DNA & RNA Element - microRNA |
Mirbase Acc | miRNA Name | Gene ID | Gene Symbol | miRNA Alignment | Alignment | Gene Alignment | miRNA Start | miRNA End | Gene Start | Gene End | Genome Coordinates | Conservation | Align Score | Seed Cat | Energy | mirSVR Score |
MIMAT0000152 | mmu-miR-140* | 68350 | Mul1 | ggcaccaagaugGGACACCAu | :||||||| | ---------gggUCUGUGGUc | 2 | 10 | 1 | 12 | [mm9:4:137995596-137995607:+] | 0.6615 | 141 | 7 | -13.96 | -0.2027 |
MIMAT0004535 | mmu-miR-150* | 68350 | Mul1 | gauaggggGUCCG-GACAUG-GUc | ||||: |||||| || | gugcagugCAGGUGCUGUACACAc | 2 | 15 | 2104 | 2127 | [mm9:4:137997699-137997722:+] | 0.5001 | 121 | 0 | -17.62 | -0.1489 |
MIMAT0000371 | mmu-miR-293 | 68350 | Mul1 | ugUGAUGUU-U-GAGACG-CCGUGa | :|| ||| | || ||| ||||| | agGCUUCAAUACCUGUGCAGGCACc | 2 | 21 | 2165 | 2189 | [mm9:4:137997760-137997784:+] | 0.5002 | 126 | 0 | -18.74 | -0.3091 |
MIMAT0000371 | mmu-miR-293 | 68350 | Mul1 | ugUGAUGUU-U-GAGACG-CCGUGa | ||| ::| | || ||| ||||| | agACUUUGACACCUGUGCAGGCACc | 2 | 21 | 2130 | 2154 | [mm9:4:137997725-137997749:+] | 0.5002 | 122 | 0 | -17.44 | -0.2282 |
MIMAT0000376 | mmu-miR-298 | 68350 | Mul1 | ccCUUCUUGUCGGGA-----GGAGACGg | ||||| : :|:| ||||||| | auGAAGAUGGAUCUUGGAGACCUCUGCu | 2 | 22 | 1049 | 1076 | [mm9:4:137996644-137996671:+] | 0.5233 | 144 | 7 | -20.62 | -0.1977 |
MIMAT0004635 | mmu-miR-92a* | 68350 | Mul1 | cauuacggugguuaGGGGUGGa | ||||||| | aggaguuaaagcucCCCCACCa | 2 | 9 | 1023 | 1044 | [mm9:4:137996618-137996639:+] | 0.5195 | 140 | 7 | -17.17 | -0.1585 |
MIMAT0000551 | mmu-miR-323-3p | 68350 | Mul1 | ucuccagcUGGCACAUUACAc | ||: ||||||| | ccuuacuuACUUAGUAAUGUu | 2 | 14 | 469 | 489 | [mm9:4:137996064-137996084:+] | 0.4892 | 145 | 7 | -7.09 | -0.2982 |
MIMAT0004660 | mmu-miR-19a* | 68350 | Mul1 | caucACGUUGAUACGUUUUGAu | || | | ||||||| | aacaUGAAUGCACACAAAACUa | 2 | 19 | 1524 | 1545 | [mm9:4:137997119-137997140:+] | 0.4999 | 142 | 7 | -11.77 | -0.6152 |
MIMAT0000672 | mmu-miR-199b* | 68350 | Mul1 | cuuguccAUCAGA-UUUGUGACCc | | ||:| :|||||||| | augugucUUGUUUGGAACACUGGa | 2 | 17 | 1215 | 1238 | [mm9:4:137996810-137996833:+] | 0.4967 | 155 | 7 | -15.74 | -0.4026 |
MIMAT0002104 | mmu-miR-463* | 68350 | Mul1 | uaCUACCUGU--UGUUUAAUC-CAu | || | ||| | ||||||| || | guGA-GUACAAGAGAAAUUAGAGUc | 2 | 21 | 814 | 837 | [mm9:4:137996409-137996432:+] | 0.5156 | 121 | 0 | -9.87 | -0.1501 |
