Ubac2
DNA & RNA Element - microRNA
Mirbase AccmiRNA NameGene IDGene SymbolmiRNA AlignmentAlignmentGene AlignmentmiRNA StartmiRNA EndGene StartGene EndGenome CoordinatesConservationAlign ScoreSeed CatEnergymirSVR Score
MIMAT0000154mmu-miR-142-5p68889Ubac2ucauCACGAAAGAU-GAAAUAc || :|||||| |||||| gcauGUAUUUUCUAUCUUUAUu218167188[mm9:14:122419446-122419467:+]0.64291376-11.67-1.1998
MIMAT0004545mmu-miR-200b*68889Ubac2agGUU-ACGACG--GGUCAU-UCUAc ||| | |||| :||||| |||| ccCAACUCCUGCUUUCAGUACAGAUa221479504[mm9:14:122419758-122419783:+]0.44751300-18.21-0.3015
MIMAT0004578mmu-miR-300*68889Ubac2uguuuccuauuGGAGAGAAGUu ::|||||||| acuggguuuuuUUUCUCUUCAg212394415[mm9:14:122419673-122419694:+]0.49331477-19.21-0.7311
MIMAT0004617mmu-miR-148a*68889Ubac2ucagccUC-ACAGAGUCU-UGAAa || || :||||| |||| gaaaaaAGUUGCUUCAGAGACUUa217614637[mm9:14:122419893-122419916:+]0.49681230-12.16-0.3694
MIMAT0004618mmu-miR-196a*68889Ubac2aguccgucaaagAACAACGGCu | ||||||| uuaaauccaagaUGGUUGCCGu211115136[mm9:14:122419394-122419415:+]0.64291427-13.30-0.7973
MIMAT0004640mmu-miR-32568889Ubac2aacuauccuccacgaGUUAUUu |||||| ggugugugauacuuaCAAUAAa28941962[mm9:14:122420220-122420241:+]0.59731206-8.52-0.1362
MIMAT0002104mmu-miR-463*68889Ubac2uacUACCUGUUGUUUA-AUCCAu || ||: :||||| ||||| caaAUUGAU-GCAAAUCUAGGUg220923944[mm9:14:122420202-122420223:+]0.59731290-13.60-0.8711
MIMAT0004758mmu-miR-46368889Ubac2gaUGGAAUAUACCACAGAUAGu | | |:||| | |||||| uuAGCAUGUAU--UUUCUAUCu221164183[mm9:14:122419443-122419462:+]0.64291256-8.69-0.2959
MIMAT0004217mmu-miR-465a-3p68889Ubac2agaugaAUCUUUCCGGG-ACUAg ||||| | ||| |||| agguucUAGAAUGCCCCGUGAUg217521543[mm9:14:122419800-122419822:+]0.58411280-12.17-0.1611
MIMAT0002107mmu-miR-466a-3p68889Ubac2agaauacacacgcacaUACAUAu |||||| uugccauuaaauuagcAUGUAUu28153175[mm9:14:122419432-122419454:+]0.64291206-4.44-0.1737
MIMAT0002111mmu-miR-47068889Ubac2ugaGUGGUCACGG--UCAGGUUCUu |||: || |: | ||||||| auaCACU-GUCCUUAAAUCCAAGAu221104127[mm9:14:122419383-122419406:+]0.64291497-17.17-0.8448
MIMAT0004760mmu-miR-470*68889Ubac2agaagagucuuuccAUGACCaa |||||| uaucuuuauuuuuuUACUGGgc39179200[mm9:14:122419458-122419479:+]0.64291200-9.43-0.1064
MIMAT0003120mmu-miR-483*68889Ubac2uucUGCCCUCCCCUCCUCACu || |:| ||||||| gccACUUGGGCAAAGGAGUGa219582602[mm9:14:122419861-122419881:+]0.58411467-19.12-1.0233
MIMAT0003129mmu-miR-485*68889Ubac2cucuccucUCGG-CACAUACUGa |||| |||||||| ---cauccAGCCACUGUAUGACa215120[mm9:14:122419280-122419299:+]0.29271537-15.37-0.3255
MIMAT0003892mmu-miR-76268889Ubac2cgagacagggccGGGGUCGGGg | ||||||| cccuccauacacCACCAGCCCu211713734[mm9:14:122419992-122420013:+]0.43651427-21.93-0.1910
MIMAT0003737mmu-miR-666-5p68889Ubac2ccgAGAGUGUCG--ACACGGGCGa | | ||||: ||||||||| cugUAUGACAGUGAUGUGCCCGCc2201134[mm9:14:122419290-122419313:+]0.34051627-24.89-0.2448
MIMAT0003740mmu-miR-67468889Ubac2augugGUGAGGGUAGAGUCACg :|:|| |||||||||| guuugUAUUCACAUCUCAGUGa218415436[mm9:14:122419694-122419715:+]0.42551697-23.67-0.4624
MIMAT0003740mmu-miR-67468889Ubac2auGUGGUGAGGGUAGAGUCACg :||:: | : |||||||| uuUACUGGGCAUUUCUCAGUGu221191212[mm9:14:122419470-122419491:+]0.64291527-16.75-0.7081
MIMAT0003452mmu-miR-67868889Ubac2ggagGUCAGGA-A-CGUGGC-UCUg | ||::| | |||||| ||| guggCUGUUUUAUAGCACCGCAGAg219263287[mm9:14:122419542-122419566:+]0.58821200-17.45-0.3615
MIMAT0003474mmu-miR-69468889Ubac2gaAGUCCGU-UGUAAAAGuc |:| ||| ::|||||| aaUUA-GCAUGUAUUUUCua318162180[mm9:14:122419441-122419459:+]0.64291300-7.93-0.2204
