Zc3h12a
DNA & RNA Element - AREsite
Gene NameMotifCDS AreaARE AreaEvidence
Zc3h12a; Mcpip; Mcpip1ATTTA141-19312148-2152;2532-2536
DNA & RNA Element - miRTarBase
Target Gene (Entrez ID)miRTarBase IDmiRNASpecies (miRNA)Target GeneSpecies (Target Gene)ExperimentsSupport TypeReferences (PMID)
MIRT588408mmu-miR-126a-5pMus musculusZc3h12a230738Mus musculusHITS-CLIPFunctional MTI (Weak)25083871
MIRT588412mmu-miR-297a-5pMus musculusZc3h12a230738Mus musculusHITS-CLIPFunctional MTI (Weak)25083871
MIRT606076mmu-miR-434-3pMus musculusZc3h12a230738Mus musculusHITS-CLIPFunctional MTI (Weak)21258322
MIRT588411mmu-miR-297b-5pMus musculusZc3h12a230738Mus musculusHITS-CLIPFunctional MTI (Weak)25083871
MIRT588414mmu-miR-717Mus musculusZc3h12a230738Mus musculusHITS-CLIPFunctional MTI (Weak)25083871
MIRT588414mmu-miR-717Mus musculusZc3h12a230738Mus musculusHITS-CLIPFunctional MTI (Weak)21258322
MIRT588409mmu-miR-675-3pMus musculusZc3h12a230738Mus musculusHITS-CLIPFunctional MTI (Weak)25083871
MIRT588410mmu-miR-297c-5pMus musculusZc3h12a230738Mus musculusHITS-CLIPFunctional MTI (Weak)25083871
MIRT606077mmu-miR-1933-3pMus musculusZc3h12a230738Mus musculusHITS-CLIPFunctional MTI (Weak)21258322
MIRT588413mmu-miR-3097-3pMus musculusZc3h12a230738Mus musculusHITS-CLIPFunctional MTI (Weak)25083871
MIRT588413mmu-miR-3097-3pMus musculusZc3h12a230738Mus musculusHITS-CLIPFunctional MTI (Weak)21258322
MIRT603102mmu-miR-5119Mus musculusZc3h12a230738Mus musculusHITS-CLIPFunctional MTI (Weak)21258322
DNA & RNA Element - microRNA
Mirbase AccmiRNA NameGene IDGene SymbolmiRNA AlignmentAlignmentGene AlignmentmiRNA StartmiRNA EndGene StartGene EndGenome CoordinatesConservationAlign ScoreSeed CatEnergymirSVR Score
MIMAT0004519mmu-let-7g*230738Zc3h12acguUCCGUCACCGGACAUGUCa | |:| || : ||||||| cacAUGUA-UGCUGUGUACAGa220574594[mm9:4:124795929-124795949:-]0.52591497-13.44-0.3261
MIMAT0004546mmu-miR-202-5p230738Zc3h12auuucUUCAUAUACGUAUCCUu ||| ||| ||||||| accaAAG-AUA-CCAUAGGAu218117135[mm9:4:124796388-124796406:-]0.60301497-10.75-0.3602
MIMAT0000375mmu-miR-297a230738Zc3h12auguacGUGU-ACGUG--UGUAUGUa :||| ||:|| ||||||| acagcUACAGUGUACUUACAUACAa218788812[mm9:4:124795711-124795735:-]0.49961557-17.76-1.1646
MIMAT0004583mmu-miR-130b*230738Zc3h12aucaucacguugucccUUUCUCa |||||| aauaaaucuuuuaaaAAAGAGa28814835[mm9:4:124795688-124795709:-]0.49961206-5.41-0.1871
MIMAT0004633mmu-miR-27a*230738Zc3h12aacgaguguucgucGAUUCGGGa :||||||| gcaagaugcuucuUUAAGCCCc210464485[mm9:4:124796038-124796059:-]0.65461417-16.35-0.6130
MIMAT0004635mmu-miR-92a*230738Zc3h12acaUUACGG---UGGUUAGGGGUGGa :| ||| :|::: ||||||| caGAGGCCUGAGCUGGACCCCACCu221314338[mm9:4:124796185-124796209:-]0.55761477-23.19-0.1173
MIMAT0000549mmu-miR-322*230738Zc3h12acacaACGUCGCGAAGUACAAa || || |||||||||| ggcaUG-AG-GCUUCAUGUUa218441459[mm9:4:124796064-124796082:-]0.61531577-17.61-0.5691
MIMAT0004640mmu-miR-325230738Zc3h12aaacuauccuccacgaGUUAUUu |||||| caguguacuuacauaCAAUAAu28795816[mm9:4:124795707-124795728:-]0.49961206-4.92-0.1301
MIMAT0004653mmu-miR-342-5p230738Zc3h12agaguuagugucuaUCGUGGGGa :||||||| guucuggccccgcGGCACCCCa210138159[mm9:4:124796364-124796385:-]0.60301417-17.40-0.1255
MIMAT0000706mmu-miR-362-5p230738Zc3h12auaAGUGUGG-AUCCAAGGU-UCCUAa ||| ||| || | ||| ||||| ccUCAAACCAAAGAUACCAUAGGAUu223111136[mm9:4:124796387-124796412:-]0.60301330-15.50-0.1657
