DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004523 mmu-miR-29b* 75007 Fam63a auuuggugguauacUUUGGUcg |||||| gagaagaaaaagaaAAACCAca 3 9 478 499 [mm9:3:95087171-95087192:+] 0.6240 120 0 -8.55 -0.1258 MIMAT0000129 mmu-miR-30a* 75007 Fam63a cgacguuuguaGGCUGACUUUc || ||||||| gggacccuggaCCUACUGAAAa 2 12 87 108 [mm9:3:95095577-95095598:+] 0.4851 147 7 -10.86 -0.3157 MIMAT0000154 mmu-miR-142-5p 75007 Fam63a ucaucacgAAAGAU-GAAAUAc |||||| |||||| gguuugagUUUCUAUCUUUAUu 2 14 365 386 [mm9:3:95100018-95100039:+] 0.5948 129 6 -10.24 -1.1887 MIMAT0004535 mmu-miR-150* 75007 Fam63a gauagggGGUCCGGA-CAUGGUc :||| |:| |||||| gccaaggUCAGACUUGGUACCAu 2 16 116 138 [mm9:3:95099769-95099791:+] 0.5916 123 6 -17.56 -0.5012 MIMAT0000218 mmu-miR-24-1* 75007 Fam63a ugACUAU-AGUCGAGUCAUCCGUg ||| | |||:|: ||||||| uuUGAAAGCCAGUUU-GUAGGCAc 2 22 507 529 [mm9:3:95087200-95087222:+] 0.6240 158 7 -23.36 -0.2538 MIMAT0004547 mmu-miR-203* 75007 Fam63a acaacuugacaguucUUGGUGa |||||| gagaagaaaaagaaaAACCACa 2 8 478 499 [mm9:3:95087171-95087192:+] 0.6240 120 6 -9.63 -0.1532 MIMAT0000240 mmu-miR-207 75007 Fam63a cuCCC--UCCUCUCGGUC-CUCUUCg ||| | |||:| ||| |||||| ggGGGAAAAGAGGGACAGAGAGAAGa 2 22 459 484 [mm9:3:95087152-95087177:+] 0.6240 136 6 -30.53 -1.1254 MIMAT0000249 mmu-miR-30e* 75007 Fam63a cgacauuuguaGGCUGACUUUc || ||||||| gggacccuggaCCUACUGAAAa 2 12 87 108 [mm9:3:95095577-95095598:+] 0.4851 147 7 -11.08 -0.3157 MIMAT0000367 mmu-miR-291a-5p 75007 Fam63a ucucucccggaggUGAAACUAc |||||||| accucuuugaggaACUUUGAUg 2 10 844 865 [mm9:3:95087537-95087547,95088507-95088517:+] 0.5594 145 7 -19.49 -0.5284 MIMAT0004573 mmu-miR-293* 75007 Fam63a guuuuacaguguGUCAAACUCa ::||||||| uguuuuaggguuUGGUUUGAGu 2 11 352 373 [mm9:3:95100005-95100026:+] 0.5948 142 7 -11.32 -1.0096 MIMAT0004574 mmu-miR-294* 75007 Fam63a ucuAUCCCGGAGGUAAAACUCa ||||| |::: |||||| uuuUAGGG--UUUGGUUUGAGu 2 20 354 373 [mm9:3:95100007-95100026:+] 0.5948 128 6 -17.80 -0.1007 MIMAT0004575 mmu-miR-295* 75007 Fam63a cuucacacggggugUAAACUCa :|||||| uguuuuaggguuugGUUUGAGu 2 9 352 373 [mm9:3:95100005-95100026:+] 0.5948 124 6 -9.63 -0.1038 MIMAT0004578 mmu-miR-300* 75007 Fam63a ugUUUCCUAUUG--GAGAGA-AGUu :||| | ||| |||||| ||| guGAAGAACAACAUCUCUCUGUCA- 2 21 216 239 [mm9:3:95095706-95095729:+] 0.4909 131 0 -12.33 -1.0703 MIMAT0004616 mmu-miR-30c-1* 75007 Fam63a ccucauuugUUGGGAGAGGGUc |::||||||||| ccagaguugAGUCCUCUCCCAg 2 14 806 827 [mm9:3:95087499-95087520:+] 0.6240 157 7 -30.45 -0.1587 MIMAT0005438 mmu-miR-30c-2* 75007 Fam63a ucucauuugUCGGAAGAGGGUc ||:| ||||||| ccagaguugAGUCCUCUCCCAg 2 14 806 827 [mm9:3:95087499-95087520:+] 0.6240 153 7 -27.05 -0.1572 MIMAT0004626 mmu-miR-18a* 75007 Fam63a gucuuccuCGUGAAUCCCGUCa |::: ||||||| cccuuucuGUGUGAAGGGCAGu 2 15 109 130 [mm9:3:95095599-95095620:+] 0.4870 142 7 -14.82 -0.1830 MIMAT0004626 mmu-miR-18a* 75007 Fam63a gucuuccucgugaaUCCCGUCa ||||||| guccuuguggcugaAGGGCAGu 2 9 41 62 [mm9:3:95095531-95095552:+] 0.4635 140 7 -16.09 -0.3177 MIMAT0004629 mmu-miR-22* 75007 Fam63a auuUCGAACGGUGACUUCUUGa | ||| ::| |||||||| gguACCUUCUUAGUGAAGAACa 2 20 204 225 [mm9:3:95095694-95095715:+] 0.4984 