DNA & RNA Element - RepTar |
Gene Name | miRNA | Begin | End | Profile |
Fchsd1 | mmu-miR-3072 | beg:1958 | end:1970 | pic:3' TCTTCCGAAGGACCTCCCCCGT 5'& ||||||||| &5' ------------GGAGGGGGC- 3' |
Fchsd1 | mmu-miR-2141 | beg:116 | end:130 | pic:3' TTGAAAAGACTGTGGAGGA 5'& |||| ||||||| &5' -----TTCT--CACCTCC- 3' |
Fchsd1 | mmu-miR-1927 | beg:1289 | end:1318 | pic:3' AGTCAGGGA--TTGT-AGGTCTCCAG 5'& |||||.|. .| . |||||.|||| &5' TCAGTTCTGCAGAGGTTCCAGGGGTC 3' |
Fchsd1 | mmu-miR-1962 | beg:1401 | end:1421 | pic:3' TACACAGGGTCACG-GTCGGAGA 5'& |.||| | |||||||| &5' ------CTCAGGGAGCAGCCTCT 3' |
Fchsd1 | mmu-miR-3475 | beg:942 | end:961 | pic:3' AAGTTTGGTACACGGAGGTCT 5'& |||| ||| |||||||. &5' TTCAC-CCA----CCTCCAGG 3' |
Fchsd1 | mmu-miR-1982star | beg:176 | end:192 | pic:3' GGAGGGGTCCTGGGAGGGTT 5'& || || |||||||| &5' --TCACC----CCCTCCCA- 3' |
Fchsd1 | mmu-miR-1943 | beg:1772 | end:1792 | pic:3' AGGTCCACGGGTCTA---GGAGGGAA 5'& .|||| |||||||| &5' --------TCCAGTTTAACCTCCCTT 3' |
Fchsd1 | mmu-miR-1931 | beg:274 | end:295 | pic:3' CGGTAGCGTGGTCGGGAACGTA 5'& ||| |.||| |.||.|| || &5' GCC-TTGCA-CGGCTCTGGC-- 3' |
Fchsd1 | mmu-miR-1955 | beg:1837 | end:1855 | pic:3' TTTTCGACGTCACGTAGGACCCTGA 5'& || ||| .||||||| &5' -----CTCCAGG----TCTGGGAC- 3' |
Fchsd1 | mmu-miR-1894-5p | beg:748 | end:765 | pic:3' TCTCCGTCCACCATCCCCTCTC 5'& || |||| ||||||||| &5' -----CA-GTGG-AGGGGAGAG 3' |
Fchsd1 | mmu-miR-3072star | beg:1304 | end:1320 | pic:3' GGACGGGAGGGAGCCCCAGGGA 5'& .||| |||||||| &5' ------TTCCA--GGGGTCCC- 3' |
Fchsd1 | mmu-miR-1952 | beg:129 | end:141 | pic:3' GTCTTCCTCCCACCTCT 5'& ||||||||| &5' --------GGGTGGAGA 3' |
Fchsd1 | mmu-miR-1191 | beg:1653 | end:1675 | pic:3' ATCCCGATGTATCATTCTGAC 5'& ||||| .| | |.|||||| &5' TAGGGAAGCCTTCTGAGACTG 3' |
Fchsd1 | mmu-miR-1196 | beg:988 | end:1010 | pic:3' TCCGTCT-CCGTCCATCTAAA 5'& || .||| |||||| .|.| &5' AGATAGAGGGCAGGAGGGT-- 3' |
Fchsd1 | mmu-miR-1197 | beg:1422 | end:1444 | pic:3' TCTTCATCTGGTACACAGGAT 5'& .| || | || ||||||| &5' GGCAGCTGTCCC--TGTCCTA 3' |
Fchsd1 | mmu-miR-1274a | beg:1196 | end:1212 | pic:3' ACCGCGGACTTGTCCCTGGACT 5'& |||| ||||||| &5' -----CCTGCT----GACCTGA 3' |
Fchsd1 | mmu-miR-1892 | beg:2088 | end:2115 | pic:3' TAGGA----GGGAGGGCAGGGGTTTA 5'& |||| ||| || ||||||..| &5' -TCCTCAAACCCCACCTTCCCCAGGT 3' |