MIMAT0004704mmu-miR-335-3p230738Zc3h12accaguccucguuaUUACUUUUu |||||||| uuuaaauauuuuaAAUGAAAAa210602623[mm9:4:124795900-124795921:-]0.52511457-7.08-1.2159
MIMAT0003726mmu-miR-675-3p230738Zc3h12augaCUCGCCAAUCCCGUA-UGUc |:|| | | |||||| ||| aagGGGCUG-UCGGGCAUCACAg2201637[mm9:4:124796486-124796507:-]0.47111250-22.03-0.1084
MIMAT0003726mmu-miR-675-3p230738Zc3h12augacucgccaaucccGUAUGUc |||||| gcuacaguguacuuaCAUACAa28791812[mm9:4:124795711-124795732:-]0.49961206-8.81-0.1464
MIMAT0003728mmu-miR-374*230738Zc3h12agagccUGUUAC-U--AU-UAUGUUGg |||:|| | || ||||||: cagcuACAGUGUACUUACAUACAAUa218789814[mm9:4:124795709-124795734:-]0.49961340-10.68-0.1178
MIMAT0003895mmu-miR-764-3p230738Zc3h12auguCAACGGUGAUACCGG-AGGa | ||||: | |||| ||| gacGCUGCCGGUCAGGCCGUCCa220226248[mm9:4:124796275-124796297:-]0.61731230-20.72-0.3467
MIMAT0003737mmu-miR-666-5p230738Zc3h12accgagagugucgacACGGGCGa ||||||| uuaagccccuccccUGCCCGCu29477498[mm9:4:124796025-124796046:-]0.58291407-18.82-0.1508
MIMAT0003740mmu-miR-674230738Zc3h12aauguggugaggguaGAGUCACg ||||||| ggcuggagagauggCUCAGUGg29654675[mm9:4:124795848-124795869:-]0.49961407-12.20-0.1450
MIMAT0004825mmu-miR-423-5p230738Zc3h12auuucaGAGCGAGAGACGGGGAGu ||: ||:| ||||||| agaugCUU-CUUUAAGCCCCUCc219467488[mm9:4:124796035-124796056:-]0.65461527-21.56-0.6604
MIMAT0003462mmu-miR-684230738Zc3h12aaacUGAACUUC--CCUUUUGa :|| ||| ||||||| aauGCUAUAAGAAGGAAAACa217141161[mm9:4:124803664-124803684:-]0.50351477-10.11-0.9840
MIMAT0003464mmu-miR-686230738Zc3h12aagaaguggcagACCCUUCGUUa || ||||||| uucuugauaaaUGAGAAGCAAa212188209[mm9:4:124803616-124803637:-]0.50351477-13.88-1.1880
MIMAT0003471mmu-miR-692230738Zc3h12acucacuccgcgagUUUCUCUa ||||||| uaaaucuuuuaaaAAAGAGAg29816836[mm9:4:124795687-124795707:-]0.49961407-7.60-0.9179
MIMAT0004189mmu-miR-693-3p230738Zc3h12aaaugUCGGUGUAGACUUUCGACg || ||| | ||||||| gugaAGGAACA-C-AAAAGCUGu2205171[mm9:4:124803754-124803774:-]0.48671437-13.12-0.2879
MIMAT0003480mmu-miR-297b-5p230738Zc3h12auguacAAGU-ACGUG--UGUAUGUa | || ||:|| ||||||| acagcUACAGUGUACUUACAUACAa218788812[mm9:4:124795711-124795735:-]0.49961517-14.38-1.1646
MIMAT0003742mmu-miR-455230738Zc3h12acacauAUACGGGCACCUGACg | | |:| ||||||| uuggcUUUUCUCUUGGACUGg2173151[mm9:4:124803774-124803794:-]0.46611527-15.53-0.2001
MIMAT0003493mmu-miR-703230738Zc3h12aaagaaaggaagacUUCCAAaa |||||| auuuuaaaugaaaAAGGUUga39609629[mm9:4:124795894-124795914:-]0.52511200-6.38-0.1570
MIMAT0003496mmu-miR-706230738Zc3h12aaaaaaacucuGUCC---CAAAGAGa |||| ||||||| aagacuuccuCAGGGCUGUUUCUCc213116140[mm9:4:124803685-124803709:-]0.50351437-14.43-0.4598
MIMAT0003502mmu-miR-712230738Zc3h12accAUGGCGGGCCCACUUCCUc | ::| | ||||||||| ucUCUUGGACUGGUGAAGGAa2203959[mm9:4:124803766-124803786:-]0.46611557-17.58-0.3394
MIMAT0003510mmu-miR-717230738Zc3h12aucucuuccauagagACAGACUc ||||||| gcccucuucuggggUGUCUGAa29765786[mm9:4:124795737-124795758:-]0.49961407-16.63-0.1317
MIMAT0004837mmu-miR-615-5p230738Zc3h12acuaGGCUCGUGGC-C--CCUGGGGg | ||| |:| | ||||||| gagCAGAGGCCUGAGCUGGACCCCa220311335[mm9:4:124796188-124796212:-]0.55761457-27.89-0.2798
MIMAT0004237mmu-miR-742230738Zc3h12aaaaugggucguaccACCGAAAg ||||||| uugggaagggggcuUGGCUUUu291839[mm9:4:124803786-124803807:-]0.46611407-11.22-0.2911
MIMAT0004840mmu-miR-743b-3p230738Zc3h12aagAUAAGUCGUACUAC--AGAAAg || | |||| |||| ||||| guUAGUAAGCAAGAUGCUUCUUUa221456479[mm9:4:124796044-124796067:-]0.65461240-13.86-0.4717
