DNA & RNA Element - microRNA |
Mirbase Acc | miRNA Name | Gene ID | Gene Symbol | miRNA Alignment | Alignment | Gene Alignment | miRNA Start | miRNA End | Gene Start | Gene End | Genome Coordinates | Conservation | Align Score | Seed Cat | Energy | mirSVR Score |
MIMAT0004547 | mmu-miR-203* | 105835 | Sgsm3 | acaACUUGACAGUUC-UUGGUGa | ||| |||||:| |||||| | acaUGA--UGUCAGGAAACCACa | 2 | 20 | 146 | 166 | [mm9:15:80833083-80833094,80833790-80833798:+] | 0.6311 | 132 | 6 | -19.09 | -0.3807 |
MIMAT0004583 | mmu-miR-130b* | 105835 | Sgsm3 | ucaucacguuGUCCCUUUCUca | || |||||| | gcaaaauacuCACAGAAAGAag | 3 | 13 | 229 | 250 | [mm9:15:80833861-80833875,80834234-80834240:+] | 0.7295 | 124 | 0 | -6.99 | -0.1087 |
MIMAT0004625 | mmu-miR-16* | 105835 | Sgsm3 | agUCGUC-GUGUCAG--UUAUGAcc | || || : | | | |||||| | ccAGGAGAUCCUGGCAAAAUACUca | 3 | 21 | 216 | 240 | [mm9:15:80833848-80833872:+] | 0.7999 | 122 | 0 | -14.71 | -0.1182 |
MIMAT0000558 | mmu-miR-325* | 105835 | Sgsm3 | ugugaaugacUCGUGGAUGAUCc | | | ::|||||| | uuguaaauaaACCUUUUACUAGa | 2 | 14 | 313 | 335 | [mm9:15:80842479-80842501:+] | 0.5062 | 129 | 6 | -8.54 | -0.1747 |
MIMAT0000605 | mmu-miR-350 | 105835 | Sgsm3 | cuuucACAUAC-CCGAAACA-CUu | || | | |||||||| || | auuccUGGAAGUGGCUUUGUAGAc | 2 | 18 | 333 | 356 | [mm9:15:80834515-80834538:+] | 0.4998 | 124 | 0 | -15.61 | -0.1415 |
MIMAT0000742 | mmu-miR-378* | 105835 | Sgsm3 | ugUGUCCUGGACCUCAGUCCUc | |||| || || ||||||| | ccACAGCACAUGAUGUCAGGAa | 2 | 21 | 139 | 160 | [mm9:15:80833076-80833094,80833790-80833792:+] | 0.6311 | 168 | 7 | -22.97 | -0.9066 |
MIMAT0004759 | mmu-miR-466a-5p | 105835 | Sgsm3 | auacauGUA-CAUGUGU-GUGUAu | |:| || |||| ||||| | uccugcCGUCGUCCACAGCACAUg | 2 | 17 | 127 | 150 | [mm9:15:80833064-80833087:+] | 0.5695 | 123 | 0 | -15.09 | -0.4109 |
MIMAT0002110 | mmu-miR-469 | 105835 | Sgsm3 | ccugUGGUUCUAGUUA-CUUUCUCCGu | ||||| | | | |:||||||| | acuaACCAAAAACCUUGGGAAGAGGCg | 2 | 23 | 277 | 303 | [mm9:15:80842443-80842469:+] | 0.5004 | 165 | 7 | -22.20 | -0.1231 |
MIMAT0004786 | mmu-miR-540-5p | 105835 | Sgsm3 | ugUC-UCAGUCUCCCACUGG-GAAc | || || || | | ||||| ||| | agAGAAGCCA-AUGAUGACCGCUUg | 2 | 22 | 86 | 109 | [mm9:15:80833023-80833046:+] | 0.5695 | 122 | 0 | -16.49 | -0.3661 |
MIMAT0003726 | mmu-miR-675-3p | 105835 | Sgsm3 | ugacUCGCCA-AUCCCGUAUGUc | :|| || | ||||||| | ccacGGCUGUCAAAAGCAUACAg | 2 | 19 | 189 | 211 | [mm9:15:80842355-80842377:+] | 0.4825 | 145 | 7 | -16.26 | -0.2384 |
