DNA & RNA Element - AREsite Gene Name Motif CDS Area ARE Area Evidence Ambra1; Kiaa1736 ATTTA 122-3664 4015-4019

DNA & RNA Element - circBase circRNA ID Chrom Start End Strand mmu_circ_0001046 chr2 91645180 91665509 +

DNA & RNA Element - miRTarBase Target Gene (Entrez ID) miRTarBase ID miRNA Species (miRNA) Target Gene Species (Target Gene) Experiments Support Type References (PMID) MIRT015321 mmu-miR-9-5p Mus musculus Ambra1 228361 Mus musculus Sequencing Functional MTI (Weak) 19536157

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000143 mmu-miR-9* 228361 Ambra1 ugaAAGCCAAUA-GAUCGAA-AUa || ||| | ||||||| || aaaUUGAGUUUUCCUAGCUUGUAu 2 20 677 700 [mm9:2:91651047-91651070:+] 0.5760 126 0 -12.38 -0.8283 MIMAT0004534 mmu-miR-145* 228361 Ambra1 guucuugucauaaAGGUCCUUa |||||||| gcugaugccugcaUCCAGGAAc 2 10 87 108 [mm9:2:91758067-91758088:+] 0.6038 145 7 -12.39 -0.3470 MIMAT0004537 mmu-miR-154* 228361 Ambra1 uuaUCCAGUUGGCA--CAUA-CUAa || |: |:||| |||| ||| uuaAGUUUCAUCGUAAGUAUAGAUu 2 20 337 361 [mm9:2:91650707-91650731:+] 0.4953 122 0 -10.96 -0.5610 MIMAT0004537 mmu-miR-154* 228361 Ambra1 uuauccaguuggcaCAUACUaa |||||| ucauuuuguuuuuaGUAUGAaa 3 9 881 902 [mm9:2:91758861-91758882:+] 0.6898 120 0 -7.09 -0.2786 MIMAT0004542 mmu-miR-191* 228361 Ambra1 cccuugcuuUAGGUUCACGUCg ||::| |||||| uaaguuauuAUUUAUGUGCAGc 2 14 101 122 [mm9:2:91650471-91650492:+] 0.5694 125 6 -14.30 -0.1042 MIMAT0004547 mmu-miR-203* 228361 Ambra1 acAACUUGACAGUUCUUGGUGa | ||:| ||||||||| ucUAGAGCCCAGAAGAACCACa 2 21 199 220 [mm9:2:91758179-91758200:+] 0.5520 156 7 -16.91 -0.5956 MIMAT0004574 mmu-miR-294* 228361 Ambra1 ucuAUCCCGGAGGUAAAACUca | | ::| :||||||| guuUUGAUUUUGUAUUUUGAca 3 20 722 743 [mm9:2:91651092-91651113:+] 0.5760 131 0 -7.25 -0.2750 MIMAT0004575 mmu-miR-295* 228361 Ambra1 cuucacACGGGGUG-UAAACUCa || :|::: ||||||| aggucuUGGUCUGUGAUUUGAGg 2 17 798 820 [mm9:2:91758778-91758800:+] 0.6822 147 7 -13.93 -0.3884 MIMAT0004616 mmu-miR-30c-1* 228361 Ambra1 ccucauuuguuGGGAGAGGGUc |::||||||| uuugcuuccuuCUUUCUCCCAg 2 12 13 34 [mm9:2:91650383-91650404:+] 0.5168 147 7 -20.58 -0.1253 MIMAT0005438 mmu-miR-30c-2* 228361 Ambra1 ucucauuugucGGAAGAGGGUc |:|||||||| uuugcuuccuuCUUUCUCCCAg 2 12 13 34 [mm9:2:91650383-91650404:+] 0.5168 151 7 -21.09 -0.1253 MIMAT0004625 mmu-miR-16* 228361 Ambra1 agucGUCGUG--UCAGUUAUG-ACc ||| |: ||||||||| || gacaCAGAAUGGAGUCAAUACAUGg 2 19 602 626 [mm9:2:91758582-91758606:+] 0.5726 129 0 -22.98 -0.2642 MIMAT0004629 mmu-miR-22* 228361 Ambra1 auuucgaaCGGUGACUUCUUGa ||| | ||||||| gaucuagaGCC-CAGAAGAACc 2 15 197 217 [mm9:2:91758177-91758197:+] 0.5520 148 7 -14.79 -0.2482 MIMAT0004633 mmu-miR-27a* 228361 Ambra1 acGAGUGUUCGUCGAU-UCGGGa ||: || | | ||| ||||| gcCUUCCAUG-AUCUAGAGCCCa 2 21 188 209 [mm9:2:91758168-91758189:+] 0.5609 122 0 -12.47 -0.4125 MIMAT0004635 mmu-miR-92a* 228361 Ambra1 cauuACGGUGGUUAGGGGUGGa |||: || | ||||||| uuccUGCU-CCUAGCCCCACCu 2 19 404 424 [mm9:2:91650774-91650794:+] 0.4459 156 7 -24.60 -0.1871 MIMAT0000578 mmu-miR-337-3p 228361 Ambra1 uccGUAGUAUAUCCUCGACUu || || | | ||||||| guaCA-CACAGAAGAGCUGAu 2 19 73 92 [mm9:2:91758053-91758072:+] 0.6038 152 7 -12.42 -0.4684 MIMAT0004656 mmu-miR-345-3p 228361 Ambra1 cagaGGUCUGGGGAUCAA-GUCc |||| |||| |||| ||| agggCCAG-CCCCAAGUUCCAGa 2 19 568 589 [mm9:2:91650938-91650959:+] 0.5415 132 0 -24.39 -0.3563 MIMAT0004656 mmu-miR-345-3p 228361 Ambra1 caGAGGUCUGG--GG-AUCAA-GUCc |||:| ||| || |||| ||| auCUCUAAACCUUCCAGAGUUCCAGc 2 21 461 486 [mm9:2:91758441-91758466:+] 0.5536 122 0 -19.52 -0.3987 MIMAT0004666 mmu-miR-33* 228361 Ambra1 cacuacGUGACACCUUUGUAAc ||: | |||||||| gucacuCAUCAUAGAAACAUUg 2 17 923 944 [mm9:2:91758903-91758924:+] 0.6898 152 7 -14.01 -0.4584 MIMAT0004670 mmu-miR-7a* 228361 Ambra1 auaccgucugacacuAAACAAc |||||| caaggcucugaucauUUUGUUu 2 8 870 891 [mm9:2:91758850-91758871:+] 0.7137 120 6 -10.78 -0.1353 MIMAT0004691 mmu-miR-382* 228361 Ambra1 uuuUUCACAACAGGCACUUACu :|| | || ||||||| gcuGAGCCUGGU--GUGAAUGa 2 20 223 242 [mm9:2:91758203-91758222:+] 0.5520 144 7 -14.20 -0.7889 MIMAT0004704 mmu-miR-335-3p 228361 Ambra1 ccaguccucGUUAUUACUUUUu :|:| ||||||| uuuuguuuuUAGU-AUGAAAAu 2 14 884 904 [mm9:2:91758864-91758884:+] 0.6898 143 7 -5.52 -1.0425 MIMAT0001093 mmu-miR-411* 228361 Ambra1 ccAAUCACCUGGCACAAUGUAu || ||| | ||||||| uaUUUCUGG---GAGUUACAUu 2 21 168 186 [mm9:2:91650538-91650556:+] 0.5807 144 7 -11.40 -0.3971 MIMAT0004781 mmu-miR-532-3p 228361 Ambra1 acgUUCGGAACCCACACCCUCc || | ||| | ||||||| uagAAACAUUGUG-GUGGGAGg 2 20 934 954 [mm9:2:91758914-91758934:+] 0.6832 157 7 -20.73 -0.2120 MIMAT0003127 mmu-miR-484 228361 Ambra1 uagcccuccccUGACUCGGACu :||||||||| agaaccacacuGCUGAGCCUGg 2 12 212 233 [mm9:2:91758192-91758213:+] 0.5520 151 7 -19.95 -0.1498 MIMAT0003129 mmu-miR-485* 228361 Ambra1 cucuccucucggcaCAUACUga |||||| ucauuuuguuuuuaGUAUGAaa 3 9 881 902 [mm9:2:91758861-91758882:+] 0.6898 120 0 -6.61 -0.2810 MIMAT0003166 mmu-miR-546 228361 Ambra1 cugaggcaCGGUGGUa ||||||| agggacaaGCCACCAg 2 9 410 425 [mm9:2:91758390-91758405:+] 0.5722 140 7 -13.83 -0.1996 MIMAT0005460 mmu-miR-1224 228361 Ambra1 gagguggaggGGUCAGGAGUg | :||||||| ugguggugaaCAGGUCCUCAg 2 12 624 644 [mm9:2:91758604-91758624:+] 0.5917 143 7 -13.76 -0.1475 MIMAT0005460 mmu-miR-1224 228361 Ambra1 gaGGUGGAGG-GGU-CAGG-AGUg ||:|| || || |||| ||| gcCCGCCCCCAGCAUGUCCAUCAa 2 20 663 686 [mm9:2:91758643-91758666:+] 0.5811 121 0 -25.21 -0.1142 MIMAT0003892 mmu-miR-762 228361 Ambra1 cgagaCAGGGCCG--GGGUCGGGg |||| || :||||||| ccagaGUCCAUGCUUUCCAGCCCu 2 18 585 608 [mm9:2:91650955-91650978:+] 0.5587 152 7 -27.07 -0.7082 MIMAT0003892 mmu-miR-762 228361 Ambra1 cgagacagggccggGGUCGGGg ||||||| agcauaggccaaagCCAGCCCa 2 9 742 763 [mm9:2:91758722-91758743:+] 0.5811 140 7 -22.80 -0.2759 MIMAT0015219 mmu-miR-3475 228361 Ambra1 aaGUUUGGU-ACACGGAGGUCu | | ::| ||||||||||| agCCAUUUAUUGUGCCUCCAGu 2 20 652 673 [mm9:2:91651022-91651043:+] 0.5760 162 7 -26.27 -0.7674 MIMAT0014816 mmu-miR-3099 228361 Ambra1 aggggUUGGAGAGA-GA-UCGGAu |||| | || || ||||| agaagAACCACACUGCUGAGCCUg 2 18 209 232 [mm9:2:91758189-91758212:+] 0.5520 124 0 -16.56 -0.1332 MIMAT0004823 mmu-miR-666-3p 228361 Ambra1 ucguccgcuagugcgACGUCGg |||||| aaguuauuauuuaugUGCAGCa 2 8 102 123 [mm9:2:91650472-91650493:+] 0.5694 120 6 -15.43 -0.1581 MIMAT0003898 mmu-miR-760 228361 Ambra1 aggggugucugGGUCUCGGc |||||||| uugccgauucgCCAGAGCCu 2 10 185 204 [mm9:2:91650555-91650574:+] 0.5865 145 7 -20.63 -0.2139 MIMAT0004825 mmu-miR-423-5p 228361 Ambra1 uuucagagcgagagaCGGGGAGu ||||||| uuaaaaugaugacacGCCCCUCa 2 9 1004 1026 [mm9:2:91758984-91759006:+] 0.5791 140 7 -17.98 -0.8102 MIMAT0003464 mmu-miR-686 228361 Ambra1 agaaguggcagaccCUUCGUUa ||||||| cuggugugaaugaaGAAGCAAg 2 9 230 251 [mm9:2:91758210-91758231:+] 0.5520 140 7 -10.46 -0.4032 MIMAT0003474 mmu-miR-694 228361 Ambra1 gaaguccguUGUAAAAGUc |:||||||| -------guAUAUUUUCAg 2 11 1 12 [mm9:2:91650371-91650382:+] 0.6511 146 7 -10.86 -0.4978 MIMAT0003499 mmu-miR-709 228361 Ambra1 agGAGGAC-GGAGACGGAGg || ||| :|||||||| uaCUGCUGAGUUCUGCCUCu 2 18 608 627 [mm9:2:91650978-91650997:+] 0.5760 156 7 -25.61 -0.7387 MIMAT0003499 mmu-miR-709 228361 Ambra1 aggaggacggagACGGAGg |||||| agccauuuauugUGCCUCc 2 8 652 670 [mm9:2:91651022-91651040:+] 0.5760 120 6 -18.95 -0.1018 MIMAT0003502 mmu-miR-712 228361 Ambra1 ccaUGGCGGGCCCACUUCCUc ||| : | |||||||| gacACCUGUGGAGUGAAGGAa 2 19 566 586 [mm9:2:91758546-91758566:+] 0.5536 154 7 -20.93 -0.3471 MIMAT0004237 mmu-miR-742 228361 Ambra1 aaaUGGGUC-GUACCACCGAAAg | ::|| ||| ||||||| ucaAAUUAGACAU-UUGGCUUUu 2 20 700 721 [mm9:2:91651070-91651091:+] 0.5760 148 7 -13.38 -1.1344 MIMAT0004844 mmu-miR-880 228361 Ambra1 agauGAGUCUCUCCUACCUCAu || | | || ||||||| uugcCUGACACAGAAUGGAGUc 2 19 596 617 [mm9:2:91758576-91758597:+] 0.5536 158 7 -15.25 -0.3515 MIMAT0004863 mmu-miR-220 228361 Ambra1 uucacagacUGUGACACCACc |||:||||||| aucauagaaACAUUGUGGUGg 2 13 930 950 [mm9:2:91758910-91758930:+] 0.6832 156 7 -22.56 -0.4930 MIMAT0004867 mmu-miR-327 228361 Ambra1 uagGAGUACG--GGGAGUUCa || :| | |||||||| gcaCUGGUACCUCCCUCAAGc 2 17 13 33 [mm9:2:91757993-91758013:+] 0.6308 147 7 -18.03 -0.2856 MIMAT0004884 mmu-miR-466h 228361 Ambra1 auguGUGUUC----GUGUACGU-GUGu |||||| : |||||| ||| ccucCACAAGGCCCUCCAUGCAGCACc 2 19 694 720 [mm9:2:91758674-91758700:+] 0.5811 121 0 -17.43 -0.4581 MIMAT0004888 mmu-miR-493 228361 Ambra1 ggaccgugugucaucCUGGAAGu ||||||| agauauucuauuccuGACCUUCu 2 9 629 651 [mm9:2:91650999-91651021:+] 0.5760 140 7 -12.66 -0.8987 MIMAT0004888 mmu-miR-493 228361 Ambra1 ggACCGUGUGUCAU--CCU-GGAAGu |||| :: :||| || ||||| gcUGGCCUGGGGUACUAGAGCCUUCc 2 22 169 194 [mm9:2:91758149-91758174:+] 0.5698 120 0 -24.02 -0.1392 MIMAT0004890 mmu-miR-509-5p 228361 Ambra1 uacUAACGGUGUAAGA-CCUCAu | | |:|: |||| ||||| agcACUCCUAU-UUCUGGGAGUu 2 20 160 181 [mm9:2:91650530-91650551:+] 0.5749 121 0 -14.23 -0.3615 MIMAT0004938 mmu-miR-875-3p 228361 Ambra1 guaucggagucAUAAAAGUCc ||||||||| --------guaUAUUUUCAGu 2 11 1 13 [mm9:2:91650371-91650383:+] 0.6511 150 7 -9.05 -0.6503 MIMAT0004862 mmu-miR-877* 228361 Ambra1 acccucCUCCCUCUUC-UCCUGu || | ||||| ||||| gcugcuGA-GCAGAAGCAGGACc 2 17 32 53 [mm9:2:91758012-91758033:+] 0.6308 122 0 -15.44 -0.4752 MIMAT0005830 mmu-miR-466l 228361 Ambra1 uuauacaCACGUACAUAAAUAu || :|| ||||||| ccccuaaGU-UAU-UAUUUAUg 2 16 97 116 [mm9:2:91650467-91650486:+] 0.5694 143 7 -5.12 -0.6202 MIMAT0005835 mmu-miR-1-2-as 228361 Ambra1 accuuacauuucuUCAUACau |||||| ucauuuuguuuuuAGUAUGaa 3 9 881 901 [mm9:2:91758861-91758881:+] 0.6898 120 0 -7.02 -0.3245 MIMAT0005837 mmu-miR-1187 228361 Ambra1 aauGUGUGUAUGUGUGUGU-GUAu || |: || || |||| ||| uucCAGAUUUAGAC-CACACCAUc 2 21 345 367 [mm9:2:91758325-91758347:+] 0.5722 122 0 -11.62 -0.3664 MIMAT0005839 mmu-miR-669f 228361 Ambra1 uaugcacacacacauaCAUAUAc |||||| ----------------GUAUAUu 2 8 1 7 [mm9:2:91650371-91650377:+] 0.7854 120 6 -2.25 -0.1493 MIMAT0005841 mmu-miR-669h-5p 228361 Ambra1 cguGAGUUGAUAUGUG-GGUACGUa ||| || | :| | ||||||| cccCUCCACAAGGCCCUCCAUGCAg 2 22 692 716 [mm9:2:91758672-91758696:+] 0.5811 160 7 -16.05 -0.1362 MIMAT0007868 mmu-miR-1903 228361 Ambra1 acaGAGUCCUUCUU-CUUCUUCc | ::| : ||| ||||||| gagCCUGGUGUGAAUGAAGAAGc 2 20 226 248 [mm9:2:91758206-91758228:+] 0.5520 150 7 -14.35 -0.4531 MIMAT0007874 mmu-miR-1904 228361 Ambra1 ggAGGGAGGUC-UC--CUCGUCUUg |||||| || | |||||||| ccUCCCUCAAGCUGCUGAGCAGAAg 2 21 22 46 [mm9:2:91758002-91758026:+] 0.6308 162 7 -29.33 -0.1367 MIMAT0007877 mmu-miR-1894-5p 228361 Ambra1 ucuccgucCACCAUCC-CCUCUc |||||:|| ||||| gaaacauuGUGGUGGGAGGAGAg 2 15 936 958 [mm9:2:91758916-91758938:+] 0.6832 130 0 -28.11 -0.3205 MIMAT0009393 mmu-miR-1930 228361 Ambra1 ugcGACGUCCA-UGAUAC-CUCCa :| ||||| | ||| |||| agaUUCCAGGUCAGAAUGUGAGGu 2 20 778 801 [mm9:2:91758758-91758781:+] 0.6537 122 0 -17.09 -0.6356 MIMAT0009404 mmu-miR-1940 228361 Ambra1 uugACGAGGUGGAAGAGUCAGGAGGUa |||| ||:|| ||| ||||||| cgaUGCUGCAUCUCCUC-UUCCUCCAc 2 25 479 504 [mm9:2:91650849-91650874:+] 0.4665 178 7 -30.07 -0.2533 MIMAT0009408 mmu-miR-1943 228361 Ambra1 agguccaCGGGUCUA-GGAGGGAa || | |:| ||||||| aaaugagGCACUGGUACCUCCCUc 2 17 6 29 [mm9:2:91757986-91758009:+] 0.6308 151 7 -22.62 -0.2151 MIMAT0009428 mmu-miR-1956 228361 Ambra1 aggcgacUGAGUCGGGACCUGa || | :||||||| uuagaccACACCAUCCUGGACa 2 16 353 374 [mm9:2:91758333-91758354:+] 0.5722 147 7 -18.56 -0.6176 MIMAT0009431 mmu-miR-1958 228361 Ambra1 ugaAUGACGAAGGUGA-AAGGAu |:|||| ||: || ||||| cgaUGCUGCAUCUCCUCUUCCUc 2 20 479 501 [mm9:2:91650849-91650871:+] 0.4665 135 0 -16.68 -0.1210 MIMAT0009435 mmu-miR-1962 228361 Ambra1 uacacAGG-GUCACGGUCGGAGa ||| ||| |||||||| aaccuUCCAGAGUUCCAGCCUCu 2 18 468 490 [mm9:2:91758448-91758470:+] 0.5536 160 7 -25.59 -0.3788 MIMAT0009442 mmu-miR-1969 228361 Ambra1 ugGGUACAAUUUCAGAGGUA-GAa ||| ||| || ||||| || ccCCAAGUUCCAGAGUCCAUGCUu 2 22 576 599 [mm9:2:91650946-91650969:+] 0.5587 129 0 -18.67 -0.3367 MIMAT0009442 mmu-miR-1969 228361 Ambra1 uggguacaauuuCAGAGGUAGAa | :||||||| cccccccccauuGCUUCCAUCUc 2 12 443 465 [mm9:2:91758423-91758445:+] 0.5536 143 7 -16.95 -0.3868 MIMAT0009458 mmu-miR-1981 228361 Ambra1 cgGUGCAGAUUCG--GGUCGG-AAAUg :|: ||:| | |:|||| |||| ucUAUUCCUGACCUUCUAGCCAUUUAu 2 23 635 661 [mm9:2:91651005-91651031:+] 0.5760 121 0 -17.94 -0.6531 MIMAT0009461 mmu-miR-1982.2 228361 Ambra1 gacacCCUCUUGUAU-CCCACu | || || || ||||| uccauGCAGCACCUAUGGGUGu 2 17 708 729 [mm9:2:91758688-91758709:+] 0.5811 120 0 -10.56 -0.1104 MIMAT0011286 mmu-miR-2182 228361 Ambra1 gcgccgcacccuuuaCACCGCa |||||| uacguguaguuuuuaGUGGCGa 2 8 845 866 [mm9:2:91758825-91758846:+] 0.7099 120 6 -17.06 -0.2743 MIMAT0012772 mmu-miR-599 228361 Ambra1 caaACUAUUUGACUGUGUu || | : |||||||| gccUGCUUGCCUGACACAg 2 17 590 608 [mm9:2:91758570-91758588:+] 0.5536 152 7 -13.82 -0.1159 MIMAT0012772 mmu-miR-599 228361 Ambra1 caaACUAUUUGAC-UGUGUu ||: :||||| ||||| gacUGG-GAACUGUACACAc 2 17 62 80 [mm9:2:91758042-91758060:+] 0.6308 122 0 -12.44 -0.4839 MIMAT0014853 mmu-miR-3072 228361 Ambra1 ucuuccgaaggaccUCCCCCGu ||||||| ggagccaguggauaAGGGGGCa 2 9 133 154 [mm9:2:91758113-91758134:+] 0.4495 140 7 -23.36 -0.3860 MIMAT0015640 mmu-miR-3470a 228361 Ambra1 ggucggACCAGAUGUUUCACu || | :||||||| uauuuaUGUGCAGCAAAGUGg 2 16 109 129 [mm9:2:91650479-91650499:+] 0.5694 147 7 -12.96 -0.2950 MIMAT0015641 mmu-miR-3470b 228361 Ambra1 ggucGGACCAGAUGUCUC-ACu |:| | | |||||| || uccuCUUAGCCCACAGAGAUGg 2 18 495 516 [mm9:2:91758475-91758496:+] 0.5536 121 0 -16.13 -0.1492 MIMAT0000125 mmu-miR-23b 228361 Ambra1 ccauuagggACCGUUACACUa || ||||||| uuuuuaguaUGAAAAUGUGAu 2 13 889 909 [mm9:2:91758869-91758889:+] 0.6898 144 7 -12.10 -1.1887 MIMAT0000127 mmu-miR-29b 228361 Ambra1 uugugacuaaaguuuACCACGAu ||||||| aggaagcaggaggcuUGGUGCUu 2 9 285 307 [mm9:2:91650655-91650677:+] 0.5451 140 7 -15.46 -0.4618 MIMAT0000142 mmu-miR-9 228361 Ambra1 