MIMAT0004846mmu-miR-881230738Zc3h12aagauaaguCUUUUCUGUGU-CAa |::|:|||||| || ccauggguGGGAGGACACAUGUa215559581[mm9:4:124795942-124795964:-]0.50761220-14.95-0.1951
MIMAT0004865mmu-miR-297c230738Zc3h12auguacAUGU-ACGUG--UGUAUGUa |||| ||:|| ||||||| acagcUACAGUGUACUUACAUACAa218788812[mm9:4:124795711-124795735:-]0.49961597-16.54-1.1646
MIMAT0004883mmu-miR-466g230738Zc3h12aacacacacguacACAGACAUa |||||||| ------------UGUCUGUAg21019[mm9:4:124803816-124803824:-]0.46611457-9.81-0.1096
MIMAT0005834mmu-miR-466i230738Zc3h12aaucacacaUACACAC-ACACAUa |||| || |||||| gaggacacAUGUAUGCUGUGUAc215569591[mm9:4:124795932-124795954:-]0.52681266-11.81-0.3841
MIMAT0005859mmu-miR-1198230738Zc3h12agguucgguCGGUCCUU-GUGUAu |:||| || ||||| guucaaauGUCAGCAACCACAUg215710732[mm9:4:124795791-124795813:-]0.49961220-16.05-0.1625
MIMAT0007866mmu-miR-1905230738Zc3h12agauggcgcaccACCCUGACCAc | |||||||| uggcuuuucucUUGGACUGGUg2123253[mm9:4:124803772-124803793:-]0.46611477-19.83-0.1211
MIMAT0009397mmu-miR-1933-3p230738Zc3h12auaucaguguGACUACCAGGACc |||| ||||||| acugcucuuCUGAAGGUCCUGa214688709[mm9:4:124795814-124795835:-]0.49961577-19.27-0.6557
MIMAT0009402mmu-miR-1938230738Zc3h12acuggcuuGAUGUUC-AGGGUGGc ||:::|| ||||||| aagcuguCUGUGAGAUCCCACCa2166587[mm9:4:124803738-124803760:-]0.50731547-24.63-0.8621
MIMAT0009407mmu-miR-1942230738Zc3h12aguugGUCUACU-UCUGUAGACu ::| | | | ||||||| auggUGGCUCACAAACAUCUGu218730751[mm9:4:124795772-124795793:-]0.49961447-12.57-0.3166
MIMAT0009427mmu-miR-669n230738Zc3h12auguguguaggugUGUGUUUa ||||||| acuggugaaggaACACAAAa294766[mm9:4:124803759-124803778:-]0.48671407-6.33-0.3383
MIMAT0009459mmu-miR-1982*230738Zc3h12aggAGGGGUCCUGGGAGGGUu |::||| | ||||||| ugUUUCCA-CA-CCUCCCAu219545562[mm9:4:124795961-124795978:-]0.48841467-20.61-0.1849
MIMAT0011217mmu-miR-2141230738Zc3h12auuGAAAAGACUGUGGAGGa || ||: |||||||| cuCUGUUUCCACACCUCCc218542560[mm9:4:124795963-124795981:-]0.48841577-17.26-0.4028
MIMAT0011222mmu-miR-2146230738Zc3h12aguGUACCUUGGGAAGAGGUg || ||: : :||||||| cuCA-GGGCUGUUUCUCCAa219124142[mm9:4:124803683-124803701:-]0.50351487-18.10-0.9569
MIMAT0012774mmu-miR-664230738Zc3h12aauccgaccccucAUUUACUUau |||||||| auuuaaauauuuUAAAUGAAaa311601622[mm9:4:124795901-124795922:-]0.52511300-4.49-0.1064
MIMAT0014853mmu-miR-3072230738Zc3h12aucuuccGAAGGA---CC-UCCCCCGu |||||| || ||||||| guagcuCUUCCUUUGGGAAGGGGGCu217631[mm9:4:124803794-124803819:-]0.46611547-26.77-0.2116
MIMAT0015643mmu-miR-3472230738Zc3h12accaaggaaggucgaagaCCGAUAAu ||||||| aagguugacaaaauaaaGGCUAUUg29622646[mm9:4:124795877-124795901:-]0.51251407-13.36-0.4510
MIMAT0000124mmu-miR-15b230738Zc3h12aacAUUUGGUACUACAC-GACGAu | |: || ||||| ||||| agUUAGGCACCAUGUGCCUGCUc221374396[mm9:4:124796127-124796149:-]0.60981280-17.29-0.2531
MIMAT0000135mmu-miR-125a-5p230738Zc3h12aaguguccAAUUUCCCA--GAGUCCCu |||||| | ||||||| uuaagccUUAAAGACUUCCUCAGGGc218106131[mm9:4:124803694-124803719:-]0.50541567-16.46-0.2175
MIMAT0000136mmu-miR-125b-5p230738Zc3h12aaguguucaaucccaGAGUCCCu ||||||| gccuuaaagacuucCUCAGGGc29110131[mm9:4:124803694-124803715:-]0.50541407-13.34-0.2235
MIMAT0000142mmu-miR-9230738Zc3h12aaguaugucgaucuaUUGGUUUCu |||||||| caagggaauccucaAACCAAAGa210102124[mm9:4:124796399-124796421:-]0.53701457-15.00-0.9121
MIMAT0000211mmu-miR-182230738Zc3h12agccacacUCAAG-AUGGUAACGGUUu || || |:| ||||||| ggaaaacAGCUCAAAUCCUUGCCAAg219154179[mm9:4:124803646-124803671:-]0.50351537-14.05-0.2757
MIMAT0000224mmu-miR-194230738Zc3h12aagGUGUACCUCAACGACA-AUGu |||||| | |||||| ||| gaCACAUGUA--UGCUGUGUACa221572592[mm9:4:124795931-124795951:-]0.52681330-20.21-0.3733