MIMAT0003127 | mmu-miR-484 | 68350 | Mul1 | uagccCUCCCCUG-ACUC-GGACu | |:| | || |||| |||| | uugcuGGGAGCACUUGAGACCUGg | 2 | 18 | 2285 | 2308 | [mm9:4:137997880-137997903:+] | 0.5004 | 120 | 0 | -24.78 | -0.1376 |
MIMAT0003129 | mmu-miR-485* | 68350 | Mul1 | cuCUC-CUCUCGG--CACAUACUGa | ||| ||| || ||||||||| | ggGAGCUAGAUCCAUGUGUAUGACu | 2 | 21 | 173 | 197 | [mm9:4:137995768-137995792:+] | 0.4846 | 162 | 7 | -24.93 | -0.2033 |
MIMAT0003171 | mmu-miR-542-5p | 68350 | Mul1 | agcacuguacuacUAGGGGCUc | |||||||| | cucucccucacccAUCCCCGAc | 2 | 10 | 790 | 811 | [mm9:4:137996385-137996406:+] | 0.5156 | 145 | 7 | -14.17 | -0.1007 |
MIMAT0003891 | mmu-miR-770-3p | 68350 | Mul1 | ggucgAGGUGCAGUCCGGGUGc | ||| | ||||||||| | ccccaUCCUCACCAGGCCCACa | 2 | 18 | 1109 | 1130 | [mm9:4:137996704-137996725:+] | 0.5058 | 161 | 7 | -27.43 | -0.1181 |
MIMAT0003895 | mmu-miR-764-3p | 68350 | Mul1 | ugucAACGGUGAUACCGGAGGa | || |: | |||||||| | cacuUUUCUUCCUUGGCCUCCu | 2 | 19 | 857 | 878 | [mm9:4:137996452-137996473:+] | 0.5156 | 154 | 7 | -20.43 | -0.2037 |
MIMAT0014815 | mmu-miR-3099* | 68350 | Mul1 | guucccGACCUUCCUUCGACc | ||||| ||||||| | ggaacaCUGGA--GAAGCUGa | 2 | 16 | 1228 | 1246 | [mm9:4:137996823-137996841:+] | 0.4967 | 152 | 7 | -18.09 | -0.2545 |
MIMAT0003457 | mmu-miR-680 | 68350 | Mul1 | ggggguAC-AGUCGUCUACGGg | || || :||||||| | ggagacUGAUCUAUAGAUGCCu | 2 | 16 | 2381 | 2402 | [mm9:4:137997976-137997997:+] | 0.5004 | 146 | 7 | -16.09 | -0.2848 |
MIMAT0003470 | mmu-miR-691 | 68350 | Mul1 | aaaAGACGGAGAGAAGUCCUUa | |||||| ||||||| | accUCUGCC-AGGAUCAGGAAc | 2 | 20 | 1680 | 1700 | [mm9:4:137997275-137997295:+] | 0.5008 | 149 | 7 | -18.27 | -0.1060 |
MIMAT0003476 | mmu-miR-669b | 68350 | Mul1 | ugUACGUGUACGUGUGUUUUGa | ||| | ||||||||||||| | acAUG-A-AUGCACACAAAACu | 2 | 21 | 1525 | 1544 | [mm9:4:137997120-137997139:+] | 0.4999 | 172 | 7 | -28.04 | -0.1980 |
MIMAT0003492 | mmu-miR-702 | 68350 | Mul1 | cucgccCCAUUUCCCACCCGu | ||||: ||||||| | aagaaaGGUAGCUGGUGGGCa | 2 | 16 | 743 | 763 | [mm9:4:137996338-137996358:+] | 0.5156 | 155 | 7 | -25.84 | -0.1062 |
MIMAT0003492 | mmu-miR-702 | 68350 | Mul1 | cucgccccauuucCCACCCGu | ||||||| | uugcuucugcucaGGUGGGCa | 2 | 9 | 353 | 373 | [mm9:4:137995948-137995968:+] | 0.4891 | 140 | 7 | -16.79 | -0.1145 |