MIMAT0004827mmu-miR-297b-3p68889Ubac2auacccauacacacaUACAUAu |||||| ugccauuaaauuagcAUGUAUu28154175[mm9:14:122419433-122419454:+]0.64291206-4.44-0.1688
MIMAT0003742mmu-miR-45568889Ubac2cacauauacgggcACCUGACg ||||||| acacuacucuguaUGGACUGg29378398[mm9:14:122419657-122419677:+]0.49331407-14.37-0.4864
MIMAT0003487mmu-miR-69768889Ubac2agaGGUGUCCUGGUCCUACAa |||: |::|| |||| uugCCAUUAAAUUAGCAUGUa219153173[mm9:14:122419432-122419452:+]0.64291220-12.00-0.2033
MIMAT0004850mmu-miR-883b-5p68889Ubac2acuGACGAUGGGU-AAGAGUCAu :| ||: || |||||||| uuuUUACUGGGCAUUUCUCAGUg220189211[mm9:14:122419468-122419490:+]0.64291547-18.49-0.6696
MIMAT0004850mmu-miR-883b-5p68889Ubac2acuGACGAUGGGU-AAGAGUCAu :|| ||::|| ||||||| aguUUG-UAUUCACAUCUCAGUg220414435[mm9:14:122419693-122419714:+]0.42551527-18.55-0.2744
MIMAT0004864mmu-miR-297a*68889Ubac2auacccauacacacaUACAUAu |||||| ugccauuaaauuagcAUGUAUu28154175[mm9:14:122419433-122419454:+]0.64291206-4.44-0.1688
MIMAT0004866mmu-miR-297c*68889Ubac2auacccauacacacaUACAUAu |||||| ugccauuaaauuagcAUGUAUu28154175[mm9:14:122419433-122419454:+]0.64291206-4.44-0.1688
MIMAT0004872mmu-miR-465b-3p68889Ubac2agaugaAUCUUUCCGGG-ACUAg ||||| | ||| |||| agguucUAGAAUGCCCCGUGAUg217521543[mm9:14:122419800-122419822:+]0.58411280-12.17-0.1611
MIMAT0004874mmu-miR-465c-3p68889Ubac2agaugaAUCUUUCCGGG-ACUAg ||||| | ||| |||| agguucUAGAAUGCCCCGUGAUg217521543[mm9:14:122419800-122419822:+]0.58411280-12.17-0.1611
MIMAT0004876mmu-miR-466b-3p68889Ubac2agaauacacacgcacaUACAUAu |||||| uugccauuaaauuagcAUGUAUu28153175[mm9:14:122419432-122419454:+]0.64291206-4.44-0.1737
MIMAT0005453mmu-miR-466b-3-3p68889Ubac2agaauacacacgcacaUACAUAa |||||| uugccauuaaauuagcAUGUAUu28153175[mm9:14:122419432-122419454:+]0.64291206-5.17-0.1737
MIMAT0004878mmu-miR-466c-3p68889Ubac2agaauacacacgcacaUACAUAu |||||| uugccauuaaauuagcAUGUAUu28153175[mm9:14:122419432-122419454:+]0.64291206-4.44-0.1737
MIMAT0004880mmu-miR-466e-3p68889Ubac2agaauacacacgcacaUACAUAu |||||| uugccauuaaauuagcAUGUAUu28153175[mm9:14:122419432-122419454:+]0.64291206-4.44-0.1737
MIMAT0004884mmu-miR-466h68889Ubac2auGUGUGUUCGUGUAC-GUGUGu || | |:|| ::|| ||||| cuCAGAAAGGC-UGUGUCACACu221361382[mm9:14:122419640-122419661:+]0.49331220-12.35-0.2858
MIMAT0004931mmu-miR-466d-3p68889Ubac2gauacacacgcacaUACAUAu |||||| gccauuaaauuagcAUGUAUu28155175[mm9:14:122419434-122419454:+]0.64291206-4.44-0.1737
MIMAT0005291mmu-miR-582-5p68889Ubac2ucauugaccaacUUGUUGACAu :|||||||| accgcagagagaGACAACUGUc211279300[mm9:14:122419558-122419579:+]0.48301467-10.78-0.2361
MIMAT0005834mmu-miR-466i68889Ubac2aucACACAUACACACACACAUa || || | ||||||: ugaUGCAAAUCUAGGUGUGUGa220928949[mm9:14:122420207-122420228:+]0.59731310-11.23-0.1053
MIMAT0005835mmu-miR-1-2-as68889Ubac2accuUACAUUUCUUCAUACAu || |||| || |||| ugccAU-UAAAUUAGCAUGUa218154173[mm9:14:122419433-122419452:+]0.64291230-6.04-0.1995
MIMAT0005851mmu-miR-119368889Ubac2cuaUCAUUUUGCCCACUGGAu :| |:: | ||||||| ggcGGCAGGCCAUGUGACCUc219343363[mm9:14:122419622-122419642:+]0.44851467-14.13-0.1247
MIMAT0005854mmu-miR-467g68889Ubac2uauauacacacacaUACAUAu |||||| gccauuaaauuagcAUGUAUu28155175[mm9:14:122419434-122419454:+]0.64291206-4.44-0.1720
MIMAT0007870mmu-miR-190068889Ubac2acuuccUGGUCUC-UCCCGCCGg ::|||:| |||||||| ccucacGUCAGGGAAGGGCGGCa217327349[mm9:14:122419606-122419628:+]0.40371597-28.58-0.1258
MIMAT0007873mmu-miR-189668889Ubac2gaggagugggugGUAGUCUCUc | ||||||| agaaaaaaguugCUUCAGAGAc211613634[mm9:14:122419892-122419913:+]0.49681427-10.25-0.3967