MIMAT0000246mmu-miR-122230738Zc3h12aguuuGUGGUAACAGUGU-GAGGu | |::|| |||| |||| ggccCUCUGUUUCCACACCUCCc219538560[mm9:4:124795963-124795985:-]0.48841220-14.91-0.4436
MIMAT0004576mmu-miR-296-3p230738Zc3h12accucUCGGAGGUGGG-UUGGGAg :||: ::||| |||||| ccguGGCUGAUGCCCAAACCCUc219250272[mm9:4:124796251-124796273:-]0.61731226-23.15-0.5832
MIMAT0000526mmu-miR-15a230738Zc3h12aguguUUGGUAAUACAC-GACGAu |: || ||||| ||||| aguuAGGCACCAUGUGCCUGCUc219374396[mm9:4:124796127-124796149:-]0.60981260-14.91-0.2553
MIMAT0000538mmu-miR-31230738Zc3h12agucgauacggucguaGAACGGa |||||| aaaacagcucaaaucCUUGCCa28156177[mm9:4:124803648-124803669:-]0.50351206-15.08-0.1072
MIMAT0000609mmu-miR-351230738Zc3h12aguCCGAGUUUCCCGAGGAGUCCCu | ||:|||| :||||||||| aaGCCUUAAAGACUUCCUCAGGGc223108131[mm9:4:124803694-124803717:-]0.50541787-30.29-0.2155
MIMAT0000671mmu-miR-224230738Zc3h12auugccUUGGUGAUCAC-UGAAu |:|:|| |||| |||| aagacAGCUAC-AGUGUACUUa217785805[mm9:4:124795718-124795738:-]0.49961220-15.51-0.6577
MIMAT0003453mmu-miR-497230738Zc3h12aauguUUGGUGUCACAC-GACGAc |: ||| |||| ||||| aguuAGGCACCAUGUGCCUGCUc219374396[mm9:4:124796127-124796149:-]0.60981260-17.07-0.2599
MIMAT0003513mmu-miR-505230738Zc3h12aucuUUUGGUCGUUCACAACUGc |||: | || |||||| uuuAAAUGA-AAAAGGUUGACa220611631[mm9:4:124795892-124795912:-]0.52511216-11.78-0.2675
MIMAT0004853mmu-miR-874230738Zc3h12aagccAGGGAGCCCG-GUCCCGUc ||||| | | ||||||| cucaUCCCU-GUUCACAGGGCAu219424445[mm9:4:124796078-124796099:-]0.61531517-21.66-0.2208
MIMAT0004869mmu-miR-421230738Zc3h12acgcgggUUAAUUA--CAGACAACUa || |:|| ||||||| ggucagAAGUGAUCACCCUGUUGAu218174198[mm9:4:124796325-124796349:-]0.61731447-14.22-0.2581
DNA & RNA Element - TRANSFAC
AccessionASDescriptionSpeciesEntrezPubmedBinding Info
G040721Zc3h12aMus musculus230738
DNA & RNA Element - RepTar
Gene NamemiRNABeginEndProfile
Zc3h12ammu-miR-297abeg:794end:812pic:3' TGTACGTGTACGTGTGTATGTA 5'& .||.|| .||||||| &5' --GTGTACT----TACATACA- 3'
Zc3h12ammu-miR-297b-5pbeg:794end:812pic:3' TGTACAAGTACGTG--TGTATGTA 5'& .||.|| ||||||| &5' --------GTGTACTTACATACA- 3'
Zc3h12ammu-miR-297cbeg:794end:812pic:3' TGTACATGTACGTGTGTATGTA 5'& .||||| .||||||| &5' --GTGTACT----TACATACA- 3'
Zc3h12ammu-miR-9beg:113end:125pic:3' AGTATGTCGATCTATTGGTTTCT 5'& ||||||||| &5' --------------AACCAAAGA 3'
Zc3h12ammu-miR-2141beg:544end:560pic:3' TTGAAAAGACTGTGGAGGA 5'& |||| |||||||| &5' ----TTTCC-ACACCTCC- 3'
Zc3h12amghv-miR-M1-7-5pbeg:322end:340pic:3' TCCAATGGCGTGGAGGTGGAAA 5'& .|.| ||| ||||||| &5' -----GCTGGACC-CCACCTT- 3'
Zc3h12ammu-miR-762beg:39end:56pic:3' CGAGACAGGGCC-GGGGTCGGGG 5'& ||| |||||||||| &5' ---------CGGTCCCCAGCCCC 3'
Zc3h12ammu-miR-92astarbeg:319end:339pic:3' CATTACGGTGGTTAGGGGTGGA 5'& || .| . |||||||| &5' ----TGA-GCTGGACCCCACCT 3'
Zc3h12ammu-miR-1982starbeg:544end:562pic:3' GGAGGGGTCCTGGGAGGGTT 5'& | ||| ||||||| &5' --TTTCCACA--CCTCCCA- 3'
Zc3h12ammu-miR-674beg:665end:675pic:3' ATGTGGTGAGGGTAGAGTCACG 5'& ||||||| &5' --------------CTCAGTG- 3'
Zc3h12ammu-miR-342-5pbeg:145end:159pic:3' GAGTTAGTGTCTATCGTGGGGA 5'& |.| .||||||| &5' ------CGC----GGCACCCC- 3'
Zc3h12ammu-miR-744beg:132end:149pic:3' ACGACAATCGGGATCGGGGCGT 5'& ||.|..||.||||||| &5' -----TTGGTTCTGGCCCCGC- 3'
Zc3h12ammu-miR-423-5pbeg:469end:488pic:3' TTTCAGAGCG-AGAGA--CGGGGAGT 5'& || |||.| ||||||| &5' --------GCTTCTTTAAGCCCCTC- 3'
