Ubash3a
DNA & RNA Element - AREsite
Gene NameMotifCDS AreaARE AreaEvidence
Ubash3a; Sts2ATTTA13-18872574-2578
DNA & RNA Element - microRNA
Mirbase AccmiRNA NameGene IDGene SymbolmiRNA AlignmentAlignmentGene AlignmentmiRNA StartmiRNA EndGene StartGene EndGenome CoordinatesConservationAlign ScoreSeed CatEnergymirSVR Score
MIMAT0004523mmu-miR-29b*328795Ubash3aauuuGGUGGUAUA-CUUUGGUCg |||||| || ||||||| cagcCCACCAGAUCAAAACCAGg219450472[mm9:17:31378773-31378795:+]0.56191657-20.62-0.4009
MIMAT0004525mmu-miR-99b*328795Ubash3agccugggUGUCUGUGCUCGAAc :||| | ||||||| ------gGCAG-CCCGAGCUUu216115[mm9:17:31378324-31378338:+]0.56011497-15.29-0.1058
MIMAT0004534mmu-miR-145*328795Ubash3aguUCUUGUC--A-UAAAGGUCCUUa :|||| | | | ||||||||| gaGGAACUGCCUCACUUCCAGGAAc221288312[mm9:17:31378611-31378635:+]0.52721587-18.78-0.6164
MIMAT0004534mmu-miR-145*328795Ubash3aguUCUUGUCAUAAAGGUCCUUa || |: |||||||||| gcAGCCCGAGCUUUCCAGGAAg221223[mm9:17:31378325-31378346:+]0.56011567-17.73-0.1609
MIMAT0004534mmu-miR-145*328795Ubash3aguucuugucauaaaGGUCCUUa ||||||| gaugccugaggccaCCAGGAAg2989110[mm9:17:31353026-31353047:+]0.51571407-13.39-0.1043
MIMAT0004547mmu-miR-203*328795Ubash3aacaaCUUGAC--AGUUCU-UGGUGa |: ||| |:|:|| ||||| cagaGGUCUGGAUUAGGAUACCACa219232256[mm9:17:31378555-31378579:+]0.54721210-15.95-0.4756
MIMAT0004574mmu-miR-294*328795Ubash3aucuaucccGGAGGU-AAAACUCa :||: | ||||||| cgcccacaUCUUGAUUUUUGAGc215166188[mm9:17:31353103-31353125:+]0.51571457-11.31-0.5430
MIMAT0000376mmu-miR-298328795Ubash3acccuuCUUGUCGGGAGGAGACGg ||:| |: ||||||| uuuuuGAGCUUCUGGCCUCUGCa219180202[mm9:17:31353117-31353139:+]0.51571507-20.00-0.4945
MIMAT0004630mmu-miR-26b*328795Ubash3acucGGUUCAUUACCUCUUGUCc |::: | : |||||||| gcaCUGGUUUGGAGAGAACAGa220268289[mm9:17:31378591-31378612:+]0.53721477-15.21-0.3377
MIMAT0000569mmu-miR-330*328795Ubash3aagAGACGUCCGGGACACGA-AACg |:| :||::| |||| ||| acUUUAGGGGUUCCUUGCUGUUGc222491514[mm9:17:31378814-31378837:+]0.50321210-20.77-0.1153
MIMAT0000740mmu-miR-376a328795Ubash3augCACCUAAAAGGAGAUG-CUa || :| ||||||||| || ggGUCUGUGUUCCUCUACAGAu220604625[mm9:17:31378927-31378948:+]0.50231310-19.73-0.2227
MIMAT0004704mmu-miR-335-3p328795Ubash3accagUCCUCGUUA----UUACUUUUu :|||||||| |||||||| aaaaGGGAGCAAUGGUCAAUGAAAAa219418443[mm9:17:31378741-31378766:+]0.56191657-20.51-1.0011
MIMAT0001422mmu-miR-434-3p328795Ubash3aucCUCAGCUC-ACUACCAA-GUUu |:| :| | | |||||| ||| agGGGCUGUGAUAAUGGUUACAAa2215073[mm9:17:31378373-31378396:+]0.50831230-18.14-0.3339
MIMAT0002889mmu-miR-532-5p328795Ubash3augCCAGGAUGUGAGUUCCGUAc ||| |||| ||||||| auGGU--UACA---AAGGCAUc2216379[mm9:17:31378386-31378402:+]0.54721457-14.84-0.4651
MIMAT0004187mmu-miR-744328795Ubash3aacgacaaucgggAUCGGGGCGu |:||||||| uuggaaggaauaUGGCCCCGCc211148169[mm9:17:31353085-31353106:+]0.51571467-20.69-0.3394
MIMAT0003892mmu-miR-762328795Ubash3acgagacagggccggGGUCGGGg ||||||| aaugaaaaaaguggCCAGCCCa29435456[mm9:17:31378758-31378779:+]0.56191407-18.63-0.4448
MIMAT0014816mmu-miR-3099328795Ubash3aaggGGUUGGAGAGAGAUCGGAu | || :| || ||||||| uuaCAAAGUUAUC-CUAGCCUc22086106[mm9:17:31378409-31378429:+]0.54721537-15.54-0.2858
MIMAT0003896mmu-miR-763328795Ubash3acggUGACCAAGAAGGGUCGACc :| || | | ||||||| uagGCAGGGCCAUACCAGCUGa220397418[mm9:17:31378720-31378741:+]0.56191517-17.30-0.8800
MIMAT0003739mmu-miR-673-5p328795Ubash3agaGGUUCC-UGGU-CUCGACACUc |||||| || | |:||||||| ugCCAAGGCACAAGGGGCUGUGAu2213861[mm9:17:31378361-31378384:+]0.50831707-27.85-0.1287
MIMAT0003898mmu-miR-760328795Ubash3aagggGUGUCUGGGUCUCGGc | || ||||||||| aggaCCCAACCCCAGAGCCu217128147[mm9:17:31353065-31353084:+]0.51571567-26.49-0.3273
MIMAT0003457mmu-miR-680328795Ubash3aggGGGUACAGUCGUCUACGGg |||: : | ||||||| ucCCCGCACUUGAAGAUGCCa220320340[mm9:17:31378643-31378663:+]0.53771477-23.42-0.8143
MIMAT0003470mmu-miR-691328795Ubash3aaaaaGACGGAGAGAA-GUCCUUa ||||||| ||| |||||| ggaaCUGCCUCACUUCCAGGAAc219290312[mm9:17:31378613-31378635:+]0.52721466-25.97-0.6206
MIMAT0003476mmu-miR-669b328795Ubash3auguacguguacgugUGUUUUGa ||||||| gacuggaggaaagaACAAAACa29118139[mm9:17:31378441-31378462:+]0.54721407-7.90-0.5444
MIMAT0003742mmu-miR-455328795Ubash3acacauauaCGGG-CAC-CUGACg |||| ||| ||||| agccucucGCCCAGUGUGACUGg214101123[mm9:17:31378424-31378446:+]0.54721200-20.14-0.4656
MIMAT0003499mmu-miR-709328795Ubash3aaggaggacggaGACGGAGg ||||||| gaacagaggaaCUGCCUCa29283301[mm9:17:31378606-31378624:+]0.52721407-14.36-0.7715
MIMAT0003499mmu-miR-709328795Ubash3aagGAGGACGGAGA-CGGAGg :|: ||:||| ||||| uuUUUGAGCUUCUGGCCUCu218180199[mm9:17:31353117-31353136:+]0.51571210-18.75-0.2648
MIMAT0004856mmu-miR-105328795Ubash3augGUGUUCGUAGACUCGUGAACc :|||: | || ||||||| acUACAGAC-UCCCCGCACUUGa222311332[mm9:17:31378634-31378655:+]0.53771517-18.07-0.4458
MIMAT0004868mmu-miR-343328795Ubash3aagacccGUGUAC--UUCCCUCu || || ||||||| ccauacCAGCUGAAAAGGGAGc215406427[mm9:17:31378729-31378750:+]0.56191417-12.35-0.3455
MIMAT0004885mmu-miR-467c328795Ubash3aguGUAUAUGUACGUGCGUGAAu :| | || | | ||||||| acUACAGAC-UCCCCGCACUUg221311331[mm9:17:31378634-31378654:+]0.53771507-16.23-0.2429
MIMAT0004886mmu-miR-467d328795Ubash3agcGUAUAUGUACGCGCGUGAAu :| | || | | ||||||| acUACAGAC-UCCCCGCACUUg221311331[mm9:17:31378634-31378654:+]0.53771507-16.99-0.2429
MIMAT0004888mmu-miR-493328795Ubash3aggACCGUGUGUC-AUCCUGGAAGu | || ||::| | ||||||| aaUAGC-CAUGGCUCAGACCUUCg222158180[mm9:17:31378481-31378503:+]0.54721507-22.14-0.2761