MIMAT0009402mmu-miR-193868889Ubac2cuggcUUGAUGUUCAGGGUGGc :|| :::: ||||||| gaggaGACGGUGGUUCCCACCa21883104[mm9:14:122419362-122419383:+]0.53951497-17.06-0.6071
MIMAT0009458mmu-miR-198168889Ubac2cggugcagAUUCGGGUCGGAAAUg ||||::: ||| ||| guaucaaaUAAGUUU-GCCAUUAa217140162[mm9:14:122419419-122419441:+]0.64291220-13.01-0.1061
MIMAT0011216mmu-miR-214068889Ubac2uggugGUUC--UAGACGUGGa :||| | ||||||| ucccgUAAGCAAACUGCACCg215871891[mm9:14:122420150-122420170:+]0.52861457-18.03-0.3075
MIMAT0011221mmu-miR-214568889Ubac2uuGGUCCGGGCUG-GGACGa :| | ||| || ||||| agUCUGCCCCAACUCCUGCu218472491[mm9:14:122419751-122419770:+]0.44751210-19.97-0.2578
MIMAT0000155mmu-miR-142-3p68889Ubac2agGUAUUUC--AUCCUUUGUGAUGu || |||| |: | ||||||| cuCAGAAAGGCUGUGUCACACUACu222361385[mm9:14:122419640-122419664:+]0.49331567-15.18-0.1158
MIMAT0000165mmu-miR-15568889Ubac2ugggGAUAGUGUUAAUCGUA-AUu | ||:| ||||||||| || uuugCCAUUA-AAUUAGCAUGUAu220152174[mm9:14:122419431-122419453:+]0.64291330-12.67-1.2664
MIMAT0000211mmu-miR-18268889Ubac2gcCACACUCA-AGAUGGU---AACGGUuu |||| ||| || | :| |||||| ccGUGU-AGUAUCAAAUAAGUUUGCCAuu324133160[mm9:14:122419412-122419439:+]0.64291350-13.00-0.1849
MIMAT0000212mmu-miR-18368889Ubac2ucacuuaagauggucACGGUAu |||||| aguaucaaauaaguuUGCCAUu28139160[mm9:14:122419418-122419439:+]0.64291206-8.47-0.2226
MIMAT0000567mmu-miR-32968889Ubac2uuuuuccaaUCGACCCACACAa | || ||||||| uugaugcaaAUCUAGGUGUGUg214927948[mm9:14:122420206-122420227:+]0.59731497-12.49-0.7875
MIMAT0004651mmu-miR-340-5p68889Ubac2uuaGUCAGAGUAACGAAAUAuu :| |:|| | |||||| augUAUUUUC-UAUCUUUAUuu320169189[mm9:14:122419448-122419468:+]0.64291290-5.40-0.1517
MIMAT0000590mmu-miR-342-3p68889Ubac2ugcccacGCUAAAGA-CACACUCu | | | || ||||||| agauaauCCAGUGCUGGUGUGAGg217500523[mm9:14:122419779-122419802:+]0.51581477-16.60-0.1018
MIMAT0000590mmu-miR-342-3p68889Ubac2ugcCCACGCUAAAG---ACACACUcu | ||| | | : ||||||| auuGAUGCAAAUCUAGGUGUGUGAua321926951[mm9:14:122420205-122420230:+]0.59731270-11.57-0.1244
MIMAT0000597mmu-miR-34668889Ubac2ucuccGUCCGUGAGCCCGUC-UGu ||| | :|| ||||| || accacCAGCCCUUCUGGCAGCACa219723746[mm9:14:122420002-122420025:+]0.46341260-18.20-0.1248
MIMAT0000657mmu-miR-200c68889Ubac2agguaGUAA-UGGGCCGU-CAUAAu |||| | :: ||| ||||| uuugcCAUUAAAUUAGCAUGUAUUu219152176[mm9:14:122419431-122419455:+]0.64291210-13.67-1.0570
MIMAT0000679mmu-miR-21768889Ubac2agGUCAGUCAAGGAC-UAC-GUCAu || ||| ||| ||| |||| --CAUCCAGCCACUGUAUGACAGUg222123[mm9:14:122419280-122419302:+]0.29271200-19.03-0.1362
MIMAT0004684mmu-miR-362-3p68889Ubac2acUUAGGAAC--UU--GUCCACACAa |||: || || :|||||||| caAAUUGAUGCAAAUCUAGGUGUGUg221923948[mm9:14:122420202-122420227:+]0.59731507-14.02-0.7911
MIMAT0000711mmu-miR-36568889Ubac2uauuccuAAAAAU-CCCCGUAAu |||||| ||||||| cuuuauuUUUUUACUGGGCAUUu216182204[mm9:14:122419461-122419483:+]0.64291587-12.13-0.9730
MIMAT0000741mmu-miR-37768889Ubac2uguuuucaacggaaACACACUa ||||||| gaugcaaaucuaggUGUGUGAu29929950[mm9:14:122420208-122420229:+]0.59731407-13.69-0.8248
MIMAT0001537mmu-miR-42968889Ubac2ugCCGUAA--UGGUCUGU-CAUAAu | |||| |::|| || ||||| uuGCCAUUAAAUUAG-CAUGUAUUu221153176[mm9:14:122419432-122419455:+]0.64291210-10.87-1.0362
MIMAT0003169mmu-miR-53968889Ubac2uguguGGUUCCUAUUAAAGAGg ::| |: ||||||| uuuuuUUACUGGGCAUUUCUCa218187208[mm9:14:122419466-122419487:+]0.64291417-11.79-0.5305
MIMAT0003513mmu-miR-50568889Ubac2ucuuUUGGUCGUUCACA-ACUGc | ||||| | ||| |||| ---cAUCCAGCCACUGUAUGACa219120[mm9:14:122419280-122419299:+]0.29271300-14.00-0.1539
MIMAT0004854mmu-miR-876-5p68889Ubac2aucacuAAGU-GUCUCU-UUAGGu |||| :| ||| ||||| ccugcuUUCAGUACAGAUAAUCCa217486509[mm9:14:122419765-122419788:+]0.44751230-16.01-0.2071