MIMAT0003892 | mmu-miR-762 | 105835 | Sgsm3 | cgaGACAGGGCCGGGGUCGGGg | | || :|| ||||||| | auaCAGUGGUGG--CCAGCCCa | 2 | 20 | 206 | 225 | [mm9:15:80842372-80842391:+] | 0.4825 | 144 | 7 | -20.98 | -0.4403 |
MIMAT0003736 | mmu-miR-670 | 105835 | Sgsm3 | aagUGGUGUAUGUGAGUCCCUa | :|:| : | ::||||||| | cagGCUA-GGAGGUUCAGGGAa | 2 | 20 | 105 | 125 | [mm9:15:80842271-80842291:+] | 0.4784 | 145 | 7 | -15.84 | -0.3388 |
MIMAT0003896 | mmu-miR-763 | 105835 | Sgsm3 | cggugacCAAGAAGGGUCGACc | | || |:||||||| | ------uGCUCCUUCCAGCUGc | 2 | 16 | 1 | 16 | [mm9:15:80842167-80842182:+] | 0.5232 | 155 | 7 | -14.91 | -0.5993 |
MIMAT0003468 | mmu-miR-689 | 105835 | Sgsm3 | ccUGGGG--CGGCU-CGCCCCUGc | |||:: | || |||||||| | aaACCUUGGGAAGAGGCGGGGACa | 2 | 20 | 286 | 309 | [mm9:15:80842452-80842475:+] | 0.5033 | 149 | 7 | -27.37 | -0.5637 |
MIMAT0003470 | mmu-miR-691 | 105835 | Sgsm3 | aaaagacggagagaAGUCCUUa | ||||||| | cacagcacaugaugUCAGGAAa | 2 | 9 | 140 | 161 | [mm9:15:80833077-80833094,80833790-80833793:+] | 0.6311 | 140 | 7 | -10.76 | -0.6142 |
MIMAT0003499 | mmu-miR-709 | 105835 | Sgsm3 | agGA-GGACGGAGACGGAGg | || |||||:|||||||| | auCUGCCUGCUUCUGCCUCc | 2 | 18 | 381 | 400 | [mm9:15:80834563-80834582:+] | 0.4998 | 172 | 7 | -36.11 | -0.3427 |
MIMAT0003511 | mmu-miR-450b-5p | 105835 | Sgsm3 | auAAGUCC--UUGU-AUGAC-GUUUu | |||||| | || :||| |||| | agUUCAGGCUACCACGGCUGUCAAAa | 2 | 21 | 178 | 203 | [mm9:15:80842344-80842369:+] | 0.4825 | 122 | 0 | -17.65 | -0.1807 |
MIMAT0003511 | mmu-miR-450b-5p | 105835 | Sgsm3 | auaaGUCCUUGUAUGA-CGUUUu | |||||: || || ||||| | gcccCAGGAG-AUCCUGGCAAAa | 2 | 19 | 213 | 234 | [mm9:15:80833845-80833866:+] | 0.7999 | 128 | 0 | -16.02 | -1.1420 |
MIMAT0004210 | mmu-miR-804 | 105835 | Sgsm3 | agGUCC-ACUCCUUGUUGAGUGu | |||| ||: ||||||| | acCAGGCUGGCCUUGAACUCACa | 2 | 21 | 355 | 377 | [mm9:15:80834537-80834559:+] | 0.4998 | 147 | 7 | -24.32 | -0.3166 |
MIMAT0004210 | mmu-miR-804 | 105835 | Sgsm3 | agguccacuccuuguUGAGUGu | |||||| | agauccuggcaaaauACUCACa | 2 | 8 | 221 | 242 | [mm9:15:80833853-80833874:+] | 0.7999 | 120 | 6 | -16.17 | -0.1921 |
MIMAT0004237 | mmu-miR-742 | 105835 | Sgsm3 | aaAUGGGUCGUACCACCGAAAg | | ||::| | |||||||| | caUUCCUGGAA--GUGGCUUUg | 2 | 21 | 332 | 351 | [mm9:15:80834514-80834533:+] | 0.4998 | 153 | 7 | -17.68 | -0.1198 |
MIMAT0004842 | mmu-miR-879 | 105835 | Sgsm3 | ccgaaUCUCGA-UA-UUCGGAGa | ||:||| || ||||||| | gagacAGGGCUGAUGAAGCCUCa | 2 | 17 | 55 | 77 | [mm9:15:80808289-80808295,80832999-80833014:+] | 0.5312 | 158 | 7 | -20.56 | -0.1392 |
