trim67 | gccCUUCACGAUCGA-GUCGUCa | || | |||| :| |||||| | ccaGACG-GCUACUUGCAGCAGc | 2 | 20 | 2645 | 2666 | [mm9:8:127349896-127349917:+] | 0.7691 | 125 | 6 | -15.46 | -0.1593 |
MIMAT0000672 | mmu-miR-199b* | 330863 | Trim67 | cuuguccaUCAGAUUUGUGACCc | ||| ||||||||| | uaguuaugAGUAGAAACACUGGa | 2 | 16 | 3823 | 3845 | [mm9:8:127353692-127353714:+] | 0.5484 | 159 | 7 | -17.98 | -0.1151 |
MIMAT0001637 | mmu-miR-452 | 330863 | Trim67 | cagagucAAAGGAGACGUUUGu | ||| :||||||| | uguauuuUUUGAAUUGCAAACa | 2 | 16 | 5564 | 5585 | [mm9:8:127358472-127358493:+] | 0.5889 | 147 | 7 | -12.27 | -0.2179 |
MIMAT0002105 | mmu-miR-464 | 330863 | Trim67 | auaGAGUGUCUUAUUUGAAC-CAu | ||: : |:| ||||||| || | uuaCUUUUUGGA-AAACUUGAGUu | 2 | 21 | 5625 | 5647 | [mm9:8:127358533-127358555:+] | 0.5889 | 122 | 0 | -11.95 | -0.2148 |
MIMAT0003167 | mmu-miR-540-3p | 330863 | Trim67 | gguccuagcUG-GAGACUGGa | || |||||||| | uaaacaaacACACUCUGACCu | 2 | 12 | 2938 | 2958 | [mm9:8:127352049-127352069:+] | 0.7556 | 146 | 7 | -18.08 | -0.1031 |
MIMAT0003189 | mmu-miR-291b-5p | 330863 | Trim67 | ccucucccggaggUGAAACUAg | |||||||| | caucuguuuaaaaACUUUGAUu | 2 | 10 | 3382 | 3403 | [mm9:8:127353251-127353272:+] | 0.5315 | 145 | 7 | -13.69 | -0.2107 |
MIMAT0003897 | mmu-miR-759 | 330863 | Trim67 | caguuuuaacaaacGUGAGACg | ||||||| | gaccuaaacaaacaCACUCUGa | 2 | 9 | 2934 | 2955 | [mm9:8:127352045-127352066:+] | 0.7556 | 140 | 7 | -12.84 | -0.3825 |
MIMAT0003462 | mmu-miR-684 | 330863 | Trim67 | aacUGAACUUCCCUUUUGa | |||| ||||||| | auuACUU-UUUGGAAAACu | 2 | 17 | 5624 | 5641 | [mm9:8:127358532-127358549:+] | 0.5889 | 142 | 7 | -11.29 | -0.2083 |
MIMAT0004888 | mmu-miR-493 | 330863 | Trim67 | ggaccgUGUGUCAUCCUGGAAGu | ||||| | ||||||| | aaacaaACACACUCUGACCUUCu | 2 | 18 | 2939 | 2961 | [mm9:8:127352050-127352072:+] | 0.7556 | 161 | 7 | -18.56 | -0.1592 |
MIMAT0004893 | mmu-miR-574-5p | 330863 | Trim67 | ugugUGAGUGUGUGUGUGUGAGu | || :| ||| |||||||| | cuggACCUAAACAAACACACUCu | 2 | 20 | 2931 | 2953 | [mm9:8:127352042-127352064:+] | 0.7556 | 167 | 7 | -18.96 | -0.1741 |
MIMAT0009398 | mmu-miR-1934 | 330863 | Trim67 | ucucCUGCU-UCGUCCCCUGGUCu | || || :|: |||||||| | agcuGAAGAUGGUUUGGGACCAGa | 2 | 20 | 2026 | 2049 | [mm9:8:127341019-127341026,127342598-127342613:+] | 0.8162 | 154 | 7 | -24.97 | -0.1315 |
MIMAT0009407 | mmu-miR-1942 | 330863 | Trim67 | guuggucuacuuCUGUAGACu | |||||||| | cuuauauuuucuGACAUCUGu | 2 | 10 | 3368 | 3388 | [mm9:8:127353237-127353257:+] | 0.5315 | 145 | 7 | -12.37 | -0.1110 |
MIMAT0011286 | mmu-miR-2182 | 330863 | Trim67 | gcGCCGC-ACCCU-UUAC-ACCGCa | |||:| | | | |||| ||||| | aaCGGUGUUUGUAUAAUGUUGGCGa | 2 | 21 | 5311 | 5335 | [mm9:8:127358219-127358243:+] | 0.5625 | 126 | 0 | -24.73 | -0.2049 |