MIMAT0003500 | mmu-miR-710 | 68350 | Mul1 | gaGUUGAGAGGGGUUC-UGAACc | :|::|: :::| || ||||| | ccUAGUUUAUUUCUAGUACUUGa | 2 | 21 | 2240 | 2262 | [mm9:4:137997835-137997857:+] | 0.5002 | 120 | 0 | -13.00 | -0.4127 |
MIMAT0003510 | mmu-miR-717 | 68350 | Mul1 | ucucuuCCAUAGAGACAGACUc | | |:| :||||||| | cuugcuGAUGUAGUUGUCUGAc | 2 | 17 | 1190 | 1211 | [mm9:4:137996785-137996806:+] | 0.4908 | 148 | 7 | -12.75 | -0.2128 |
MIMAT0004838 | mmu-miR-742* | 68350 | Mul1 | acUAAUCGUUGGUACACUCAu | || |:||: ||||||| | ccAUCCCCGACU-UGUGAGUa | 2 | 20 | 801 | 820 | [mm9:4:137996396-137996415:+] | 0.5156 | 149 | 7 | -16.94 | -0.2252 |
MIMAT0004839 | mmu-miR-743b-5p | 68350 | Mul1 | acUACCUGUGGUCAGACUUGu | :|||: ::|: ||||||| | ggGUGGGAGUCGUUCUGAACa | 2 | 20 | 2060 | 2080 | [mm9:4:137997655-137997675:+] | 0.5000 | 159 | 7 | -25.81 | -0.1185 |
MIMAT0004856 | mmu-miR-105 | 68350 | Mul1 | uggugUUCGUAGA-----CUCGUGAACc | |||| |:| ||||||||| | cuauaAAGCCUUUGCUGGGAGCACUUGa | 2 | 19 | 2274 | 2301 | [mm9:4:137997869-137997896:+] | 0.5003 | 153 | 7 | -19.83 | -0.1699 |
MIMAT0004884 | mmu-miR-466h | 68350 | Mul1 | augUGUGUUCGUGUACGUGUGu | | ||| | | |||||||| | guaAAACAUG-A-AUGCACACa | 2 | 20 | 1520 | 1539 | [mm9:4:137997115-137997134:+] | 0.4999 | 151 | 7 | -16.68 | -0.8386 |
MIMAT0004934 | mmu-miR-872 | 68350 | Mul1 | ggacuUGAUUGUUCAUUGGAa | || ||| |||||||| | cacuuACGAAC-AGUAACCUa | 2 | 17 | 2406 | 2425 | [mm9:4:137998001-137998020:+] | 0.5004 | 158 | 7 | -14.96 | -0.3160 |
MIMAT0004861 | mmu-miR-877 | 68350 | Mul1 | gggacGCGGUAGA-GGAGAUg | | || ||| |||||| | ucuccCUCCCUCUCCCUCUAu | 2 | 16 | 445 | 465 | [mm9:4:137996040-137996060:+] | 0.4627 | 123 | 6 | -23.41 | -0.1795 |
MIMAT0005833 | mmu-miR-669d | 68350 | Mul1 | ugUAUAUGUACGUGUGUG-UUCa | | :|:| ||:|||||| ||| | gcAGGUGC-UGUACACACUAAGa | 2 | 21 | 2111 | 2132 | [mm9:4:137997706-137997727:+] | 0.5001 | 130 | 0 | -20.55 | -0.2537 |
MIMAT0005836 | mmu-miR-1186 | 68350 | Mul1 | guAC-GGAAAU-UAAG--GUCGUGAg | || :|| || || | ||||||| | acUGAUCUAUAGAUGCCUCAGCACUu | 2 | 21 | 2385 | 2410 | [mm9:4:137997980-137998005:+] | 0.5004 | 149 | 7 | -18.73 | -0.1701 |
MIMAT0005836 | mmu-miR-1186 | 68350 | Mul1 | guacggaaauuaagGUCGUGAg | ||||||| | ucaggucauccaaaCAGCACUu | 2 | 9 | 840 | 861 | [mm9:4:137996435-137996456:+] | 0.5156 | 140 | 7 | -14.77 | -0.2396 |