Zc3h12ammu-miR-293beg:138end:156pic:3' TGTGATGTTTGAGACGCCGTGA 5'& | .| | ||||||| &5' ------CTGGCCCCGCGGCAC- 3'
Zc3h12ammu-miR-3472beg:636end:647pic:3' CCAAGGAAGGTCGAAGACCGATAAT 5'& |||||||. &5' -----------------GGCTATTG 3'
Zc3h12ammu-miR-1933-3pbeg:690end:709pic:3' TATCAGTGTGACTACCAGGACC 5'& || |||| ||||||| &5' ----TCTT-CTGAAGGTCCTG- 3'
Zc3h12amcmv-miR-m108-1beg:164end:182pic:3' GCTGTGCTCGGTGG---CAGTCTTT 5'& ||.| |||||||. &5' ---------CCGCACAGGTCAGAAG 3'
Zc3h12ammu-miR-532-3pbeg:284end:304pic:3' ACGTTCGGAACCCACACCCTCC 5'& | .||| || |||||||| &5' -GAGGGCC---GG-GTGGGAGG 3'
Zc3h12amcmv-miR-M23-2beg:34end:51pic:3' GGCGAACTGGCTCCGGGGGTA 5'& ||. | ||.||||| &5' ------GATAGCGGTCCCCA- 3'
Zc3h12ammu-miR-1188beg:136end:160pic:3' AGGACCGGGTTGGAGTGTGGT 5'& |.||||||| .| ||| ||| &5' TTCTGGCCCCGCGGCACCCCA 3'
Zc3h12ammu-miR-1199beg:652end:673pic:3' GGCGCGCTGGCC------CTGAGTCT 5'& |.|.|| |.||||| &5' ------GGCTGGAGAGATGGCTCAG- 3'
Zc3h12ammu-miR-127starbeg:436end:455pic:3' TAGTCTCGGGAGACT-CGAAGTC 5'& |||.|| ||| |||||| &5' --CAGGGCA---TGAGGCTTCA- 3'
Zc3h12ammu-miR-145beg:313end:332pic:3' TCCCTAAGGACCCTTTTGACCTG 5'& || |||| |.|||||| &5' ---GAGGCCTG----AGCTGGAC 3'
Zc3h12ammu-miR-145beg:58end:82pic:3' TCCCTAA-GGACCCTTTTGACCTG 5'& || ||||| ||.|||||| &5' -GGCCTACCCTGG--AAGCTGGAC 3'
Zc3h12ammu-miR-150beg:580end:602pic:3' GTGAC-CATGTTCCCAACCCTCT 5'& .||| |||||. || |||| &5' -GCTGTGTACAGAGGC---GAGA 3'
Zc3h12ammu-miR-150beg:292end:313pic:3' GTGACCATGTTCCCAACCCTCT 5'& |||. .||| ||||.|| &5' ----GGTGGGAGGCATGGGGGA 3'
Zc3h12ammu-miR-184beg:485end:506pic:3' TGGGAATAGTCAAGAGGCAGGT 5'& |||| |||.||||| &5' -CCCTGCCCG---CTCTGTCCA 3'
Zc3h12ammu-miR-1904beg:304end:318pic:3' GGAGGGAGGTCTCCTCGTCTTG 5'& .|.||||||||. &5' ---------GGGGGAGCAGAG- 3'
Zc3h12ammu-miR-1937cbeg:759end:780pic:3' ACC-CCCGAGAAGGCCCTA 5'& || | ||||||.|||.| &5' -GGTGCCCTCTTCTGGGGT 3'
Zc3h12ammu-miR-1937cbeg:348end:357pic:3' ACCCCCGAGAAGGCCCTA 5'& |.|||| &5' -----------CTGGGA- 3'
Zc3h12ammu-miR-193starbeg:528end:543pic:3' AGTAGAACGGGCGTTTCTGGGT 5'& ||.| | |||.||| &5' -------GCTC-C-AAGGCCC- 3'
Zc3h12ammu-miR-1940beg:536end:553pic:3' TTGACGAGGTGGAAGAGTCAGGAGGTA 5'& .|| ||| ..|||| &5' ---------GCC--CTCTG-TTTCCA- 3'
Zc3h12ammu-miR-1944beg:17end:39pic:3' TTAGTCTTGAACTGTAAGTCGTGTCTC 5'& .|..| || |. || |||||| &5' ----GGGGC-TGTCGGGCATCACAGA- 3'
Zc3h12ammu-miR-1946abeg:37end:64pic:3' TTTTCACACACGG--TGGTGACGGGCCGA 5'& || | || || .|| |||||.||| &5' ---AGCG-GTCCCCAGCCCCTGCCTGGC- 3'
Zc3h12ammu-miR-1946bbeg:41end:64pic:3' TTTTCGTACACGG--TGGTGACGGGCCG 5'& || || .|| |||||.||| &5' --------GTCCCCAGCCCCTGCCTGGC 3'
Zc3h12ammu-miR-1948beg:48end:63pic:3' GACATGCTCACGA-GACGGATTT 5'& || ||||||.. &5' ----------GCCCCTGCCTGG- 3'
Zc3h12ammu-miR-1967beg:94end:116pic:3' CGTAGAAGAGGGGTCC-TAGGAGT 5'& ||| | .|| ||||||| &5' GCAGG----CAA-GGGAATCCTCA 3'
Zc3h12ammu-miR-1982.1beg:293end:314pic:3' GACACCCTCTTGTATCCCACTCT 5'& ||||||| .|||.||| ||| &5' --GTGGGAG-GCATGGGG-GAG- 3'
Zc3h12ammu-miR-1982.2beg:760end:781pic:3' GACACCCTCTTGTATCCCACT 5'& ||| |.||||| &5' --GTGCCCTCTTCTGGGGTG- 3'
Zc3h12ammu-miR-1983beg:286end:301pic:3' TCTTTTGTACGAGGTCCACTC 5'& | ||.||||.| &5' ---------GGGCCGGGTGGG 3'
Zc3h12ammu-miR-2141beg:323end:341pic:3' TTGAAAAGACT----GTGGAGGA 5'& |||. |||||.| &5' -------CTGGACCCCACCTTC- 3'
Zc3h12ammu-miR-215beg:161end:179pic:3' CAGACAGTTTAGTATCCAGTA 5'& ||| || |||||| &5' ----GTCCCG-CACAGGTCA- 3'