DNA & RNA Element - TRANSFAC
AccessionASDescriptionSpeciesEntrezPubmedBinding Info
G061918Ubac2Mus musculus6888919536157 0 0 R46384; MOUSE$UBAC2_01; Binding factors: mmu-miR-103-3p , mmu-miR-107-3p , mmu-miR-15a-5p , mmu-miR-15b-5p , mmu-miR-16-5p , mmu-miR-1906 , mmu-miR-1907 , mmu-miR-195a-5p , mmu-miR-322-5p , mmu-miR-497a-5p , mmu-miR-761 // 0 0 R46386; MOUSE$UBAC2_02; Binding factors: mmu-let-7a-5p , mmu-let-7b-5p , mmu-let-7c-5p , mmu-let-7e-5p , mmu-let-7f-5p , mmu-let-7g-5p , mmu-let-7i-5p , mmu-miR-672-5p , mmu-miR-98-5p
DNA & RNA Element - RepTar
Gene NamemiRNABeginEndProfile
Ubac2mmu-miR-483starbeg:586end:603pic:3' TTCTGCCCTCCCC--TCCTCACT 5'& ||| |||||||| &5' ---------GGGCAAAGGAGTGA 3'
Ubac2mmu-miR-191starbeg:300end:319pic:3' CCCTTGCTTTAGGTTCACGTCG 5'& |||. |.|||||||. &5' ------GAAGCTCGAGTGCAGT 3'
Ubac2mmu-miR-539beg:190end:208pic:3' TGTGTGGTTCCTATTAAAGAGG 5'& .|| .| ||||||| &5' ---TACTGGGC---ATTTCTC- 3'
Ubac2mmu-miR-582-5pbeg:286end:300pic:3' TCATTGACCAACT-TGTTGACAT 5'& || |||||||| &5' -----------GAGACAACTGT- 3'
Ubac2mmu-miR-3475beg:451end:467pic:3' AAGTTTGGTACACGGAGGTCT 5'& .|.|| ||||||| &5' ---GAGCCT----CCTCCAG- 3'
Ubac2mmu-miR-674beg:417end:436pic:3' ATGTGGTGAGGGTAGAGTCACG 5'& .|.|| |||||||||| &5' -----TATTCACATCTCAGTG- 3'
Ubac2mmu-miR-666-3pbeg:696end:715pic:3' TCGTCCGCTAGTGCGACGTCGG 5'& .||| .| |||||||| &5' ---GGGCCA--GC-CTGCAGCC 3'
Ubac2mmu-miR-546beg:20end:39pic:3' CTGA--GGCACGGTGGTA 5'& ||. || ||||||| &5' GATGTGCCC-GCCACCA- 3'
Ubac2mmu-miR-133abeg:39end:58pic:3' GTCGACCAACTTCCCCTGGTTT 5'& |||| ||| |||||||. &5' CAGCC---TGA---GGACCAAG 3'
Ubac2mmu-miR-133bbeg:40end:58pic:3' ATCGACCAACTTCCCCTGGTTT 5'& ||| ||| |||||||. &5' -AGCC---TGA---GGACCAAG 3'
Ubac2mmu-miR-365beg:186end:204pic:3' TATTCCTAAAAATC-CCCGTAAT 5'& |||||| ||||||| &5' -------TTTTTACTGGGCATT- 3'
Ubac2mmu-miR-1900beg:331end:349pic:3' ACTTCCTGGTCTC-TCCCGCCGG 5'& .|||.| |||||||| &5' -------TCAGGGAAGGGCGGC- 3'
Ubac2mmu-miR-1982.1beg:776end:786pic:3' GACACCCTCTTGTATCCCACTCT 5'& |||||||. &5' ---------------GGGTGAGG 3'
Ubac2mmu-miR-329beg:935end:948pic:3' TTTTTCCAATCGACCCACACAA 5'& || ||||||| &5' -----------CTAGGTGTGT- 3'
Ubac2mmu-miR-362-3pbeg:936end:948pic:3' ACTTAGGAACTTGTCCACACAA 5'& .|||||||| &5' ------------TAGGTGTGT- 3'
Ubac2mmu-miR-485starbeg:3end:20pic:3' CTCTCCTCTCGGC-ACATACTGA 5'& |||| |||||||| &5' --------AGCCACTGTATGAC- 3'
Ubac2mmu-miR-196astarbeg:126end:136pic:3' AGTCCGTCAAAGAACAACGGCT 5'& ||||||| &5' --------------GTTGCCG- 3'
Ubac2mcmv-miR-m01-1beg:396end:414pic:3' GGCAAGCTGCAAT---AAGAGGAGA 5'& ||| |||||.|| &5' ---------GTTTTTTTTCTCTTC- 3'
Ubac2mcmv-miR-m01-3starbeg:444end:464pic:3' CGGCACTTCGCTCGCAAGGAGC 5'& ||.| ||. .|||| ||||| &5' GCTG-GAGATGAGCC-TCCTC- 3'
Ubac2mcmv-miR-m108-1beg:347end:369pic:3' GCTGTGCTCGGTGGCAGTCTTT 5'& |.| | |. ||| ||||||| &5' -GGC-CATGTGACC-TCAGAAA 3'
Ubac2mcmv-miR-m108-1beg:611end:634pic:3' GCTGTGCTCGGTGGCAGTCTTT 5'& || ||. |. |||||.| &5' -GAAAAAAGTTGCT-TCAGAGA 3'
Ubac2mmu-let-7gstarbeg:633end:652pic:3' CGTTCCGTCA-CCGGACATGTCA 5'& .||| || ||||.||| &5' ------TAGTGGGGCTGTGCAG- 3'
Ubac2mmu-let-7gstarbeg:778end:804pic:3' CGTTCCGTCACCG--GACATGTCA 5'& | |||||||| ||||.||| &5' GTGAGGCAGTGCCCACTGTGCAG- 3'
Ubac2mmu-miR-1188beg:366end:383pic:3' AGGACCGGGTTGGAGTGTGGT 5'& |||. . ||||||.| &5' ----GGCTG--TGTCACACTA 3'
Ubac2mmu-miR-1188beg:703end:727pic:3' AGGAC--CGGGTTGGAGTGTGGT 5'& |||| |||| || .|||||| &5' -CCTGCAGCCCT-CCATACACCA 3'