agUAUGUCGAUCUAUUGGUUUCu ||: || ||| ||||||| uaAUG-AGGGAGA-CACCAAAGa 2 22 974 994 [mm9:2:91758954-91758974:+] 0.6654 149 7 -14.78 -0.7645 MIMAT0000148 mmu-miR-136 228361 Ambra1 gguaguaGUUUUGU-UUACCUCa ::| ||| ||||||| gcuugccUGACACAGAAUGGAGu 2 16 594 616 [mm9:2:91758574-91758596:+] 0.5536 150 7 -14.75 -0.2315 MIMAT0000219 mmu-miR-24 228361 Ambra1 gacaaggacGACUUGACUCGGu ||| ||||||| agaaccacaCUG--CUGAGCCu 2 14 212 231 [mm9:2:91758192-91758211:+] 0.5520 142 7 -17.35 -0.2625 MIMAT0000219 mmu-miR-24 228361 Ambra1 gacAAGGACGACUUGA-CUCGGu |||| ||| || ||||| gccUUCC--AUGAUCUAGAGCCc 2 20 188 208 [mm9:2:91758168-91758188:+] 0.5609 120 0 -16.03 -0.1323 MIMAT0000233 mmu-miR-200b 228361 Ambra1 aguaguaaugguCCGUCAUAAu | ||||||| gcaccuauggguGUCAGUAUUa 2 11 716 737 [mm9:2:91758696-91758717:+] 0.5811 142 7 -14.97 -0.6557 MIMAT0000247 mmu-miR-143 228361 Ambra1 cucgauGUCACGAA-GUAGAGu || ||||| |||||| ccccccCAUUGCUUCCAUCUCu 2 16 445 466 [mm9:2:91758425-91758446:+] 0.5536 131 6 -15.17 -0.5819 MIMAT0004576 mmu-miR-296-3p 228361 Ambra1 ccUCUCGGAGGUGGGUUGGGAg :|:| || || ||||||| uaGGGGACU-CAAACAACCCUg 2 21 298 318 [mm9:2:91758278-91758298:+] 0.5621 154 7 -22.05 -0.1987 MIMAT0000387 mmu-miR-130b 228361 Ambra1 uacGGGAAAGUAGUAAC-GUGAc :|||||| | ||| |||| auuUCCUUUC-UGUUUGUCACUc 2 20 908 929 [mm9:2:91758888-91758909:+] 0.6898 125 0 -14.54 -1.0140 MIMAT0000532 mmu-miR-23a 228361 Ambra1 ccuuuagggACCGUUACACUa || ||||||| uuuuuaguaUGAAAAUGUGAu 2 13 889 909 [mm9:2:91758869-91758889:+] 0.6898 144 7 -11.44 -1.1887 MIMAT0000535 mmu-miR-29a 228361 Ambra1 auuggcuaaagucuACCACGAu ||||||| ggaagcaggaggcuUGGUGCUu 2 9 286 307 [mm9:2:91650656-91650677:+] 0.5451 140 7 -15.45 -0.4618 MIMAT0000536 mmu-miR-29c 228361 Ambra1 auuggcuaaaguuuACCACGAu ||||||| ggaagcaggaggcuUGGUGCUu 2 9 286 307 [mm9:2:91650656-91650677:+] 0.5451 140 7 -14.08 -0.4618 MIMAT0000538 mmu-miR-31 228361 Ambra1 guCGAUA-CGGUCGU-AGAACGGa || :| |: |||| ||||||| uaGCAGUGGUGAGCAUUCUUGCCu 2 21 69 92 [mm9:2:91650439-91650462:+] 0.5694 158 7 -26.34 -0.6002 MIMAT0000538 mmu-miR-31 228361 Ambra1 gucgaUACGGUCGUAGAACGGa || : | : ||||||| uugagAUCUGACUCUCUUGCCu 2 18 381 402 [mm9:2:91650751-91650772:+] 0.5351 145 7 -14.59 -0.3285 MIMAT0000538 mmu-miR-31 228361 Ambra1 gucGAUACGGUCGUAGAA-CGGa || | :|| | |||| ||| agcCUCUCUCAUCCUCUUAGCCc 2 20 484 506 [mm9:2:91758464-91758486:+] 0.5536 123 0 -10.41 -0.3034 MIMAT0000546 mmu-miR-103 228361 Ambra1 aguaUCGGGACAUGUUACGACGa |||: | |:||||||| ugucAGCUGGGGCCGAUGCUGCa 2 20 466 488 [mm9:2:91650836-91650858:+] 0.4665 155 7 -19.50 -0.1121 MIMAT0000580 mmu-miR-148b 228361 Ambra1 uguUUCAAGACACUAC-GUGACu :| | || ||||| ||||| aguGACUCCU-UGAUGCCACUGu 2 20 447 468 [mm9:2:91650817-91650838:+] 0.4613 125 0 -14.33 -0.1038 MIMAT0000647 mmu-miR-107 228361 Ambra1 acuaUCGGGACAUGUUACGACGa |||: | |:||||||| ugucAGCUGGGGCCGAUGCUGCa 2 20 466 488 [mm9:2:91650836-91650858:+] 0.4665 155 7 -20.48 -0.1121 MIMAT0000652 mmu-miR-25 228361 Ambra1 agucUGG-CUC-UGUUCAC-GUUAc ||: ||| | |:||| |||| cuuaACUAGAGUAGAGGUGACAAUu 2 19 313 337 [mm9:2:91650683-91650707:+] 0.5003 120 0 -12.80 -0.5224 MIMAT0000654 mmu-miR-32 228361 Ambra1 acGUUGA-AUCAU-UACAC-GUUAu :|||| |||| | ||| |||| cuUAACUAGAGUAGAGGUGACAAUu 2 21 313 337 [mm9:2:91650683-91650707:+] 0.5003 126 0 -14.77 -0.5224 MIMAT0000657 mmu-miR-200c 228361 Ambra1 agGUAGUAAUGGGCCGUCAUAAu || | |: :| ||||||| agCACCUAUGGGUGUCAGUAUUa 2 22 715 737 [mm9:2:91758695-91758717:+] 0.5811 149 7 -16.50 -0.6557 MIMAT0000671 mmu-miR-224 228361 Ambra1 uugccuuGGUG-A-UCACUGAAu |||: | |||||||| acagcuuCCAUGUCAGUGACUUa 2 15 528 550 [mm9:2:91758508-91758530:+] 0.5536 148 7 -17.58 -0.5274 MIMAT0000677 mmu-miR-7a 228361 Ambra1 uguUGUUUUAGUGAUCAGAAGGu | ||:| :| |||||||| cccAGAAGAGUA-AAGUCUUCCa 2 21 328 349 [mm9:2:91758308-91758329:+] 0.5722 154 7 -19.16 -1.1229 MIMAT0000678 mmu-miR-7b 228361 Ambra1 uguUGUUUUAGUGUUCAGAAGGu | ||:| :| ||||||||| cccAGAAGAGUA-AAGUCUUCCa 2 21 328 349 [mm9:2:91758308-91758329:+] 0.5722 162 7 -21.58 -1.1229 MIMAT0000704 mmu-miR-361 228361 Ambra1 cauggggaccUCUAAGACUAuu ||: |||||| ggcgaaaucaAGGCUCUGAUca 3 13 862 883 [mm9:2:91758842-91758863:+] 0.7137 128 0 -9.86 -0.1300 MIMAT0000746 mmu-miR-381 228361 Ambra1 ugucuCUCGAACGG---GAACAUAu |||:|| || ||||||| aaauuGAGUUUUCCUAGCUUGUAUc 2 18 677 701 [mm9:2:91651047-91651071:+] 0.5760 156 7 -14.24 -0.6001 MIMAT0000746 mmu-miR-381 228361 Ambra1 ugucucucGAACGGGAACAUAu :||| ::|||||| gcuuuuguUUUGAUUUUGUAUu 2 15 716 737 [mm9:2:91651086-91651107:+] 0.5760 138 6 -10.12 -0.1045 MIMAT0000748 mmu-miR-383 228361 Ambra1 ucgGUGUCAG-UGGAAGACUAGa |: | || | ||||||| uggCGAAAUCAAGGCUCUGAUCa 2 20 861 883 [mm9:2:91758841-91758863:+] 0.7137 142 7 -13.21 -1.0182 MIMAT0004747 mmu-miR-411 228361 Ambra1 gcaugcgauaUGCCAGAUGAu |: ||||||| aggagaggggAUAGUCUACUg 2 12 952 972 [mm9:2:91758932-91758952:+] 0.6766 143 7 -13.17 -0.6259 MIMAT0001537 mmu-miR-429 228361 Ambra1 ugccguaaugguCUGUCAUAAu | ||||||| gcaccuauggguGUCAGUAUUa 2 11 716 737 [mm9:2:91758696-91758717:+] 0.5811 142 7 -16.52 -0.6557 MIMAT0003128 mmu-miR-485 228361 Ambra1 cuuAAGUAGUGCCGGUCGGAGa ||| | |||||||| accUUCCAGAGUUCCAGCCUCu 2 20 469 490 [mm9:2:91758449-91758470:+] 0.5536 147 7 -18.89 -0.3848 MIMAT0003181 mmu-miR-367 228361 Ambra1 agUGGUAACGAUUUCAC-GUUAa ||:| |: :|:||| |||| uaACUAGAGUAGAGGUGACAAUu 2 21 315 337 [mm9:2:91650685-91650707:+] 0.5003 124 0 -13.05 -0.5294 MIMAT0003182 mmu-miR-494 228361 Ambra1 cuccaAAGGGCACA--UAC-AAAGu |||| | || ||| |||| ccaagUUCCAGAGUCCAUGCUUUCc 2 18 578 602 [mm9:2:91650948-91650972:+] 0.5587 120 0 -9.04 -0.2720 MIMAT0003450 mmu-miR-488 228361 Ambra1 cuggUUCUUUGUCGGAAAGuu | | :|: |||||| gaaaAUGUGAUUUCCUUUCug 3 18 899 919 [mm9:2:91758879-91758899:+] 0.6898 125 0 -7.23 -0.1546 MIMAT0003456 mmu-miR-495 228361 Ambra1 uuCUUCACGUGGUACAAACAaa || | | :: ||||||| guGAUUUCCUUUCUGUUUGUca 3 21 905 926 [mm9:2:91758885-91758906:+] 0.6898 132 0 -10.13 -0.1255 MIMAT0003456 mmu-miR-495 228361 Ambra1 uucuucacgugguacAAACAAa |||||| caaggcucugaucauUUUGUUu 2 8 870 891 [mm9:2:91758850-91758871:+] 0.7137 120 6 -11.57 -0.1353 MIMAT0003515 mmu-miR-721 228361 Ambra1 aaGGGGGAAAAUUAAC-GUGAc ::||:|| |: ||| |||| auUUCCUUUCUGUUUGUCACUc 2 20 908 929 [mm9:2:91758888-91758909:+] 0.6898 127 0 -13.90 -1.0197 MIMAT0005850 mmu-miR-1192 228361 Ambra1 uuaaaccaGACAAACAAACAaa || | ||||||| gugauuucCUUUCUGUUUGUca 3 15 905 926 [mm9:2:91758885-91758906:+] 0.6898 134 0 -10.25 -0.1255 MIMAT0005850 mmu-miR-1192 228361 Ambra1 uuaaaccagacaaacAAACAAa |||||| caaggcucugaucauUUUGUUu 2 8 870 891 [mm9:2:91758850-91758871:+] 0.7137 120 6 -11.32 -0.1313

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G058640 Ambra1 Mus musculus 228361