Fchsd1 | mmu-miR-1892 | beg:300 | end:319 | pic:3' TAGGAGGGAGGGCAGGGGTTTA 5'& .||.|||| ||.| ||.| &5' GTCTTCCC-CCTG-CCTC---- 3' |
Fchsd1 | mmu-miR-1896 | beg:1708 | end:1730 | pic:3' GAGGAGTGGGTGGTAGTCTCTC 5'& ||| ||||||. &5' --CCTAGAGGAAATTCAGAGG- 3' |
Fchsd1 | mmu-miR-1903 | beg:1072 | end:1096 | pic:3' ACAGAGT-C-CTTCTTCTTCTTCC 5'& ||| | ||.||.|..||||| &5' ---CTCCTGAGAGGAGGGGGAAGG 3' |
Fchsd1 | mmu-miR-1903 | beg:745 | end:764 | pic:3' ACAGAGTC-CTTCTTCTTCTTCC 5'& ||| ||| |.||..| ||| &5' -GTC-CAGTGGAGGGG-AGA--- 3' |
Fchsd1 | mmu-miR-1904 | beg:723 | end:747 | pic:3' GGAGGGAGGT--CTCCTCGTCTTG 5'& |||||| ||||.|||||.| &5' --TCCCTCAACTGAGGGGCAGAGC 3' |
Fchsd1 | mmu-miR-1904 | beg:2006 | end:2029 | pic:3' GGAGGGAGGTCT-------CCTCGTCTTG 5'& |||| ||||||||| &5' --------CAGAAGGGAAGGGAGCAGAA- 3' |
Fchsd1 | mmu-miR-1906 | beg:1684 | end:1707 | pic:3' TCGGGACGGAGTCC-GACGACGT 5'& ||| ||| | ||||||.| &5' -GCCA--CCTGACCCCTGCTGTA 3' |
Fchsd1 | mmu-miR-1906 | beg:13 | end:37 | pic:3' TCGGGACGGAGTC--CGACGACGT 5'& |||| ||| |||||||. &5' -GCCC-GCCAGTGATGCTGCTGT- 3' |
Fchsd1 | mmu-miR-1930 | beg:742 | end:760 | pic:3' TGCGACGTCCATGATACCTCCA 5'& ||||. | .|||||| &5' --GCTGTC----CAGTGGAGG- 3' |
Fchsd1 | mmu-miR-1937a | beg:146 | end:167 | pic:3' ACCCCCGAGC----AGGCCCTAA 5'& |.|| ||.|||||| &5' -----GTTCCCATTTCTGGGATT 3' |
Fchsd1 | mmu-miR-1937b | beg:1837 | end:1854 | pic:3' ACCCCCGAG---CAGGCCCTA 5'& ||| |||.|||| &5' ------CTCCAGGTCTGGGA- 3' |
Fchsd1 | mmu-miR-1937b | beg:1377 | end:1395 | pic:3' ACCCCCGA-GCA-GGCCCTA 5'& |||| || |.|||| &5' ----GGCTGCGGCCTGGGA- 3' |
Fchsd1 | mmu-miR-1937c | beg:153 | end:166 | pic:3' ACCCCCGAGAAGGCCCTA 5'& .|||.||||| &5' --------TTTCTGGGAT 3' |
Fchsd1 | mmu-miR-1940 | beg:1468 | end:1492 | pic:3' TTGACGAGGTGGAA-GAGT-CAGGAGGTA 5'& || ||| ||| | |||||| &5' -------CCCCCTGGCTCCTGCCCTCCA- 3' |
Fchsd1 | mmu-miR-1941-5p | beg:252 | end:274 | pic:3' TTCGGAGACATGGTCGTAGAGGGA 5'& ..||. | ||| |||||||| &5' GGGCTG--GAACC--CATCTCCC- 3' |
Fchsd1 | mmu-miR-1943 | beg:1847 | end:1871 | pic:3' AGGTCCA--CGGGTCTAGGAGGGAA 5'& | || ||.. ||||.|||| &5' -CTGGGACGGCTTTT-TCCTTCCTT 3' |
Fchsd1 | mmu-miR-1948 | beg:848 | end:868 | pic:3' GACATGCTCACGA-GACGGATTT 5'& .| ||||.| .||||||. &5' ----GC-AGTGTTGTTGCCTAG- 3' |