MIMAT0004893mmu-miR-574-5p328795Ubash3augugugagUGUGUGUGUGUGAGu ||| | |||||||| aggaaagaACA-AAACACACUCg216124145[mm9:17:31378447-31378468:+]0.54721537-18.03-0.7634
MIMAT0004861mmu-miR-877328795Ubash3agggacgcGGUA-GAGGAGAUg |::| :||||||| gcgggguCUGUGUUCCUCUAc214601621[mm9:17:31378924-31378944:+]0.50231447-22.42-0.1442
MIMAT0004862mmu-miR-877*328795Ubash3aacccuccucccucuUCUCCUGu ||||||| ccucuacagauucuAGAGGACu29615636[mm9:17:31378938-31378959:+]0.50231407-11.33-0.2545
MIMAT0004862mmu-miR-877*328795Ubash3aacCCUCCUCCCUCU----UCUCCUGu |||| || ||| ||||||| aaGGAGCUGGAAGACACCAGAGGACc221108133[mm9:17:31353045-31353070:+]0.51571557-23.47-0.2506
MIMAT0004940mmu-miR-511328795Ubash3aacucacgucucguUUUCCGUa ||||||| ugauaaugguuacAAAGGCAu295878[mm9:17:31378381-31378401:+]0.54721407-10.28-0.4793
MIMAT0005830mmu-miR-466l328795Ubash3auuauacACACGUA-CAUAAAUAu || |||| ||||||| ccuuccUG-GCAUCCUAUUUAUu217672693[mm9:17:31378995-31379016:+]0.50231497-7.13-0.3553
MIMAT0005841mmu-miR-669h-5p328795Ubash3acgugaguUGAUAUGUGGGUACGUa :|| | | ||||||| caguaguGCUUGAAAGCCAUGCAa218534557[mm9:17:31378857-31378880:+]0.50031497-13.85-0.6506
MIMAT0005853mmu-miR-669e328795Ubash3auacUUGUACG---UGUGUGU-UCUGu || || | ||:|||| |||| ugcAAAAUUCCUAACGCACAGAGACa220553578[mm9:17:31378876-31378901:+]0.50031220-16.61-0.9571
MIMAT0007869mmu-miR-1899328795Ubash3accuucgucuaagccGGUAGCGa ||||||| ccuuauuacuauaaCCAUCGCu29372393[mm9:17:31378695-31378716:+]0.56191407-15.21-0.8864
MIMAT0009390mmu-miR-1927328795Ubash3aagucagggauuguagGUCUCCAg ||||||| cugcagaggccagagCAGAGGUc29217239[mm9:17:31378540-31378562:+]0.54721407-22.10-0.1608
MIMAT0009399mmu-miR-1935328795Ubash3aucUCUAGGCGGUCGGAGA-CGGa || | : |:||||||| ||| aaAGUUAUCCUAGCCUCUCGCCc22190112[mm9:17:31378413-31378435:+]0.54721320-24.41-0.3509
MIMAT0009404mmu-miR-1940328795Ubash3auuGACGAGGUGGA---AGA-GUCAGGA-GGUa |||| | | | ||| | ||||| ||| caCUGCCACCCAUGGAUCUGCUGUCCUGCCAg226182213[mm9:17:31378505-31378536:+]0.54721230-25.41-0.1630
MIMAT0009409mmu-miR-1944328795Ubash3auuaGUCUUGAACUGUAAGUCGUGUCUc || ||:| | | ||||||| augCAAAAUU---CCUAACGCACAGAg225552575[mm9:17:31378875-31378898:+]0.50031447-16.15-0.4630
MIMAT0009409mmu-miR-1944328795Ubash3auuagucuuGAACUGUA---AGUC-GUGUCUc |||| ::| ||:| |||||| agggguucCUUGCUGUUGCUCGGACACAGAg220496526[mm9:17:31378819-31378849:+]0.50181226-21.66-0.1722
MIMAT0009414mmu-miR-1937b328795Ubash3aaccccCGAGCAGGCCCUa || | ||||||| ----cGC-CAUCCGGGAa214113[mm9:17:31352128-31352140:+]0.68331437-15.07-0.9272
MIMAT0009424mmu-miR-1953328795Ubash3aguCUUCGGACUCUUGA-AAGGGu || |: |||:||| ||||| caGAUUCUAGAGGACUCUUCCCc221621643[mm9:17:31378944-31378966:+]0.50231320-23.22-0.1549
MIMAT0009425mmu-miR-1954328795Ubash3auugucccagaguGAGACGUCa |||||||| uguccugccagcCUCUGCAGa210203223[mm9:17:31378526-31378546:+]0.54721457-14.85-0.1404
MIMAT0009425mmu-miR-1954328795Ubash3auugUCCCAGAGU-GAGACGUCa || ||| : |||||||| uugAGCUUCUGGCCUCUGCAGa219183204[mm9:17:31353120-31353141:+]0.51571537-17.24-0.3413
MIMAT0009429mmu-miR-1937c328795Ubash3aaccccCGAGAAGGCCCUa || | ||||||| ----cGC-CAUCCGGGAa214113[mm9:17:31352128-31352140:+]0.68331437-15.07-0.9272
MIMAT0009435mmu-miR-1962328795Ubash3auacACAGGGUCACGGUCGGAGa ||||| |||||||||| ugcUGUCC---UGCCAGCCUCu220200218[mm9:17:31378523-31378541:+]0.54721637-29.18-0.1913
MIMAT0009458mmu-miR-1981328795Ubash3acgGUGCAGAUUCGGGUCG-GAAAUg :|| | ||| | : || ||||| auUAC-UAUAACCAUCGCUCUUUAg223376399[mm9:17:31378699-31378722:+]0.56191200-11.11-0.1488
MIMAT0000121mmu-let-7g328795Ubash3auugacAUGUUU-GAU--GAU-GGAGu |||||| :|| ||| |||| augauUACAAAGUUAUCCUAGCCUCu21882107[mm9:17:31378405-31378430:+]0.54721230-11.55-0.1899
MIMAT0000122mmu-let-7i328795Ubash3auugUCGUGUUU-GAU--GAU-GGAGu | :||||| :|| ||| |||| augAUUACAAAGUUAUCCUAGCCUCu22082107[mm9:17:31378405-31378430:+]0.54721210-11.89-0.1899
MIMAT0000135mmu-miR-125a-5p328795Ubash3aaguguccaauuucccaGAGUCCCu ||||||| caaaacacacucgauaCUCAGGGg29133156[mm9:17:31378456-31378479:+]0.54721407-17.89-0.5006
MIMAT0000136mmu-miR-125b-5p328795Ubash3aagUGUUCAAUCCCAGAGUCCCu ||| | | ||||||| aaACACACUCGAUACUCAGGGg221135156[mm9:17:31378458-31378479:+]0.54721447-18.87-0.5040
MIMAT0000141mmu-miR-130a328795Ubash3auacgGGAAAAUUGUA-ACGUGAc | || ||||| |||||| accaCAUUGCAACAUGUGCACUg219251273[mm9:17:31378574-31378596:+]0.53721306-19.97-0.4074
MIMAT0000147mmu-miR-135a328795Ubash3aagUGU-AUCCUUAUUUUUCGGUAu ||| ||| : | :|||||||| agACAGUAGUGCUUGAAAGCCAUg222531554[mm9:17:31378854-31378877:+]0.50031647-16.71-0.4279
MIMAT0000149mmu-miR-137328795Ubash3agauGCGCAUAAGAAUUC-GUUAUu :|| || : |:|| ||||| cucUGCAGAUCUCUGAGACAAUAa221196219[mm9:17:31353133-31353156:+]0.51571200-11.99-0.5112
MIMAT0000150mmu-miR-138328795Ubash3agccggacuaaguGUUGUGGUCGa :::||||||| caggacagcagcUGGCACCAGCa212469491[mm9:17:31378792-31378814:+]0.53251437-16.92-0.2884
MIMAT0000162mmu-miR-152328795Ubash3agguucaagacaGUACGUGACu ::||||||| acauugcaacaUGUGCACUGg211254274[mm9:17:31378577-31378597:+]0.53721427-13.61-0.1570
MIMAT0000237mmu-miR-204328795Ubash3auccGUAU--CCUACUGUUUCCCUu |||| | ||| ||||||| ggcCAUACCAGCUGA-AAAGGGAg220404426[mm9:17:31378727-31378749:+]0.56191527-15.86-0.2085
MIMAT0004577mmu-miR-299328795Ubash3auucgccaaauGGCAGGGUGUAu ||| ||||||| gaauauggccCCG-CCCACAUc213155175[mm9:17:31353092-31353112:+]0.51571467-19.99-0.1716