Ubac2mmu-miR-125b-5pbeg:805end:815pic:3' AGTGTTCAATCCCAGAGTCCCT 5'& ||||||| &5' ---------------TCAGGGA 3'
Ubac2mmu-miR-135abeg:338end:357pic:3' AGTGTATCCTTATTTTTCGGTAT 5'& |||. |.|||||. &5' ------AGGGCGGC-AGGCCATG 3'
Ubac2mmu-miR-135bbeg:588end:612pic:3' AGTGTATCCTTACTTTTCGGTAT 5'& .|| ||||.|||| | ||| &5' --GCAAAGGAGTGAATTGGAATA 3'
Ubac2mmu-miR-138beg:711end:732pic:3' GCCGGACTAAGTGTTGTGGTCGA 5'& ||| .||| ||||||| &5' --GCCCTCCATACACCACCAGC- 3'
Ubac2mmu-miR-146abeg:61end:82pic:3' TTGGGTACCTTAAGTCAAGAGT 5'& |||| ||||||| &5' --CCCAGCACAGGT-GTTCTCA 3'
Ubac2mmu-miR-146bbeg:63end:82pic:3' TCGGATACCTTAAGTCAAGAGT 5'& ||| || ||||||| &5' AGCACA-GGT-----GTTCTCA 3'
Ubac2mmu-miR-1839-5pbeg:164end:185pic:3' GTTCTGGACAAGATAGATGGAA 5'& .| ||| .| ||||.||| &5' ----GCATGTATTTTCTATCTT 3'
Ubac2mmu-miR-185beg:389end:415pic:3' AGTCCTTGAC-----GGAAAGAGAGGT 5'& |.|||| ..|||||||.|| &5' ----GGACTGGGTTTTTTTTCTCTTCA 3'
Ubac2mmu-miR-1896beg:617end:634pic:3' GAGGAGTGGGTGGTAGTCTCTC 5'& | . |. ||||||| &5' ------AGTTGCT-TCAGAGA- 3'
Ubac2mmu-miR-1929beg:508end:532pic:3' GAGACGAG-ATATTTCAGGATCTT 5'& |||| |.|.|.||.|||||| &5' ---TGCTGGTGTGAGGTTCTAGAA 3'
Ubac2mmu-miR-1944beg:486end:503pic:3' TTAGTCTTGAACTGTAAGTCGTGTCTC 5'& .| |||||.||||| &5' ------------GCTTTCAGTACAGA- 3'
Ubac2mmu-miR-1944beg:57end:73pic:3' TTAGTCTTGAACTGTAAGTCGTGTCTC 5'& ||| ||||||||. &5' -----------GACCC-CAGCACAGG- 3'
Ubac2mmu-miR-1948beg:451end:471pic:3' GACATGCTCAC--GAGA-CGGATTT 5'& |.||| ||| |||||.| &5' ----ATGAGCCTCCTCCAGCCTAGA 3'
Ubac2mmu-miR-1968beg:833end:857pic:3' TCAGGTGGTAGGAATTGTCGACGT 5'& | . | | |.||||||.| &5' ---CTGTGAGCAAGAGCAGCTGTA 3'
Ubac2mmu-miR-1969beg:165end:185pic:3' TGGGTACAATTTCAGAGGTAGAA 5'& ||||| |.||.||||| &5' ---CATGTAT---TTTCTATCTT 3'
Ubac2mmu-miR-1970beg:930end:953pic:3' GTTTCGGATAGGGGT---CACTGTGT 5'& || |||. ||||.|| &5' ----GCAAATCTAGGTGTGTGATAC- 3'
Ubac2mmu-miR-1971beg:673end:690pic:3' AGAGTC-GGGTCGGAAATG 5'& ||||| |||.|||| &5' -CTCAGCCCCGGCCT---- 3'
Ubac2mmu-miR-1982starbeg:59end:83pic:3' GGAGGGGTCCTGG----GAGGGTT 5'& |||||| || .||.||| &5' ---CCCCAGCACAGGTGTTCTCAA 3'
Ubac2mmu-miR-201beg:380end:401pic:3' TTCTTGTTACGGAA-TGACTCAT 5'& || ||. ||||.|| &5' ----ACTCTGTATGGACTGGGT- 3'
Ubac2mmu-miR-204beg:430end:446pic:3' TCCGTATCCTACTGTTTCCCTT 5'& .|||||.|||||. &5' ---------GTGACAGAGGGAG 3'
Ubac2mmu-miR-20astarbeg:303end:319pic:3' GAAATTCACGAGCATTACGTCA 5'& ||||| |.|||||| &5' --------GCTCG-AGTGCAGT 3'
Ubac2mmu-miR-211beg:430end:446pic:3' TCCGTTTCCTACTGTTTCCCTT 5'& .|||||.|||||. &5' ---------GTGACAGAGGGAG 3'
Ubac2mmu-miR-2134beg:64end:85pic:3' CGTGGGGCAAAGGGTTCTG 5'& |||| |||.||||| &5' GCACAGGTGTTCTCAAGA- 3'
Ubac2mmu-miR-2140beg:29end:48pic:3' TGGTGGTTCTAGACGTGGA 5'& .|||||| ||| .||| &5' GCCACCAC-ATCA--GCCT 3'
Ubac2mmu-miR-216abeg:505end:526pic:3' AGTGTCAACGGTCG-ACTCTAAT 5'& || ||| ||| |. ||||.|| &5' TC-CAG-TGCTGGTGTGAGGTT- 3'
Ubac2mmu-miR-2183beg:81end:99pic:3' TCCTCCAGTCCCCAAGTT 5'& ||||| |.| ||||| &5' AGGAGA-CGGTGGTTC-- 3'
Ubac2mmu-miR-219beg:794end:811pic:3' TCTTAACGCAAACCTGTTAGT 5'& ||.| ||||.||| &5' -----TGTGCA--GACAGTCA 3'
Ubac2mmu-miR-223beg:918end:932pic:3' ACCCCATAAACTGTTTGACTGT 5'& || ||||.|||. &5' ---------TGTCAAATTGAT- 3'
Ubac2mmu-miR-23abeg:195end:215pic:3' CCTTTAGGGACCGTTACACTA 5'& ||. || || ||.||||. &5' GGGCATTTCT--CAGTGTGG- 3'
Ubac2mmu-miR-23bbeg:194end:214pic:3' CCATTAGGGACCGTTACACTA 5'& || || || ||.||||. &5' GGGCATTTCT--CAGTGTGG- 3'
Ubac2mmu-miR-25beg:298end:319pic:3' AGTCTGGC-TCT-GTTCACGTTAC 5'& |.| || |.||||||.| &5' -----CTGAAGCTCGAGTGCAGT- 3'