Fchsd1 | mmu-miR-1950 | beg:394 | end:416 | pic:3' ACTGGTATA-GGAATCTACGTCT 5'& || | || .|||||||| &5' -GAGCTGGAGCCA-GGATGCAGA 3' |
Fchsd1 | mmu-miR-1952 | beg:2006 | end:2028 | pic:3' GTCTTCC--TCCCACCTCT 5'& ||||||| |||| | ||| &5' CAGAAGGGAAGGGAGCAGA 3' |
Fchsd1 | mmu-miR-1952 | beg:1382 | end:1403 | pic:3' GTCT--TCCTCCCACCTCT 5'& |.| .||||||||| |. &5' CGGCCTGGGAGGGTGGCGG 3' |
Fchsd1 | mmu-miR-1954 | beg:1288 | end:1304 | pic:3' TTGTCCCAGAGT-GAGACGTCA 5'& .||| .||||||| &5' --------TTCAGTTCTGCAG- 3' |
Fchsd1 | mmu-miR-1955 | beg:144 | end:167 | pic:3' TTTTCGACGTCACGTAGGACCCTGA 5'& |||. |.||||||.| &5' -----CTGTTCCCATTTCTGGGATT 3' |
Fchsd1 | mmu-miR-1956 | beg:1242 | end:1266 | pic:3' AGGCGACTGA---GTCGGGACCTGA 5'& .||||| |||||||||.|| &5' ----TTGACTAGACAGCCCTGGGCT 3' |
Fchsd1 | mmu-miR-1956 | beg:1164 | end:1188 | pic:3' AGGCGACTGA-GTCGGGACCTGA 5'& |.|| |||||||||.| &5' -CTGCCCAGTGCAGCCCTGGGC- 3' |
Fchsd1 | mmu-miR-1957 | beg:7 | end:27 | pic:3' CAGTATACGAGATGGTGAC 5'& ||||| ||| | ||| || &5' GTCAT-TGC-CCGCCAGTG 3' |
Fchsd1 | mmu-miR-1957 | beg:2068 | end:2086 | pic:3' CAG-TATACGAGATGGTGAC 5'& || ||||||||| .|| &5' -TCAATATGCTCT-TCA--- 3' |
Fchsd1 | mmu-miR-1958 | beg:1783 | end:1796 | pic:3' TGAATGACGAAGGTGAAAGGAT 5'& ||| ||||.|| &5' ----------TCC-CTTTTCT- 3' |
Fchsd1 | mmu-miR-1959 | beg:2103 | end:2127 | pic:3' GAGGTGACTC-GA--TGTAGGGG 5'& ||| | .| || |||||||. &5' -TCC-CCAGGTCTCAACATCCCT 3' |
Fchsd1 | mmu-miR-1960 | beg:869 | end:892 | pic:3' TCGGGAGAAGATTGTCGTGACC 5'& |||.|| |||| .|||.|| &5' AGCTCTGTTCTCCAGGCATTG- 3' |
Fchsd1 | mmu-miR-1961 | beg:301 | end:319 | pic:3' AAGATTGATGATGGAGT 5'& ||| | ||.|||| &5' -TCTTCCCCCTGCCTC- 3' |
Fchsd1 | mmu-miR-1967 | beg:173 | end:201 | pic:3' CGTAGAA---GAGGGGTCCTAGGAGT 5'& ||||| ||||| .|.|||| &5' GCATCACCCCCTCCCATT-GTTCTCA 3' |
Fchsd1 | mmu-miR-1967 | beg:1177 | end:1196 | pic:3' CGTAGAAGAGGGGTCC---TAGGAGT 5'& ||| || .||.||| &5' ---------CCCTGGGCATGTCTTCA 3' |
Fchsd1 | mmu-miR-1967 | beg:2030 | end:2052 | pic:3' CGTAGAAG--AGGGGTCCTAGGAGT 5'& .|||||| |.||| |||| &5' -TATCTTCAATTCCCT---TCCT-- 3' |
Fchsd1 | mmu-miR-1968 | beg:1894 | end:1916 | pic:3' TCAGGTGGTAGGAAT-TGTCGACGT 5'& .|| ||.| .|.|||||| &5' -----GCC-TCTTGCTGCGGCTGCA 3' |