MIMAT0000381mmu-miR-34c328795Ubash3acguuAGUC-GAUUGAUGUGACGGa |||| | | ||||||| uggcUCAGACCUUCGUCACUGCCa220166189[mm9:17:31378489-31378512:+]0.54721467-17.69-0.5028
MIMAT0000382mmu-miR-34b-5p328795Ubash3auguuAGUC--GAUUAAUGUGACGGa |||| || | ||||||| uggcUCAGACCUUCGU-CACUGCCa220166189[mm9:17:31378489-31378512:+]0.54721447-16.57-0.4764
MIMAT0000385mmu-miR-106a328795Ubash3agaUGGACGUGACAAUCGUGAAAc :|: |||| |||||||| caGCUGGCAC---CAGCACUUUa222477496[mm9:17:31378800-31378819:+]0.50321497-16.09-0.2433
MIMAT0000386mmu-miR-106b328795Ubash3auaGA-CGUGACAGUCGUGAAAu || |||| ||||||||| agCUGGCAC---CAGCACUUUa220478496[mm9:17:31378801-31378819:+]0.50321547-20.89-0.2433
MIMAT0000387mmu-miR-130b328795Ubash3auacgGGAAAGUAGUA-ACGUGAc | || || ||| |||||| accaCAUUGCAACAUGUGCACUg219251273[mm9:17:31378574-31378596:+]0.53721306-17.99-0.4012
MIMAT0000513mmu-miR-19b328795Ubash3aagUCAAAACGUACC-UAAAC-GUGu | || ||||| :|||| ||| ggAAUUCGCCAUGGCGUUUGCCACa2221034[mm9:17:31352137-31352161:+]0.68331240-16.17-0.5532
MIMAT0000516mmu-miR-148a328795Ubash3auguuucaagacauCACGUGACu |||||||| cacauugcaacauGUGCACUGg210253274[mm9:17:31378576-31378597:+]0.53721457-16.40-0.1570
MIMAT0000524mmu-let-7e328795Ubash3auuGAUAUGUUGG-AGGAU-GGAGu :|| | |::: ||||| |||| gaUUACAAAGUUAUCCUAGCCUCu22184107[mm9:17:31378407-31378430:+]0.54721230-16.25-0.1899
MIMAT0000529mmu-miR-20a328795Ubash3agaUGGACGUGAUAUUCGUGAAAu | ||| :| | |||||||| gcAGCUG-GC-ACCAGCACUUUa222476496[mm9:17:31378799-31378819:+]0.50321497-18.65-0.2433
MIMAT0000540mmu-miR-93328795Ubash3agaUGGACGUGCUUGUCGUGAAAc | ||| :| | ||||||||| gcAGCUG-GC-ACCAGCACUUUa222476496[mm9:17:31378799-31378819:+]0.50321577-19.06-0.2390
MIMAT0000542mmu-miR-34a328795Ubash3auguuGGUC--GAUUCUGUGACGGu :||| || | ||||||| uggcUCAGACCUUCGUCACUGCCa219166189[mm9:17:31378489-31378512:+]0.54721497-19.64-0.4994
MIMAT0000545mmu-miR-98328795Ubash3auugUUAUG-UUGAAU--GAU-GGAGu | ||| || ||| ||| |||| augAUUACAAAGUUAUCCUAGCCUCu22082107[mm9:17:31378405-31378430:+]0.54721210-10.10-0.1899
MIMAT0000555mmu-miR-324-5p328795Ubash3augUGGUUACGGGAUCCCCUACGc :||| ||| | ||||||| gaGCCACAGCC--AAGGGAUGCc2227494[mm9:17:31353011-31353031:+]0.51571547-20.35-0.2291
MIMAT0000559mmu-miR-326328795Ubash3augaccuccuucccGGGUCUCc ||||||| cagaggacccaacCCCAGAGc29125145[mm9:17:31353062-31353082:+]0.51571407-19.89-0.1456
MIMAT0000565mmu-miR-328328795Ubash3augccuucccGUCUCUCCCGGUc :||: ||||||| aucgcucuuUAGGCAGGGCCAu214388409[mm9:17:31378711-31378732:+]0.56191497-18.28-0.2576
MIMAT0004642mmu-miR-330328795Ubash3acggaUUCUGUGUCCGGGUCUCu |:||| || ||||||| ccagAGGACCCAACCCCAGAGc219124145[mm9:17:31353061-31353082:+]0.51571627-22.81-0.1428
MIMAT0000580mmu-miR-148b328795Ubash3auguuucaagacacUACGUGACu :||||||| cacauugcaacauGUGCACUGg210253274[mm9:17:31378576-31378597:+]0.53721417-14.49-0.1570
MIMAT0000609mmu-miR-351328795Ubash3aguccgaguuuccCGAGGAGUCCCu | | ||||||| caaaacacacucGAUACUCAGGGg213133156[mm9:17:31378456-31378479:+]0.54721447-21.13-0.5040
MIMAT0000612mmu-miR-135b328795Ubash3aagUGU-AUCCUUACUUUUCGGUAu ||| ||| : | :|||||||| agACAGUAGUGCUUGAAAGCCAUg222531554[mm9:17:31378854-31378877:+]0.50031647-18.09-0.4279
MIMAT0000649mmu-miR-17328795Ubash3agaUGGACGUGACAUUCGUGAAAc :|: |||| |||||||| caGCUGGCAC---CAGCACUUUa222477496[mm9:17:31378800-31378819:+]0.50321497-16.08-0.2433
MIMAT0000651mmu-miR-19a328795Ubash3aagUCAAAACGUAUC-UAAAC-GUGu | || |||:| :|||| ||| ggAAUUCGCCAUGGCGUUUGCCACa2221034[mm9:17:31352137-31352161:+]0.68331200-13.46-0.5532
MIMAT0000658mmu-miR-210328795Ubash3aagucggcgacagugUGCGUGUc ||||||| augcaaaauuccuaACGCACAg29552573[mm9:17:31378875-31378896:+]0.50031407-16.79-0.7703
MIMAT0000666mmu-miR-320328795Ubash3aagcgggagaGUUGGG-UCGAAAa ||:||| |||||| -------ggCAGCCCGAGCUUUc214116[mm9:17:31378324-31378339:+]0.56011256-17.50-0.1190
MIMAT0000668mmu-miR-211328795Ubash3auccguuucCUACUGUUUCCCUu | ||| ||||||| ccauaccaGCUGA-AAAGGGAg215406426[mm9:17:31378729-31378749:+]0.56191487-12.97-0.2104
MIMAT0000741mmu-miR-377328795Ubash3auguuuucaacggaaACACACUa ||||||| gcacagagacaaaaUGUGUGAu29568589[mm9:17:31378891-31378912:+]0.50131407-13.59-0.7669
MIMAT0001091mmu-miR-410328795Ubash3auguCCG--GUAGACACAAUAUAa ||| | | | | |||||| ccuGGCAUCCUAUUUAUUAUAUu219676698[mm9:17:31378999-31379021:+]0.50231216-7.82-0.1252
MIMAT0001542mmu-miR-449a328795Ubash3auggucgauuguuauGUGACGGu ||||||| gcucagaccuucguCACUGCCa29168189[mm9:17:31378491-31378512:+]0.54721407-20.81-0.5028
MIMAT0003128mmu-miR-485328795Ubash3acuuaaGUAGUGCCGGUCGGAGa ::|| | ||||||||| ucugcUGUC-CUGCCAGCCUCu218198218[mm9:17:31378521-31378541:+]0.54721557-23.25-0.1931
MIMAT0003187mmu-miR-20b328795Ubash3agaUGGACGUGAUACUCGUGAAAc | ||| :| | |||||||| gcAGCUG-GC-ACCAGCACUUUa222476496[mm9:17:31378799-31378819:+]0.50321497-16.15-0.2433
MIMAT0004186mmu-miR-301b328795Ubash3acgaaacUGUUAUG--GUA-ACGUGAc ||| |:| ||| |||||| gauaccACAUUGCAACAUGUGCACUg218248273[mm9:17:31378571-31378596:+]0.53721246-16.43-0.4012
MIMAT0003727mmu-miR-374328795Ubash3agugaaucguccAACAUAAUAUa || ||||||| cauccuauuuaUUAUAUUAUAu212681702[mm9:17:31379004-31379025:+]0.50231477-4.98-1.1108
MIMAT0003460mmu-miR-449c328795Ubash3aggucgaucguuacGUGACGGa ||||||| cucagaccuucguCACUGCCa29169189[mm9:17:31378492-31378512:+]0.54721407-16.69-0.5063