Ubac2mmu-miR-26bstarbeg:638end:660pic:3' CTCGGTTCATTACCTCTTGTCC 5'& |.||. ||. ||||.|||| &5' GGGCT--GTGCA-GAGAGCAGG 3'
Ubac2mmu-miR-292-3pbeg:192end:205pic:3' TGTGAGTTTTGGACCGCCGTGAAA 5'& ||| ||||.|| &5' -----------CTG--GGCATTT- 3'
Ubac2mmu-miR-296-3pbeg:708end:736pic:3' CCTCTC-GGAGGTG------GGTTGGGAG 5'& || ||||||. |||.||||. &5' ----AGCCCTCCATACACCACCAGCCCTT 3'
Ubac2mmu-miR-296-3pbeg:448end:470pic:3' CCT-CTCGGAGGTGGGTTGGGAG 5'& || |||||||| .|||.||. &5' -GATGAGCCTCC-TCCAGCCT-- 3'
Ubac2mmu-miR-3099starbeg:437end:458pic:3' GTTCC-CGACCTTCCTTCGACC 5'& |.|| ||||||. .||| &5' -AGGGAGCTGGAGATGAGC--- 3'
Ubac2mmu-miR-30bstarbeg:412end:434pic:3' CTGCATTTGTAGGTGTAGGGTC 5'& || ..||.||||||.||| &5' ---GTTTGTATTCACATCTCAG 3'
Ubac2mmu-miR-31starbeg:259end:280pic:3' CTACCGTTATACAACCGTATCGT 5'& |.|||| |||| .|||||| &5' GGTGGC----TGTTT-TATAGCA 3'
Ubac2mmu-miR-323-5pbeg:18end:38pic:3' CGCTTGCGCGGTGCCTGGTGGA 5'& |.| |.|.||| || ||||| &5' GTG-ATGTGCC-CG--CCACC- 3'
Ubac2mmu-miR-324-3pbeg:771end:792pic:3' TCGTCGTGGACCCCGTCACC 5'& |.||.. || ||||||| &5' -GTAGTGGGTGAGGCAGTG- 3'
Ubac2mmu-miR-326beg:463end:474pic:3' TGACCTCCTTCCCGGGTCTCC 5'& |||.|||| &5' ------------GCCTAGAG- 3'
Ubac2mmu-miR-330beg:453end:474pic:3' CGGATTCTGTGTCCGGGTCTCT 5'& |||| | || |||.|||| &5' GCCTCCT-C-CA-GCCTAGAG- 3'
Ubac2mmu-miR-330starbeg:381end:404pic:3' AGAGACGT-CCGGGACACGAAACG 5'& |||||.| || ||| |.||| &5' -CTCTGTATGGA-CTGGGTTTT-- 3'
Ubac2mmu-miR-338-3pbeg:496end:517pic:3' GTTGTTTTAGTGACTACGACCT 5'& |||.| | .|||||| &5' --ACAGATAATCCAGTGCTGG- 3'
Ubac2mmu-miR-343beg:425end:446pic:3' AGACCCG-TGTACTTCCCTCT 5'& ||| |. ||| .|||||| &5' TCTCAGTGACA--GAGGGAG- 3'
Ubac2mmu-miR-3473beg:776end:796pic:3' CCGACTCGGTAGAGAGGT 5'& || |||| || | ||| &5' GGGTGAGGCAGTGC-CCA 3'
Ubac2mmu-miR-34abeg:96end:114pic:3' TGTTGGTCGATTCTGTGACGGT 5'& ||| | ||||||.| &5' ----CCACCAT--ACACTGTC- 3'
Ubac2mmu-miR-34b-5pbeg:102end:114pic:3' TGTTAGTCGATTAATGTGACGGA 5'& |||||||.| &5' -------------TACACTGTC- 3'
Ubac2mmu-miR-34cbeg:102end:114pic:3' CGTTAGTCGATTGATGTGACGGA 5'& |||||||.| &5' -------------TACACTGTC- 3'
Ubac2mmu-miR-351beg:319end:341pic:3' GTCCGAGTTTCCCGAG-G-AGTCCCT 5'& ||||| ||| | ||||||| &5' ---GCTCATC---CTCACGTCAGGGA 3'
Ubac2mmu-miR-361beg:539end:563pic:3' CATGG--GGACCTC--TAAGACTATT 5'& |.|| |||||.| |||.|| &5' -TGCCTACCTGGGGTCATTTTG---- 3'
Ubac2mmu-miR-363beg:300end:319pic:3' ATGTCTACCTATGG---CACGTTAA 5'& || .|. |||||.| &5' --------GAAGCTCGAGTGCAGT- 3'
Ubac2mmu-miR-367beg:303end:319pic:3' AGTGGTAACGATTTCACGTTAA 5'& ||| .||||||.| &5' --------GCTCGAGTGCAGT- 3'
Ubac2mmu-miR-375beg:594end:614pic:3' AGTGCGCTCGGCTTG--CTTGTTT 5'& ||| .|||. |||.||| &5' ------GAG-TGAATTGGAATAAA 3'
Ubac2mmu-miR-376bbeg:822end:842pic:3' TTCACCTACAA-GGAGATACTA 5'& ||| || ||.||| &5' ----GGAGGCAGCCCCTGTGA- 3'
Ubac2mmu-miR-377beg:508end:522pic:3' TGTTTTCAACGGAAACACACTA 5'& |||. |||||| &5' --------TGCTG--GTGTGA- 3'
Ubac2mmu-miR-378starbeg:324end:340pic:3' TGTGTCCTGGACCTCAGTCCTC 5'& ||| ||||||. &5' --------CCTCACGTCAGGG- 3'
Ubac2mmu-miR-382starbeg:769end:785pic:3' TTTTTCACAACAGGCACTTACT 5'& |||| |||..||| &5' --------TTGTA-GTGGGTGA 3'
Ubac2mmu-miR-432beg:472end:497pic:3' GACGGG--TGACTAGATGAGGTTCT 5'& |||||| ||| ||.||. || &5' CTGCCCCAACTC--CTGCTTTCAG- 3'
Ubac2mmu-miR-432beg:104end:127pic:3' GACGGGTGACTAGATG--AGGTTCT 5'& ||||| || ||||||| &5' -----CACTGTCCTTAAATCCAAGA 3'
Ubac2mmu-miR-449abeg:98end:114pic:3' TGGTCGATTGTTATGTGACGGT 5'& || ||||||||.| &5' --------ACCATACACTGTC- 3'