MIMAT0004875 | mmu-miR-466b-5p | 105835 | Sgsm3 | guacauGUA-CAUGUGU-GUGUAg | |:| || |||| ||||| | uccugcCGUCGUCCACAGCACAUg | 2 | 17 | 127 | 150 | [mm9:15:80833064-80833087:+] | 0.5695 | 123 | 0 | -12.91 | -0.4109 |
MIMAT0004879 | mmu-miR-466e-5p | 105835 | Sgsm3 | auacauGUA-CAUGUGU-GUGUAg | |:| || |||| ||||| | uccugcCGUCGUCCACAGCACAUg | 2 | 17 | 127 | 150 | [mm9:15:80833064-80833087:+] | 0.5695 | 123 | 0 | -12.89 | -0.4109 |
MIMAT0005292 | mmu-miR-582-3p | 105835 | Sgsm3 | aacccaagucaacAAGUUGUCc | |||||||| | cuggaaggcucccUUCAACAGa | 2 | 10 | 51 | 72 | [mm9:15:80842217-80842238:+] | 0.4529 | 145 | 7 | -11.68 | -0.1371 |
MIMAT0007873 | mmu-miR-1896 | 105835 | Sgsm3 | gaGGAGUGGGUGGUAGUCUCUc | ||||| || :||||||| | agCCUCA-GGACAGUCAGAGAa | 2 | 21 | 71 | 91 | [mm9:15:80833008-80833028:+] | 0.5695 | 158 | 7 | -20.53 | -0.3728 |
MIMAT0009397 | mmu-miR-1933-3p | 105835 | Sgsm3 | uaucagugugacUACCAGGACc | ||||||||| | gcuuuccuuaacAUGGUCCUGa | 2 | 11 | 229 | 250 | [mm9:15:80842395-80842416:+] | 0.4825 | 150 | 7 | -15.30 | -0.9765 |
MIMAT0009399 | mmu-miR-1935 | 105835 | Sgsm3 | ucucuaggcGGUCGGAGACGGa | || :||||||| | gccaguggcCCUUUCUCUGCCc | 2 | 14 | 175 | 196 | [mm9:15:80833807-80833828:+] | 0.6927 | 145 | 7 | -19.95 | -0.3965 |
MIMAT0009416 | mmu-miR-1949 | 105835 | Sgsm3 | uugaUAC-GACUGUAGGACCAUAUc | :|| | | ||| ||||||| | aggaGUGCCAGCCAU-AUGGUAUAc | 2 | 21 | 250 | 273 | [mm9:15:80842416-80842439:+] | 0.4914 | 149 | 7 | -13.03 | -0.5435 |
MIMAT0009431 | mmu-miR-1958 | 105835 | Sgsm3 | ugaaugacgaaGGUGAAAGGAu | |::||||||| | ggccagcccagCUGCUUUCCUu | 2 | 12 | 216 | 237 | [mm9:15:80842382-80842403:+] | 0.4825 | 147 | 7 | -14.18 | -0.3651 |
MIMAT0009433 | mmu-miR-1960 | 105835 | Sgsm3 | ucGGGAGAAGAUUGUCGUG-ACc | || || || ||||||| || | ugCCGUCGUC-CACAGCACAUGa | 2 | 21 | 130 | 151 | [mm9:15:80833067-80833088:+] | 0.5695 | 126 | 0 | -19.57 | -0.6778 |
MIMAT0009441 | mmu-miR-1968 | 105835 | Sgsm3 | ucaggugguAGGAAUUGUCGACGu | ||||| ||||||| | ------ugcUCCUU-CCAGCUGCu | 2 | 16 | 1 | 17 | [mm9:15:80842167-80842183:+] | 0.5232 | 153 | 7 | -18.15 | -0.6893 |
MIMAT0009441 | mmu-miR-1968 | 105835 | Sgsm3 | ucaggUGGUAGGAAUUGUCGACGu | :||| || ||||||| | uggugGCCAGCC----CAGCUGCu | 2 | 20 | 212 | 231 | [mm9:15:80842378-80842397:+] | 0.4825 | 142 | 7 | -17.87 | -0.1358 |