MIMAT0005447mmu-miR-449b328795Ubash3acgGUC-GAUUGUUGUGACGGa ||| | |: ||||||| cuCAGACCUUCGUCACUGCCa219169189[mm9:17:31378492-31378512:+]0.54721457-18.95-0.5028
DNA & RNA Element - TRANSFAC
AccessionASDescriptionSpeciesEntrezPubmedBinding Info
G071804Ubash3aMus musculus328795
DNA & RNA Element - RepTar
Gene NamemiRNABeginEndProfile
Ubash3ammu-miR-511beg:62end:79pic:3' ACTCACGTCTCGT--TTTCCGTA 5'& .|. |||||||| &5' ---------GGTTACAAAGGCAT 3'
Ubash3ammu-miR-204beg:413end:427pic:3' TCCGTATCCTACTGTTTCCCTT 5'& ||| |||||||. &5' ----------TGA-AAAGGGAG 3'
Ubash3ammu-miR-218beg:969end:980pic:3' TGTACCAATCTAGTTCGTGTT 5'& |||||||| &5' ------------CAAGCACA- 3'
Ubash3ammu-miR-532-5pbeg:60end:79pic:3' TGCCAGGATGTGAGTTCCGTAC 5'& |.||| |||| ||||||| &5' ATGGT--TACA---AAGGCAT- 3'
Ubash3ammu-miR-343beg:411end:427pic:3' AGACCCGTGTACTTCCCTCT 5'& || ||||||| &5' -----GCTGAA-AAGGGAG- 3'
Ubash3ammu-miR-683beg:467end:490pic:3' CTCCTGT-GTCGAATGTCGTCC 5'& |||||| ||||| .|| ||| &5' -AGGACAGCAGCTGGCACCAG- 3'
Ubash3ammu-miR-877starbeg:626end:636pic:3' ACCCTCCTCCCTCTTCTCCTGT 5'& ||||||| &5' --------------AGAGGAC- 3'
Ubash3ammu-miR-302bbeg:476end:495pic:3' GATGATTTTGTACCT---TCGTGAAT 5'& |.| ||| ||||||| &5' -------AGC-TGGCACCAGCACTT- 3'
Ubash3ammu-miR-302abeg:481end:495pic:3' AGTGGTTTTGTACCTTCGTGAAT 5'& |||| ||||||| &5' -CACC----------AGCACTT- 3'
Ubash3ammu-miR-328beg:396end:409pic:3' TGCCTTCCCGTCTCTCCCGGTC 5'& ||| ||||||| &5' -------GGC----AGGGCCA- 3'
Ubash3ammu-miR-138starbeg:814end:832pic:3' GGGACCACAACACT--TCATCGGC 5'& ||||| ||||||| &5' --------TTGTGCTCAGTAGCC- 3'
Ubash3ammu-miR-574-5pbeg:129end:153pic:3' TGTGTGAGTGTGTGTG-TGTGAGT 5'& ||| |||||| | |.||||| &5' --ACAAA-ACACACTCGATACTCA 3'
Ubash3ammu-miR-138beg:476end:491pic:3' GCCGGACTAAGTGTTGTGGTCGA 5'& ||. ..||||||| &5' --GCT--------GGCACCAGC- 3'
Ubash3ammu-miR-34abeg:170end:190pic:3' TGTTGGTCGATTCTGTGACGGT 5'& .||| | |||||||| &5' --GACCTTCGT---CACTGCCA 3'
Ubash3ammu-miR-1186beg:476end:495pic:3' GTACGGAAATTAAGGTCGTGAG 5'& ||. ||||||||. &5' ---GCTGGCA---CCAGCACTT 3'
Ubash3ammu-miR-485beg:201end:219pic:3' CTTAAGTAGTGCCGGTCGGAGA 5'& .|| | |||||||||| &5' ------GTC-CTGCCAGCCTCT 3'
Ubash3ammu-miR-1962beg:946end:965pic:3' TACACAGGGTCACGGTCGGAGA 5'& | ||.| .|||||||| &5' ----G-CCTACC-TCAGCCTCT 3'
Ubash3ammu-miR-504beg:985end:1003pic:3' CTATCTCACGTC-TGGTCCCAGA 5'& |. | |||||||||| &5' --------GTTGTACCAGGGTCT 3'
Ubash3ammu-miR-145starbeg:6end:23pic:3' GTTCTTGTCATAAAGGTCCTTA 5'& ||.| |||||||||| &5' ---GAGC----TTTCCAGGAA- 3'
Ubash3ammu-miR-145starbeg:300end:312pic:3' GTTCTTGTCATAAAGGTCCTTA 5'& ||||||||| &5' ------------TTCCAGGAA- 3'
Ubash3ammu-miR-1933-5pbeg:800end:814pic:3' TTTGATTCTGGCTTGTGGTACTGA 5'& .||.||||||| &5' ------------GACGCCATGAC- 3'
Ubash3ammu-miR-3475beg:933end:950pic:3' AAGTTTGGTACACGGAGGTCT 5'& |..|||| ||||||| &5' ---AGGCCAT---CCTCCAG- 3'
Ubash3ammu-miR-99bstarbeg:0end:15pic:3' GCCTGGGTGTCTGTGCTCGAAC 5'& .||| | ||||||| &5' -------GCAGCC-CGAGCTT- 3'
Ubash3ammu-miR-1961beg:942end:959pic:3' AAGATTGATGATGGAGT 5'& || |.| |||||||| &5' -TCCAGC--CTACCTCA 3'
Ubash3ammu-let-7ibeg:944end:959pic:3' TTGTCGTGTTTGATGATGGAGT 5'& |||| |||||||| &5' --CAGC--------CTACCTCA 3'
Ubash3ammu-miR-98beg:944end:959pic:3' TTGTTATGTTGAATGATGGAGT 5'& ||.| |||||||| &5' -------CAGC---CTACCTCA 3'
Ubash3ammu-let-7fbeg:948end:959pic:3' TTGATATGTTAGATGATGGAGT 5'& |||||||| &5' --------------CTACCTCA 3'
Ubash3ammu-let-7gbeg:948end:959pic:3' TTGACATGTTTGATGATGGAGT 5'& |||||||| &5' --------------CTACCTCA 3'
Ubash3ammu-miR-351beg:139end:156pic:3' GTCCGAGTTTCCCGAGGAGTCCCT 5'& |||.| |||||||. &5' ----CTCGATA-----CTCAGGGG 3'
Ubash3ammu-miR-125a-5pbeg:146end:156pic:3' AGTGTCCAATTTCCCAGAGTCCCT 5'& |||||||. &5' ----------------CTCAGGGG 3'
Ubash3ammu-miR-106bbeg:480end:497pic:3' TAGACGTGACAGTCGTGAAAT 5'& |||| |||||||||| &5' ----GCAC---CAGCACTTTA 3'
Ubash3amghv-miR-M1-2beg:591end:611pic:3' TTTCTCCCCCTCTC-CCCCAGAC 5'& || || || |||||||| &5' -----GGAGGTTAGCGGGGTCTG 3'
Ubash3amcmv-miR-m108-2-5p.1beg:103end:123pic:3' GCCACGAGCGCAGCTCACTGGCG 5'& ||||| | |||||.| &5' -----CTCGCCCAGTGTGACTG- 3'
Ubash3amcmv-miR-m21-1beg:866end:886pic:3' GCCGAAC-TTGCACAGGGGATA 5'& || || || |||||.|| &5' --GCCTGCAAA--GTCCCTTA- 3'
Ubash3amcmv-miR-M23-2beg:627end:645pic:3' GGCGAACTGGCTCC-----GGGGGTA 5'& |||| .||||| &5' ----------GAGGACTCTTCCCCA- 3'
Ubash3amcmv-miR-m88-1starbeg:418end:436pic:3' GGCTACAGTCCC-CCA-GCCAGTA 5'& |||| | .||||| &5' --------AGGGAGCAATGGTCA- 3'
Ubash3amghv-miR-M1-3beg:284end:306pic:3' TTCGCGTTGAGGACGAGTGGAG 5'& || | |||| | |||||.|| &5' -AGAGGAACTGC--CTCACTTC 3'
Ubash3ammu-let-7abeg:282end:302pic:3' TTGATATGTTGGA-TGATGGAGT 5'& |||. |||.||||| &5' ------ACAGAGGAACTGCCTCA 3'
Ubash3ammu-let-7abeg:702end:723pic:3' TTGATATGTTGGATGATGGAGT 5'& ||. .| |.|||||||||.| &5' --CTG-GC-ATCTACTACCTTA 3'
Ubash3ammu-let-7bbeg:282end:302pic:3' TTGGTGTGTTGGA-TGATGGAGT 5'& |||. |||.||||| &5' ------ACAGAGGAACTGCCTCA 3'
Ubash3ammu-let-7bbeg:701end:723pic:3' TTGGTGTGTTGGATGATGGAGT 5'& || .| |.|||||||||.| &5' --CCTGGC-ATCTACTACCTTA 3'
Ubash3ammu-let-7cbeg:282end:302pic:3' TTGGTATGTTGGA-TGATGGAGT 5'& |||. |||.||||| &5' ------ACAGAGGAACTGCCTCA 3'
Ubash3ammu-let-7cbeg:705end:723pic:3' TTGGTATGTTGGATGATGGAGT 5'& .| |.|||||||||.| &5' ------GC-ATCTACTACCTTA 3'
Ubash3ammu-let-7dbeg:283end:301pic:3' TTGATACGTTGGA-TGATGGAGA 5'& ||. |||.|||| &5' -------CAGAGGAACTGCCTC- 3'