MIMAT0015644 | mmu-miR-1186b | 330863 | Trim67 | caCCACGUACG-GAAAUU-AGGGu | ||| ||||| || ||| |||| | cuGGUUCAUGCACUGUAACUCCCa | 2 | 21 | 2855 | 2878 | [mm9:8:127350106-127350129:+] | 0.8501 | 139 | 0 | -23.45 | -0.2700 |
MIMAT0000162 | mmu-miR-152 | 330863 | Trim67 | gguUCAAGACAGUACGUGACu | || | |||||||||| | cgcAGCUGGUUCAUGCACUGu | 2 | 19 | 2850 | 2870 | [mm9:8:127350101-127350121:+] | 0.8501 | 158 | 7 | -20.76 | -0.2388 |
MIMAT0000162 | mmu-miR-152 | 330863 | Trim67 | ggUUCAAGACAGUAC-GUGACu | || |||| | || ||||| | auAAAUUCUUU--UGACACUGc | 2 | 20 | 5674 | 5693 | [mm9:8:127358582-127358601:+] | 0.5889 | 120 | 0 | -10.32 | -0.1251 |
MIMAT0000165 | mmu-miR-155 | 330863 | Trim67 | uggggauagUGUUAAUC-GUAAUu | || ||||| ||||| | uugaaagggAC-AUUAGUCAUUAa | 2 | 15 | 3634 | 3656 | [mm9:8:127353503-127353525:+] | 0.5315 | 120 | 0 | -9.11 | -0.1026 |
MIMAT0000215 | mmu-miR-186 | 330863 | Trim67 | ucGGGUUUUCCUCUUAAGAAAc | ::::||| | |||||||| | gaUUUGAAA-UA-AAUUCUUUu | 2 | 21 | 5666 | 5685 | [mm9:8:127358574-127358593:+] | 0.5889 | 148 | 7 | -6.69 | -0.2738 |
MIMAT0000229 | mmu-miR-199a-5p | 330863 | Trim67 | cuuguccaUCAGACUUGUGACCc | ||| |||||||| | uaguuaugAGUAGAAACACUGGa | 2 | 16 | 3823 | 3845 | [mm9:8:127353692-127353714:+] | 0.5484 | 151 | 7 | -16.36 | -0.1151 |
MIMAT0000246 | mmu-miR-122 | 330863 | Trim67 | guuugugguaacagUGUGAGGu | ||||||| | ccuuguuuccucaaACACUCCa | 2 | 9 | 4539 | 4560 | [mm9:8:127354408-127354429:+] | 0.5196 | 140 | 7 | -16.21 | -0.1002 |
MIMAT0000247 | mmu-miR-143 | 330863 | Trim67 | cucgauGUCACGAAGUAGAGu | || | ||||||| | agaaauCAUCUCAUCAUCUCa | 2 | 16 | 4328 | 4348 | [mm9:8:127354197-127354217:+] | 0.5490 | 143 | 7 | -11.75 | -0.1136 |
MIMAT0000381 | mmu-miR-34c | 330863 | Trim67 | cgUUAGUCGAUUGA--UGUGACGGa | ||| | :| :| |||||||| | gaAAUAAAUUCUUUUGACACUGCCa | 2 | 22 | 5671 | 5695 | [mm9:8:127358579-127358603:+] | 0.5889 | 152 | 7 | -15.54 | -0.6777 |
MIMAT0000382 | mmu-miR-34b-5p | 330863 | Trim67 | ugUUAGUCGAUUAA--UGUGACGGa | ||| | :| || |||||||| | gaAAUAAAUUCUUUUGACACUGCCa | 2 | 22 | 5671 | 5695 | [mm9:8:127358579-127358603:+] | 0.5889 | 156 | 7 | -15.54 | -0.6777 |
MIMAT0000385 | mmu-miR-106a | 330863 | Trim67 | gaUGG-ACGUGACAAUCGUGAAAc | ||| | || | ||||||| | gcACCAUUGACGGGCUGCACUUUa | 2 | 22 | 2473 | 2496 | [mm9:8:127348646-127348669:+] | 0.7056 | 148 | 7 | -12.25 | -0.1452 |
MIMAT0000386 | mmu-miR-106b | 330863 | Trim67 | uaGACGUGACAGUCGUGAAAu | :|| || | | ||||||| | caUUG-ACGGGCUGCACUUUa | 2 | 20 | 2477 | 2496 | [mm9:8:127348650-127348669:+] | 0.7056 | 153 | 7 | -14.95 | -0.1452 |
