| DNA & RNA Element - microRNA | | Mirbase Acc | miRNA Name | Gene ID | Gene Symbol | miRNA Alignment | Alignment | Gene Alignment | miRNA Start | miRNA End | Gene Start | Gene End | Genome Coordinates | Conservation | Align Score | Seed Cat | Energy | mirSVR Score |
|---|
| MIMAT0000672 | mmu-miR-199b* | 216853 | Wrap53 | cuUGUCCAUCAGAUUUGUGACCc | | | | || | ||||||| | aaAGACUUUGUGU-CACACUGGa | 2 | 22 | 4 | 25 | [mm9:11:69375256-69375277:-] | 0.5601 | 143 | 7 | -14.49 | -0.9858 | | MIMAT0000229 | mmu-miR-199a-5p | 216853 | Wrap53 | cuUGUCCAUCAGACUUGUGACCc | | | | || | ||||||| | aaAGACUUUGUGU-CACACUGGa | 2 | 22 | 4 | 25 | [mm9:11:69375256-69375277:-] | 0.5601 | 143 | 7 | -14.49 | -0.9858 | |
| DNA & RNA Element - TRANSFAC | | Accession | AS | Description | Species | Entrez | Pubmed | Binding Info |
|---|
| G040512 | | Wrap53 | Mus musculus | 216853 | | | |
| DNA & RNA Element - RepTar | | Gene Name | miRNA | Begin | End | Profile |
|---|
| Wdr79 | mmu-miR-199a-5p | beg:10 | end:24 | pic:3' CTTGTCCATCAGACTTGTGACCC 5'& || ||| ||||||| &5' ------GT-GTC---ACACTGG- 3' | | Wdr79 | mmu-miR-199bstar | beg:4 | end:24 | pic:3' CTTGTC-CATCAGATTTGTGACCC 5'& .|| || ||| ||||||| &5' -GACTTTGT-GTC---ACACTGG- 3' | | Wdr79 | mmu-miR-542-3p | beg:6 | end:21 | pic:3' AAAGTCAATAGTTAGACAGTGT 5'& | | ||||||| &5' ----------CTTTGTGTCACA 3' | |
| DNA & RNA Element - RAID2 | | Gene Name | RAID ID | Interactor 1 | Category 1 | ID 1 | Interactor 2 | Category 2 | ID 2 | Methods | Score |
|---|
| Wrap53 | RAID02377845 | mmu-miR-199a-5p | miRNA | MIMAT0000229 | Wrap53 | mRNA | 216853 | Prediction | 0.1828 | |