MIMAT0005848 | mmu-miR-466j | 68350 | Mul1 | aaugUGUGUACGUGUACGUGUGu | | ||||| | |||||||| | gguaAAACAUG-A-AUGCACACa | 2 | 20 | 1519 | 1539 | [mm9:4:137997114-137997134:+] | 0.4999 | 159 | 7 | -21.60 | -0.8316 |
MIMAT0005849 | mmu-miR-1191 | 68350 | Mul1 | aucccgAUGUAUCAUUCUGAc | |||| | ||||||| | gugcugUACACACUAAGACUu | 2 | 16 | 2115 | 2135 | [mm9:4:137997710-137997730:+] | 0.5001 | 159 | 7 | -10.91 | -0.1081 |
MIMAT0005853 | mmu-miR-669e | 68350 | Mul1 | uacuuguACGUGUGUG-UUCUGu | ||:|||||| ||||| | caggugcUGUACACACUAAGACu | 2 | 16 | 2112 | 2134 | [mm9:4:137997707-137997729:+] | 0.5001 | 135 | 0 | -20.92 | -0.2090 |
MIMAT0005855 | mmu-miR-467h | 68350 | Mul1 | uguAUAUGUACGUG---UGUG-AAUa | |:|:|| |||| |||| ||| | accUGUGCAGGCACCAUACACAUUAa | 2 | 20 | 2140 | 2165 | [mm9:4:137997735-137997760:+] | 0.5002 | 126 | 0 | -14.00 | -0.1394 |
MIMAT0007876 | mmu-miR-1907 | 68350 | Mul1 | ugGAGGUCUAGGAGACG-ACGAg | :| :|| |:||:||| |||| | ccUUGUAGCUUCUUUGCUUGCUu | 2 | 21 | 714 | 736 | [mm9:4:137996309-137996331:+] | 0.5156 | 132 | 0 | -22.18 | -0.1344 |
MIMAT0009399 | mmu-miR-1935 | 68350 | Mul1 | ucucuaggCGGUCGGAGACGGa | ||| |||||||| | auuugggaGCCCACCUCUGCCa | 2 | 15 | 1668 | 1689 | [mm9:4:137997263-137997284:+] | 0.5008 | 154 | 7 | -24.66 | -0.1184 |
MIMAT0009425 | mmu-miR-1954 | 68350 | Mul1 | uugucccagagUGAGACGUCa | | ||||||| | caguaaccuagAGUCUGCAGa | 2 | 11 | 2416 | 2436 | [mm9:4:137998011-137998031:+] | 0.5004 | 142 | 7 | -13.99 | -0.1834 |
MIMAT0009427 | mmu-miR-669n | 68350 | Mul1 | ugUGUGUAGGUGUGUGUUUa | |||:: ::|||||||| | aaACAUGAAUGCACACAAAa | 2 | 19 | 1523 | 1542 | [mm9:4:137997118-137997137:+] | 0.4999 | 158 | 7 | -14.39 | -0.2341 |
MIMAT0009427 | mmu-miR-669n | 68350 | Mul1 | uguguGUAGGUGUGUGUUUa | | | :||||||||| | gucuuCCUGUACACACAAAg | 2 | 16 | 2448 | 2467 | [mm9:4:137998043-137998062:+] | 0.5004 | 155 | 7 | -13.08 | -0.1110 |
MIMAT0000162 | mmu-miR-152 | 68350 | Mul1 | gguUCAAGACAGUACGUG-ACu | ||| |||: ||||| || | cuuAGUAAUGUU-UGCACAUGu | 2 | 19 | 478 | 498 | [mm9:4:137996073-137996093:+] | 0.4892 | 120 | 0 | -13.90 | -0.1565 |
MIMAT0000211 | mmu-miR-182 | 68350 | Mul1 | gccacacucaaGAUGGUAACGGUUu | :|:|: ||||||| | agcuucuuugcUUGCUUUUGCCAAa | 2 | 15 | 720 | 744 | [mm9:4:137996315-137996339:+] | 0.5156 | 150 | 7 | -13.60 | -0.2876 |