Fchsd1 | mmu-miR-1968 | beg:82 | end:102 | pic:3' TCAGGTGGTAGGAATTGTCGACGT 5'& ||| ||||||| &5' -------CATAGGCAAAAGCTGCA 3' |
Fchsd1 | mmu-miR-1969 | beg:1222 | end:1240 | pic:3' TGGGTACAATTTCAGAGGTAGAA 5'& |||.. | |||||.| &5' ------GTTGGC-TGTCCATTT- 3' |
Fchsd1 | mmu-miR-1970 | beg:71 | end:89 | pic:3' GTTTCGGATAGGGGTCACTGTGT 5'& .||. |||||||.| &5' --------GTCTGGAGTGACATA 3' |
Fchsd1 | mmu-miR-1982.1 | beg:1568 | end:1586 | pic:3' GACACCCTCTTGTATCCCACTCT 5'& .|||. |||||.|| &5' -------GGAATCT-GGGTGGGA 3' |
Fchsd1 | mmu-miR-1982.1 | beg:993 | end:1014 | pic:3' GACACCCTCTTGTA-TCCCACTCT 5'& |||..|| ||||||||| &5' ------GAGGGCAGGAGGGTGAGA 3' |
Fchsd1 | mmu-miR-1982star | beg:261 | end:276 | pic:3' GGAGGGGTCCTGGGAGGGTT 5'& |||| .||||||| &5' ----CCCA----TCTCCCAA 3' |
Fchsd1 | mmu-miR-2132 | beg:1805 | end:1820 | pic:3' GTAGCGCAGTTGTGGGCGG 5'& || ||||.||| &5' -------TCCCCACCTGCC 3' |
Fchsd1 | mmu-miR-2132 | beg:1183 | end:1205 | pic:3' GTAGCG--CAGT--TGTGGGCGG 5'& || ||| |.|||.||. &5' ----GCATGTCTTCATACCTGCT 3' |
Fchsd1 | mmu-miR-2135 | beg:2075 | end:2092 | pic:3' CAAAGCCGGGGT-TCTGGAGA 5'& ||.|. ||||.|| &5' ------GCTCTTCAGACTTC- 3' |
Fchsd1 | mmu-miR-2137 | beg:671 | end:692 | pic:3' GAGGGAC-CCCGAGGG-CGGCCG 5'& .|||| ||||||.| ||||| &5' --TCCTGAGGGCTCTCAGCCGG- 3' |
Fchsd1 | mmu-miR-2140 | beg:1354 | end:1372 | pic:3' TGGTGGTTCTAGACGTGGA 5'& |. ||. |||||||. &5' -CTTCCGT--TCTGCACT- 3' |
Fchsd1 | mmu-miR-2141 | beg:938 | end:958 | pic:3' TTGAAAAGACTGTGGAGGA 5'& || ||| ||||||| &5' -ACAGTTCACCCACCTCC- 3' |
Fchsd1 | mmu-miR-2141 | beg:2098 | end:2108 | pic:3' TTGAAAAGACTGTGGAGGA 5'& |||||.| &5' -----------CACCTTC- 3' |
Fchsd1 | mmu-miR-2145 | beg:469 | end:488 | pic:3' TTGGT-CCGGGCTGGGACGA 5'& |.||| ||||.|. ||| &5' AGCCAGGGCCTGGGCCT--- 3' |
Fchsd1 | mmu-miR-2145 | beg:1839 | end:1859 | pic:3' TTGGTCCGGGCTGGGACGA 5'& |||||.|.|. | ||| &5' --CCAGGTCTGGGACGGCT 3' |
Fchsd1 | mmu-miR-2146 | beg:868 | end:885 | pic:3' GTGTACCTTGGGA--AGAGGTG 5'& |.|.|| |||||| &5' -------AGCTCTGTTCTCCA- 3' |
Fchsd1 | mmu-miR-2146 | beg:688 | end:708 | pic:3' GTGTACCTTGGGA---AGAGGTG 5'& ||.||| |||||| &5' -----GGGACCATGTATCTCCA- 3' |
Fchsd1 | mmu-miR-2146 | beg:254 | end:274 | pic:3' GTGTACCTTGGGAAGAGGTG 5'& .| |||||||| ||||| | &5' -GC-TGGAACCCATCTCC-C 3' |