Ubash3ammu-let-7dbeg:702end:722pic:3' TTGATACGTTGGATGATGGAGA 5'& ||. || |.|||||||||. &5' --CTG-GC-ATCTACTACCTT- 3'
Ubash3ammu-let-7ebeg:282end:302pic:3' TTGATATGTTGGAG-GATGGAGT 5'& |||. ||.||||| &5' ------ACAGAGGAACTGCCTCA 3'
Ubash3ammu-let-7ebeg:702end:723pic:3' TTGATATGTTGGAGGATGGAGT 5'& ||. .| |.|| ||||||.| &5' --CTG-GC-ATCTACTACCTTA 3'
Ubash3ammu-let-7fbeg:282end:302pic:3' TTGATATGTTAGA-TGATGGAGT 5'& |||. |||.||||| &5' ------ACAGAGGAACTGCCTCA 3'
Ubash3ammu-let-7gbeg:280end:302pic:3' TTGACATGTTTGA-TGATGGAGT 5'& | |||.| |||.||||| &5' ----GAACAGAGGAACTGCCTCA 3'
Ubash3ammu-let-7gbeg:702end:723pic:3' TTGACATGTTTGATGATGGAGT 5'& ||| .|| |||||||||.| &5' --CTG-GCAT-CTACTACCTTA 3'
Ubash3ammu-miR-105beg:311end:332pic:3' TGGTGTTCGTAGACTCGTGAACC 5'& |.||| | || ||||||| &5' -CTACAGAC-TCCCCGCACTTG- 3'
Ubash3ammu-miR-106abeg:476end:496pic:3' GATGGACGTGACAATCGTGAAAC 5'& .|. |||| |||||||| &5' --GCTGGCACC---AGCACTTT- 3'
Ubash3ammu-miR-106bstarbeg:98end:119pic:3' CGTCGTTCATG-GGTGTCACGCC 5'& .||| | || |||||.| &5' -TAGCCTCT-CGCC-CAGTGTG- 3'
Ubash3ammu-miR-1188beg:775end:798pic:3' AGGACCGGG--TTGGAGTGTGGT 5'& ||| |||. |.|||| . | &5' -CCT-GCCTTGAGCCTCCTGTC- 3'
Ubash3ammu-miR-1197beg:912end:934pic:3' TCTTC-ATCTGGTACACAGGAT 5'& .|||| |||. |||||||.|| &5' GGAAGTTAGG--ATGTGTCTTA 3'
Ubash3ammu-miR-1199beg:159end:175pic:3' GGCGCGCTGGCCCTGAGTCT 5'& .|| |.|||||| &5' -------GCCATGGCTCAGA 3'
Ubash3ammu-miR-1beg:631end:654pic:3' TATGTATGAAGAAAT--GTAAGGT 5'& || |||| ||||||| &5' --ACT--CTTCCCCAGCCATTCCA 3'
Ubash3ammu-miR-122beg:639end:654pic:3' GTTTGTGGTAACAGTGTGAGGT 5'& ||| | ||.|||| &5' ------CCAG---C-CATTCCA 3'
Ubash3ammu-miR-125b-5pbeg:135end:157pic:3' AGTGTTCAATCCCAGAGTCCCT 5'& |||| |||||||. &5' -CACACTCGATA--CTCAGGGG 3'
Ubash3ammu-miR-128beg:40end:61pic:3' TTTCTCTGG---CCAAGTGACACT 5'& ||.| || .|||||| &5' ----AGGCACAAGGG--GCTGTGA 3'
Ubash3ammu-miR-135abeg:921end:943pic:3' AGTGTATCCTT------ATTTTTCGGTAT 5'& ||| ||.||.||||| &5' -------GGATGTGTCTTAGAAGGCCAT- 3'
Ubash3ammu-miR-135abeg:530end:555pic:3' AGTGT-ATCCTTATTTTTCGGTAT 5'& ||| ||| .||||||||. &5' --ACAGTAGTGCTTGAAAGCCATG 3'
Ubash3ammu-miR-135bbeg:533end:555pic:3' AGTGTATC-CTTACTTTTCGGTAT 5'& .||| | || ||||||||. &5' ----GTAGTGCTTG-AAAGCCATG 3'
Ubash3ammu-miR-137beg:411end:431pic:3' GATGCGCATAAGAATTCGTTATT 5'& || .||||||. &5' ----GCTGAAAAGGGAGCAATG- 3'
Ubash3ammu-miR-138starbeg:440end:451pic:3' GGGACCACAACACTTCATCGGC 5'& ||||.||| &5' -------------AAGTGGCC- 3'
Ubash3ammu-miR-148abeg:263end:274pic:3' TGTTTCAAGACATCACGTGACT 5'& ||||||||. &5' -------------GTGCACTGG 3'
Ubash3ammu-miR-148bbeg:263end:274pic:3' TGTTTCAAGACACTACGTGACT 5'& .|||||||. &5' -------------GTGCACTGG 3'
Ubash3ammu-miR-150starbeg:981end:998pic:3' GATAGGGGGTCCGG--ACATGGTC 5'& |||| |||||||| &5' ----------GGCCGTTGTACCAG 3'
Ubash3ammu-miR-150starbeg:632end:655pic:3' GATAGGGGGTCCGGACATGGTC 5'& || |.||||| ||| |||| &5' CTCTTCCCCA-GCCATT-CCAG 3'
Ubash3ammu-miR-151-3pbeg:728end:750pic:3' GGAGTTCCTCGGAGTCAGATC 5'& .|||| |||||.|.| &5' -TTCAAATCAA-TCAGTTTGG 3'
Ubash3ammu-miR-152beg:263end:274pic:3' GGTTCAAGACAGTACGTGACT 5'& .|||||||. &5' ------------GTGCACTGG 3'
Ubash3ammu-miR-17beg:476end:496pic:3' GATGGACGTGACATTCGTGAAAC 5'& .|. |||| |||||||| &5' --GCTGGCACC---AGCACTTT- 3'
Ubash3ammu-miR-184beg:653end:674pic:3' TGGGAATAGTCAAGAGGCAGGT 5'& |.|| || |||.|||| &5' ATCCAG---AGGCCTCTGTCC- 3'
Ubash3ammu-miR-184beg:951end:969pic:3' TGGGAATAGTCAAGAGGCAGGT 5'& || |||| |||.||.| &5' --CC---TCAGC-CTCTGTTC- 3'
Ubash3ammu-miR-1896beg:558end:577pic:3' GAGGAGTGGGTGGTAGTCTCTC 5'& |||| |.| |||||| &5' -TCCTAA--CGCA--CAGAGA- 3'
Ubash3ammu-miR-1906beg:771end:797pic:3' TC-GGGACGGAGTCCGAC-GACGT 5'& || ||||||||. || |||. &5' AGCCCCTGCCTTGAGCCTCCTGT- 3'
Ubash3ammu-miR-1907beg:489end:517pic:3' TGGAGGTCT---AGGA--GACGACGAG 5'& ||..||. |||| |||.||||| &5' --CTTTAGGGGTTCCTTGCTGTTGCTC 3'
Ubash3ammu-miR-1927beg:874end:898pic:3' AGTCAGGG-ATTGTAGGTCTCCAG 5'& |||||| ||.| |||.|||| &5' --AGTCCCTTAGCCA-CAGGGGTC 3'
Ubash3ammu-miR-1929beg:614end:632pic:3' GAGACGAGATATTTCAGGATCTT 5'& ||||| |.| |.|||||. &5' -----CTCTACAGA-TTCTAGAG 3'
Ubash3ammu-miR-1929beg:915end:936pic:3' GAGACGAGA-TATTTCAGGATCTT 5'& |.| ||. |||.||||| &5' ----GTTAGGATGT-GTCTTAGAA 3'
Ubash3ammu-miR-1933-5pbeg:154end:171pic:3' TTTGATTCTGGCTTGT-GGTACTGA 5'& |||.| |||||.|| &5' -----------GAATAGCCATGGCT 3'
Ubash3ammu-miR-1935beg:201end:221pic:3' TCTCTAGG-CGGTCGGAGACGGA 5'& .||| |||||||||||| &5' ----GTCCTGCCAGCCTCTGC-- 3'
Ubash3ammu-miR-1935beg:951end:968pic:3' TCTCTAGGCGGTCGGAGACGGA 5'& || .|||||||||.. &5' ------CC-TCAGCCTCTGTT- 3'
Ubash3ammu-miR-1935beg:650end:673pic:3' TCTCTAGGCGGTCGGAGACGGA 5'& ||| |||| .|||||||.| &5' AGA-ATCCAGAGGCCTCTGTC- 3'
Ubash3ammu-miR-194beg:496end:515pic:3' AGGTGTACCTCA----ACGACAATGT 5'& ||.|| |||||||.| &5' -------GGGGTTCCTTGCTGTTGC- 3'
Ubash3ammu-miR-1951beg:702end:719pic:3' ATCGGTGTGGTCAGAGGTGATG 5'& | | ||.||||| &5' --------CTGGCATCTACTAC 3'
Ubash3ammu-miR-195beg:498end:514pic:3' CGGTTATAAAGACACGACGAT 5'& ||| |||||.|. &5' --------TTCCTTGCTGTTG 3'
Ubash3ammu-miR-1957beg:603end:622pic:3' CAGTATACGAGATGGTGAC 5'& ||| |.||.|| |.|| &5' GTC-TGTGTTCCTCTAC-- 3'
Ubash3ammu-miR-1961beg:702end:723pic:3' AAGATTG---ATGATGGAGT 5'& ||..| ||||||||.| &5' --CTGGCATCTACTACCTTA 3'