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 Ambra1; Kiaa1736 mmu-let-7i 11 58 UGUCGUG-------------UUUGAUGA------------ UGGAGU :|||| ||:||:|| |||||| -AGGCACUGGUACCUCCCUCAAGCUGCUGAGCAGAAGCAGGACCUCAC Ambra1; Kiaa1736 mmu-miR-101b 56 77 GAAGUCGAUAGUGUCAUGACAU- |||||: | :| |||||| --ACAGCUGACUGGGAACUGUAC Ambra1; Kiaa1736 mmu-miR-107 16 39 -ACUAUC--GGGACAUGUUACGACGA- ||:|| |||| ||| |||||| CUGGUACCUCCCU---CAA-GCUGCUG Ambra1; Kiaa1736 mmu-miR-10a 603 630 -GUGUUUAAGCCUAG---AUGUCCCAU- ||||:| :||| |||| |||: ACACAGAA-UGGAGUCAAUACAUGGUGG Ambra1; Kiaa1736 mmu-miR-125a 137 166 -GUGUCCAAUUUCCCAGAG----UCCCU- || || |||:||| ||||: CCAGUGGAUAAGGGGGCAGUCCAAGGGGC Ambra1; Kiaa1736 mmu-miR-125b 640 661 -AGUGUUCAAUCCCAGAGUCCCU ||| :||| :|||| :||| CUCAGGAGUGGGGGUG-UAGGC- Ambra1; Kiaa1736 mmu-miR-140 402 424 -GAUGGUAUCCCAUUUUGGUGAC ||||: |||| ||:|||| ACUACUGGAGGGACAAGCCACC- Ambra1; Kiaa1736 mmu-miR-140* 155 184 -AGGCA-CCAA----GAUGGGACACCAU- ||| || ||: |||| |||| GUCCAAGGGGCAAGGCUGGCCUGGGGUAC Ambra1; Kiaa1736 mmu-miR-143 433 467 ACUCGAUGUC-----------ACGAA-GUAGAGU |||| ||| ||||| |||||| GGAGCAACACCCCCCCCCCAUUGCUUCCAUCUCU Ambra1; Kiaa1736 mmu-miR-145 145 177 -UUCCCUA---AGGA--CCC-UUUUGACCUG- |||||: ||| ||| ||::|||| | UAAGGGGGCAGUCCAAGGGGCAAGGCUGGCCU Ambra1; Kiaa1736 mmu-miR-149 121 142 CCUCACUUCUGUGCCUCGGUCU |:||| | ||:|||||||| AGGGUGGGG-CAUGGAGCCAGU Ambra1; Kiaa1736 mmu-miR-150 941 964 -GUGACCAUGUUCC-CAACCCUCU : ||||: :||| | |||| AUUGUGGUGGGAGGAGAGGGGAU- Ambra1; Kiaa1736 mmu-miR-15b 793 828 -ACAUUU--------GGUACUA-----CACGACGAU |||:|: |::|||| |||:||| AUGUGAGGUCUUGGUCUGUGAUUUGAGGUGUUGCA- Ambra1; Kiaa1736 mmu-miR-16 805 828 GCGGUUA-UAAAUG-CACGACGAU |:| ||||: |||:||| GGUCUGUGAUUUGAGGUGUUGCA- Ambra1; Kiaa1736 mmu-miR-17-3p 698 718 AUGUUCACGGGAGUGACGUCA ||||| |||||| ||||| CACAAG-GCCCUCCAUGCAGC Ambra1; Kiaa1736 mmu-miR-181b 704 731 -GGGUGGC-UGUCGU---UACUUACAA ||| || :||||| ||| ||| GCCCUCCAUGCAGCACCUAUGGGUGUC Ambra1; Kiaa1736 mmu-miR-181d 702 731 -UUGGGUGGC-UGUUGU---UACUUACAA ::||| || :||:|| ||| ||| AGGCCCUCCAUGCAGCACCUAUGGGUGUC Ambra1; Kiaa1736 mmu-miR-185 484 499 CUUGACGGAAAGAG-AGGU |||| |||| ||| ----AGCCUCUCUCAUCCU Ambra1; Kiaa1736 mmu-miR-193 647 665 GACCCUGAAACAUCCGGUCAA ||||: |||||||::| GUGGGGG--UGUAGGCUGGC- Ambra1; Kiaa1736 mmu-miR-196a 708 743 -GGU-UGUUGU----ACUU-------UGAUGGAU- ||| :||:|| ||:: |:|||||| UCCAUGCAGCACCUAUGGGUGUCAGUAUUACCUAA Ambra1; Kiaa1736 mmu-miR-200b 709 739 CAGUA-GUAAUGG---UCCG---UCAUAAU- ||| || ||| :||: ||||||| -CCAUGCAGCACCUAUGGGUGUCAGUAUUAC Ambra1; Kiaa1736 mmu-miR-200c 708 739 -GGUA-GUAAUGGG---CCG---UCAUAAU- |||| || |||: ||: ||||||| UCCAUGCAGCACCUAUGGGUGUCAGUAUUAC Ambra1; Kiaa1736 mmu-miR-204 126 154 GUCCGUAUCCUA------CUGUUUCCCUU :||||| ||| ||:||:|||: GGGGCAU-GGAGCCAGUGGAUAAGGGGGC Ambra1; Kiaa1736 mmu-miR-205 563 587 -GUCUGAGGCCACCUUACUUCCU- |:||| || |||||:||||||| GCGGACACCUGUGGAGUGAAGGAA Ambra1; Kiaa1736 mmu-miR-207 769 803 -CUCCCUCCUCUC-GGUCCU--------CUUCG- ||||||||||| ||||| ||:|: GGAGGGAGGAGAUUCCAGGUCAGAAUGUGAGGUC Ambra1; Kiaa1736 mmu-miR-210 30 65 AGUCGGCGAC---------------AGUGUGCGUGUC |||:|||| ||||| || | -AAGCUGCUGAGCAGAAGCAGGACCUCACA-GCUGAC Ambra1; Kiaa1736 mmu-miR-211 126 154 -UCCGUUUCCUA------CUGUUUCCCUU :|||| ||| ||:||:|||: GGGGCAU-GGAGCCAGUGGAUAAGGGGGC Ambra1; Kiaa1736 mmu-miR-217 533 568 UAGGU-CAGUCAA-----------GGACUACGUCAU |||| |||||| || ||||:| UUCCAUGUCAGUGACUUAUGCUCACCAAAUGCGGA- Ambra1; Kiaa1736 mmu-miR-218 512 533 UGUACCAAUCUAGUUCGUGUU- |||| :|||:|||||: -GAUGGAAAAGUCAGGCACAGC Ambra1; Kiaa1736 mmu-miR-219 373 392 -UCUUAACGCAAACCUGUUAGU ||||| |:| |||||:|: CAGAAUGGUG---GGACAGUUC Ambra1; Kiaa1736 mmu-miR-224 510 552 AUUUGCCU--------UGG--UGA--------UCACUGAAU |:|:||| :| :|| ||||||||| GAGAUGGAAAAGUCAGGCACAGCUUCCAUGUCAGUGACUUAU Ambra1; Kiaa1736 mmu-miR-23a 775 800 -CCUUUAGGGACCG---UUACACUA |||:||:|| ||: ||||||| AGGAGAUUCCAGGUCAGAAUGUGAG Ambra1; Kiaa1736 mmu-miR-23b 775 800 -CCAUUAGGGACCG---UUACACUA || :||:|| ||: ||||||| AGGAGAUUCCAGGUCAGAAUGUGAG Ambra1; Kiaa1736 mmu-miR-24 169 192 -GACAAGGACGACUUGA-CUCGGU ||| |||| | ||| ||||| GCUGG-CCUGGGGUACUAGAGCCU Ambra1; Kiaa1736 mmu-miR-26a 168 190 -CGGAUAGGACCUAAUGAACUU- ||: ||||| |||| ||: GGCUGG-CCUGGGGUACUAGAGC Ambra1; Kiaa1736 mmu-miR-26b 167 190 -UUGGAUAGGACUUAAUGAACUU- ::|: ||||: |||| ||: AGGCUGG-CCUGGGGUACUAGAGC Ambra1; Kiaa1736 mmu-miR-27b 45 72 -CGUCUUGAA---UCGG-UGACACUU- ||||:|| |||: |||| ||| AGCAGGACCUCACAGCUGACUGGGAAC Ambra1; Kiaa1736 mmu-miR-291b-3p 1 19 CUGUUUGUUUUACCUACGUGAAA |:|||||||| ||||| ---AGACAAAAUGAG-GCACUG- Ambra1; Kiaa1736 mmu-miR-296 106 132 -UGUCCUAA-----CUCCC-CCCCGGGA |||||| ||||| ||||| AACAGGAGGAAUGAGAGGGUGGGGCA-- Ambra1; Kiaa1736 mmu-miR-298 378 402 -CCUUCUUGUCGGGAGGAGACGG- || :|:||||::|||| ||||| UGGUGGGACAGUUCUCCCCUGCCC Ambra1; Kiaa1736 mmu-miR-29a 810 828 UUGGCUAAAGUCUACCACGAU :||||| ||:|| ||| --GUGAUUUGAGGUGUUGCA- Ambra1; Kiaa1736 mmu-miR-300 80 102 CUUC-UCUCGA--ACGGGAACGUAU || |||||| ||||: |||| -CAGAAGAGCUGAUGCCU--GCAUC Ambra1; Kiaa1736 mmu-miR-30a-3p 31 71 -CGACG-------UUUGUA----------GGCUGACUUUC ||||| ||:|| |:|||||::| AGCUGCUGAGCAGAAGCAGGACCUCACAGCUGACUGGGAA Ambra1; Kiaa1736 mmu-miR-324-3p 708 735 -GGU-CGUCGUGG--ACCC-C-GUCACC ||| |||||||| |||| | |||| UCCAUGCAGCACCUAUGGGUGUCAGUA- Ambra1; Kiaa1736 mmu-miR-326 765 789 -UGACCUCCUUCC-CG--GGUCUCC :|||||||:||| | ||||: GGCUGGAGGGAGGAGAUUCCAGGU- Ambra1; Kiaa1736 mmu-miR-328 112 142 UGCCU-----UCCCGUCUCU--CC-CGGUC- ||| ||||::|:| || ||||| -AGGAAUGAGAGGGUGGGGCAUGGAGCCAGU Ambra1; Kiaa1736 mmu-miR-331 282 305 AAGAUCCUAU---CCGGGUCCCCG ||||||| ||||:||||| -CCUAGGAUCACUGGCCUAGGGGA Ambra1; Kiaa1736 mmu-miR-338 75 108 AGU-UGUUUUAGUGACUACGA--------CCU- || |||:|| :||||||| ||| ACACACAGAAGAGCUGAUGCCUGCAUCCAGGAA Ambra1; Kiaa1736 mmu-miR-339 945 963 ACUCGAGGACCUCCUGUCCCU- :|: |||||| ||||: -UGGUG---GGAGGAGAGGGGA Ambra1; Kiaa1736 mmu-miR-342 785 822 CUGCCC-----ACGCUAA------AGACAC---ACUCU- || ||:|| |||||| ||||: --AGGUCAGAAUGUGAGGUCUUGGUCUGUGAUUUGAGGU Ambra1; Kiaa1736 mmu-miR-346 118 145 -UCUCCGUCCGUGAGCC-C-GUCUGU- ||||| || :| :|| | ||| : GAGAGGGUGGGGCAUGGAGCCAGUGGA Ambra1; Kiaa1736 mmu-miR-365 143 168 -UAUUCCUAAAAA----UCCCCGUAAU ||||||: ||||||| GAUAAGGGGGCAGUCCAAGGGGCAA-- Ambra1; Kiaa1736 mmu-miR-370 652 681 -UUGGUCCAA---GGU-GGGGUCGUCCG- : :||| ||: |||||||| |: GGUGUAGGCUGGCCCGCCCCCAGCAUGUC Ambra1; Kiaa1736 mmu-miR-376a* 944 973 GAGUAUCUUCCUCU-------UAGAUGG- | :|:|:|||||| :|||||: GUGGUGGGAGGAGAGGGGAUAGUCUACUG Ambra1; Kiaa1736 mmu-miR-376b 248 271 UUUCACCUACA-AGGAGAUACUA ||||||:||| ||: |||||| CAAGUGGGUGUCUCUGCUAUGAA Ambra1; Kiaa1736 mmu-miR-378 758 781 -UGUGUCCUGGACCUCAGUCCUC- :| ||||: |||||| ||||| AGCCCAGGG-CUGGAGGGAGGAGA Ambra1; Kiaa1736 mmu-miR-383 171 203 -UCGGUGUCAG------UGGAAG--ACUAGA- :||| :| :||||| |||||| UGGCCUGGGGUACUAGAGCCUUCCAUGAUCUA Ambra1; Kiaa1736 mmu-miR-384 628 650 ACACUUGUUAAAGA-UCCUUA- |||||||: || ||||:| GGUGAACAGGUCCUCAGGAGUG Ambra1; Kiaa1736 mmu-miR-422b 187 212 CCGGAAG--ACUGAGGUUCAGGUC- |||||| |||: :|| |||| AGCCUUCCAUGAUCUAGAGCCCAGA Ambra1; Kiaa1736 mmu-miR-423 159 176 GACUCCCCGGAGUCUGGCUCGA |||||| ||:|:| || --AAGGGGCA--AGGCUG-GCC