163 7 -15.10 -0.9781 MIMAT0005440 mmu-miR-24-2* 75007 Fam63a ugacaaaGUCGAGUCAUCCGUg |||:|: ||||||| ugaaagcCAGUUU-GUAGGCAc 2 16 509 529 [mm9:3:95087202-95087222:+] 0.6240 153 7 -21.52 -0.2538 MIMAT0004630 mmu-miR-26b* 75007 Fam63a cuCGGUUCAUUACCUCUUGUCc |::::| :|| ||||||| cuGUUGGG-GAU-CAGAACAGa 2 21 88 107 [mm9:3:95099741-95099760:+] 0.5881 144 7 -11.67 -0.7671 MIMAT0004635 mmu-miR-92a* 75007 Fam63a caUUACGGUGGUUA-GGGGUGGa || :| |:::| ||||||| ugAAAAUCUCUGGUGCCCCACCc 2 21 200 222 [mm9:3:95099853-95099875:+] 0.5916 151 7 -19.44 -0.1358 MIMAT0004635 mmu-miR-92a* 75007 Fam63a cauuacGGUGGU-UAGGGGUGGa | || | :|||||||| gccccuCAACGAUGUCCCCACCu 2 17 769 791 [mm9:3:95087462-95087484:+] 0.6240 151 7 -24.89 -0.2962 MIMAT0004643 mmu-miR-331-5p 75007 Fam63a ccUAGGGACCCUG-G-----UA-UGGAUc ||||||| ||| | || ||||| caAUCCCUGAGACACAGAGAAUAACCUAu 2 21 54 82 [mm9:3:95099707-95099735:+] 0.6151 122 0 -21.03 -0.8791 MIMAT0004663 mmu-miR-200c* 75007 Fam63a gguuuguGACGACCCA-UUCUGc :|||| ||| ||||| aggcugcUUGCU-GGUCAAGACa 2 16 258 279 [mm9:3:95099911-95099932:+] 0.5932 121 0 -18.11 -0.3490 MIMAT0004758 mmu-miR-463 75007 Fam63a gaUGGAAUAUAC-CACAGAUAGu :::| :| || || |||||| ggGUUUGGUUUGAGUUUCUAUCu 2 21 359 381 [mm9:3:95100012-95100034:+] 0.5948 127 6 -11.72 -0.2190 MIMAT0002105 mmu-miR-464 75007 Fam63a auagaGUGUCUUAUUUGAACCAu || ||: |:||||||| ggugcCA-AGGUCAGACUUGGUa 2 19 113 134 [mm9:3:95099766-95099787:+] 0.5916 152 7 -17.80 -0.3188 MIMAT0002108 mmu-miR-467a-1* 75007 Fam63a cacaUCCACACACAUA-CAUAUa ||| | | |||| ||||| gucaAGGAG-GAGUAUGGUAUAu 2 19 16 37 [mm9:3:95085783-95085804:+] 0.6247 124 0 -11.86 -0.1115 MIMAT0002110 mmu-miR-469 75007 Fam63a ccuguGGUUCUAGUUACU-UUCUCCGu |: :|: ::||| ||||||| ugcuuCUCGGGGAGGUGAGAAGAGGCa 2 22 94 120 [mm9:3:95086612-95086638:+] 0.4724 152 7 -23.07 -0.1000 MIMAT0003170 mmu-miR-541 75007 Fam63a ucacacUGGUUGUAGUCUUAGGGAa ||| |||| ||||||| gaucccACC-CCAUCUCAAUCCCUg 2 20 39 62 [mm9:3:95099692-95099715:+] 0.6058 157 7 -18.03 -0.2617 MIMAT0003186 mmu-miR-369-3p 75007 Fam63a uuucuAGUUGGUACAUAAUAa || |:| | |||||| gaguuUCUAUC-UUUAUUAUu 2 17 370 389 [mm9:3:95100023-95100042:+] 0.5948 122 6 -6.28 -0.1375 MIMAT0003189 mmu-miR-291b-5p 75007 Fam63a ccucucccggaggUGAAACUAg |||||||| accucuuugaggaACUUUGAUg 2 10 844 865 [mm9:3:95087537-95087547,95088507-95088517:+] 0.5594 145 7 -17.25 -0.5284 MIMAT0005460 mmu-miR-1224 75007 Fam63a gagGUGGAG--GGGUCAGGAGUg || ||| :: ||||||| cagCAGCUCGUGUUUGUCCUCAa 2 19 64 86 [mm9:3:95085831-95085853:+] 0.6068 145 7 -19.15 -0.9746 MIMAT0003733 mmu-miR-665 75007 Fam63a ucccuggagucgGAGGACCa ||||||| ccugccuguuugCUCCUGGg 2 9 308 327 [mm9:3:95099961-95099980:+] 0.5948 140 7 -17.17 -0.1371 MIMAT0003896 mmu-miR-763 75007 Fam63a cggugaccaagaaGGGUCGACc |||||||| cuggaacaccacaCCCAGCUGa 2 10 938 959 [mm9:3:95088590-95088611:+] 0.5000 145 7 -19.83 -0.1993 MIMAT0004823 mmu-miR-666-3p 75007 Fam63a ucGUCCGCUAGUGC-GACGUCGg ||| :||| | | ||||||| ggCAGUUGAUGAGGUCUGCAGCc 2 21 57 79 [mm9:3:95095547-95095569:+] 0.4851 163 7 -29.19 -0.1906 MIMAT0004823 mmu-miR-666-3p 75007 Fam63a ucguccgcuagugcGACGUCGg ||||||| -----------guuCUGCAGCc 2 9 