Ubash3ammu-miR-1962beg:197end:219pic:3' TAC-ACAGGGTCACGGTCGGAGA 5'& || ||||| ||||||||||| &5' -TGCTGTCC---TGCCAGCCTCT 3'
Ubash3ammu-miR-1962beg:86end:108pic:3' TACACAGGGTCAC---GGTCGGAGA 5'& | ||| |.||||||| &5' ------CAAAGTTATCCTAGCCTCT 3'
Ubash3ammu-miR-1969beg:337end:353pic:3' TGGGTACAATTTCAGAGGTAGAA 5'& ||||| ||.||.|| &5' ACCCA----------TCTATTTT 3'
Ubash3ammu-miR-196abeg:701end:721pic:3' GGGTTGTTGTACTTTGATGGAT 5'& || .|| | ||||||| &5' CCTGGCATCT----ACTACCT- 3'
Ubash3ammu-miR-196bbeg:701end:721pic:3' GGGTTGTTGTCCTTTGATGGAT 5'& || .|| | ||||||| &5' CCTGGCATCT----ACTACCT- 3'
Ubash3ammu-miR-1982starbeg:634end:655pic:3' GGAGGGGTCCTGGGAGGGTT 5'& |.||||||| || |.|||. &5' CTTCCCCAG--CCATTCCAG 3'
Ubash3ammu-miR-19astarbeg:545end:562pic:3' CATCACGTTGATACGTTTTGAT 5'& |.| ||||||||.| &5' -------AGCCATGCAAAATT- 3'
Ubash3ammu-miR-205beg:108end:128pic:3' GTCTGAGGCCAC-CTTACTTCCT 5'& .| || ||| || ||.|||| &5' ---GC-CCAGTGTGACTGGAGGA 3'
Ubash3ammu-miR-206beg:631end:654pic:3' GGTGTGTGAAGGAAT--GTAAGGT 5'& || ||||| ||||||| &5' ----ACTCTTCCCCAGCCATTCCA 3'
Ubash3ammu-miR-20abeg:476end:497pic:3' GATGGACGTGATATTCGTGAAAT 5'& .|. |||| ||||||||| &5' --GCTGGCACC---AGCACTTTA 3'
Ubash3ammu-miR-20bbeg:476end:496pic:3' GATGGACGTGATACTCGTGAAAC 5'& .|. |||| |||||||| &5' --GCTGGCACC---AGCACTTT- 3'
Ubash3ammu-miR-211beg:413end:427pic:3' TCCGTTTCCTACTGTTTCCCTT 5'& ||| |||||||. &5' ----------TGA-AAAGGGAG 3'
Ubash3ammu-miR-2134beg:956end:979pic:3' CGTGGGGCAA-AGGGTTC-TG 5'& || |.|.||| |.||||| || &5' GC-CTCTGTTCTTCCAAGCAC 3'
Ubash3ammu-miR-2135beg:654end:670pic:3' CAAAGCCGGGGTTCTGGAGA 5'& .|| .||.||||| &5' -------TCCAGAGGCCTCT 3'
Ubash3ammu-miR-2136beg:324end:345pic:3' GTGTAGAGTCAGTTGTGGGTC 5'& ||| |. || . |||||| &5' CAC-TTGAAGATGCCACCCA- 3'
Ubash3ammu-miR-2141beg:291end:307pic:3' TTGAAAAGACT--GTGGAGGA 5'& ||| |||.||| &5' -------CTGCCTCACTTCC- 3'
Ubash3ammu-miR-24beg:775end:791pic:3' GACAAGGACGACTTGACTCGGT 5'& ||||| .|||||| &5' -----CCTGCC---TTGAGCC- 3'
Ubash3ammu-miR-24-2starbeg:386end:403pic:3' TGACAAAGTCGAGTCATCCGTG 5'& || |||| |||||| &5' ------TC-GCTCTTTAGGCA- 3'
Ubash3ammu-miR-26abeg:525end:548pic:3' TCGGATAGGACCTA-------ATGAACTT 5'& .|||| |.|||||| &5' --------TTGGAGACAGTAGTGCTTGAA 3'
Ubash3ammu-miR-26bstarbeg:268end:289pic:3' CTCGGTTCATTAC-CTCTTGTCC 5'& | .|| | |||||||| &5' ----CTGGTTTGGAGAGAACAG- 3'
Ubash3ammu-miR-28beg:495end:507pic:3' GAGTTATCTGACACTCGAGGAA 5'& |.|.||||| &5' -------------GGGTTCCTT 3'
Ubash3ammu-miR-290-5pbeg:740end:751pic:3' TTTCACGGGGGTATCAAACTCA 5'& ||||||.| &5' -------------AGTTTGGG- 3'
Ubash3ammu-miR-292-5pbeg:730end:751pic:3' GTTTTCTCGGGGGTCAAACTCA 5'& |||| | .|||||||.| &5' CAAAT---CAATCAGTTTGGG- 3'
Ubash3ammu-miR-293starbeg:734end:751pic:3' GTTTTACAGTGTGTCAAACTCA 5'& ||| |||||||.| &5' -------TCAATCAGTTTGGG- 3'
Ubash3ammu-miR-29bstarbeg:451end:472pic:3' ATTTGGTGGTATAC-TTTGGTCG 5'& |||||| ||||||| &5' ----CCACCAGATCAAAACCAG- 3'
Ubash3ammu-miR-3072starbeg:665end:687pic:3' GGACGGGAGGGAGCCCCAGGGA 5'& |||.|||.||| || |||. &5' -CTGTCCTTCCT-GGCATCCT- 3'
Ubash3ammu-miR-30bstarbeg:672end:688pic:3' CTGCATTTGTAGG--TGTAGGGTC 5'& ||| .|||||.| &5' ----------TCCTGGCATCCTA- 3'
Ubash3ammu-miR-30c-2starbeg:954end:974pic:3' TCTCATTTGTCGGA----AGAGGGTC 5'& |||||| |||.||| &5' --------CAGCCTCTGTTCTTCCA- 3'
Ubash3ammu-miR-30estarbeg:404end:421pic:3' CGACATTTGTA-GGCTGACTTTC 5'& ||| || .|||||| &5' --------CATACCAGCTGAAA- 3'
Ubash3ammu-miR-325beg:807end:830pic:3' AACTATCCTCCACGAGTTATTT 5'& ||| |||||||.||. &5' -TGACAAATTGTGCTCAGTAG- 3'
Ubash3ammu-miR-326beg:650end:665pic:3' TGACCTCCTTCCCGGGTCTCC 5'& || .||||||| &5' ---------AGAATCCAGAGG 3'
Ubash3ammu-miR-331-5pbeg:671end:692pic:3' CCTAGGGACCCTGGTATGGATC 5'& |.||||| |.| ||..|| &5' ---TTCCTGGCATCCTATTTA- 3'
Ubash3ammu-miR-335-3pbeg:421end:444pic:3' CCAGTCCTCGTTAT----TACTTTTT 5'& .||||||||. |||||||| &5' ----GGGAGCAATGGTCAATGAAAAA 3'
Ubash3ammu-miR-34b-5pbeg:179end:189pic:3' TGTTAGTCGATTAATGTGACGGA 5'& ||||||| &5' ---------------CACTGCC- 3'
Ubash3ammu-miR-34cbeg:167end:189pic:3' CGTTAGTCGATTGAT-GTGACGGA 5'& |||| ||||||| &5' ----TCAGACCTTCGTCACTGCC- 3'
Ubash3ammu-miR-375beg:113end:137pic:3' AGTGCGCTCGGCTTG----CTTGTTT 5'& |.|| |.|.| ||||||| &5' ----GTGA-CTGGAGGAAAGAACAAA 3'
Ubash3ammu-miR-375beg:407end:430pic:3' AGTGCGCTCGGCTTG---CTTGTTT 5'& .|| | |||.||| ||.||| &5' -TAC-C-AGCTGAAAAGGGAGCAA- 3'
Ubash3ammu-miR-377beg:106end:120pic:3' TGTTTTCAACGGAAACACACTA 5'& ||| |||||| &5' ---------GCCCA-GTGTGA- 3'
Ubash3ammu-miR-378beg:991end:1005pic:3' GGAAGACTGAGGT-TCAGGTCA 5'& ||| .|||.|| &5' ----------CCAGGGTCTAG- 3'
Ubash3ammu-miR-378starbeg:905end:925pic:3' TGTGTCCTGGACC-TCAGTCCTC 5'& || || || |||.|||| &5' -----GGTCCCGGAAGTTAGGA- 3'
Ubash3ammu-miR-378starbeg:228end:250pic:3' TGTGTC-CTGGACCTCAGTCCTC 5'& .||| | ||||| |.|||| &5' --GCAGAGGTCTGGA-TTAGGA- 3'
Ubash3ammu-miR-412beg:8end:30pic:3' GC-CGATCA--CCTGGTCCACTT 5'& | ||| ||| |||||| &5' -GAGCTTTCCAGGAAGAGGTGA- 3'
Ubash3ammu-miR-423-5pbeg:661end:677pic:3' TTTCAGAGCGAGAGACGGGGAGT 5'& || |||||.||.|| &5' --------GC-CTCTGTCCTTC- 3'
Ubash3ammu-miR-432beg:2end:22pic:3' GACGGGTGACTAGATGAGGTTCT 5'& ||||. || .||||.|| &5' --GCCCGAG---CT-TTCCAGGA 3'
Ubash3ammu-miR-432beg:291end:311pic:3' GACGG-GTGACTAGATGAGGTTCT 5'& ||||| |||| ||||.|| &5' CTGCCTCACT-------TCCAGGA 3'
