DNA & RNA Element - microRNA |
Mirbase Acc | miRNA Name | Gene ID | Gene Symbol | miRNA Alignment | Alignment | Gene Alignment | miRNA Start | miRNA End | Gene Start | Gene End | Genome Coordinates | Conservation | Align Score | Seed Cat | Energy | mirSVR Score |
MIMAT0000595 | mmu-miR-345-5p | 73162 | Otud3 | uucgugACCUGAUCCCCAGUCg | || ||: ||||||| | uuugugUGCCCUGUGGGUCAGa | 2 | 17 | 238 | 259 | [mm9:4:138451394-138451415:-] | 0.6219 | 152 | 7 | -17.89 | -0.6376 |
MIMAT0003731 | mmu-miR-671-5p | 73162 | Otud3 | gaggucggggagGUCCCGAAGGa | || ||||||| | cuacgcugcagaCAAGGCUUCCc | 2 | 12 | 31 | 53 | [mm9:4:138451600-138451622:-] | 0.5344 | 147 | 7 | -20.78 | -0.3429 |
MIMAT0015219 | mmu-miR-3475 | 73162 | Otud3 | aagUUUGGUACACGGAGG-UCu | | ||||| ||||| || | gugACACCAUUCACCUCCUAGa | 2 | 19 | 151 | 172 | [mm9:4:138451481-138451502:-] | 0.6056 | 122 | 0 | -18.12 | -0.6963 |
MIMAT0003487 | mmu-miR-697 | 73162 | Otud3 | agaggUGUCCUGGUCCUACAa | | ||| ||||||| | cccugAGAGGUGAAGGAUGUa | 2 | 17 | 9 | 29 | [mm9:4:138451624-138451644:-] | 0.5896 | 148 | 7 | -16.26 | -0.3267 |
MIMAT0003502 | mmu-miR-712 | 73162 | Otud3 | ccauggcgggcCCACUUCCUc | ||||||||| | gggcccugagaGGUGAAGGAu | 2 | 11 | 6 | 26 | [mm9:4:138451627-138451647:-] | 0.5896 | 150 | 7 | -21.74 | -0.1599 |
MIMAT0004863 | mmu-miR-220 | 73162 | Otud3 | uucACAGACUGUGACACCACc | ||| ||||: ||||||| | uguUGUGUGACGGUGUGGUGa | 2 | 19 | 134 | 154 | [mm9:4:138451499-138451519:-] | 0.6056 | 170 | 7 | -25.14 | -0.2757 |
MIMAT0004863 | mmu-miR-220 | 73162 | Otud3 | uuCACAGACUGUGACACCACc | ||| | | | ||||||| | cuGUGGGUCAGAGUGUGGUGg | 2 | 20 | 248 | 268 | [mm9:4:138451385-138451405:-] | 0.6219 | 155 | 7 | -19.48 | -0.1495 |
MIMAT0004888 | mmu-miR-493 | 73162 | Otud3 | ggacCGUGU--GUCAUC-CUGGAAGu | ||||| || ||| ||||||| | cucaGCACAAUCAUUAGAGACCUUCa | 2 | 20 | 325 | 350 | [mm9:4:138451303-138451328:-] | 0.6303 | 165 | 7 | -23.86 | -0.9694 |
MIMAT0005858 | mmu-miR-1197 | 73162 | Otud3 | ucuUCAUCUGGUACACAGGAu | || || ||| ||||||| | cacAGGAG-CCA-GUGUCCUu | 2 | 19 | 105 | 123 | [mm9:4:138451530-138451548:-] | 0.5779 | 154 | 7 | -19.80 | -0.3061 |
MIMAT0009392 | mmu-miR-1929 | 73162 | Otud3 | gagAC-GAGAU-AUUUCAGGAUCUu | || | | | | | ||||||| | uggUGACACCAUUCACCUCCUAGAa | 2 | 21 | 149 | 173 | [mm9:4:138451480-138451504:-] | 0.6056 | 142 | 7 | -16.87 | -0.5172 |