1 11 [mm9:3:95095491-95095501:+] 0.4735 140 7 -16.39 -0.1721 MIMAT0003739 mmu-miR-673-5p 75007 Fam63a gaGGUUCCUGGUCUCGACACUc ||| | :||| ||||||| agCCA--GCUCAG-GCUGUGAc 2 21 14 32 [mm9:3:95099667-95099685:+] 0.5966 151 7 -21.46 -0.1496 MIMAT0003449 mmu-miR-488* 75007 Fam63a aacucucacgauaAUAGACCc ||||||| uggucaagacaccUAUCUGGa 2 9 269 289 [mm9:3:95099922-95099942:+] 0.5948 140 7 -9.56 -0.5417 MIMAT0003452 mmu-miR-678 75007 Fam63a ggaGGUCAGGAACGUGG-CUCUg ||:||:|| |||| |||| uucCCGGUUCU--CACCAGAGAg 2 20 238 258 [mm9:3:95086931-95086951:+] 0.6269 128 0 -24.31 -0.1477 MIMAT0004825 mmu-miR-423-5p 75007 Fam63a uuuCAGAGCGAGAGACGGGGAGu | | | || ||||||| gcuGGCGCAGUCGGCGCCCCUCa 2 21 754 776 [mm9:3:95087447-95087469:+] 0.6240 144 7 -23.75 -0.1590 MIMAT0004825 mmu-miR-423-5p 75007 Fam63a uuucagagcgagagaCGGGGAGu ||||||| ucgguagcugagcagGCCCCUCc 2 9 382 404 [mm9:3:95087075-95087097:+] 0.6240 140 7 -19.05 -0.1413 MIMAT0003459 mmu-miR-682 75007 Fam63a gucugaAGU--GACACUG-ACGUc ||| ||||||| |||| gccagcUCAGGCUGUGACUUGCAg 2 16 15 38 [mm9:3:95099668-95099691:+] 0.5966 126 0 -24.76 -0.1787 MIMAT0003472 mmu-miR-693-5p 75007 Fam63a cuuuugaaagccuACACCGAc ||||||| acugagaaguccuUGUGGCUg 2 9 33 53 [mm9:3:95095523-95095543:+] 0.4635 140 7 -17.89 -0.1244 MIMAT0003490 mmu-miR-700 75007 Fam63a ccACCUGAGCCAAGGGCGCAc || | | |||||||| gaUGUCCCCACCUCCCGCGUa 2 20 779 799 [mm9:3:95087472-95087492:+] 0.6240 147 7 -15.24 -0.6422 MIMAT0003493 mmu-miR-703 75007 Fam63a aagaaaGGAAGACUUCCAAAa ||| ||||||||| uccaagCCU--UGAAGGUUUa 2 16 985 1003 [mm9:3:95088637-95088655:+] 0.5219 152 7 -14.82 -0.6102 MIMAT0003496 mmu-miR-706 75007 Fam63a aaaAAACUC--UG---UCCCAAAGAGa |||||| || : ||||||| cucUUUGAGGAACUUUGAUGUUUCUCu 2 20 846 872 [mm9:3:95087539-95087547,95088507-95088524:+] 0.5331 145 7 -15.80 -0.4140 MIMAT0003500 mmu-miR-710 75007 Fam63a gaguugagagggguUCUGAACc ||||||| uaggugccaaggucAGACUUGg 2 9 111 132 [mm9:3:95099764-95099785:+] 0.5764 140 7 -15.73 -0.1125 MIMAT0003500 mmu-miR-710 75007 Fam63a gaguugagAGGGGUUCUGA-ACc |||: |||||| || cucgggaaUCCUGAAGACUCUGg 2 15 560 582 [mm9:3:95087253-95087275:+] 0.6240 122 0 -24.50 -0.1338 MIMAT0004236 mmu-miR-741 75007 Fam63a agAUGUAUCUUACCGUAGAGAGu ||: |:||| ||||||||| ccUAUCUGGAA-AGCAUCUCUCu 2 22 280 301 [mm9:3:95099933-95099954:+] 0.5948 167 7 -22.19 -0.4325 MIMAT0004236 mmu-miR-741 75007 Fam63a agauguaUCUUACCGUAGAGAGu |||| |||||||| uuagugaAGAACAACAUCUCUCu 2 17 213 235 [mm9:3:95095703-95095725:+] 0.4984 156 7 -15.60 -0.3007 MIMAT0004238 mmu-miR-743a 75007 Fam63a agAUGAGUCGA-ACCACAGAAAg | ||::||| ||||||| cgUCCUUGGCUAAUUUGUCUUUg 2 21 428 450 [mm9:3:95087121-95087143:+] 0.6240 151 7 -12.94 -0.3095 MIMAT0004840 mmu-miR-743b-3p 75007 Fam63a agauaAGUCG-UACUACAGAAAg |::|| | ||||||| cguccUUGGCUAAUUUGUCUUUg 2 18 428 450 [mm9:3:95087121-95087143:+] 0.6240 144 7 -8.57 -0.3122 MIMAT0004845 mmu-miR-881* 75007 Fam63a ucUACACUGACAAUAGAGAGAc || ||: |||||||| cuAUCUGGAAAGCAUCUCUCUu 2 21 281 302 [mm9:3:95099934-95099955:+] 0.5948 148 7 -13.57 -0.4810 MIMAT0004845 mmu-miR-881* 75007 Fam63a ucuACACUGACAAUAG-AGAGAc ||| |||| |||| ||||| ccuUGU-ACUGCUAUCUUCUCUu 2 20 145 