Ubash3ammu-miR-448beg:251end:271pic:3' TACCCTGTAG-GATGTATACGTT 5'& ||||. | ||||.|||| &5' -----ACATTGCAACATGTGCA- 3'
Ubash3ammu-miR-449abeg:167end:190pic:3' TGGTCGATT-GTTATGTGACGGT 5'& .||| |. |||||||| &5' -TCAGACCTTCGT--CACTGCCA 3'
Ubash3ammu-miR-449bbeg:167end:189pic:3' CG-GTCGATT-GTTGTGACGGA 5'& || ||| |. ||||||| &5' GCTCAGACCTTCGTCACTGCC- 3'
Ubash3ammu-miR-449cbeg:168end:189pic:3' GGTCGATCGTTACGTGACGGA 5'& ||| .| ||||||| &5' -CAGACCTTCGT-CACTGCC- 3'
Ubash3ammu-miR-450a-3pbeg:627end:645pic:3' TACTTACGTTTC-GT--AGGGGTTA 5'& .|.| | ||||||. &5' --------GAGGACTCTTCCCCAG- 3'
Ubash3ammu-miR-450a-3pbeg:549end:567pic:3' TACTTACGTTTCGTAGGGGTTA 5'& ||||||| ||.||.|| &5' ----ATGCAAA--ATTCCTAA- 3'
Ubash3ammu-miR-450b-5pbeg:857end:879pic:3' ATAAGTCC-TTGTAT--GACGTTTT 5'& || ||| |||||||. &5' ------GGCAACTAAGCCTGCAAAG 3'
Ubash3ammu-miR-455starbeg:56end:79pic:3' GCTAC-ATCAG-GTTTCCGTGTAT 5'& ||| |.||. ||||||||. &5' -GATAATGGTTACAAAGGCAT--- 3'
Ubash3ammu-miR-455starbeg:920end:943pic:3' GCTACATCAGG--TTTCCGTGTAT 5'& ||||| |||. .||||| ||| &5' -GATGT-GTCTTAGAAGGC-CAT- 3'
Ubash3ammu-miR-470beg:2end:23pic:3' TGAGTGGTCACGGTCAGGTTCTT 5'& .|| | ||. ||||.||| &5' ----GCCCGAGCTT-TCCAGGAA 3'
Ubash3ammu-miR-470beg:295end:312pic:3' TGAGTGGTCACGGTCAGGTTCTT 5'& |||||. ||||.||| &5' -CTCACT--------TCCAGGAA 3'
Ubash3ammu-miR-485beg:949end:965pic:3' CTTAAGTAGTGCCGGTCGGAGA 5'& .|| .|||||||| &5' --------TACC-TCAGCCTCT 3'
Ubash3ammu-miR-485beg:91end:107pic:3' CTTAAGTAGTGCCGGTCGGAGA 5'& |.||| |.||||||| &5' ----TTATC----CTAGCCTCT 3'
Ubash3ammu-miR-485starbeg:106end:122pic:3' CTCTCCTCTCGGCACATACTGA 5'& ||| ||.||||| &5' ---------GCCCAGTGTGACT 3'
Ubash3ammu-miR-493beg:160end:180pic:3' GG-ACCGTGTGTCATCCTGGAAGT 5'& || |||| || ||||||| &5' CCATGGCTCA------GACCTTC- 3'
Ubash3ammu-miR-497beg:503end:514pic:3' ATGTTTGGTGTCACACGACGAC 5'& |||||.|| &5' --------------TGCTGTTG 3'
Ubash3ammu-miR-503beg:497end:514pic:3' GACGTCATGACAAGG-GCGACGAT 5'& ||||| .||||.|. &5' ----------GTTCCTTGCTGTTG 3'
Ubash3ammu-miR-541beg:866end:885pic:3' TCACACTGGTTGTAGTCTTAGGGAA 5'& .|| .|| |.|||||| &5' ------GCCTGCAA---AGTCCCTT 3'
Ubash3ammu-miR-541beg:546end:565pic:3' TCACACTGGTTGTAGTCTTAGGGAA 5'& .||| || |||.||| &5' ------GCCATG--CAAAATTCCT- 3'
Ubash3ammu-miR-547beg:980end:997pic:3' GAGTGAGTTTCTACATGGTTC 5'& | .| |. |||||||.| &5' -TGGC-CGT---TGTACCAGG 3'
Ubash3ammu-miR-592beg:507end:525pic:3' TGTAGTAGCGTATAACTGTGTTA 5'& .|.|| ||||||. &5' -----GTTGCTCG--GACACAG- 3'
Ubash3ammu-miR-654-3pbeg:995end:1010pic:3' TTCCACTACCAGTCGTCTGTAT 5'& |||| .||||||| &5' --------GGTC--TAGACATA 3'
Ubash3ammu-miR-669ebeg:457end:476pic:3' TACTTGTACGTGTGTGTTCTGT 5'& || || || ||.|||| &5' --GATCAAA---AC-CAGGACA 3'
Ubash3ammu-miR-669h-5pbeg:536end:557pic:3' CGTGAGTTGATATGTGGGTACGTA 5'& | || | | ||||||| &5' GTGCTTGAA-----AGCCATGCA- 3'
Ubash3ammu-miR-670beg:137end:156pic:3' AAGTGGTGTA-TGTGAGTCCCTA 5'& ||| |.||||||||. &5' -----CACTCGATACTCAGGGG- 3'
Ubash3ammu-miR-671-5pbeg:663end:687pic:3' GAGGTCGGGGAGGTCCCGAAGGA 5'& |||. |.||.||| ||| |||| &5' CTCT-GTCCTTCCT-GGCATCCT 3'
Ubash3ammu-miR-671-5pbeg:941end:965pic:3' GAGGTCGG--GGAGGTCCCGAAGGA 5'& |||||||| |||| || ||. &5' CTCCAGCCTACCTCA---GCCTCT- 3'
Ubash3ammu-miR-672beg:944end:964pic:3' AGTGTGTGTC--ATGTGGTTGGAGT 5'& ||| ||| .||.|||| &5' -------CAGCCTACCTCAGCCTC- 3'
Ubash3ammu-miR-673-5pbeg:39end:61pic:3' GAGGTTCC-TGG-TCTCGACACTC 5'& |||||| || .|.||||||| &5' --CCAAGGCACAAGGGGCTGTGA- 3'
Ubash3ammu-miR-680beg:319end:340pic:3' GGGGGTACAGTCGTCTACGGG 5'& ||||. ||||||| &5' -CCCCGCACTTGAAGATGCC- 3'
Ubash3ammu-miR-683beg:518end:540pic:3' CTCCTGTGTCGAA---TGTCGTCC 5'& ||| ||.| ||||.|| &5' ----ACAGAGTTGGAGACAGTAG- 3'
Ubash3ammu-miR-684beg:114end:134pic:3' AACTGAACTTCCC-TTTTGA 5'& |||| ||.||| |.||| &5' -TGAC-TGGAGGAAAGAAC- 3'
Ubash3ammu-miR-691beg:2end:23pic:3' AAAAGACGGA---GAGAAGTCCTTA 5'& ||| ||.| |||||| &5' ------GCCCGAGCTTTCCAGGAA- 3'
Ubash3ammu-miR-691beg:291end:312pic:3' AAAAGACGGAGAGAA-GTCCTTA 5'& ||||||| ||| |||||| &5' ----CTGCCTCACTTCCAGGAA- 3'
Ubash3ammu-miR-709beg:773end:794pic:3' AGGAGGACGGAGA-CGGAGG 5'& || |||||||. |||||| &5' -CC-CCTGCCTTGAGCCTCC 3'
Ubash3ammu-miR-758beg:49end:74pic:3' ATCACCTGGT-------CCAGTGTTT 5'& || ||.|.. |||.||||| &5' -AG-GGGCTGTGATAATGGTTACAAA 3'
Ubash3ammu-miR-761beg:491end:512pic:3' ACACAGTCAAAGTGGGACGACG 5'& |.|| ||.|||||. &5' ----TTAGGGGTTCCTTGCTGT 3'
Ubash3ammu-miR-762beg:199end:217pic:3' CGAGACAGGGCCGGGGTCGGGG 5'& ||||||.| ||||||.| &5' ---CTGTCCTG---CCAGCCTC 3'
Ubash3ammu-miR-762beg:941end:964pic:3' CGAGACAGGGCCGGGGTCGGGG 5'& ||| ||. ||.|||||.| &5' -CTCCAGCCTA-CCTCAGCCTC 3'
Ubash3ammu-miR-764-5pbeg:15end:36pic:3' TCCTCCTGTACACTCGTGG 5'& |||| || .|| || || &5' AGGAAGAGGTGACTGC-CC 3'
Ubash3ammu-miR-7abeg:954end:974pic:3' TGTTGTTTTAGTGATCAGAAGGT 5'& ||.| | ||. ||||||| &5' -CAGC-----CTCTGTTCTTCCA 3'
Ubash3ammu-miR-7bbeg:954end:974pic:3' TGTTGTTTTAGTGTTCAGAAGGT 5'& ||.| || ||||||| &5' -CAGCC---TCTGT--TCTTCCA 3'
Ubash3ammu-miR-872beg:814end:832pic:3' GGACTTGATTGTTCATTGGAA 5'& .|| .|| ||||.||| &5' -TTGTGCTC---AGTAGCCT- 3'
Ubash3ammu-miR-879beg:650end:670pic:3' CCGAATCTCGATA-TTCGGAGA 5'& ||| |.|||||| &5' -----AGAATCCAGAGGCCTCT 3'
Ubash3ammu-miR-93beg:476end:496pic:3' GATGGACGTGCTTGTCGTGAAAC 5'& .|. |||| ||||||||| &5' --GCTGGCAC---CAGCACTTT- 3'
Ubash3ammu-miR-93starbeg:815end:830pic:3' GCCCTTCACGATCGAGTCGTCA 5'& ||. ||||||.|| &5' -------TGT--GCTCAGTAG- 3'