Ubac2mmu-miR-449bbeg:698end:719pic:3' CGGTCGATTGTTGTGACGGA 5'& |||||| .||.| || || &5' GCCAGCCTGCAGCCCT-CC- 3'
Ubac2mmu-miR-449bbeg:96end:114pic:3' CGGTCGATTGTTGTGACGGA 5'& ||| | ||||||.| &5' -CCACCAT---ACACTGTC- 3'
Ubac2mmu-miR-450a-3pbeg:463end:484pic:3' TACTTACG--TTTCGTA-GGGGTTA 5'& || |.||. |||||| &5' ------GCCTAGAGTCTGCCCCAA- 3'
Ubac2mmu-miR-469beg:810end:832pic:3' CCTGTGGTTCTA-GTTACTTTCTCCGT 5'& .||.| .|| |.|||||| &5' -------GAGGTGTAAGC-AGGAGGCA 3'
Ubac2mmu-miR-484beg:40end:50pic:3' TAGCCCTCCCCTGACTCGGACT 5'& ||||||| &5' ---------------AGCCTGA 3'
Ubac2mmu-miR-500beg:882end:900pic:3' ACTTGGGAACG-GGTCCACGTAA 5'& ||| ||.||||.||| &5' --------TGCACCGGGTGTATT 3'
Ubac2mmu-miR-500beg:928end:948pic:3' ACTTGGGAACG----GGTCCACGTAA 5'& ||| |.|||||..| &5' --------TGCAAATCTAGGTGTGT- 3'
Ubac2mmu-miR-509-5pbeg:535end:556pic:3' TACTAACGGTGTAAGACCTCAT 5'& .||| |||| ||||.|| &5' GTGA-TGCCTAC--CTGGGGT- 3'
Ubac2mmu-miR-542-3pbeg:359end:381pic:3' AAAGTCAATAGTTAGACAGTGT 5'& |||| | ||||||| &5' --TCAGAAAGGC-TGTGTCACA 3'
Ubac2mmu-miR-544beg:843end:860pic:3' CTCGAACGATTTTTACGTCTTA 5'& |||| || ||.||.| &5' GAGCA-GC------TGTAGGA- 3'
Ubac2mmu-miR-568beg:939end:958pic:3' CACACA-TATGTAAATATGTA 5'& |||||| |||| |||| &5' GTGTGTGATACT----TACA- 3'
Ubac2mmu-miR-665beg:720end:740pic:3' TCCCTGGA-GTC-GGAGGACCA 5'& ||| ||| |||.|||| &5' ----ACCACCAGCCCTTCTGG- 3'
Ubac2mmu-miR-666-5pbeg:10end:34pic:3' CCGAGAGTGTCG--ACACGGGCGA 5'& |. | ||||. ||||||||| &5' -GTA-TGACAGTGATGTGCCCGC- 3'
Ubac2mmu-miR-670beg:320end:341pic:3' AAGTGGTGTATGTG-AGTCCCTA 5'& |||.| | ||| ||||||| &5' -TCATC-CT--CACGTCAGGGA- 3'
Ubac2mmu-miR-670beg:797end:815pic:3' AAGTGGTGTATGTGAGTCCCTA 5'& .|| ||| ||||||| &5' ------GCAGACAGTCAGGGA- 3'
Ubac2mmu-miR-673-3pbeg:666end:687pic:3' CCACGTGTCTTGAGTCGGGGCCT 5'& ||| ..||||||||||| &5' ---GCAAT-GGCTCAGCCCCGG- 3'
Ubac2mmu-miR-673-3pbeg:815end:837pic:3' CCACG--TGTCTTGAGTCGGGGCCT 5'& |||. .|||.| ||||||| &5' -GTGTAAGCAGGAGGCAGCCCC--- 3'
Ubac2mmu-miR-676beg:661end:687pic:3' TCGAGTTGTTG--GAGTCCT-GCC 5'& .|| ||.|||. ||||| ||| &5' GGC-CAGCAATGGCTCAGCCCCGG 3'
Ubac2mmu-miR-686beg:864end:883pic:3' AGAAGTGGCAGACCCTTCGTTA 5'& ||.||| | |||||| &5' -----ACTGTCCCGTAAGCAA- 3'
Ubac2mmu-miR-698beg:437end:457pic:3' TCCCTT--CCTTTGCTCTTAC 5'& |||||. |||.|.||| &5' AGGGAGCTGGAGATGAG---- 3'
Ubac2mmu-miR-704beg:833end:856pic:3' GATCCTCG-TCTCGTGTACAGA 5'& ||. |||| |||||| ||| &5' CTGTGAGCAAGAGCAGCTGT-- 3'
Ubac2mmu-miR-706beg:388end:407pic:3' AAAAAACTCTGTCCCAAAGAGA 5'& || ||| ||||||.|.| &5' -----TG-GACTGGGTTTTTTT 3'
Ubac2mmu-miR-713beg:192end:213pic:3' CGACACACGGA---AGTCACGT 5'& ||| || ||||||. &5' -CTGG--GCATTTCTCAGTGT- 3'
Ubac2mmu-miR-720beg:822end:843pic:3' ACCTC---CGGGGTCGCTCTA 5'& |||| ||||| |.||| &5' -GGAGGCAGCCCCTGTGAG-- 3'
Ubac2mmu-miR-741beg:188end:209pic:3' AGATGTATCTTACCGTAGAGAGT 5'& |.||| |||||.||||| &5' TTTACTG-----GGCATTTCTCA 3'
Ubac2mmu-miR-744starbeg:734end:745pic:3' TCCAACTCCAATCACCGTTGTC 5'& |||||.|| &5' -------------TGGCAGCA- 3'
Ubac2mmu-miR-744starbeg:903end:917pic:3' TCCAACTCCAATCAC-CGTTGTC 5'& |||| |||.|| &5' -----------AGTGAGCAGCA- 3'
Ubac2mmu-miR-759beg:379end:390pic:3' CAGTTTTAACAAACGTGAGACG 5'& .||||||. &5' --------------TACTCTGT 3'
Ubac2mmu-miR-762beg:713end:735pic:3' CGAGACAGGGCC--GG-GGTCGGGG 5'& ||| || |||||||. &5' ------TCCATACACCACCAGCCCT 3'
Ubac2mmu-miR-875-5pbeg:810end:821pic:3' GTGGACTATTTTGACTCCATAT 5'& |||||.|| &5' --------------GAGGTGTA 3'