166 [mm9:3:95099798-95099819:+] 0.5916 137 0 -15.94 -0.7134 MIMAT0004845 mmu-miR-881* 75007 Fam63a ucUACACUGAC-AAUAGAGAGAc :| || :|| || ||||||| ggGUCUG-UUGUUUUUCUCUCUu 2 21 305 326 [mm9:3:95086998-95087019:+] 0.6240 153 7 -16.92 -0.5010 MIMAT0004845 mmu-miR-881* 75007 Fam63a ucuacacugacaaUAGAGAGAc |||||||| agugaagaacaacAUCUCUCUg 2 10 215 236 [mm9:3:95095705-95095726:+] 0.4984 145 7 -18.99 -0.3572 MIMAT0004845 mmu-miR-881* 75007 Fam63a ucuACACUGACAAUAGAG-AGAc ||||::| | |||| ||| uauUGUGGUUAAUUUCUCAUCUu 2 20 181 203 [mm9:3:95095671-95095693:+] 0.4984 127 0 -12.78 -0.4653 MIMAT0004867 mmu-miR-327 75007 Fam63a uagGAGUACGGGGAGUUCa || | ||:||||||| cagCUGACGCUCCUCAAGg 2 17 953 971 [mm9:3:95088605-95088623:+] 0.5110 160 7 -20.26 -0.1117 MIMAT0004870 mmu-miR-453 75007 Fam63a acGUUCGAGUGAUACUCCGUUGGa |||| | | |||||||| uaCAAGAAGA-AAGCAGGCAACCa 2 23 1002 1024 [mm9:3:95088654-95088676:+] 0.5219 148 7 -19.31 -0.5617 MIMAT0004887 mmu-miR-467d* 75007 Fam63a cacaUCCACACACAUA-CAUAUa ||| | | |||| ||||| gucaAGGAG-GAGUAUGGUAUAu 2 19 16 37 [mm9:3:95085783-95085804:+] 0.6247 124 0 -11.86 -0.1115 MIMAT0004891 mmu-miR-509-3p 75007 Fam63a gguaAUGUCUUUACAG-UUAGu | |||::| ||| |||| ggcaUCCAGGGAGGUCUAAUCa 2 18 166 187 [mm9:3:95086859-95086880:+] 0.5819 125 0 -16.38 -0.1105 MIMAT0005294 mmu-miR-467e* 75007 Fam63a uauaUCCACACACAUA-CAUAUa ||| | | |||| ||||| gucaAGGAG-GAGUAUGGUAUAu 2 19 16 37 [mm9:3:95085783-95085804:+] 0.6247 124 0 -11.86 -0.1115 MIMAT0005838 mmu-miR-669j 75007 Fam63a acaaacguacacucAUAUACGu ||||||| cacagagaauaaccUAUAUGCa 2 9 66 87 [mm9:3:95099719-95099740:+] 0.6151 140 7 -9.64 -0.7522 MIMAT0005839 mmu-miR-669f 75007 Fam63a uaugcacacaCACAUA-CAUAUAc | |||| |||||| cgucaaggagGAGUAUGGUAUAUc 2 14 15 38 [mm9:3:95085782-95085805:+] 0.6247 121 6 -8.25 -0.1773 MIMAT0005840 mmu-miR-669i 75007 Fam63a cauacguacacacAUAUACGu ||||||| acagagaauaaccUAUAUGCa 2 9 67 87 [mm9:3:95099720-95099740:+] 0.6151 140 7 -7.79 -0.7522 MIMAT0005859 mmu-miR-1198 75007 Fam63a gguucGGUCGGUCCUUG-UGUAu ::||: | |||| |||| ccuucUUAGUGAAGAACAACAUc 2 18 208 230 [mm9:3:95095698-95095720:+] 0.4984 121 0 -12.10 -0.2622 MIMAT0007867 mmu-miR-1895 75007 Fam63a aggAGGAGCAGGAGGAGCCCCc || || | ||:||||||| aaaUCGUCCUGCUUCUCGGGGa 2 20 85 106 [mm9:3:95085852-95085853,95086605-95086624:+] 0.5420 167 7 -29.46 -0.4149 MIMAT0009392 mmu-miR-1929 75007 Fam63a gagACGAGAUAUUUCAGGAUCUu | :|: ||: ||||||| uuaUUUUUAAUGCCUUCCUAGAg 2 21 385 407 [mm9:3:95100038-95100060:+] 0.5948 148 7 -13.68 -0.8408 MIMAT0009394 mmu-miR-1931 75007 Fam63a cgguagcgugGUCGGGAACGUa ||| ||||||| ----guucugCAG-CCUUGCAa 2 13 1 17 [mm9:3:95095491-95095507:+] 0.4735 146 7 -14.71 -0.7309 MIMAT0009399 mmu-miR-1935 75007 Fam63a ucUCUAGGCGGUCGGAGACGGa |||| |||| |:||||||| ccAGAUACGCCUGUCUCUGCCc 2 21 1022 1043 [mm9:3:95088674-95088695:+] 0.5110 180 7 -30.94 -0.1928 MIMAT0009399 mmu-miR-1935 75007 Fam63a ucuCUAGGCGGUCGGAGACGGa | ||| ||:| ||||||| ccuGCUCCUCCGGGCUCUGCCa 2 20 204 225 [mm9:3:95086897-95086918:+] 0.6298 167 7 -25.74 -0.1014 MIMAT0009402 mmu-miR-1938 75007 Fam63a cugGCUUGAUGUUC-AGGGUGGc :|| :|:||:| ||||||| cugUGACUUGCAGGAUCCCACCc 