MIMAT0009401 | mmu-miR-1937a | 73162 | Otud3 | acccccGAGCAGGC-CCUAa | ||| |||| |||| | ccacacCUCCUCCGAGGAUg | 2 | 14 | 56 | 75 | [mm9:4:138451578-138451597:-] | 0.5466 | 121 | 0 | -15.64 | -0.1169 |
MIMAT0009437 | mmu-miR-1964 | 73162 | Otud3 | uuucgGCCUCGGGUCUUCAGCc | | || :|: ||||||| | uuguaCCGAUUCUUGAAGUCGc | 2 | 18 | 304 | 325 | [mm9:4:138451328-138451349:-] | 0.6303 | 153 | 7 | -18.57 | -0.5383 |
MIMAT0009444 | mmu-miR-1970 | 73162 | Otud3 | guuucggauagggGUCACUGUGu | ::||||||| | uugugugacggugUGGUGACACc | 2 | 11 | 136 | 158 | [mm9:4:138451495-138451517:-] | 0.6056 | 142 | 7 | -11.40 | -0.3158 |
MIMAT0011217 | mmu-miR-2141 | 73162 | Otud3 | uuGAAAAGAC--UGUGGAGGa | ||| | | |||||||| | ggCUUCCCAGCCACACCUCCu | 2 | 18 | 46 | 66 | [mm9:4:138451587-138451607:-] | 0.5344 | 148 | 7 | -19.18 | -0.1483 |
MIMAT0011217 | mmu-miR-2141 | 73162 | Otud3 | uugaaaagacuGUGGAGGa | ||||||| | gugacaccauuCACCUCCu | 2 | 9 | 151 | 169 | [mm9:4:138451484-138451502:-] | 0.6056 | 140 | 7 | -15.17 | -0.8972 |
MIMAT0014853 | mmu-miR-3072 | 73162 | Otud3 | ucuUCCGA--AGGACCUC-CCCCGu | ||||| || ||| ||||| | cauAGGCUGGUCACAGAGCGGGGCc | 2 | 20 | 189 | 213 | [mm9:4:138451440-138451464:-] | 0.5511 | 122 | 0 | -23.18 | -0.1909 |
MIMAT0015641 | mmu-miR-3470b | 73162 | Otud3 | ggucGGAC-CAGAUGUCUCACu | |||| | | ||||||| | gugcCCUGUGGGU-CAGAGUGu | 2 | 18 | 243 | 263 | [mm9:4:138451390-138451410:-] | 0.6219 | 146 | 7 | -19.52 | -0.2495 |
MIMAT0000159 | mmu-miR-149 | 73162 | Otud3 | cccUCACUUCUGUG-CCUCGGUCu | || ||: ||| |||||||| | cacAG-GAGCCCACAGGAGCCAGu | 2 | 21 | 95 | 117 | [mm9:4:138451536-138451558:-] | 0.5779 | 157 | 7 | -26.12 | -0.2161 |
MIMAT0000219 | mmu-miR-24 | 73162 | Otud3 | gacaaggacgacuUGACUCGGu | |||||||| | uagaacucaaaacACUGAGCCa | 2 | 10 | 169 | 190 | [mm9:4:138451463-138451484:-] | 0.6056 | 145 | 7 | -16.12 | -0.9114 |
MIMAT0000663 | mmu-miR-218 | 73162 | Otud3 | uguaccaaucuaguUCGUGUu | |||||| | ucuugaagucgcucAGCACAa | 2 | 8 | 314 | 334 | [mm9:4:138451319-138451339:-] | 0.6303 | 120 | 6 | -11.19 | -0.1171 |
MIMAT0000741 | mmu-miR-377 | 73162 | Otud3 | uguuUUCAACGGA--AACACACUa | ||| ||::| |||||||| | cuucAAGCUGUUUUGUUGUGUGAc | 2 | 19 | 121 | 144 | [mm9:4:138451509-138451532:-] | 0.6236 | 161 | 7 | -14.53 | -0.5279 |
MIMAT0003184 | mmu-miR-487b | 73162 | Otud3 | uuCACCUACUGGGACAU-GCUAa | ||||:| ||:|||| |||| | ggGUGGGU-UCCUUGUACCGAUu | 2 | 21 | 293 | 314 | [mm9:4:138451339-138451360:-] | 0.6303 | 134 | 0 | -26.31 | -0.3498 |