Zc3h12ammu-miR-218-1starbeg:439end:459pic:3' CCACGAACTGCCTTGGTACAAA 5'& || || ||| || .|||||| &5' GG-GCATGA-GGCTTCATGTT- 3'
Zc3h12ammu-miR-22starbeg:69end:90pic:3' ATTTCGAACGGTGACTTCTTGA 5'& .||||| || ||||.|| &5' -GAAGCTGGACA--GAAGGAC- 3'
Zc3h12ammu-miR-26bstarbeg:298end:317pic:3' CTCGGTTCATTACCTCTTGTCC 5'& ||| || ||.||.||| &5' GAGGCATG----GGGGAGCAG- 3'
Zc3h12ammu-miR-2861beg:45end:66pic:3' GG-CGGGCGGCGGTCCGGGG 5'& || |||| |.||| ||||. &5' CCAGCCC-CTGCCTGGCCT- 3'
Zc3h12ammu-miR-2861beg:484end:505pic:3' GGCGGGC-GGCGGTCCGGGG 5'& || ||.| ||||. |.|| &5' CC-CCTGCCCGCTCTGTCC- 3'
Zc3h12ammu-miR-3099beg:42end:67pic:3' AGGGGTTGGAGAGAGATCGGAT 5'& ||||||.|| || ||.||||| &5' TCCCCAGCCCCTGCCTGGCCTA 3'
Zc3h12ammu-miR-3099starbeg:645end:670pic:3' GTTC--CCGACCTTCCT-TCGACC 5'& ||.| |||||||. || .||| &5' CAGGCAGGCTGGAGAGATGGCT-- 3'
Zc3h12ammu-miR-3099starbeg:58end:80pic:3' GTTCCCGACCTT--CCTTCGACC 5'& ||| ||||||||| &5' ----GGCCTACCCTGGAAGCTGG 3'
Zc3h12ammu-miR-322starbeg:439end:459pic:3' CACAACGT-CG-CGAAGTACAAA 5'& ||| | |||||||||| &5' -----GCATGAGGCTTCATGTT- 3'
Zc3h12ammu-miR-327beg:392end:413pic:3' TAGGAGTA--C-GGGGAGTTCA 5'& .||| | ||||||||| &5' --TCTCTGAGGCCCCCTCAAG- 3'
Zc3h12ammu-miR-327beg:471end:488pic:3' TAGGAGTACGGGGAGTTCA 5'& ||.|.| ||||||| &5' -TCTTTAAGCCCCTC---- 3'
Zc3h12ammu-miR-33beg:784end:803pic:3' ACGTTAC-GTTGATGTTACGTG 5'& | ||.|||||.||.|| &5' ------GACAGCTACAGTGTAC 3'
Zc3h12ammu-miR-337-3pbeg:58end:81pic:3' TCCGTAGTATATCC-TCGACTT 5'& ||| || |||||.| &5' -GGCCTACCCT-GGAAGCTGGA 3'
Zc3h12ammu-miR-34abeg:221end:235pic:3' TGTTGGTCGATTCTGTGACGGT 5'& .||||.||||| &5' ----------GAGACGCTGCC- 3'
Zc3h12ammu-miR-431beg:450end:471pic:3' ACGTACTGCCGGACGTTCTGT 5'& |||| |. ||||||. &5' --CATGTTAGTAAGCAAGAT- 3'
Zc3h12ammu-miR-431starbeg:397end:426pic:3' TCTTCGGGAC-GTTC-----TGCTGGAC 5'& ||.|||| |||| .||.||| &5' -GAGGCCCCCTCAAGCCAATGCGGCCT- 3'
Zc3h12ammu-miR-450a-3pbeg:98end:117pic:3' TACTTACGTTTCG-TAGGGGTTA 5'& ||||.| ||||.||| &5' ------GCAAGGGAATCCTCAA- 3'
Zc3h12ammu-miR-450a-3pbeg:34end:51pic:3' TACTTACGTTTCG-TAGGGGTTA 5'& | ||| .||||||. &5' ------GAT-AGCGGTCCCCAG- 3'
Zc3h12ammu-miR-450a-3pbeg:146end:161pic:3' TACTTACGTTTCGTAGGGGTTA 5'& || .||| |||||| &5' ------GC--GGCA-CCCCAA- 3'
Zc3h12ammu-miR-465a-5pbeg:588end:610pic:3' AGTGTAGTCACGGTA-AGATTTAT 5'& .||| || || | |.|||||| &5' -TACAG-AG-GCGAGATTTAAATA 3'
Zc3h12ammu-miR-465b-5pbeg:596end:619pic:3' GTCTAGTCGTGGTAAGATTTAT 5'& ||||. .|||.|||||. &5' -AGATTTAAA-TATTTTAAATG 3'
Zc3h12ammu-miR-465c-5pbeg:596end:619pic:3' GTCTAGTCGCGGTAAGATTTAT 5'& ||||. .|||.|||||. &5' -AGATTTAAA-TATTTTAAATG 3'
Zc3h12ammu-miR-466b-5pbeg:574end:599pic:3' GTACATG---TACATGTGTGTGTAG 5'& ||||||. .|||||| | .|. &5' CATGTATGCTGTGTACAGAGGCG-- 3'
Zc3h12ammu-miR-467abeg:785end:806pic:3' GCGTATATGTAC--GTC-CGTGAAT 5'& ||| ||| |.||||| &5' -------ACAGCTACAGTGTACTTA 3'
Zc3h12ammu-miR-467bbeg:788end:807pic:3' GTATATGTACGTC-CGTGAATG 5'& .| ||| |.|||||| &5' -----GCTA-CAGTGTACTTAC 3'
Zc3h12ammu-miR-470beg:522end:540pic:3' TGAGTGGTCACGGTCAGGTTCTT 5'& ||||| || ||||||. &5' ----ACCAGGGC---TCCAAGG- 3'
Zc3h12ammu-miR-497beg:719end:740pic:3' ATGTTTGGTG--TCACACGACGAC 5'& .| |||||| .||| ||| | &5' -GC-AACCACATGGTG-GCT-C-- 3'
Zc3h12ammu-miR-509-5pbeg:758end:780pic:3' TACTAACGGTGTAAGACCTCAT 5'& ||. |||| ||||||.||. &5' -TGG-TGCCCTCTTCTGGGGTG 3'
Zc3h12ammu-miR-511beg:284end:307pic:3' ACTCACGTCTCGTTTTCCGTA 5'& ||| || |.| ..|||||| &5' -GAGGGCCGGGTGGGAGGCAT 3'