2 20 26 48 [mm9:3:95099679-95099701:+] 0.6058 162 7 -24.84 -0.5017 MIMAT0009416 mmu-miR-1949 75007 Fam63a uugauacgacuguaggACCAUAUc ||||||| acgucaaggaggaguaUGGUAUAu 2 9 14 37 [mm9:3:95085781-95085804:+] 0.6247 140 7 -10.17 -0.3939 MIMAT0009425 mmu-miR-1954 75007 Fam63a uugucccagagUGAGACGUCa ::||||||| -----------GUUCUGCAGc 2 11 1 10 [mm9:3:95095491-95095500:+] 0.4735 142 7 -12.34 -0.1192 MIMAT0009428 mmu-miR-1956 75007 Fam63a aggcgacugagucGGGACCUGa |||||||| ccguccaaggggaCCCUGGACc 2 10 78 99 [mm9:3:95095568-95095589:+] 0.4851 145 7 -24.33 -0.1316 MIMAT0009431 mmu-miR-1958 75007 Fam63a ugaAUGACGA-AGGUGA-AAGGAu ||||||| ||: || ||||| uugUACUGCUAUCUUCUCUUCCUc 2 20 147 170 [mm9:3:95099800-95099823:+] 0.5916 138 0 -18.02 -0.6907 MIMAT0009431 mmu-miR-1958 75007 Fam63a ugaAUGAC-GAAGGUGA-AAGGAu |::|| :||:| || ||||| gucUGUUGUUUUUCUCUCUUCCUu 2 20 307 330 [mm9:3:95087000-95087023:+] 0.6240 126 0 -13.58 -0.2929 MIMAT0009434 mmu-miR-1961 75007 Fam63a aagauugauGAUGGAGu ||||||| gaaccucauCUACCUCu 2 9 833 849 [mm9:3:95087526-95087542:+] 0.6240 140 7 -11.42 -0.8103 MIMAT0009436 mmu-miR-1963 75007 Fam63a cuUCCGGAGUACUAGA-GCAGGGu ||| | || | || |||||| agAGG-CACACGCGCUCCGUCCCu 2 22 255 277 [mm9:3:95086948-95086970:+] 0.6240 123 6 -22.92 -0.1858 MIMAT0009442 mmu-miR-1969 75007 Fam63a ugGGUACAAUUUCAGAG-GUAGAa :::|| | || |:|| ||||| uaUUGUGGUUAA-UUUCUCAUCUu 2 22 181 203 [mm9:3:95095671-95095693:+] 0.4984 123 0 -13.61 -0.4520 MIMAT0009456 mmu-miR-1839-5p 75007 Fam63a guucuggacaaGA-UAGAUGGAa || |||||||| agugccggaacCUCAUCUACCUc 2 12 826 848 [mm9:3:95087519-95087541:+] 0.6240 146 7 -17.94 -0.5626 MIMAT0011221 mmu-miR-2145 75007 Fam63a uugguccgGGCUGGGACGa | |||||||| cuaccccaCAGACCCUGCc 2 12 328 346 [mm9:3:95099981-95099999:+] 0.5948 147 7 -20.95 -0.2411 MIMAT0012771 mmu-miR-432 75007 Fam63a gaCGGGUGACUAGAUGAGGUUCu |||: :| || ||||||| agGCCUUUUCAUAGUCUCCAAGc 2 22 969 991 [mm9:3:95088621-95088643:+] 0.5219 157 7 -18.50 -0.3218 MIMAT0012773 mmu-miR-767 75007 Fam63a acgAGUC-UGU-UGGUA-CCACGu |||| ||| || || ||||| ggaUCAGAACAGACAAUAGGUGCc 2 19 95 118 [mm9:3:95099748-95099771:+] 0.5893 128 0 -19.80 -0.4712 MIMAT0013803 mmu-miR-2861 75007 Fam63a ggcgggCGGC-GGUCCGGGg ||:| ||||||| ucgguaGCUGAGCAGGCCCc 2 14 382 401 [mm9:3:95087075-95087094:+] 0.6240 144 7 -29.39 -0.1254 MIMAT0000121 mmu-let-7g 75007 Fam63a uuGACAUG---UUUGA-U-GAUGGAGu | ||:| || || | ||||||| ccCAGUGCCGGAACCUCAUCUACCUCu 2 21 823 849 [mm9:3:95087516-95087542:+] 0.6240 145 7 -15.25 -0.8139 MIMAT0000122 mmu-let-7i 75007 Fam63a uuGUCGUG---UUUGA-U-GAUGGAGu |||::| || || | ||||||| ccCAGUGCCGGAACCUCAUCUACCUCu 2 21 823 849 [mm9:3:95087516-95087542:+] 0.6240 149 7 -16.07 -0.8139 MIMAT0000134 mmu-miR-124 75007 Fam63a ccguaaguggcgcACGGAAu |||||| uuauuauuuuuaaUGCCUUc 2 8 382 401 [mm9:3:95100035-95100054:+] 0.5948 120 6 -7.86 -0.1482 MIMAT0000151 mmu-miR-140 75007 Fam63a gauggUAUCCCAUUUUGGUGac | | | |||||||| agaagAAAAAGAAAAACCACaa 3 18 479 500 [mm9:3:95087172-95087193:+] 0.6240 133 0 -10.39 -0.1104 MIMAT0000162 mmu-miR-152 75007 Fam63a gguucaaGACAGUACGUGACu || | |||||||| gaauaacCUAU-AUGCACUGu 2 15 72 91 [mm9:3:95099725-95099744:+] 