MIMAT0000225 | mmu-miR-195 | 68350 | Mul1 | cgguuauaAAGACACG-ACGAu | |||| ||| |||| | cuuguagcUUCUUUGCUUGCUu | 2 | 14 | 715 | 736 | [mm9:4:137996310-137996331:+] | 0.5156 | 121 | 0 | -10.77 | -0.1331 |
MIMAT0000229 | mmu-miR-199a-5p | 68350 | Mul1 | cuuguccAUCAGA-CUUGUGACCc | | ||:| ||||||||| | augugucUUGUUUGGAACACUGGa | 2 | 17 | 1215 | 1238 | [mm9:4:137996810-137996833:+] | 0.4967 | 159 | 7 | -18.19 | -0.4026 |
MIMAT0000247 | mmu-miR-143 | 68350 | Mul1 | cucgaUGUCACGAAGUAGAGu | ||| | ||||||| | uacacACAAAG--UCAUCUCu | 2 | 17 | 2457 | 2475 | [mm9:4:137998052-137998070:+] | 0.5004 | 141 | 7 | -11.61 | -0.1852 |
MIMAT0000368 | mmu-miR-291a-3p | 68350 | Mul1 | cguGUGUUU-CACCUUCGUGAAa | :|:|:| | ||||||| | aucUAUAGAUGCCUCAGCACUUa | 2 | 20 | 2389 | 2411 | [mm9:4:137997984-137998006:+] | 0.5004 | 142 | 7 | -10.58 | -0.1272 |
MIMAT0000372 | mmu-miR-294 | 68350 | Mul1 | uguGUGUUUUC-CCUUCGUGAAa | :|:|:| | ||||||| | aucUAUAGAUGCCUCAGCACUUa | 2 | 20 | 2389 | 2411 | [mm9:4:137997984-137998006:+] | 0.5004 | 142 | 7 | -10.27 | -0.1260 |
MIMAT0000373 | mmu-miR-295 | 68350 | Mul1 | ucuGA-GUUUUCAUCAUCGUGAAa | || :|:| | ||||||| | gauCUAUAGAUGCCUCAGCACUUa | 2 | 21 | 2388 | 2411 | [mm9:4:137997983-137998006:+] | 0.5004 | 143 | 7 | -9.35 | -0.1260 |
MIMAT0000380 | mmu-miR-302a | 68350 | Mul1 | agUGGUUUUGUAC--CUUCGUGAAu | |:| | | ||| ||||||| | ugAUCUAUAGAUGCCUCAGCACUUa | 2 | 22 | 2387 | 2411 | [mm9:4:137997982-137998006:+] | 0.5004 | 148 | 7 | -13.70 | -0.1247 |
MIMAT0000385 | mmu-miR-106a | 68350 | Mul1 | gauggacgugacaaUCGUGAAAc | |||||||| | caggucauccaaacAGCACUUUu | 2 | 10 | 841 | 863 | [mm9:4:137996436-137996458:+] | 0.5156 | 145 | 7 | -10.82 | -0.2135 |
MIMAT0000386 | mmu-miR-106b | 68350 | Mul1 | uagacgugacaGUCGUGAAAu | ||||||||| | ggucauccaaaCAGCACUUUu | 2 | 11 | 843 | 863 | [mm9:4:137996438-137996458:+] | 0.5156 | 150 | 7 | -14.67 | -0.2135 |
MIMAT0000513 | mmu-miR-19b | 68350 | Mul1 | agucaAAACGUACCUAAACGUGu | || |:| | ||||||| | cuuacUUAGUAAUG-UUUGCACa | 2 | 19 | 474 | 495 | [mm9:4:137996069-137996090:+] | 0.4892 | 148 | 7 | -12.64 | -0.2656 |
MIMAT0000529 | mmu-miR-20a | 68350 | Mul1 | gauggacguGAUAUUCGUGAAAu | | | |||||||| | caggucaucCAAACAGCACUUUu | 2 | 15 | 841 | 863 | [mm9:4:137996436-137996458:+] | 0.5156 | 146 | 7 | -11.62 | -0.2135 |