Zc3h12ammu-miR-532-5pbeg:287end:308pic:3' TGCCAGGATGTGAGTTCCGTAC 5'& || || .||||||| &5' --GGGCCGGGTGG-GAGGCATG 3'
Zc3h12ammu-miR-532-5pbeg:428end:447pic:3' TGCCAGGATGTGAGTTCCGTAC 5'& |||. | ||.|||||| &5' -----CCTGTTCACAGGGCATG 3'
Zc3h12ammu-miR-542-3pbeg:199end:219pic:3' AAAGTCA-ATAGTTAGACAGTGT 5'& || |||| |||||||. &5' ---CATTGTATC--TCTGTCAT- 3'
Zc3h12ammu-miR-615-5pbeg:315end:335pic:3' CTAGGCTCGTGGCCCCTGGGGG 5'& | |.|||| ||||||| &5' GGCCTGAGCT----GGACCCC- 3'
Zc3h12ammu-miR-666-5pbeg:372end:396pic:3' CCGAGA-GTGTCGACACGGGCGA 5'& |.| ||| ||||||.||| &5' -GTTAGGCACCA-TGTGCCTGCT 3'
Zc3h12ammu-miR-666-5pbeg:478end:499pic:3' CCGA-GAGTGTCGACACGGGCGA 5'& || ||| | |||||||| &5' -GCCCCTC-CCC---TGCCCGCT 3'
Zc3h12ammu-miR-673-3pbeg:53end:74pic:3' CCACGTGTCTTGAGTCGGGGCCT 5'& ||| | | || |||.||| &5' --TGC-CTGGCCTA--CCCTGGA 3'
Zc3h12ammu-miR-681beg:636end:659pic:3' TCGACGGACGGTCGC-TCCGAC 5'& .||| .|||||| | |||||| &5' GGCTA-TTGCCAG-GCAGGCTG 3'
Zc3h12ammu-miR-686beg:447end:468pic:3' AGAAGTGGCAGACCCTTCGTTA 5'& ||||| .||. | |||||| &5' -CTTCA-TGTTA-GTAAGCAA- 3'
Zc3h12ammu-miR-693-3pbeg:58end:79pic:3' AATGTCGGTGTAGACTTTCGACG 5'& .||| |||.|||||| &5' ----GGCCTACCCTGGAAGCTG- 3'
Zc3h12ammu-miR-705beg:322end:345pic:3' ACGGGT-GGGGTGGAGGGTGG 5'& ||. . ||||||||.||||| &5' -GCTGGACCCCACCTTCCACC 3'
Zc3h12ammu-miR-705beg:543end:563pic:3' ACGGGTGGGGTGGAGGGTGG 5'& |... || |||||||||. &5' -GTTT-CCACACCTCCCAT- 3'
Zc3h12ammu-miR-713beg:788end:802pic:3' CGACACACGGAAGTCACGT 5'& ||. |||||.| &5' -------GCTA-CAGTGTA 3'
Zc3h12ammu-miR-758beg:728end:745pic:3' ATCACCTGGTCCAGTGTTT 5'& |.|||| | ||||||| &5' TGGTGG-C----TCACAAA 3'
Zc3h12ammu-miR-764-5pbeg:79end:100pic:3' TCCTCCTGTACAC-TCGTGG 5'& || |||||| ||| |||| &5' AGAAGGACAAGTGAAGCA-- 3'
Zc3h12ammu-miR-767beg:776end:802pic:3' AC-GAG-TCTGTTGGTACCACGT 5'& || || |||||.|.| |||.| &5' TGTCTGAAGACAGCTACAGTGTA 3'
Zc3h12ammu-miR-770-3pbeg:45end:68pic:3' GGTCGAGGTGCAGTCCGGGTGC 5'& ||||| || .| | ||||.|| &5' CCAGC-CCCTGCCTGGCCTAC- 3'
Zc3h12ammu-miR-770-3pbeg:723end:742pic:3' GGTCGAGGTGCAGT-CCGGGTGC 5'& |||| |||.||| &5' ------CCACATGGTGGCTCAC- 3'
Zc3h12ammu-miR-873beg:729end:752pic:3' TCCTCTGAGTGTTCAAGGACG 5'& || |.||||||| .|||. &5' -GGTGGCTCACAAACATCTGT 3'
Zc3h12ammu-miR-874beg:425end:445pic:3' AGCCAGGGAGCCCGGTCCCGTC 5'& ||||| ||||||| &5' ----TCCCTGTTCACAGGGCA- 3'
Zc3h12ammu-miR-875-5pbeg:762end:782pic:3' GTGGACTATTTTGACTCCATAT 5'& .|| |||.|||.| &5' -GCCCTCTT---CTGGGGTGT- 3'
Zc3h12ammu-miR-876-5pbeg:828end:844pic:3' ATCACTAAGTGTCTCTTTAGGT 5'& | ||||||||..| &5' ---------AGAGAGAAATTTA 3'
Zc3h12ammu-miR-877beg:756end:776pic:3' GGGA-CGCGGTAGAGGAGATG 5'& .|| |.||| |||.|||. &5' -TCTGGTGCC--CTCTTCTG- 3'
Zc3h12ammu-miR-877starbeg:560end:576pic:3' ACCCTCCTCCCTCTTCTCCTGT 5'& ||| ..||||||| &5' --------GGGT-GGGAGGACA 3'
DNA & RNA Element - RAID2
Gene NameRAID IDInteractor 1Category 1ID 1Interactor 2Category 2ID 2MethodsScore
Zc3h12aRAID00088829mmu-miR-297b-5pmiRNAMIMAT0003480Zc3h12amRNA230738CLIP-seq//Prediction0.6308
Zc3h12aRAID00148360mmu-miR-6951-3pmiRNAMIMAT0027803Zc3h12amRNA230738Prediction0.1828
Zc3h12aRAID00228094mmu-miR-3058-5pmiRNAMIMAT0014813Zc3h12amRNA230738Prediction0.1828
Zc3h12aRAID00228978mmu-miR-6964-5pmiRNAMIMAT0027828Zc3h12amRNA230738Prediction0.1828
Zc3h12aRAID00283527mmu-miR-296-3pmiRNAMIMAT0004576Zc3h12amRNA230738Prediction0.1828
Zc3h12aRAID00554428mmu-miR-7051-3pmiRNAMIMAT0028007Zc3h12amRNA230738Prediction0.1828