0.6151 148 7 -14.17 -0.9302 MIMAT0000164 mmu-miR-154 75007 Fam63a gcUUCCGUUGUGCCUAUUGGAu :|| || : | ||||||| cuGAGACACAGAGAAUAACCUa 2 21 60 81 [mm9:3:95099713-95099734:+] 0.6151 152 7 -15.54 -1.1008 MIMAT0000366 mmu-miR-290-5p 75007 Fam63a uuucacggggguAUCAAACUCa |:||||||| uguuuuaggguuUGGUUUGAGu 2 11 352 373 [mm9:3:95100005-95100026:+] 0.5948 146 7 -14.05 -1.0182 MIMAT0000369 mmu-miR-292-5p 75007 Fam63a guuuucUCGGGGGUCAAACUCa || ::::||||||| uguuuuAGGGUUUGGUUUGAGu 2 17 352 373 [mm9:3:95100005-95100026:+] 0.5948 148 7 -16.42 -1.0096 MIMAT0004576 mmu-miR-296-3p 75007 Fam63a ccuCUCGGAGGUGGGU-UGGGAg |:||: || | || ||||| ccuGGGCUACCCCACAGACCCUg 2 20 322 344 [mm9:3:95099975-95099997:+] 0.5948 127 0 -21.54 -0.2531 MIMAT0000379 mmu-miR-301a 75007 Fam63a cgaaaCUGUUAU--GAUA-ACGUGAc || |||| |||| |||||| acacaGAGAAUAACCUAUAUGCACUg 2 19 65 90 [mm9:3:95099718-95099743:+] 0.6151 133 6 -18.32 -0.8035 MIMAT0000383 mmu-let-7d 75007 Fam63a uugauaCGUUGGA-U-GAUGGAGa | ||||| | ||||||| agugccGGAACCUCAUCUACCUCu 2 17 826 849 [mm9:3:95087519-95087542:+] 0.6240 154 7 -22.11 -0.8103 MIMAT0000516 mmu-miR-148a 75007 Fam63a uguuucaaGACAUCACGUGACu || || ||||||| agaauaacCUAUA-UGCACUGu 2 15 71 91 [mm9:3:95099724-95099744:+] 0.6151 148 7 -12.72 -0.9047 MIMAT0000521 mmu-let-7a 75007 Fam63a uugauaugUUGGA-U-GAUGGAGu ||||| | ||||||| agugccggAACCUCAUCUACCUCu 2 15 826 849 [mm9:3:95087519-95087542:+] 0.6240 152 7 -18.31 -0.8103 MIMAT0000522 mmu-let-7b 75007 Fam63a uugguGUGUUGGA-U-GAUGGAGu |: ||||| | ||||||| agugcCGGAACCUCAUCUACCUCu 2 18 826 849 [mm9:3:95087519-95087542:+] 0.6240 155 7 -21.91 -0.8103 MIMAT0000523 mmu-let-7c 75007 Fam63a uugguaugUUGGA-U-GAUGGAGu ||||| | ||||||| agugccggAACCUCAUCUACCUCu 2 15 826 849 [mm9:3:95087519-95087542:+] 0.6240 152 7 -22.59 -0.8103 MIMAT0000524 mmu-let-7e 75007 Fam63a uugauaugUUGGAG--GAUGGAGu |||||| ||||||| agugccggAACCUCAUCUACCUCu 2 15 826 849 [mm9:3:95087519-95087542:+] 0.6240 157 7 -20.21 -0.8103 MIMAT0000525 mmu-let-7f 75007 Fam63a uugauauguuAGAUGAUGGAGu || ||||||| ugccggaaccUCAUCUACCUCu 2 13 828 849 [mm9:3:95087521-95087542:+] 0.6240 144 7 -11.56 -0.8139 MIMAT0000538 mmu-miR-31 75007 Fam63a gucGAUACGGUCGUAG-AACGGa || || :| |||| ||||| agaCU-UGGUACCAUCUUUGCCc 2 20 125 146 [mm9:3:95099778-95099799:+] 0.5916 125 0 -15.90 -0.7061 MIMAT0000541 mmu-miR-96 75007 Fam63a ucGUUUU-UACACGAU-CACGGUUu ||:|| | || ||||||| auCAGAACAGACAAUAGGUGCCAAg 2 22 97 121 [mm9:3:95099750-95099774:+] 0.5893 143 7 -14.68 -0.3897 MIMAT0000545 mmu-miR-98 75007 Fam63a uuGUUAUG---UU-GAAU-GAUGGAGu ||:|:| || || | ||||||| ccCAGUGCCGGAACCUCAUCUACCUCu 2 21 823 849 [mm9:3:95087516-95087542:+] 0.6240 149 7 -16.49 -0.8103 MIMAT0000580 mmu-miR-148b 75007 Fam63a uguuucaaGACACUACGUGACu || | |||||||| agaauaacCUAU-AUGCACUGu 2 15 71 91 [mm9:3:95099724-95099744:+] 0.6151 148 7 -13.61 -0.9302 MIMAT0004651 mmu-miR-340-5p 75007 Fam63a uuAGUCAGAGUAACGAAAUAuu | |||:|| | |||||| uuUGAGUUUC-UAUCUUUAUua 3 21 367 387 [mm9:3:95100020-95100040:+] 0.5948 138 0 -10.41 -0.3041 MIMAT0000741 mmu-miR-377 75007 Fam63a ugUUUUCAACGGAAACACACUa :||| ::| ||||||| cuGAAAACCCUUUCUGUGUGAa 2 