MIMAT0000533 | mmu-miR-26a | 68350 | Mul1 | ucGGAUAGGACCUAAUGAACUu | ::||| :| | ||||||| | agUUUAU-UUCUAGUACUUGAa | 2 | 21 | 2243 | 2263 | [mm9:4:137997838-137997858:+] | 0.5002 | 150 | 7 | -15.53 | -0.3196 |
MIMAT0000534 | mmu-miR-26b | 68350 | Mul1 | ugGAUAGGACUUAAUGAACUu | :||| :| | ||||||| | guUUAU-UUCUAGUACUUGAa | 2 | 20 | 2244 | 2263 | [mm9:4:137997839-137997858:+] | 0.5002 | 149 | 7 | -12.38 | -0.3196 |
MIMAT0000540 | mmu-miR-93 | 68350 | Mul1 | gauggacguGCUUGUCGUGAAAc | | ||||||||||| | caggucaucCAAACAGCACUUUu | 2 | 15 | 841 | 863 | [mm9:4:137996436-137996458:+] | 0.5156 | 162 | 7 | -16.08 | -0.2135 |
MIMAT0000649 | mmu-miR-17 | 68350 | Mul1 | gauggacgugacauUCGUGAAAc | |||||||| | caggucauccaaacAGCACUUUu | 2 | 10 | 841 | 863 | [mm9:4:137996436-137996458:+] | 0.5156 | 145 | 7 | -10.72 | -0.2135 |
MIMAT0000651 | mmu-miR-19a | 68350 | Mul1 | agucaAAACGUAUCUAAACGUGu | || |:| | :||||||| | cuuacUUAGUA-AUGUUUGCACa | 2 | 19 | 474 | 495 | [mm9:4:137996069-137996090:+] | 0.4892 | 152 | 7 | -11.78 | -0.2841 |
MIMAT0000741 | mmu-miR-377 | 68350 | Mul1 | ugUUUUCAACGGAAACACACUa | || : |||| ||||||| | guAAUGUUUGCACAUGUGUGAa | 2 | 21 | 482 | 503 | [mm9:4:137996077-137996098:+] | 0.4892 | 156 | 7 | -13.54 | -0.2154 |
MIMAT0003172 | mmu-miR-542-3p | 68350 | Mul1 | aaAGUCAAUAGUUAGACA-GUGu | ||| |:|| |||| ||| | gcUCACGUGUCUUCCUGUACACa | 2 | 21 | 2440 | 2462 | [mm9:4:137998035-137998057:+] | 0.5004 | 120 | 0 | -14.12 | -0.1643 |
MIMAT0003187 | mmu-miR-20b | 68350 | Mul1 | gauggacguGAUACUCGUGAAAc | | | |||||||| | caggucaucCAAACAGCACUUUu | 2 | 15 | 841 | 863 | [mm9:4:137996436-137996458:+] | 0.5156 | 146 | 7 | -10.52 | -0.2135 |
MIMAT0003374 | mmu-miR-302b | 68350 | Mul1 | gauGAU-UUUGUACCUUCGUGAAu | ||| |:|:: ||||||| | gauCUAUAGAUGCCUCAGCACUUa | 2 | 21 | 2388 | 2411 | [mm9:4:137997983-137998006:+] | 0.5004 | 147 | 7 | -13.43 | -0.1247 |
MIMAT0003377 | mmu-miR-302d | 68350 | Mul1 | ugUGAGUUUGUAC--CUUCGUGAAu | |: :| | ||| ||||||| | ugAUCUAUAGAUGCCUCAGCACUUa | 2 | 22 | 2387 | 2411 | [mm9:4:137997982-137998006:+] | 0.5004 | 144 | 7 | -12.98 | -0.1247 |
MIMAT0003513 | mmu-miR-505 | 68350 | Mul1 | ucUUUUGGUC---GUUCACA-ACUGc | ::|:|:|| || |||| |||| | ugGGAGCUAGAUCCAUGUGUAUGACu | 2 | 21 | 172 | 197 | [mm9:4:137995767-137995792:+] | 0.4846 | 123 | 0 | -17.28 | -0.1606 |