Fchsd1 | mmu-miR-2182 | beg:1383 | end:1403 | pic:3' GCGCCGCACCCTTTACACCGCA 5'& ||||| |||||.. |||||| &5' -GCGGCCTGGGAGG-GTGGCG- 3' |
Fchsd1 | mmu-miR-2183 | beg:955 | end:975 | pic:3' TCCTCCAGTCCC-CAAGTT 5'& |||| |||||| ||| | &5' AGGAT-TCAGGGAGTTGA- 3' |
Fchsd1 | mmu-miR-2861 | beg:2097 | end:2118 | pic:3' GGCGGGCGGCGGTCCGGGG 5'& || ||. || |||||.|.| &5' CCACCTTCC-CCAGGTCTC 3' |
Fchsd1 | mmu-miR-2861 | beg:298 | end:319 | pic:3' GGCGGGCGGCGGTCCGGGG 5'& |||.|. || || |||.| &5' CCGTCTTCCCCCT-GCCTC 3' |
Fchsd1 | mmu-miR-3072 | beg:491 | end:512 | pic:3' TCTTCCGAAGG-ACC-TCCCCCGT 5'& || ||| ||||||| &5' -----GCCAAGATGGCAGGGGGC- 3' |
Fchsd1 | mmu-miR-3099star | beg:1327 | end:1346 | pic:3' GTTCCCGACCTTCCTTCGACC 5'& |||||| ||.||||| &5' CAAGGGAC-----GAGGCTGG 3' |
Fchsd1 | mmu-miR-3471 | beg:1253 | end:1274 | pic:3' TTACGGAATGTCAACCTAGAGT 5'& ||| |. . ||||.|||| &5' ---GCCCTGGGCTTGGGTCTC- 3' |
Fchsd1 | mmu-miR-3473 | beg:1256 | end:1277 | pic:3' CCGACTCGG---TAGAGAGGT 5'& |||.||. .||||||| &5' --CTGGGCTTGGGTCTCTCC- 3' |
Fchsd1 | mmu-miR-3473 | beg:1829 | end:1845 | pic:3' CCGACTCGGTAGAGAGGT 5'& ||. .|||||||| &5' -----AGTGGTCTCTCCA 3' |
Fchsd1 | mmu-miR-3473 | beg:253 | end:275 | pic:3' CCGACTC--GGTAGAGAGGT 5'& |||||. ||||||| ||| &5' GGCTGGAACCCATCTC-CCA 3' |
Fchsd1 | mmu-miR-3475 | beg:1825 | end:1846 | pic:3' AAGTTTGGTACAC-GGAGGTCT 5'& |||| .|| .||||||. &5' ---AAACAGTGGTCTCTCCAGG 3' |
Fchsd1 | mmu-miR-3475 | beg:689 | end:710 | pic:3' AAGTTTGGTACACGGAGGTCT 5'& ..||||||| ||||||| &5' ---GGACCATGTATCTCCAGA 3' |
Fchsd1 | mmu-miR-3475 | beg:865 | end:886 | pic:3' AAGTTTGGTACACGGAGGTCT 5'& ||||.|. ||| .||||||. &5' -TCAAGCTCTGT-TCTCCAGG 3' |
Fchsd1 | mmu-miR-432 | beg:1828 | end:1847 | pic:3' GACGGGTGACTAGATGAGGTTCT 5'& || ||.||| |||||.| &5' -----CAGTGGTCT-CTCCAGG- 3' |
Fchsd1 | mmu-miR-432 | beg:946 | end:962 | pic:3' GACGGGTGACTAGATGAGGTTCT 5'& ||||| |||||.|| &5' ---CCCAC-------CTCCAGGA 3' |
Fchsd1 | mmu-miR-669h-5p | beg:156 | end:180 | pic:3' CGTGAGTTGATATGTGGGTACGTA 5'& || .. |. |||||||||| &5' ---CTGGGATTTGGACCCATGCAT 3' |
Fchsd1 | mmu-miR-767 | beg:1166 | end:1189 | pic:3' ACGAGTC-TGTTGGTACCACGT 5'& || ||| .||.|| ||| ||| &5' -GCCCAGTGCAGCCCTGG-GCA 3' |
Fchsd1 | mmu-miR-767 | beg:1243 | end:1265 | pic:3' ACGAGTCTGTTGGTACCACGT 5'& || .|||||.|| ||| || &5' TGACTAGACAGCCCTGG-GC- 3' |