21 102 123 [mm9:3:95095592-95095613:+] 0.4851 148 7 -12.94 -0.3753 MIMAT0003151 mmu-miR-378 75007 Fam63a ggaagacugagguUCAGGUCa ||||||| uccugggaaauguAGUCCAGc 2 9 47 67 [mm9:3:95085814-95085834:+] 0.6247 140 7 -18.53 -0.2695 MIMAT0001533 mmu-miR-448 75007 Fam63a uacCCUGUAGGAUGUAUACGUu | |:| ||| ||||||| agaGAAUAACCU--AUAUGCAc 2 20 69 88 [mm9:3:95099722-95099741:+] 0.6151 152 7 -9.96 -0.6571 MIMAT0003169 mmu-miR-539 75007 Fam63a uguGUGGUUCCUAUUAAAGAGg :|::: || ||||||||| aguUAUUGUGGUUAAUUUCUCa 2 20 178 199 [mm9:3:95095668-95095689:+] 0.4984 163 7 -14.71 -0.8193 MIMAT0003182 mmu-miR-494 75007 Fam63a cuccaaagGGCACAUACAAAGu |: || ||||||| uugaggaaCUUUG-AUGUUUCu 2 15 850 870 [mm9:3:95087543-95087547,95088507-95088522:+] 0.5594 144 7 -14.46 -0.1779 MIMAT0004186 mmu-miR-301b 75007 Fam63a cgaaaCUGUUAU--GGUA-ACGUGAc || |||| |:|| |||||| acacaGAGAAUAACCUAUAUGCACUg 2 19 65 90 [mm9:3:95099718-95099743:+] 0.6151 129 6 -18.43 -0.8035 MIMAT0003727 mmu-miR-374 75007 Fam63a gugAAUCGUCCAACAUAAUAua || :| || |||||| gagUUUCUAUCUU-UAUUAUuu 3 20 370 390 [mm9:3:95100023-95100043:+] 0.5948 125 0 -1.08 -0.1184 MIMAT0003453 mmu-miR-497 75007 Fam63a auGUUUGGUGUCACACG-ACGAc :::||| ||| ||| |||| caUGGACC-CAGGCUGCUUGCUg 2 21 249 270 [mm9:3:95099902-95099923:+] 0.5932 122 0 -21.66 -0.2915 MIMAT0003486 mmu-miR-491 75007 Fam63a ggaguaccUUCCCA-AGGGGUGa || | | ||||||| cgccccucAACGAUGUCCCCACc 2 15 768 790 [mm9:3:95087461-95087483:+] 0.6240 145 7 -21.53 -0.1761 MIMAT0003780 mmu-miR-490 75007 Fam63a guCGUACCUCAGGAGGUC-CAAc ||:| || || |||| ||| ccGCGUAGA-ACCGCCAGAGUUg 2 21 793 814 [mm9:3:95087486-95087507:+] 0.6240 122 0 -19.63 -0.1220 MIMAT0003783 mmu-miR-615-3p 75007 Fam63a uuCUC-CCUCUGG-GUCCGAGCCu ||| | | :|| |||||||| ugGAGCGCACGCCGGAGGCUCGGu 2 21 534 557 [mm9:3:95087227-95087250:+] 0.6240 154 7 -24.83 -0.1286 MIMAT0004855 mmu-miR-876-3p 75007 Fam63a acuuaaugaaacaUUUGGUGau ||||||| agaagaaaaagaaAAACCACaa 3 10 479 500 [mm9:3:95087172-95087193:+] 0.6240 125 0 -9.33 -0.1137

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G062557 Fam63a Mus musculus 75007

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Fam63a RAID00158484 mmu-miR-340-5p miRNA MIMAT0004651 Fam63a mRNA 75007 Prediction 0.1828 Fam63a RAID00175341 mmu-let-7f-5p miRNA MIMAT0000525 Fam63a mRNA 75007 Prediction 0.1828 Fam63a RAID00232547 mmu-miR-490-3p miRNA MIMAT0003780 Fam63a mRNA 75007 Prediction 0.1828 Fam63a RAID00251940 mmu-let-7g-5p miRNA MIMAT0000121 Fam63a mRNA 75007 Prediction 0.1828 Fam63a RAID00466224 mmu-miR-148b-3p miRNA MIMAT0000580 Fam63a mRNA 75007 Prediction 0.1828 Fam63a RAID00493930 mmu-miR-494-3p miRNA MIMAT0003182 Fam63a mRNA 75007 Prediction 0.1828 Fam63a RAID00637785 mmu-miR-301b-3p miRNA MIMAT0004186 Fam63a mRNA 75007 Prediction 0.1828 Fam63a RAID00744369 mmu-miR-301a-3p miRNA MIMAT0000379 Fam63a mRNA 75007 Prediction 0.1828 Fam63a RAID00814898 mmu-miR-377-3p miRNA MIMAT0000741 Fam63a mRNA 75007 Prediction 0.1828 Fam63a RAID00982754 mmu-miR-152-3p miRNA MIMAT0000162 Fam63a mRNA 75007 Prediction 0.1828 Fam63a RAID01051319 mmu-miR-374b-5p miRNA MIMAT0003727 Fam63a mRNA 75007 