Ubac2mmu-miR-881beg:893end:909pic:3' AGATAAGTCTTTTCTGTGTCAA 5'& ||||| .|||||| &5' --TATTCT------GCACAGT- 3'
Ubac2mmu-miR-883b-5pbeg:412end:436pic:3' ACTGACGATGGGTA-AGAGTCAT 5'& | .|| ||..|| |||||||. &5' -GTTTG-TATTCACATCTCAGTG 3'
Ubac2mmu-miR-883b-5pbeg:481end:499pic:3' ACTGACGATGGGTAAGAGTCAT 5'& || ||. |.|||||| &5' ------CT-CCTGCTTTCAGTA 3'
Ubac2mmu-miR-92abeg:303end:319pic:3' GTCCGGCCCTGTTCACGTTAT 5'& ||. |.||||||.| &5' ---GCT----CGAGTGCAGT- 3'
Ubac2mmu-miR-92bbeg:300end:319pic:3' CCTCCGGCCCTGCTCACGTTAT 5'& || ||. ||||||||.| &5' -GAAGCT----CGAGTGCAGT- 3'
Ubac2mcmv-miR-m01-2beg:396end:414pic:3' TGGCAAGGTTGGGCTAAGAGAAG 5'& |||.. |||||||| &5' ---GTTTTTT-----TTCTCTTC 3'
DNA & RNA Element - RAID2
Gene NameRAID IDInteractor 1Category 1ID 1Interactor 2Category 2ID 2MethodsScore
Ubac2RAID00093983mmu-miR-217-5pmiRNAMIMAT0000679Ubac2mRNA68889Prediction0.1828
Ubac2RAID00154935mmu-miR-5624-5pmiRNAMIMAT0022377Ubac2mRNA68889Prediction0.1828
Ubac2RAID00168176mmu-miR-329-3pmiRNAMIMAT0000567Ubac2mRNA68889Prediction0.1828
Ubac2RAID00357718mmu-miR-1938miRNAMIMAT0009402Ubac2mRNA68889Prediction0.1828
Ubac2RAID00434046mmu-miR-342-3pmiRNAMIMAT0000590Ubac2mRNA68889Prediction0.1828
Ubac2RAID00656538mmu-miR-1947-3pmiRNAMIMAT0017343Ubac2mRNA68889Prediction0.1828
Ubac2RAID00692542mmu-miR-3058-5pmiRNAMIMAT0014813Ubac2mRNA68889Prediction0.1828
Ubac2RAID00900323mmu-miR-539-5pmiRNAMIMAT0003169Ubac2mRNA68889Prediction0.1828
Ubac2RAID01068916mmu-miR-155-5pmiRNAMIMAT0000165Ubac2mRNA68889Prediction0.1828
Ubac2RAID01163224mmu-miR-876-5pmiRNAMIMAT0004854Ubac2mRNA68889Prediction0.1828
Ubac2RAID01363977mmu-miR-674-5pmiRNAMIMAT0003740Ubac2mRNA68889Prediction0.1828
Ubac2RAID01489591mmu-mir-325miRNAMI0000597Ubac2mRNA68889Prediction0.1828
Ubac2RAID01875404mmu-miR-377-3pmiRNAMIMAT0000741Ubac2mRNA68889Prediction0.1828
Ubac2RAID01948640mmu-miR-346-5pmiRNAMIMAT0000597Ubac2mRNA68889Prediction0.1828
Ubac2RAID01959830mmu-miR-6953-5pmiRNAMIMAT0027806Ubac2mRNA68889Prediction0.1828
Ubac2RAID02057627mmu-miR-3473dmiRNAMIMAT0020632Ubac2mRNA68889Prediction0.1828
Ubac2RAID02108121mmu-miR-762miRNAMIMAT0003892Ubac2mRNA68889Prediction0.1828
Ubac2RAID02261249mmu-miR-182-5pmiRNAMIMAT0000211Ubac2mRNA68889Prediction0.1828
Ubac2RAID02335971mmu-miR-3082-5pmiRNAMIMAT0014872Ubac2mRNA68889Prediction0.1828
Ubac2RAID02503504mmu-miR-200c-3pmiRNAMIMAT0000657Ubac2mRNA68889Prediction0.1828
Ubac2RAID02637970mmu-miR-365-3pmiRNAMIMAT0000711Ubac2mRNA68889Prediction0.2202
Ubac2RAID02697195mmu-miR-7656-3pmiRNAMIMAT0029819Ubac2mRNA68889Prediction0.1828
Ubac2RAID02789368mmu-miR-670-5pmiRNAMIMAT0003736Ubac2mRNA68889Prediction0.1828
Ubac2RAID02900669mmu-miR-466n-3pmiRNAMIMAT0014894Ubac2mRNA68889Prediction0.1828
Ubac2RAID03104874mmu-miR-7648-3pmiRNAMIMAT0029799Ubac2mRNA68889Prediction0.1828
Ubac2RAID03144722mmu-miR-340-5pmiRNAMIMAT0004651Ubac2mRNA68889Prediction0.1828
Ubac2RAID03170971mmu-miR-142a-3pmiRNAMIMAT0000155Ubac2mRNA68889Prediction0.1828
Ubac2RAID03203347mmu-miR-3100-5pmiRNAMIMAT0014919Ubac2mRNA68889Prediction0.1828
Ubac2RAID03306320mmu-miR-362-3pmiRNAMIMAT0004684Ubac2mRNA68889Prediction0.1828
Ubac2RAID03434426mmu-miR-8094miRNAMIMAT0031395Ubac2mRNA68889Prediction0.1828
Ubac2RAID03640983mmu-miR-429-3pmiRNAMIMAT0001537Ubac2mRNA68889Prediction0.1828
Ubac2RAID03838282mmu-miR-505-3pmiRNAMIMAT0003513Ubac2mRNA68889Prediction0.1828
Ubac2RAID04001630mmu-miR-6940-5pmiRNAMIMAT0027780Ubac2mRNA68889Prediction0.1828
Ubac2RAID04048841mmu-miR-183-5pmiRNAMIMAT0000212Ubac2mRNA68889Prediction0.1828