Ambra1; Kiaa1736 mmu-miR-433-5p 541 560 CUUAUUACUGUC--CGAGUGGCAU |:|||| ||||||| ---CAGUGACUUAUGCUCACCA-- Ambra1; Kiaa1736 mmu-miR-455-5p 511 532 GCUACA---UCAGGUUUCCGUGUAU |||| |||| ||||||| AGAUGGAAAAGUC---AGGCACAG- Ambra1; Kiaa1736 mmu-miR-464 603 630 AUAGAGUGUCUUAUUUGA-------ACCAU- ||||||||::| | ||||: ----ACACAGAAUGGAGUCAAUACAUGGUGG Ambra1; Kiaa1736 mmu-miR-465-3p 862 884 AGAUGAAUCU-UUCCGGGACUAG- :| |||||:|||||| --GGCGAAAUCAAGGCUCUGAUCA Ambra1; Kiaa1736 mmu-miR-469 126 156 -CCUGUGGUUCUAGUUACUU---UCUCCGU- ||:||: :|| ||:||:| :|:|||| GGGGCAUGGAGC-CAGUGGAUAAGGGGGCAG Ambra1; Kiaa1736 mmu-miR-470 135 165 AGUGGUCA---------CGGUCAGGUUCUU- :||||| | |||||||||:: -AGCCAGUGGAUAAGGGGGCAGUCCAAGGGG Ambra1; Kiaa1736 mmu-miR-484 149 180 UAGCCC-------UCCCC----UGACUCGGACU- ||| ||||| :||| |||||: --GGGGCAGUCCAAGGGGCAAGGCUG-GCCUGGG Ambra1; Kiaa1736 mmu-miR-485-5p 520 537 CUUAAGUAGUGCCG-GUCGGAGA :||| ||| ||||:|| -----AGUCA-GGCACAGCUUCC Ambra1; Kiaa1736 mmu-miR-489 706 733 CGACGGUAU-------AUACACCACAGUAA || ||||: |||| ||||||| CCU-CCAUGCAGCACCUAUG-GGUGUCAG- Ambra1; Kiaa1736 mmu-miR-490 764 790 GUCGUA---CCUCAG--GAGGUCCAAC :|| |||| :||||||| GGGCUGGAGGGAGGAGAUUCCAGGUC- Ambra1; Kiaa1736 mmu-miR-497 212 228 AUGUUUGGUGUCACACGACGAC- :||||||| |||||| --AGAACCACA-----CUGCUGA Ambra1; Kiaa1736 mmu-miR-501* 633 659 -GUUUAGGAA----CGGGCCCACGUAA ||::|||| |: |||||:| ACAGGUCCUCAGGAGUGGGGGUGUAG- Ambra1; Kiaa1736 mmu-miR-503 17 40 CGUCAUGACAAGGG----CGACGAU- :|||| |||| ||||||: -UGGUACC--UCCCUCAAGCUGCUGA Ambra1; Kiaa1736 mmu-miR-540 282 308 -GGUCCUAG---CUGGAGA--CUGGA |:|||||| |:||| |||: CCUAGGAUCACUGGCCUAGGGGACUC Ambra1; Kiaa1736 mmu-miR-546 544 561 -CUGAGGCACG-GUGGUA ||||: ||| ||||| UGACUUA-UGCUCACCAA Ambra1; Kiaa1736 mmu-miR-592 997 1021 -UGUAGUAGCG-UAUAACUGUGUUA |||||||: ||: ||||||: UACAUCAUUAAAAUGAUGACACGC- Ambra1; Kiaa1736 mmu-miR-615 768 794 UUCUCCCUCU----GGGUCCGAGCCU- :|||||||: :||||| || || UGGAGGGAGGAGAUUCCAGG-UCAGAA Ambra1; Kiaa1736 mmu-miR-652 309 333 ACGUGUUGGGAUCAC----CGCGGUAA ||||||||:| || ||| --AACAACCCUGGGCAGAAGCCCCAG- Ambra1; Kiaa1736 mmu-miR-665 158 180 AUUCCCUGGAGUCGGA-GGACCA |||||:| :||: ||||| CAAGGGGCAA-GGCUGGCCUGGG Ambra1; Kiaa1736 mmu-miR-666 635 670 -CCGAGAGUG-------------UCGACACGGGCGA ||: |||| :|||| |||||| AGGUCCUCAGGAGUGGGGGUGUAGGCUG-GCCCGCC Ambra1; Kiaa1736 mmu-miR-669a 62 84 -UGUA-CUUGUACGUGUGUGUUGA || |||| ||:|||||||: GACUGGGAAC-UGUACACACAGA- Ambra1; Kiaa1736 mmu-miR-671 687 712 GGAGGUCGGGGAGGUC--CCGA-AGGA |||| |||||||| ||| ||| GCUCC--CCCCUCCACAAGGCCCUCCA Ambra1; Kiaa1736 mmu-miR-673 155 181 GAGGUUCCUGGUCUCGAC---ACUC- |||||||: || :|||| ||:| GUCCAAGGGGCAAGGCUGGCCUGGGG Ambra1; Kiaa1736 mmu-miR-674 525 547 AUGUGGUGAGGGUAGAGUCACG :||| :||:|||| |||||| GGCACAGCUUCCAUGUCAGUGA Ambra1; Kiaa1736 mmu-miR-675-3p 116 138 UGACUCGCCAAUCCCGUAUGUC- |||| || |:||||||: || -AUGAGAGGGUGGGGCAUGGAGC Ambra1; Kiaa1736 mmu-miR-675-5p 702 722 UGACACCCGGGAAAGG---CGUGGU |||||| ||||| -----AGGCCCUCCAUGCAGCACCU Ambra1; Kiaa1736 mmu-miR-676 747 772 -UCGAGUU---GUUGGAGUCCUG-CC- :|| ||| ||:|| ||||:| || AGGC-CAAAGCCAGCC-CAGGGCUGGA Ambra1; Kiaa1736 mmu-miR-677 40 65 AGUCUUCGA-UU--AGUAGUGACUU ||||||| :| ||| :|||| GCAGAAGCAGGACCUCACAGCUGAC Ambra1; Kiaa1736 mmu-miR-681 741 771 -UCGA---CGGA--CGGUCGC--UCCGAC- ||| ||| |||||| :||||| AAGCAUAGGCCAAAGCCAGCCCAGGGCUGG Ambra1; Kiaa1736 mmu-miR-682 48 70 GUCUGAAGUGAC-ACUGACGUC :||| |||| | |||||| : AGGACCUCACAGCUGACUGGGA Ambra1; Kiaa1736 mmu-miR-687 91 108 AGUAAC-GACGUAAGGUCCUAUC || ||||| ||||||| ---AUGCCUGCA-UCCAGGAA-- Ambra1; Kiaa1736 mmu-miR-688 790 815 -CUUAUUCAUCAG---CGGACGCU- ||||: | :||| |:|||:|| AGAAUGUGAGGUCUUGGUCUGUGAU Ambra1; Kiaa1736 mmu-miR-693-5p 650 664 CUUUUGAAAGCCUACA-CCGAC- ||:||| ||||| ---------GGGGUGUAGGCUGG Ambra1; Kiaa1736 mmu-miR-696 503 534 -GGGUGUC------------GUUCGUGUGCG- ||||||| ||:||||| || GCCCACAGAGAUGGAAAAGUCAGGCACA-GCU Ambra1; Kiaa1736 mmu-miR-697 637 658 AGAGGUGUCCU-GGUCCUACAA ||| ||||| : :||:||| -GUCCUCAGGAGUGGGGGUGUA Ambra1; Kiaa1736 mmu-miR-700 648 670 -CCACCUGAGCCAA--GGGCGCAC || || | || ||||| UGGGGGUGUAGGCUGGCCCGCC-- Ambra1; Kiaa1736 mmu-miR-701 846 866 AGGUAGAU--AAAGUCGCCGAUU |:| || |||:||:||| -ACGUGUAGUUUUUAGUGGCG-- Ambra1; Kiaa1736 mmu-miR-702 121 168 -CUCGCCCC---------------AUUUCCCA-------- CCCGU |:|:|||| |||:||| ||||| AGGGUGGGGCAUGGAGCCAGUGGAUAAGGGGGCAGUCCAAGGGGCAA Ambra1; Kiaa1736 mmu-miR-705 662 697 ACGGGUGGGG--------------UGGAGGGUGG- ||||:|||| | ||||| || GGCCCGCCCCCAGCAUGUCCAUCAAGCUCCCCCCU Ambra1; Kiaa1736 mmu-miR-707 149 174 GCAUCCGU-----UCGCCGUACUGAC- :|||| || |||| |:||| --GGGGCAGUCCAAGGGGCAAGGCUGG Ambra1; Kiaa1736 mmu-miR-709 472 502 -AGG-----AGGACGGAGAC----GGAGG- ||| ||| |||||| ||||: UUCCAGAGUUCCAGCCUCUCUCAUCCUCUU Ambra1; Kiaa1736 mmu-miR-712 754 778 CCAUGG-CGGG-CCCA--CUUCCUC- :|| |||| ||| ||:|||| --AGCCAGCCCAGGGCUGGAGGGAGG Ambra1; Kiaa1736 mmu-miR-712* 633 666 -GUUGUGGG-------CCCCCAC---UGAGCGU ||: ||: ||||||| :|| || ACAGGUCCUCAGGAGUGGGGGUGUAGGCUGGCC Ambra1; Kiaa1736 mmu-miR-718 747 775 GCUG----UGGGCCGG--CCCG-CCUUC- |:| :|| ||| |||| |||:| AGGCCAAAGCCA-GCCCAGGGCUGGAGGG Ambra1; Kiaa1736 mmu-miR-744 651 678 -CGACA----AUCGGGAUCGGGG--CGU- | ||| |:|||| ||||| ||| GGGUGUAGGCUGGCCC--GCCCCCAGCAU Ambra1; Kiaa1736 mmu-miR-762 659 683 CGAGACAGGGCCGGGGUCGG---GG- ||| |||| ||||||| || --GCUGGCCCGCCCCCAGCAUGUCCA Ambra1; Kiaa1736 mmu-miR-763 11 37 -CGGUGACCAAGAAGGG---UCGACC | ||||||| | |||| ||||| AGGCACUGGUACCUCCCUCAAGCUGC Ambra1; Kiaa1736 mmu-miR-770-3p 528 559 GGUCG-AGGUGCAGUC--------CGGGUGC |||| ||||:||||| ||:||| ACAGCUUCCAUGUCAGUGACUUAUGCUCACC Ambra1; Kiaa1736 mmu-miR-7b 329 351 UUGUUUUAGUG-UUCAGAAGGU- ||:|| |||||||||| -CCAGAAGAGUAAAGUCUUCCAG Ambra1; Kiaa1736 mmu-miR-99a 283 305 UGUUCUAGC--CUAGAUGCCCA :|:|||| |: ||| ||| CUAGGAUCACUGGCCUAGGGGA Ambra1; Kiaa1736 mmu-miR-136 609 616 A----------------GGUAGUA-GUUUUG---UUUACCUCA || | :|| :|||||||| UGGAGUGAAGGAAAUAGCCUGCUUGCCUGACACAGAAUGGAGUC Ambra1; Kiaa1736 mmu-miR-146 387 394 ----UUGGG-------------------UACCUUAAGUCAAGAGU :||| :|||:| |||||||| UUUAGACCACACCAUCCUGGACAGAAUGGUGGGA--CAGUUCUCC Ambra1; Kiaa1736 mmu-miR-146b 387 394 ----------------------UCGGA-UACCUUAAGUCAAGAGU || :|||:| |||||||| UUUAGACCACACCAUCCUGGACAGAAUGGUGGGA--CAGUUCUCC Ambra1; Kiaa1736 mmu-miR-149 134 141 C----------------------CUCACUUCUGUGCCUCGGUCU |:|| ::|:||:|||||||| AUCCAGGAACAGGAGGAAUGAGAGGGU-GGGGCAUGGAGCCAGU Ambra1; Kiaa1736 mmu-miR-200b 730 737 CA-------------GUA-GUAAUGG---UCC---GUCAUAAU ||| || ||| :|| |||||||| CUCCACAAGGCCCUCCAUGCAGCACCUAUGGGUGUCAGUAUUAC Ambra1; Kiaa1736 mmu-miR-200c 730 737 --------------GGUA-GUAAUGGG--CC----GUCAUAAU |||| || |||: || |||||||| CUCCACAAGGCCCUCCAUGCAGCACCUAUGGGUGUCAGUAUUAC Ambra1; Kiaa1736 mmu-miR-224 543 550 A--UUUGCCUU----------------GGUGA--UCACUGAAU |:|:|||| |||: ||||||||| CAGAGAUGGAAAAGUCAGGCACAGCUUCCAUGUCAGUGACUUAU Ambra1; Kiaa1736 mmu-miR-23a 792 799 -------------------CCUUUAGGGACCG---UUACACUA |||:||:|| ||: ||||||| CAGCCCAGGGCUGGAGGGAGGAGAUUCCAGGUCAGAAUGUGAG Ambra1; Kiaa1736 mmu-miR-23b 792 799 -------------------CCAUUAGGGACCG---UUACACUA || :||:|| ||: ||||||| CAGCCCAGGGCUGGAGGGAGGAGAUUCCAGGUCAGAAUGUGAG Ambra1; Kiaa1736 mmu-miR-24 224 231 GACAAGGACGACU------------------------UGACUCGGU |||| ||| :||||||| CC-UUCCA--UGAUCUAGAGCCCAGAAGAACCACACUGCUGAGCCU Ambra1; Kiaa1736 mmu-miR-337 85 92 UUUCCGUAGUAUAUC--------------------CUCGACUU ||||||| GACCUCACAGCUGACUGGGAACUGUACACACAGAAGAGCUGAU Ambra1; Kiaa1736 mmu-miR-429 730 737 ------------------UGCCGUA-AUGGUCU--GUCAUAAU :| ||| ||: :| |||||||| CUCCACAAGGCCCUCCAUGCAGCACCUAUGGGUGUCAGUAUUAC Ambra1; Kiaa1736 mmu-miR-483 643 650 -------------UGUUCUGCC-CUCC-CC-----UCCUCACU ||| | || || || |||||||: GAAUGGAGUCAAUACAUGGUGGUGAACAGGUCCUCAGGAGUGGG Ambra1; Kiaa1736 mmu-miR-484 226 233 UAGCCCUCCCC---------------------UGACUCGGACU :|||||||||: UUCCAUGAUCUAGAGCCCAGAAGAACCACACUGCUGAGCCUGGU Ambra1; Kiaa1736 mmu-miR-485-5p 483 490 CUUAAGUAGUGCC-----------------------GGUCGGAGA ||| | ||||||||| CCC--CAUUGCUUCCAUCUCUAAACCUUCCAGAGUUCCAGCCUCUC Ambra1; Kiaa1736 mmu-miR-7 342 349 -----------------------GUUGUUUUAGUGAUCAGAAGGU ||: |:|:| ||||||||| CAAACAACCCUGGGCAGAAGCCCCAGAAGAGUAA--AGUCUUCCAG Ambra1; Kiaa1736 mmu-miR-712 579 586 ---------------------CCA-UGGCGGGCC-CACUUCCUC || ||| : :|| |||||||| UGACUUAUGCUCACCAAAUGCGGACACC-UGUGGAGUGAAGGAA Ambra1; Kiaa1736 mmu-miR-762 756 763 CGAG--ACAGGG---------------CCGG----GGUCGGGG |||| |||| ||||||| UAUGGGUGUCAGUAUUACCUAAGCAUAGGCCAAAGCCAGCCCA Ambra1; Kiaa1736 mmu-miR-7b 342 349 UU---------------------GUUUUAGUG-UUCAGAAGGU ||:|| |||||||||| CAAACAACCCUGGGCAGAAGCCCCAGAAGAGUAAAGUCUUCCAG Ambra1; Kiaa1736 mmu-miR-9 987 994 GU--------------AUGUCGA------UCUAU-UGGUUUCU ||| ||| :|| |||||||| AGGAGAGGGGAUAGUCUACUGCUAAUGAGGGAGACACCAAAGAU Ambra1; Kiaa1736 mmu-let-7i 10 30 uguCGUGUUUGAUGAUGGAGU |||| ::: || ||||| gagGCACTGGTACCTCCCTCA Ambra1; Kiaa1736 mmu-miR-101b 54 75 gaaGUCGAUAGUGUCAUGACAU |||||: | :| |||||| tcaCAGCTGACTGGGAACTGTA Ambra1; Kiaa1736 mmu-miR-107 9 37 ACUAUCGGGA-CAUG------UUACGACGA ||| :|| || |||| | |||||| TGA-GGCACTGGTACCTCCCTCAAGCTGCT Ambra1; Kiaa1736 mmu-miR-10a 604 628 GUGUUUAAGCCUAG--AUGUCCCAu ||||:| | | :|| |||| ||| CACAGAATGGAGTCAATACATGGTg Ambra1; Kiaa1736 mmu-miR-125a 138 164 GUGUCCAAUUUCC----CAGAGUCCCu || || |||:|| ||| |||| CAGTGGATAAGGGGGCAGTCCAAGGGg Ambra1; Kiaa1736 mmu-miR-125b 619 647 agUGUUCAAUC------CCA-GAGUCCcu ||| | |:| ||| |||||| atACATGGTGGTGAACAGGTCCTCAGGag Ambra1; Kiaa1736 mmu-miR-136 590 616 aGGUAGUA---GUUUUGU-UUACCUCA || | | ::| ||| |||||||| gCCTGCTTGCCTGACACAGAATGGAGT Ambra1; Kiaa1736 mmu-miR-140 403 424 GAUGGUAUCCCAUUUUGGUGac ||||:: |||| ||:|||| CTACTGGAGGGACAAGCCACca Ambra1; Kiaa1736 mmu-miR-140* 156 182 AGG--CACC---AAGAUGGGACACCAU ||| | || ||: |||| |||| TCCAAGGGGCAAGGCTGGCCTGGGGTA Ambra1; Kiaa1736 mmu-miR-143 444 466 acucgauGUCACGAA-GUAGAGu || ||||| |||||| cccccccCATTGCTTCCATCTCt Ambra1; Kiaa1736 mmu-miR-145 146 175 UUCCC---UAAGG--ACCC-UUUUGACCug ||||| | ||| ||| ||::|||| AAGGGGGCAGTCCAAGGGGCAAGGCTGGcc Ambra1; Kiaa1736 mmu-miR-146 375 394 uuggguACCUUAAGUCAAGAGu |||:| |||||||| gaatggTGGGA--CAGTTCTCc Ambra1; Kiaa1736 mmu-miR-146b 375 394 ucggauACCUUAAGUCAAGAGu |||:| |||||||| gaatggTGGGA--CAGTTCTCc Ambra1; Kiaa1736 mmu-miR-149 121 141 cCUCACUUCUGUGCCUCGGUCu |:||| :|:||:|||||||| aGGGTG-GGGCATGGAGCCAGt Ambra1; Kiaa1736 mmu-miR-150 932 954 GUGACCAUGU-UCCCAACCCUCu ||: | ||| | | |||||| CATAGAAACATTGTGGTGGGAGg Ambra1; Kiaa1736 mmu-miR-15b 809 828 ACAUUUGGUACUACACGACGau |||:| : ||| |||:||| TGTGA--TTTGAGGTGTTGCat Ambra1; Kiaa1736 mmu-miR-16 805 828 gCGGUUA-UAAA-UGCACGACGau |:| :| |||| | |||:||| gGTCTGTGATTTGAGGTGTTGCat Ambra1; Kiaa1736 mmu-miR-181b 705 730 GGGUGG-CUGUCGU---UACUUACAa ||| || :||||| |||::||| CCCTCCATGCAGCACCTATGGGTGTc Ambra1; Kiaa1736 mmu-miR-181d 703 730 uuGGGUGG-CUGUUGU---UACUUACAa ||| || :||:|| |||::||| ggCCCTCCATGCAGCACCTATGGGTGTc Ambra1; Kiaa1736 mmu-miR-185 480 498 cuuGACGGAAAGAG-AGGu | |||| |||| ||| ttcCAGCCTCTCTCATCCt Ambra1; Kiaa1736 mmu-miR-193 647 665 gACCCUGAAACAUCCGGUCaa ||||: |||||||::| gTGGGG--GTGTAGGCTGGcc Ambra1; Kiaa1736 mmu-miR-196a 713 741 gGUUGUUG-UACUU-------UGAUGGAU ||:|| | |||:: |:|||||| gCAGCACCTATGGGTGTCAGTATTACCTA Ambra1; Kiaa1736 mmu-miR-200b 708 737 caGUA-GUAAUGG---UCC---GUCAUAAU ||| || ||| :|| |||||||| tcCATGCAGCACCTATGGGTGTCAGTATTA Ambra1; Kiaa1736 mmu-miR-200c 709 737 GGUA-GUAAUGGG---CC---GUCAUAAU |||| || |||: || |||||||| CCATGCAGCACCTATGGGTGTCAGTATTA Ambra1; Kiaa1736 mmu-miR-205 564 585 GUCUGAGGCCACCUUACUUCCU |:||| || |||||:||||||| CGGACACCTGTGGAGTGAAGGA Ambra1; Kiaa1736 mmu-miR-207 762 780 cUCCCUCCUCUCGGUCCUCUUCg |||| | ||| ||||:|| cAGGGCTG-GAG---GGAGGAGa Ambra1; Kiaa1736 mmu-miR-210 56 82 aGUCGGC-GACAGU----GUGCGUGUC ||||:| ||| | :|| ||||| aCAGCTGACTGGGAACTGTACACACAG Ambra1; Kiaa1736 mmu-miR-211 135 153 UCCGUUUCCUACUGUUUCCCuu || ||: |||| ||:||| AGCCAGTGGAT---AAGGGGgc Ambra1; Kiaa1736 mmu-miR-217 520 545 UAGGUC--AGUC-AAGGACUAC-GUCAu | :||| ||| |||| ||| |||| AGTCAGGCACAGCTTCC--ATGTCAGTg Ambra1; Kiaa1736 mmu-miR-218 511 531 UGUACCAAUCUAGUUCGUGUu | |||| | :|||:||||| AGATGGAAAAGTCAGGCACAg Ambra1; Kiaa1736 mmu-miR-219 374 391 UCUUAACGCAAACCUGUUAgu ||||| |:| |||||:| AGAATGGTG---GGACAGTtc Ambra1; Kiaa1736 mmu-miR-224 526 550 auuugccuuGGUG-A-UCACUGAAU |||: | ||||||||| gcacagcttCCATGTCAGTGACTTA Ambra1; Kiaa1736 mmu-miR-23a 776 799 CCUUUAGGGACC-G--UUACACUa |||:||:|| || | ||||||| GGAGATTCCAGGTCAGAATGTGAg Ambra1; Kiaa1736 mmu-miR-23b 776 799 CCAUUAGGGACC-G--UUACACUa || :||:|| || | ||||||| GGAGATTCCAGGTCAGAATGTGAg Ambra1; Kiaa1736 mmu-miR-24 212 231 gacaaggacGACUUGACUCGGu ||| ||||||| agaaccacaCTG--CTGAGCCt Ambra1; Kiaa1736 mmu-miR-24 170 191 GACAAGGACGACUUGA-CUCGGu ||| |||| | ||| ||||| CTG-GCCTGGGGTACTAGAGCCt Ambra1; Kiaa1736 mmu-miR-27b 46 70 CGUCUUGAA---UCGG-UGACACUU ||||:|| | |||: |||| ||| GCAGGACCTCACAGCTGACTGGGAA Ambra1; Kiaa1736 mmu-miR-291b-3p 1 19 cugUUUGUUUUACCUACGUGAaa |:||||||| || ||||| ---AGACAAAAT-GAGGCACTgg Ambra1; Kiaa1736 mmu-miR-296 110 133 ugUCCUAA--CUCCC-CCCCGgga |||| | ||||| ||||| ggAGGAATGAGAGGGTGGGGCatg Ambra1; Kiaa1736 mmu-miR-298 379 400 CCUUCUUGUCGGGAGGAGACGG || :|:||||::|||| ||||| GGTGGGACAGTTCTCCCCTGCC Ambra1; Kiaa1736 mmu-miR-29a 808 828 uuggCUAAAGUCUACCACGau ||||| ||:|| ||| ctgtGATTTGAGGTGTTGCat Ambra1; Kiaa1736 mmu-miR-300 79 101 cuUC-UCUCGAACGGGAACGUAu || |||||| : | ||||| acAGAAGAGCTGATGCCTGCATc Ambra1; Kiaa1736 mmu-miR-30a-3p 46 70 CGAC---GUUUGUAGGCUGACUUUc || | | ||| |:|||||::| GCAGGACCTCACAGCTGACTGGGAa Ambra1; Kiaa1736 mmu-miR-324-3p 709 735 GGU-CGUCGUGGA---CC-CCGUCAcc ||| ||||||||| || | |||| CCATGCAGCACCTATGGGTGTCAGTat Ambra1; Kiaa1736 mmu-miR-324-5p 287 308 gUGGUUACGGGAUCCCCUacgc |:|| || ||||||||| gATCACTGGCCTAGGGGActca Ambra1; Kiaa1736 mmu-miR-326 745 767 UGACCUCCUUC--CCGGGUCUCc |: || ||| ||||||:| ATAGGCCAAAGCCAGCCCAGGGc Ambra1; Kiaa1736 mmu-miR-326 766 792 uGACCUCCUUCC-C--GGGUC---UCc |||||||:||| | :|||| || gCTGGAGGGAGGAGATTCCAGGTCAGa Ambra1; Kiaa1736 mmu-miR-328 116 140 UGCCUUCCCGUCUC---UCCCGGUC |:| :||||::|:| :| ||||| ATGAGAGGGTGGGGCATGGAGCCAG Ambra1; Kiaa1736 mmu-miR-331 281 304 AAGAUCCUA-U--CCGGGUCCCCg | ||||||| | ||||:||||| TCCTAGGATCACTGGCCTAGGGGa Ambra1; Kiaa1736 mmu-miR-337 69 92 UUUCCGUAGUAUAUC--CUCGACUu || |:| || | || ||||||| AACTGTA-CACACAGAAGAGCTGAt Ambra1; Kiaa1736 mmu-miR-339 943 961 ACUCGAGGACCUCCUGUCCCu || | | |||||| |||| TGTGGT--GGGAGGAGAGGGg Ambra1; Kiaa1736 mmu-miR-342 770 800 CUGCCCACGCUAA-----AGAC--ACACUCu || || | |||| || | |||||| GAGGGAGGAGATTCCAGGTCAGAATGTGAGg Ambra1; Kiaa1736 mmu-miR-346 133 158 uCUCCGU--CC-GUGAGCCCGUCUGu ||| || || :| |||||| | gGAGCCAGTGGATAAGGGGGCAGTCc Ambra1; Kiaa1736 mmu-miR-365 144 169 UAUUCC----UAAAAAUCCCCGUaau |||||| | | ||||||| ATAAGGGGGCAGTCCAAGGGGCAagg Ambra1; Kiaa1736 mmu-miR-370 657 679 UUGGUCCAAGGUGGGGUCGUCCg |: | || | |||||||| | AGGCTGGCCCGCCCCCAGCATGt Ambra1; Kiaa1736 mmu-miR-376a* 950 971 gaguaUCU-UCCUCUUAGAUGg ||| :||| |:||||| ggaggAGAGGGGATAGTCTACt Ambra1; Kiaa1736 mmu-miR-378 759 779 uGUGUCCUGGACCUCAGUCCUC | ||||: |||||| ||||| gCCCAGGG-CTGGAGGGAGGAG Ambra1; Kiaa1736 mmu-miR-383 181 201 ucGGUGUCAGUGGAAG--ACUAGA |:| || ||||| |||||| taCTAGAG---CCTTCCATGATCT Ambra1; Kiaa1736 mmu-miR-423 164 190 gacUCC--CCGGAGUC--UGG-CUCGa ||| ||||| :| ||: |||| gcaAGGCTGGCCTGGGGTACTAGAGCc Ambra1; Kiaa1736 mmu-miR-429 710 737 ugcCGUAAUGG-U-----CUGUCAUAAU ||| ||| | | |||||||| catGCAGCACCTATGGGTGTCAGTATTA Ambra1; Kiaa1736 mmu-miR-433-5p 538 561 cuuaUUACUG--UCCGAGUGGcau |:|||| | ||||||| tgtcAGTGACTTATGCTCACCaaa Ambra1; Kiaa1736 mmu-miR-455-5p 511 532 gCUAC---AUCAGGUUUCCGUGUau |||| |||| ||||||| aGATGGAAAAGTC---AGGCACAgc Ambra1; Kiaa1736 mmu-miR-464 597 628 AUAGA--GUGUCUUA------UU-UGAACCAu |: || |||||||| || || |||| TGCCTGACACAGAATGGAGTCAATACATGGTg Ambra1; Kiaa1736 mmu-miR-465-3p 861 882 agaugaaucuUUCCGGGACUAG |||||:|||||| tggcgaaatcAAGGCTCTGATC Ambra1; Kiaa1736 mmu-miR-469 142 166 CCUGUGGUUCUAGUUACUUUCUCCGU |||:| ::|: ||:| |||:|||| GGATA-AGGGGGCAGTCCAAGGGGCA Ambra1; Kiaa1736 mmu-miR-470 143 163 agugguCACGGUCAGGUUCuu | | ||||||||| gataagGGGGCAGTCCAAGgg Ambra1; Kiaa1736 mmu-miR-483 621 650 UGUUCUGCC-C---UCC---CCUCCUCACu ||| |::|| | ||| ||||||| ACATGGTGGTGAACAGGTCCTCAGGAGTGg Ambra1; Kiaa1736 mmu-miR-483 761 782 uGUUCUGCCCUCCCCUCCUCacu ||:|:| ||| |||||||| cCAGGGCTGGA-GGGAGGAGatt Ambra1; Kiaa1736 mmu-miR-484 212 233 uagcccuccccuGACUCGGACu ||||||||| agaaccacactgCTGAGCCTGg Ambra1; Kiaa1736 mmu-miR-484 168 193 uaGCCC---UCCCCUGA-CUCGGAcu | || :||| ||| |||||| ggCTGGCCTGGGGTACTAGAGCCTtc Ambra1; Kiaa1736 mmu-miR-485-5p 469 490 cuuAAGUAGUGCC--GGUCGGAGA ||| || | ||||||||| accTTC--CAGAGTTCCAGCCTCT Ambra1; Kiaa1736 mmu-miR-485-5p 515 536 CUUAAGUAGUGCCG-GUCGGAGa |:| :||| ||| ||||:|| GGAAAAGTCA-GGCACAGCTTCc Ambra1; Kiaa1736 mmu-miR-489 713 733 CGACGGUAUAUACACCACAGUaa || | || |||| ||||||| GCAG-CACCTATG-GGTGTCAgt Ambra1; Kiaa1736 mmu-miR-490 770 790 gUCGUACCUCAGGAGGUCCAac || : |||| :||||||| gAGGGAGGAG-ATTCCAGGTca Ambra1; Kiaa1736 mmu-miR-490 741 768 gUCGUA-CC----UCAGG--AGGUCCaac ||||| || || || ||||| aAGCATAGGCCAAAG-CCAGCCCAGGgct Ambra1; Kiaa1736 mmu-miR-497 210 229 aUGUUUGGUGUCACACGACgac | :||||||| ||||| gAAGAACCACA--CTGCTGagc Ambra1; Kiaa1736 mmu-miR-501* 634 659 GUUUAGGA----ACGGGCCCACGUaa ||::|||| |: |||||:| CAGGTCCTCAGGAGTGGGGGTGTAgg Ambra1; Kiaa1736 mmu-miR-503 13 38 CGU---CAUGACAAGG---GCGACGAu ||| |||| | || |||||| GCACTGGTAC-CTCCCTCAAGCTGCTg Ambra1; Kiaa1736 mmu-miR-540 283 298 GGUCCUAGCUGGAGACUGGA |:|||||| | |||:||| CTAGGATC-A---CTGGCCT Ambra1; Kiaa1736 mmu-miR-546 545 560 CUGAGGCACG-GUGGUa |||| : ||| ||||| GACT-TATGCTCACCAa Ambra1; Kiaa1736 mmu-miR-592 998 1021 UGUAGUAG-CGUAUAACUGUGuua |||||||: ||: |||||| ACATCATTAAAATGATGACACgcc Ambra1; Kiaa1736 mmu-miR-615 751 771 uUCUCCCUCUGGGUCCGAGCCU | || || || :|||| ||| cAAAGCCAGCCCAGGGCT-GGA Ambra1; Kiaa1736 mmu-miR-652 307 333 acgUGUUGGGA----UCACCGCGGUaa |||||||| || || ||| caaACAACCCTGGGCAGAAGCCCCAga Ambra1; Kiaa1736 mmu-miR-666 648 669 ccgagagugucgacaCGGGCGa |||||| tgggggtgtaggctgGCCCGCc Ambra1; Kiaa1736 mmu-miR-669a 64 84 uguaCUUGUACGUGUGUGUuga |||| ||:||||||| ctggGAAC-TGTACACACAgaa Ambra1; Kiaa1736 mmu-miR-675-3p 115 136 UGACUCGCCAAUCCCGUAUGUC | |||| || |:||||||: || AATGAGAGGGTGGGGCATGGAG Ambra1; Kiaa1736 mmu-miR-675-5p 697 721 ugacacCCGGGA---AAGGCGUGGu |||||| | | ||||| ccacaaGGCCCTCCATGCAGCACCt Ambra1; Kiaa1736 mmu-miR-681 742 769 UCG-A--CGG--ACGGUC--GCUCCGAC ||| | ||| ||||| | :||||| AGCATAGGCCAAAGCCAGCCCAGGGCTG Ambra1; Kiaa1736 mmu-miR-682 47 69 GU-CUGAAGUGAC-ACUGACguc || ||| |||| | |||||| CAGGACCTCACAGCTGACTGgga Ambra1; Kiaa1736 mmu-miR-687 89 109 AGUAACGACGUAAGGUCCUauc | || ||||| ||||||| TGATGCCTGCA-TCCAGGAaca Ambra1; Kiaa1736 mmu-miR-688 791 813 CUUAUUCAUCAG---CGGACGCU ||||: | :||| |:|||:|| GAATGTGAGGTCTTGGTCTGTGA Ambra1; Kiaa1736 mmu-miR-693-5p 641 662 cuuuugaaagCCUACA-CCGAC ||:||| ||||| tcaggagtggGGGTGTAGGCTG Ambra1; Kiaa1736 mmu-miR-696 504 533 GGGUGUC------------GUUCGUGUgcg ||||||| ||:||||| CCCACAGAGATGGAAAAGTCAGGCACAgct Ambra1; Kiaa1736 mmu-miR-697 636 657 agAGGUGUCCU-GGUCCUACAa ||| ||||| : :||:||| ggTCCTCAGGAGTGGGGGTGTa Ambra1; Kiaa1736 mmu-miR-7 330 349 GUUGUUUUAGUGAUCAGAAGGU ||: |:|:| | ||||||||| CAGAAGAGTAA--AGTCTTCCA Ambra1; Kiaa1736 mmu-miR-700 652 671 CCAC--CUGAGCCAAGGGCGcac |||| |:|| || ||||| GGTGTAGGCT-GG--CCCGCccc Ambra1; Kiaa1736 mmu-miR-701 845 867 AGGUAGAU--AAAGUCGCCGAUU | |:| || |||:||:||| || TACGTGTAGTTTTTAGTGGCGAA Ambra1; Kiaa1736 mmu-miR-702 105 130 CUCG-CC-CC--A-UUUCCCACCCgu || | || || | |:|||||||| GAACAGGAGGAATGAGAGGGTGGGgc Ambra1; Kiaa1736 mmu-miR-702 134 154 CUCG--CCCCAUUUCCCACCCGU |||| | || | | || ||||| GAGCCAGTGG-ATAAGG-GGGCA Ambra1; Kiaa1736 mmu-miR-702 157 181 cucgCCCCAUUUC--CC--ACCCgu |||| ||:| || |||| ccaaGGGGCAAGGCTGGCCTGGGgt Ambra1; Kiaa1736 mmu-miR-705 677 695 ACGGGUGGGGUGGAGGGUGG ||:||| :| | ||||| || TGTCCA-TCAAGCTCCCCCC Ambra1; Kiaa1736 mmu-miR-707 151 172 gCAUC-CGUUCGCCGUACUGAC | || |||| |||| |:||| gGCAGTCCAAGGGGCAAGGCTG Ambra1; Kiaa1736 mmu-miR-709 470 490 aGGAGGACGGA--GACGGAGg |:||| | | | ||||| cCTTCCAGAGTTCCAGCCTCt Ambra1; Kiaa1736 mmu-miR-712 565 586 CC-AUGGCGGGCCCACUUCCUc || ||| : | |||||||| GGACACCTGTGGAGTGAAGGAa Ambra1; Kiaa1736 mmu-miR-712 752 775 ccauGG-CGGG-CCC-ACUUCCuc || |||| ||| ||:||| aaagCCAGCCCAGGGCTGGAGGga Ambra1; Kiaa1736 mmu-miR-712* 642 665 GUUGUGGGCCCC-CA-CUGAGCGu ||: | : |||| || |:|| || CAGGAGTGGGGGTGTAGGCTGGCc Ambra1; Kiaa1736 mmu-miR-718 750 773 GCUGUGGGCCGG--CCCG-CCUUC | | | || ||| |||| |||:| CCAAAGCCAGCCCAGGGCTGGAGG Ambra1; Kiaa1736 mmu-miR-744 659 676 CGACAAUCGGGAUCGGGG--CGU |||| |||| ||||| ||| GCTG---GCCC--GCCCCCAGCA Ambra1; Kiaa1736 mmu-miR-762 738 763 cGAGACAGGGCCGG----GGUCGGGg || | : |||| ||||||| cCTAAGCATAGGCCAAAGCCAGCCCa Ambra1; Kiaa1736 mmu-miR-762 657 678 cgaGACAGGGCCGGGGUCGggg ||| |||| ||||||| aggCTGGCCCGCCCCCAGCatg Ambra1; Kiaa1736 mmu-miR-763 12 36 CGGUGACCAAGAAG---GGUCGACc | ||||||| | || | ||||| GGCACTGGTACCTCCCTCAAGCTGc Ambra1; Kiaa1736 mmu-miR-7b 330 349 uUGUUUUAGUGUUCAGAAGGU | ||:| :| |||||||||| cAGAAGAGTA-AAGTCTTCCA Ambra1; Kiaa1736 mmu-miR-804 421 445 aGGUCC---ACUCCUUGUUGAGUGu ||||| |||||:|||| | | aCCAGGAGCAGAGGAGCAACACCCc Ambra1; Kiaa1736 mmu-miR-9 966 994 guAUGUCGAU------CUAU-UGGUUUCU ||| |||| || | |||||||| tcTACTGCTAATGAGGGAGACACCAAAGA