Prediction 0.1828 Fam63a RAID01135715 mmu-miR-491-5p miRNA MIMAT0003486 Fam63a mRNA 75007 Prediction 0.1828 Fam63a RAID01237963 mmu-let-7b-5p miRNA MIMAT0000522 Fam63a mRNA 75007 Prediction 0.1828 Fam63a RAID01335586 mmu-miR-96-5p miRNA MIMAT0000541 Fam63a mRNA 75007 Prediction 0.1828 Fam63a RAID01345943 mmu-miR-290a-5p miRNA MIMAT0000366 Fam63a mRNA 75007 Prediction 0.1828 Fam63a RAID01398913 mmu-miR-296-3p miRNA MIMAT0004576 Fam63a mRNA 75007 Prediction 0.1828 Fam63a RAID01428779 mmu-miR-6931-5p miRNA MIMAT0027762 Fam63a mRNA 75007 Prediction 0.1828 Fam63a RAID01452094 mmu-miR-7116-3p miRNA MIMAT0028130 Fam63a mRNA 75007 Prediction 0.1828 Fam63a RAID01487936 mmu-let-7d-5p miRNA MIMAT0000383 Fam63a mRNA 75007 Prediction 0.1828 Fam63a RAID01526739 mmu-miR-1958 miRNA MIMAT0009431 Fam63a mRNA 75007 Prediction 0.1828 Fam63a RAID01565701 mmu-miR-6951-3p miRNA MIMAT0027803 Fam63a mRNA 75007 Prediction 0.1828 Fam63a RAID01659365 mmu-miR-448-3p miRNA MIMAT0001533 Fam63a mRNA 75007 Prediction 0.1828 Fam63a RAID01711166 mmu-miR-378a-3p miRNA MIMAT0003151 Fam63a mRNA 75007 Prediction 0.1828 Fam63a RAID01713426 mmu-miR-154-5p miRNA MIMAT0000164 Fam63a mRNA 75007 Prediction 0.1828 Fam63a RAID01792602 mmu-miR-652-5p miRNA MIMAT0017260 Fam63a mRNA 75007 Prediction 0.1828 Fam63a RAID02186641 mmu-miR-7001-5p miRNA MIMAT0027904 Fam63a mRNA 75007 Prediction 0.1828 Fam63a RAID02276266 mmu-miR-6925-5p miRNA MIMAT0027750 Fam63a mRNA 75007 Prediction 0.1828 Fam63a RAID02315036 mmu-let-7e-5p miRNA MIMAT0000524 Fam63a mRNA 75007 Prediction 0.1828 Fam63a RAID02328623 mmu-miR-31-5p miRNA MIMAT0000538 Fam63a mRNA 75007 Prediction 0.1828 Fam63a RAID02423725 mmu-miR-98-5p miRNA MIMAT0000545 Fam63a mRNA 75007 Prediction 0.1828 Fam63a RAID02424415 mmu-miR-497a-5p miRNA MIMAT0003453 Fam63a mRNA 75007 Prediction 0.1828 Fam63a RAID02430874 mmu-miR-292a-5p miRNA MIMAT0000369 Fam63a mRNA 75007 Prediction 0.1828 Fam63a RAID02579816 mmu-miR-876-3p miRNA MIMAT0004855 Fam63a mRNA 75007 Prediction 0.1828 Fam63a RAID02935024 mmu-miR-6999-5p miRNA MIMAT0027900 Fam63a mRNA 75007 Prediction 0.1828 Fam63a RAID03086120 mmu-miR-346-3p miRNA MIMAT0017039 Fam63a mRNA 75007 Prediction 0.1828 Fam63a RAID03124888 mmu-miR-148a-3p miRNA MIMAT0000516 Fam63a mRNA 75007 Prediction 0.1828 Fam63a RAID03172269 mmu-let-7c-5p miRNA MIMAT0000523 Fam63a mRNA 75007 Prediction 0.1828 Fam63a RAID03191156 mmu-miR-7054-5p miRNA MIMAT0028012 Fam63a mRNA 75007 Prediction 0.1828 Fam63a RAID03294268 mmu-miR-615-3p miRNA MIMAT0003783 Fam63a mRNA 75007 Prediction 0.1828 Fam63a RAID03309668 mmu-miR-212-5p miRNA MIMAT0017053 Fam63a mRNA 75007 Prediction 0.1828 Fam63a RAID03361164 mmu-let-7a-5p miRNA MIMAT0000521 Fam63a mRNA 75007 Prediction 0.1828 Fam63a RAID03478403 mmu-let-7i-5p miRNA MIMAT0000122 Fam63a mRNA 75007 Prediction 0.1828 Fam63a RAID03562719 mmu-miR-539-5p miRNA MIMAT0003169 Fam63a mRNA 75007 Prediction 0.1828 Fam63a RAID03745942 mmu-miR-140-5p miRNA MIMAT0000151 Fam63a mRNA 75007 Prediction 0.1828 Fam63a RAID03790350 mmu-miR-124-3p miRNA MIMAT0000134 Fam63a mRNA 75007 Prediction 0.1828