MIMAT0000516 | mmu-miR-148a | 330863 | Trim67 | uguuUCAAGACAUCACGUGACu | || | | ||||||| | ccgcAGCUGGUUCAUGCACUGu | 2 | 19 | 2849 | 2870 | [mm9:8:127350100-127350121:+] | 0.8501 | 142 | 7 | -15.58 | -0.2388 |
MIMAT0000516 | mmu-miR-148a | 330863 | Trim67 | uguUUCAAGACAUCAC-GUGACu | || |||| | || ||||| | aauAAAUUCUUU--UGACACUGc | 2 | 20 | 5673 | 5693 | [mm9:8:127358581-127358601:+] | 0.5889 | 120 | 0 | -10.86 | -0.1251 |
MIMAT0000529 | mmu-miR-20a | 330863 | Trim67 | gaUGG-ACGUGAUAUUCGUGAAAu | ||| | || : ||||||| | gcACCAUUGACGGGCUGCACUUUa | 2 | 22 | 2473 | 2496 | [mm9:8:127348646-127348669:+] | 0.7056 | 144 | 7 | -14.27 | -0.1466 |
MIMAT0000540 | mmu-miR-93 | 330863 | Trim67 | gaUGG-ACGUGCUUGUCGUGAAAc | ||| | |||::| ||||||| | gcACCAUUGACGGGCUGCACUUUa | 2 | 22 | 2473 | 2496 | [mm9:8:127348646-127348669:+] | 0.7056 | 164 | 7 | -21.13 | -0.1438 |
MIMAT0000542 | mmu-miR-34a | 330863 | Trim67 | ugUUGGUCGAUUCUGUGACGGu | || : :| ||||||||| | auAAAUUCUUUUGACACUGCCa | 2 | 21 | 5674 | 5695 | [mm9:8:127358582-127358603:+] | 0.5889 | 152 | 7 | -20.76 | -0.6777 |
MIMAT0000580 | mmu-miR-148b | 330863 | Trim67 | uguuUCAAGACACUACGUGACu | || | | |||||||| | ccgcAGCUGGUUCAUGCACUGu | 2 | 19 | 2849 | 2870 | [mm9:8:127350100-127350121:+] | 0.8501 | 150 | 7 | -17.31 | -0.2388 |
MIMAT0000580 | mmu-miR-148b | 330863 | Trim67 | uguUUCAAGACACUAC-GUGACu | || |||| | || ||||| | aauAAAUUCUUU--UGACACUGc | 2 | 20 | 5673 | 5693 | [mm9:8:127358581-127358601:+] | 0.5889 | 120 | 0 | -11.70 | -0.1251 |
MIMAT0000649 | mmu-miR-17 | 330863 | Trim67 | gaUGG-ACGUGACAUUCGUGAAAc | ||| | || | ||||||| | gcACCAUUGACGGGCUGCACUUUa | 2 | 22 | 2473 | 2496 | [mm9:8:127348646-127348669:+] | 0.7056 | 148 | 7 | -11.97 | -0.1452 |
MIMAT0001091 | mmu-miR-410 | 330863 | Trim67 | uguccGGUAGACACAAUAUAa | | ||| |||||||| | uguaaCAAUC--UGUUAUAUu | 2 | 17 | 3788 | 3806 | [mm9:8:127353657-127353675:+] | 0.5296 | 149 | 7 | -9.41 | -0.1414 |
MIMAT0001542 | mmu-miR-449a | 330863 | Trim67 | uggucgauuguuaUGUGACGGu | |||||||| | auaaauucuuuugACACUGCCa | 2 | 10 | 5674 | 5695 | [mm9:8:127358582-127358603:+] | 0.5889 | 145 | 7 | -16.96 | -0.6815 |
MIMAT0003187 | mmu-miR-20b | 330863 | Trim67 | gaUGG-ACGUGAUACUCGUGAAAc | ||| | || : ||||||| | gcACCAUUGACGGGCUGCACUUUa | 2 | 22 | 2473 | 2496 | [mm9:8:127348646-127348669:+] | 0.7056 | 144 | 7 | -12.15 | -0.1466 |
MIMAT0003460 | mmu-miR-449c | 330863 | Trim67 | ggucgaucguuAC-GUGACGGa | || ||||||| | auaaauucuuuUGACACUGCCa | 2 | 11 | 5674 | 5695 | [mm9:8:127358582-127358603:+] | 0.5889 | 141 | 7 | -12.87 | -0.6815 |
MIMAT0005447 | mmu-miR-449b | 330863 | Trim67 | cggucGAUUGUUGUGACGGa | || ::|||||||| | aaauuCUUUUGACACUGCCa | 2 | 16 | 5676 | 5695 | [mm9:8:127358584-127358603:+] | 0.5889 | 151 | 7 | -16.34 | -0.6777 |