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Ambra1 RAID00007044 mmu-miR-29b-3p miRNA MIMAT0000127 Ambra1 mRNA 228361 Prediction 0.1828 Ambra1 RAID00111809 mmu-miR-6929-3p miRNA MIMAT0027759 Ambra1 mRNA 228361 Prediction 0.1828 Ambra1 RAID00129517 mmu-miR-667-5p miRNA MIMAT0017239 Ambra1 mRNA 228361 Prediction 0.1828 Ambra1 RAID00153357 mmu-miR-148b-3p miRNA MIMAT0000580 Ambra1 mRNA 228361 Prediction 0.1828 Ambra1 RAID00202584 mmu-miR-224-5p miRNA MIMAT0000671 Ambra1 mRNA 228361 Prediction 0.1828 Ambra1 RAID00382748 mmu-miR-6361 miRNA MIMAT0025104 Ambra1 mRNA 228361 Prediction 0.1828 Ambra1 RAID00420727 mmu-miR-488-3p miRNA MIMAT0003450 Ambra1 mRNA 228361 Prediction 0.1828 Ambra1 RAID00674012 mmu-miR-361-5p miRNA MIMAT0000704 Ambra1 mRNA 228361 Prediction 0.1828 Ambra1 RAID00683116 mmu-miR-7a-5p miRNA MIMAT0000677 Ambra1 mRNA 228361 Prediction 0.1828 Ambra1 RAID00906656 mmu-miR-344b-5p miRNA MIMAT0014925 Ambra1 mRNA 228361 Prediction 0.1828 Ambra1 RAID00957579 mmu-miR-200b-3p miRNA MIMAT0000233 Ambra1 mRNA 228361 Prediction 0.1828 Ambra1 RAID00972172 mmu-miR-6919-3p miRNA MIMAT0027739 Ambra1 mRNA 228361 Prediction 0.1828 Ambra1 RAID00996178 mmu-miR-8118 miRNA MIMAT0031424 Ambra1 mRNA 228361 Prediction 0.1828 Ambra1 RAID01007620 mmu-miR-31-5p miRNA MIMAT0000538 Ambra1 mRNA 228361 Prediction 0.1828 Ambra1 RAID01085740 mmu-miR-145a-3p miRNA MIMAT0004534 Ambra1 mRNA 228361 Prediction 0.1828 Ambra1 RAID01136003 mmu-miR-721 miRNA MIMAT0003515 Ambra1 mRNA 228361 Prediction 0.1828 Ambra1 RAID01226970 mmu-miR-7119-3p miRNA MIMAT0028136 Ambra1 mRNA 228361 Prediction 0.1828 Ambra1 RAID01245119 mmu-miR-107-3p miRNA MIMAT0000647 Ambra1 mRNA 228361 Prediction 0.1828 Ambra1 RAID01250509 mmu-miR-6914-3p miRNA MIMAT0027729 Ambra1 mRNA 228361 Prediction 0.1828 Ambra1 RAID01320728 mmu-miR-494-3p miRNA MIMAT0003182 Ambra1 mRNA 228361 Prediction 0.1828 Ambra1 RAID01367260 mmu-miR-7679-5p miRNA MIMAT0029872 Ambra1 mRNA 228361 Prediction 0.1828 Ambra1 RAID01402780 mmu-miR-7648-3p miRNA MIMAT0029799 Ambra1 mRNA 228361 Prediction 0.1828 Ambra1 RAID01489234 mmu-miR-344-5p miRNA MIMAT0017038 Ambra1 mRNA 228361 Prediction 0.1828 Ambra1 RAID01519224 mmu-miR-143-3p miRNA MIMAT0000247 Ambra1 mRNA 228361 Prediction 0.1828 Ambra1 RAID01541663 mmu-miR-296-3p miRNA MIMAT0004576 Ambra1 mRNA 228361 Prediction 0.1828 Ambra1 RAID01676134 mmu-miR-582-5p miRNA MIMAT0005291 Ambra1 mRNA 228361 Prediction 0.2202 Ambra1 RAID01689132 mmu-miR-6410 miRNA MIMAT0025163 Ambra1 mRNA 228361 Prediction 0.1828 Ambra1 RAID01698581 mmu-miR-6940-5p miRNA MIMAT0027780 Ambra1 mRNA 228361 Prediction 0.1828 Ambra1 RAID01774375 mmu-miR-381-3p miRNA MIMAT0000746 Ambra1 mRNA 228361 Prediction 0.1828 Ambra1 RAID01837358 mmu-miR-6921-5p miRNA MIMAT0027742 Ambra1 mRNA 228361 Prediction 0.2202 Ambra1 RAID01858935 mmu-miR-495-3p miRNA MIMAT0003456 Ambra1 mRNA 228361 Prediction 0.1828 Ambra1 RAID01879052 mmu-miR-532-3p miRNA MIMAT0004781 Ambra1 mRNA 228361 Prediction 0.1828 Ambra1 RAID02078262 mmu-miR-200c-3p miRNA MIMAT0000657 Ambra1 mRNA 228361 Prediction 0.1828 Ambra1 RAID02112892 mmu-miR-1192 miRNA MIMAT0005850 Ambra1 mRNA 228361 Prediction 0.1828 Ambra1 RAID02291017 mmu-miR-6369 miRNA MIMAT0025113 Ambra1 mRNA 228361 Prediction 0.1828 Ambra1 RAID02398055 mmu-miR-29c-3p miRNA MIMAT0000536 Ambra1 mRNA 228361 Prediction 0.1828 Ambra1 RAID02407350 mmu-miR-335-3p miRNA MIMAT0004704 Ambra1 mRNA 228361 Prediction 0.1828 Ambra1 RAID02430842 mmu-miR-1956 miRNA MIMAT0009428 Ambra1 mRNA 228361 Prediction 0.1828 Ambra1 RAID02447785 mmu-miR-32-5p miRNA MIMAT0000654 Ambra1 mRNA 228361 Prediction 0.1828 Ambra1 RAID02503889 mmu-miR-23b-3p miRNA MIMAT0000125 Ambra1 mRNA 228361 Prediction 0.2381 Ambra1 RAID02597945 mmu-miR-429-3p miRNA MIMAT0001537 Ambra1 mRNA 228361 Prediction 0.1828 Ambra1 RAID02601871 mmu-miR-25-3p miRNA MIMAT0000652 Ambra1 mRNA 228361 Prediction 0.1828 Ambra1 RAID02800441 mmu-miR-23a-3p miRNA MIMAT0000532 Ambra1 mRNA 228361 Prediction 0.2202 Ambra1 RAID02811044 mmu-miR-344d-1-5p miRNA MIMAT0014819 Ambra1 mRNA 228361 Prediction 0.1828 Ambra1 RAID02857032 mmu-miR-5123 miRNA MIMAT0020633 Ambra1 mRNA 228361 Prediction 0.1828 Ambra1 RAID02877444 mmu-miR-700-5p miRNA MIMAT0017256 Ambra1 mRNA 228361 Prediction 0.1828 Ambra1 RAID02957558 mmu-miR-411-5p miRNA MIMAT0004747 Ambra1 mRNA 228361 Prediction 0.1828 Ambra1 RAID03310212 mmu-miR-6413 miRNA MIMAT0025166 Ambra1 mRNA 228361 Prediction 0.1828 Ambra1 RAID03328465 mmu-miR-103-3p miRNA MIMAT0000546 Ambra1 mRNA 228361 Prediction 0.1828 Ambra1 RAID03340549 mmu-miR-344c-5p miRNA MIMAT0014927 Ambra1 mRNA 228361 Prediction 0.1828 Ambra1 RAID03346671 mmu-miR-762 miRNA MIMAT0003892 Ambra1 mRNA 228361 Prediction 0.1828 Ambra1 RAID03599919 mmu-miR-485-5p miRNA MIMAT0003128 Ambra1 mRNA 228361 Prediction 0.1828 Ambra1 RAID03607175 mmu-miR-5124b miRNA MIMAT0025136 Ambra1 mRNA 228361 Prediction 0.1828 Ambra1 RAID03668227 mmu-miR-24-3p miRNA MIMAT0000219 Ambra1 mRNA 228361 Prediction 0.2202 Ambra1 RAID03675599 mmu-miR-7070-5p miRNA MIMAT0028046 Ambra1 mRNA 228361 Prediction 0.1828 Ambra1 RAID03709750 mmu-miR-9-5p miRNA MIMAT0000142 Ambra1 mRNA 228361 NGS (Next Generation Sequencing)//Prediction 0.6592 Ambra1 RAID03748395 mmu-miR-7b-5p miRNA MIMAT0000678 Ambra1 mRNA 228361 Prediction 0.2202 Ambra1 RAID03764435 mmu-miR-6983-5p miRNA MIMAT0027868 Ambra1 mRNA 228361 Prediction 0.1828 Ambra1 RAID03788168 mmu-miR-29a-3p miRNA MIMAT0000535 Ambra1 mRNA 228361 Prediction 0.1828 Ambra1 RAID03791858 mmu-miR-7682-3p miRNA MIMAT0029885 Ambra1 mRNA 228361 Prediction 0.1828 Ambra1 RAID03818017 mmu-miR-367-3p miRNA MIMAT0003181 Ambra1 mRNA 228361 Prediction 0.1828 Ambra1 RAID03881288 mmu-miR-383-5p miRNA MIMAT0000748 Ambra1 mRNA 228361 Prediction 0.2381 Ambra1 RAID03882942 mmu-miR-7024-3p miRNA MIMAT0027953 Ambra1 mRNA 228361 Prediction 0.1828 Ambra1 RAID03929061 mmu-miR-423-5p miRNA MIMAT0004825 Ambra1 mRNA 228361 Prediction 0.1828 Ambra1 RAID03938846 mmu-miR-130b-3p miRNA MIMAT0000387 Ambra1 mRNA 228361 Prediction 0.1828 Ambra1 RAID03952039 mmu-miR-136-5p miRNA MIMAT0000148 Ambra1 mRNA 228361 Prediction 0.1828 Ambra1 RAID04029937 mmu-miR-6927-5p miRNA MIMAT0027754 Ambra1 mRNA 228361 Prediction 0.1828