Zc3h12aRAID00603960mmu-miR-194-5pmiRNAMIMAT0000224Zc3h12amRNA230738Prediction0.1828
Zc3h12aRAID00709976mmu-miR-297c-5pmiRNAMIMAT0004865Zc3h12amRNA230738CLIP-seq//Prediction0.6308
Zc3h12aRAID00798538mmu-miR-3097-3pmiRNAMIMAT0014916Zc3h12amRNA230738CLIP-seq0.5483
Zc3h12aRAID00931231mmu-miR-6955-5pmiRNAMIMAT0027810Zc3h12amRNA230738Prediction0.1828
Zc3h12aRAID00942659mmu-miR-497a-5pmiRNAMIMAT0003453Zc3h12amRNA230738Prediction0.1828
Zc3h12aRAID00964026mmu-miR-27a-5pmiRNAMIMAT0004633Zc3h12amRNA230738Western Blot//Reporter Assay//RT-PCR0.9526
Zc3h12aRAID01051463mmu-miR-125a-5pmiRNAMIMAT0000135Zc3h12amRNA230738Prediction0.1828
Zc3h12aRAID01086677mmu-miR-7073-3pmiRNAMIMAT0028053Zc3h12amRNA230738Prediction0.1828
Zc3h12aRAID01100950mmu-miR-1933-3pmiRNAMIMAT0009397Zc3h12amRNA230738CLIP-seq0.5483
Zc3h12aRAID01205303mmu-miR-15b-5pmiRNAMIMAT0000124Zc3h12amRNA230738Prediction0.1828
Zc3h12aRAID01473312mmu-miR-7116-3pmiRNAMIMAT0028130Zc3h12amRNA230738Prediction0.1828
Zc3h12aRAID01607857mmu-miR-1966-3pmiRNAMIMAT0022952Zc3h12amRNA230738Prediction0.1828
Zc3h12aRAID01681129mmu-miR-351-5pmiRNAMIMAT0000609Zc3h12amRNA230738Prediction0.1828
Zc3h12aRAID01707486mmu-miR-675-3pmiRNAMIMAT0003726Zc3h12amRNA230738CLIP-seq0.5483
Zc3h12aRAID01726280mmu-miR-6715-5pmiRNAMIMAT0029876Zc3h12amRNA230738Prediction0.1828
Zc3h12aRAID01726631mmu-miR-6365miRNAMIMAT0025109Zc3h12amRNA230738Prediction0.1828
Zc3h12aRAID01834741mmu-miR-122-5pmiRNAMIMAT0000246Zc3h12amRNA230738Prediction0.1828
Zc3h12aRAID01893559mmu-miR-6356miRNAMIMAT0025099Zc3h12amRNA230738Prediction0.1828
Zc3h12aRAID01999566mmu-miR-126a-5pmiRNAMIMAT0000137Zc3h12amRNA230738CLIP-seq0.5483
Zc3h12aRAID02019122mmu-miR-5119miRNAMIMAT0020627Zc3h12amRNA230738CLIP-seq0.5483
Zc3h12aRAID02233165mmu-miR-421-3pmiRNAMIMAT0004869Zc3h12amRNA230738Prediction0.2381
Zc3h12aRAID02314610mmu-miR-6400miRNAMIMAT0025152Zc3h12amRNA230738Prediction0.1828
Zc3h12aRAID02333513mmu-miR-182-5pmiRNAMIMAT0000211Zc3h12amRNA230738Prediction0.1828
Zc3h12aRAID02368020mmu-miR-434-3pmiRNAMIMAT0001422Zc3h12amRNA230738CLIP-seq0.5483
Zc3h12aRAID02393700mmu-miR-717miRNAMIMAT0003510Zc3h12amRNA230738CLIP-seq0.5483
Zc3h12aRAID02510566mmu-miR-505-3pmiRNAMIMAT0003513Zc3h12amRNA230738Prediction0.1828
Zc3h12aRAID02547688mmu-miR-125b-5pmiRNAMIMAT0000136Zc3h12amRNA230738Prediction0.1828
Zc3h12aRAID02612783mmu-miR-9-5pmiRNAMIMAT0000142Zc3h12amRNA230738Prediction0.2381
Zc3h12aRAID02626233mmu-miR-874-3pmiRNAMIMAT0004853Zc3h12amRNA230738Prediction0.1828
Zc3h12aRAID03096794mmu-miR-7006-3pmiRNAMIMAT0027917Zc3h12amRNA230738Prediction0.1828
Zc3h12aRAID03105279mmu-miR-297a-5pmiRNAMIMAT0000375Zc3h12amRNA230738CLIP-seq//Prediction0.6308
Zc3h12aRAID03150575mmu-miR-6896-3pmiRNAMIMAT0027693Zc3h12amRNA230738Prediction0.1828
Zc3h12aRAID03249591mmu-miR-6956-3pmiRNAMIMAT0027813Zc3h12amRNA230738Prediction0.1828
Zc3h12aRAID03492711mmu-miR-15a-5pmiRNAMIMAT0000526Zc3h12amRNA230738Prediction0.1828
Zc3h12aRAID03591831mmu-miR-7037-3pmiRNAMIMAT0027979Zc3h12amRNA230738Prediction0.1828
Zc3h12aRAID03771244mmu-miR-31-5pmiRNAMIMAT0000538Zc3h12amRNA230738Prediction0.1828
Zc3h12aRAID03958833mmu-miR-224-5pmiRNAMIMAT0000671Zc3h12amRNA230738Prediction0.1828
Zc3h12aRAID04046519mmu-miR-6914-3pmiRNAMIMAT0027729Zc3h12amRNA230738Prediction0.1828
Zc3h12aRAID04631299Il2mRNA16183Zc3h12aprotein230738RIP (RNA Immunoprecipitation)//Reporter Assay//RT-PCR//Western Blot0.9820