MIMAT0009441 | mmu-miR-1968 | 105835 | Sgsm3 | ucagGUGGUAGGAAUU--GUCGACGu | |:||: |: :| ||||||| | ----CGCCGACUAGGAGGCAGCUGCu | 2 | 21 | 1 | 22 | [mm9:15:80808235-80808256:+] | 0.5029 | 147 | 7 | -19.88 | -0.1090 |
MIMAT0009459 | mmu-miR-1982* | 105835 | Sgsm3 | ggagggguccugGGAGGGUu | ||||||| | ugccugcuucugCCUCCCAa | 2 | 9 | 384 | 403 | [mm9:15:80834566-80834585:+] | 0.4998 | 140 | 7 | -22.89 | -0.4683 |
MIMAT0011210 | mmu-miR-2134 | 105835 | Sgsm3 | cguGGGGCAAAGGGUUCUg | ::|:| |||||||| | ugcUUCUGCCUCCCAAGAg | 2 | 17 | 388 | 406 | [mm9:15:80834570-80834588:+] | 0.4998 | 152 | 7 | -19.40 | -0.1771 |
MIMAT0011287 | mmu-miR-2183 | 105835 | Sgsm3 | uccUCCAGUCC-CCAAGUu | ||| :||| |||||| | cucAGGCUAGGAGGUUCAg | 2 | 16 | 103 | 121 | [mm9:15:80842269-80842287:+] | 0.4784 | 127 | 6 | -20.38 | -0.1250 |
MIMAT0012771 | mmu-miR-432 | 105835 | Sgsm3 | gacGGGUGACUAGA-UGAGGUUCu | ::| ||| || |||||||| | ccuUUCUCUGCCCUGACUCCAAGc | 2 | 21 | 184 | 207 | [mm9:15:80833816-80833839:+] | 0.7463 | 159 | 7 | -23.96 | -0.5165 |
MIMAT0012771 | mmu-miR-432 | 105835 | Sgsm3 | gaCGGGUGACUAGAU-GA-GGUUCu | |||::|| |||: || ||||| | cuGCCUGCU--UCUGCCUCCCAAGa | 2 | 22 | 383 | 405 | [mm9:15:80834565-80834587:+] | 0.4998 | 125 | 0 | -25.65 | -0.1660 |
MIMAT0000124 | mmu-miR-15b | 105835 | Sgsm3 | acauuUGGUACUACAC-GACGAu | || : ||| || ||||| | aacucACAGAGAUCUGCCUGCUu | 2 | 18 | 370 | 392 | [mm9:15:80834552-80834574:+] | 0.4998 | 121 | 0 | -10.78 | -0.1959 |
MIMAT0000658 | mmu-miR-210 | 105835 | Sgsm3 | aguCGGCGACAGUGUG-CGUGUc | ||||: ||| ||| ||||| | ccuGCCGUCGUC-CACAGCACAu | 2 | 20 | 128 | 149 | [mm9:15:80833065-80833086:+] | 0.5695 | 133 | 0 | -24.39 | -0.3460 |
MIMAT0000743 | mmu-miR-379 | 105835 | Sgsm3 | ggaugcaagguaucAGAUGGu | |||||| | uaaagacauuauucUCUACC- | 2 | 8 | 414 | 433 | [mm9:15:80834596-80834615:+] | 0.4998 | 120 | 6 | -9.62 | -0.1087 |
MIMAT0003169 | mmu-miR-539 | 105835 | Sgsm3 | ugugugGUUCCUAUU-AAAGAGg | |||||| :| |||||| | uguggaCAAGGAAGACUUUCUCu | 2 | 17 | 297 | 319 | [mm9:15:80834287-80834300,80834493-80834501:+] | 0.5795 | 132 | 6 | -16.10 | -0.3256 |
MIMAT0003738 | mmu-miR-496 | 105835 | Sgsm3 | cuCUA--ACCGGUACAUUAUGAGu | ||| |||| | ||||||| | gaGAUCCUGGCAA---AAUACUCa | 2 | 21 | 220 | 240 | [mm9:15:80833852-80833872:+] | 0.7999 | 147 | 7 | -18.90 | -1.2076 |
MIMAT0003453 | mmu-miR-497 | 105835 | Sgsm3 | augUUUGGUGUC---ACAC-GACGAc | || :||||| | || ||||| | uugAACUCACAGAGAUCUGCCUGCUu | 2 | 20 | 367 | 392 | [mm9:15:80834549-80834574:+] | 0.4998 | 122 | 0 | -16.67 | -0.1978 |