Ubash3ammu-miR-98beg:282end:302pic:3' TTGTTATGTTGAA-TGATGGAGT 5'& |||. |||.||||| &5' ------ACAGAGGAACTGCCTCA 3'
Ubash3ammu-miR-98beg:705end:723pic:3' TTGTTATGTTGAATGATGGAGT 5'& .|| | ||||||||.| &5' ------GCATC-TACTACCTTA 3'
DNA & RNA Element - RAID2
Gene NameRAID IDInteractor 1Category 1ID 1Interactor 2Category 2ID 2MethodsScore
Ubash3aRAID00002215mmu-miR-15b-3pmiRNAMIMAT0004521Ubash3amRNA328795Prediction0.1828
Ubash3aRAID00120890mmu-miR-210-3pmiRNAMIMAT0000658Ubash3amRNA328795CLIP-seq//Prediction0.6308
Ubash3aRAID00181266mmu-miR-466m-3pmiRNAMIMAT0014883Ubash3amRNA328795Prediction0.1828
Ubash3aRAID00202820mmu-miR-106b-5pmiRNAMIMAT0000386Ubash3amRNA328795Prediction0.1828
Ubash3aRAID00277678mmu-miR-669e-3pmiRNAMIMAT0017330Ubash3amRNA328795Prediction0.1828
Ubash3aRAID00353743mmu-miR-135a-5pmiRNAMIMAT0000147Ubash3amRNA328795CLIP-seq//Prediction0.6308
Ubash3aRAID00398268mmu-miR-138-5pmiRNAMIMAT0000150Ubash3amRNA328795Prediction0.1828
Ubash3aRAID00476522mmu-miR-410-3pmiRNAMIMAT0001091Ubash3amRNA328795Prediction0.1828
Ubash3aRAID00582614mmu-miR-20a-5pmiRNAMIMAT0000529Ubash3amRNA328795Prediction0.1828
Ubash3aRAID00721450mmu-let-7g-5pmiRNAMIMAT0000121Ubash3amRNA328795Prediction0.1828
Ubash3aRAID00767155mmu-miR-17-5pmiRNAMIMAT0000649Ubash3amRNA328795Prediction0.1828
Ubash3aRAID00813048mmu-miR-466o-3pmiRNAMIMAT0014886Ubash3amRNA328795Prediction0.1828
Ubash3aRAID00870747mmu-miR-20b-5pmiRNAMIMAT0003187Ubash3amRNA328795Prediction0.1828
Ubash3aRAID00875120mmu-let-7e-5pmiRNAMIMAT0000524Ubash3amRNA328795Prediction0.1828
Ubash3aRAID00948326mmu-miR-6381miRNAMIMAT0025127Ubash3amRNA328795Prediction0.1828
Ubash3aRAID01012067mmu-miR-125a-5pmiRNAMIMAT0000135Ubash3amRNA328795Prediction0.1828
Ubash3aRAID01054318mmu-miR-137-3pmiRNAMIMAT0000149Ubash3amRNA328795Prediction0.1828
Ubash3aRAID01163951mmu-miR-196a-5pmiRNAMIMAT0000518Ubash3amRNA328795Prediction0.1828
Ubash3aRAID01509095mmu-miR-148b-3pmiRNAMIMAT0000580Ubash3amRNA328795Prediction0.1828
Ubash3aRAID01601077mmu-miR-351-5pmiRNAMIMAT0000609Ubash3amRNA328795Prediction0.1828
Ubash3aRAID01612376mmu-miR-196b-5pmiRNAMIMAT0001081Ubash3amRNA328795Prediction0.1828
Ubash3aRAID01625095mmu-miR-19b-3pmiRNAMIMAT0000513Ubash3amRNA328795Prediction0.1828
Ubash3aRAID01678064mmu-miR-152-3pmiRNAMIMAT0000162Ubash3amRNA328795Prediction0.1828
Ubash3aRAID01727227mmu-miR-374b-5pmiRNAMIMAT0003727Ubash3amRNA328795Prediction0.1828
Ubash3aRAID01729667mmu-miR-130b-3pmiRNAMIMAT0000387Ubash3amRNA328795Prediction0.1828
Ubash3aRAID01783286mmu-miR-135b-5pmiRNAMIMAT0000612Ubash3amRNA328795CLIP-seq//Prediction0.6308
Ubash3aRAID01867973mmu-miR-7077-5pmiRNAMIMAT0028060Ubash3amRNA328795Prediction0.1828
Ubash3aRAID01960482mmu-miR-212-5pmiRNAMIMAT0017053Ubash3amRNA328795Prediction0.1828
Ubash3aRAID02029311mmu-let-7i-5pmiRNAMIMAT0000122Ubash3amRNA328795Prediction0.1828
Ubash3aRAID02032368mmu-miR-1961miRNAMIMAT0009434Ubash3amRNA328795Prediction0.1828
Ubash3aRAID02067797mmu-miR-299a-3pmiRNAMIMAT0004577Ubash3amRNA328795Prediction0.1828
Ubash3aRAID02151314mmu-miR-34c-5pmiRNAMIMAT0000381Ubash3amRNA328795Prediction0.1828
Ubash3aRAID02294521mmu-miR-326-3pmiRNAMIMAT0000559Ubash3amRNA328795Prediction0.1828
Ubash3aRAID02317229mmu-miR-320-3pmiRNAMIMAT0000666Ubash3amRNA328795Prediction0.1828
Ubash3aRAID02393565mmu-miR-301b-3pmiRNAMIMAT0004186Ubash3amRNA328795Prediction0.1828
Ubash3aRAID02442850mmu-miR-6900-5pmiRNAMIMAT0027700Ubash3amRNA328795Prediction0.1828
Ubash3aRAID02514258mmu-miR-125b-5pmiRNAMIMAT0000136Ubash3amRNA328795Prediction0.1828
Ubash3aRAID02548843mmu-miR-324-5pmiRNAMIMAT0000555Ubash3amRNA328795Prediction0.1828
Ubash3aRAID02556199mmu-miR-98-5pmiRNAMIMAT0000545Ubash3amRNA328795Prediction0.1828
Ubash3aRAID02598523mmu-miR-449bmiRNAMIMAT0005447Ubash3amRNA328795Prediction0.1828
Ubash3aRAID02609321mmu-miR-211-5pmiRNAMIMAT0000668Ubash3amRNA328795Prediction0.1828
Ubash3aRAID02632024mmu-miR-449a-5pmiRNAMIMAT0001542Ubash3amRNA328795Prediction0.1828
Ubash3aRAID02651393mmu-miR-19a-3pmiRNAMIMAT0000651Ubash3amRNA328795Prediction0.1828
Ubash3aRAID02779411mmu-miR-106a-5pmiRNAMIMAT0000385Ubash3amRNA328795Prediction0.1828
Ubash3aRAID02993326mmu-miR-148a-3pmiRNAMIMAT0000516Ubash3amRNA328795Prediction0.1828
Ubash3aRAID03137992mmu-miR-34a-5pmiRNAMIMAT0000542Ubash3amRNA328795Prediction0.1828
Ubash3aRAID03195252mmu-miR-93-5pmiRNAMIMAT0000540Ubash3amRNA328795Prediction0.1828
Ubash3aRAID03287112mmu-miR-330-5pmiRNAMIMAT0004642Ubash3amRNA328795Prediction0.1828
Ubash3aRAID03305744mmu-miR-328-3pmiRNAMIMAT0000565Ubash3amRNA328795Prediction0.1828
Ubash3aRAID03307997mmu-miR-449c-5pmiRNAMIMAT0003460Ubash3amRNA328795Prediction0.1828
Ubash3aRAID03336524mmu-miR-485-5pmiRNAMIMAT0003128Ubash3amRNA328795Prediction0.1828
Ubash3aRAID03496368mmu-miR-543-5pmiRNAMIMAT0017207Ubash3amRNA328795Prediction0.1828
Ubash3aRAID03496381mmu-miR-7021-3pmiRNAMIMAT0027947Ubash3amRNA328795Prediction0.1828
Ubash3aRAID03622387mmu-miR-377-3pmiRNAMIMAT0000741Ubash3amRNA328795CLIP-seq//Prediction0.6308
Ubash3aRAID03744052mmu-miR-204-5pmiRNAMIMAT0000237Ubash3amRNA328795Prediction0.1828
Ubash3aRAID04036607mmu-miR-34b-5pmiRNAMIMAT0000382Ubash3amRNA328795Prediction0.1828
Ubash3aRAID04039427mmu-miR-130a-3pmiRNAMIMAT0000141Ubash3amRNA328795Prediction0.1828