DNA & RNA Element - RepTar |
Gene Name | miRNA | Begin | End | Profile |
Zc3h12a | mmu-miR-297a | beg:794 | end:812 | pic:3' TGTACGTGTACGTGTGTATGTA 5'& .||.|| .||||||| &5' --GTGTACT----TACATACA- 3' |
Zc3h12a | mmu-miR-297b-5p | beg:794 | end:812 | pic:3' TGTACAAGTACGTG--TGTATGTA 5'& .||.|| ||||||| &5' --------GTGTACTTACATACA- 3' |
Zc3h12a | mmu-miR-297c | beg:794 | end:812 | pic:3' TGTACATGTACGTGTGTATGTA 5'& .||||| .||||||| &5' --GTGTACT----TACATACA- 3' |
Zc3h12a | mmu-miR-9 | beg:113 | end:125 | pic:3' AGTATGTCGATCTATTGGTTTCT 5'& ||||||||| &5' --------------AACCAAAGA 3' |
Zc3h12a | mmu-miR-2141 | beg:544 | end:560 | pic:3' TTGAAAAGACTGTGGAGGA 5'& |||| |||||||| &5' ----TTTCC-ACACCTCC- 3' |
Zc3h12a | mghv-miR-M1-7-5p | beg:322 | end:340 | pic:3' TCCAATGGCGTGGAGGTGGAAA 5'& .|.| ||| ||||||| &5' -----GCTGGACC-CCACCTT- 3' |
Zc3h12a | mmu-miR-762 | beg:39 | end:56 | pic:3' CGAGACAGGGCC-GGGGTCGGGG 5'& ||| |||||||||| &5' ---------CGGTCCCCAGCCCC 3' |
Zc3h12a | mmu-miR-92astar | beg:319 | end:339 | pic:3' CATTACGGTGGTTAGGGGTGGA 5'& || .| . |||||||| &5' ----TGA-GCTGGACCCCACCT 3' |
Zc3h12a | mmu-miR-1982star | beg:544 | end:562 | pic:3' GGAGGGGTCCTGGGAGGGTT 5'& | ||| ||||||| &5' --TTTCCACA--CCTCCCA- 3' |
Zc3h12a | mmu-miR-674 | beg:665 | end:675 | pic:3' ATGTGGTGAGGGTAGAGTCACG 5'& ||||||| &5' --------------CTCAGTG- 3' |
Zc3h12a | mmu-miR-342-5p | beg:145 | end:159 | pic:3' GAGTTAGTGTCTATCGTGGGGA 5'& |.| .||||||| &5' ------CGC----GGCACCCC- 3' |
Zc3h12a | mmu-miR-744 | beg:132 | end:149 | pic:3' ACGACAATCGGGATCGGGGCGT 5'& ||.|..||.||||||| &5' -----TTGGTTCTGGCCCCGC- 3' |
Zc3h12a | mmu-miR-423-5p | beg:469 | end:488 | pic:3' TTTCAGAGCG-AGAGA--CGGGGAGT 5'& || |||.| ||||||| &5' --------GCTTCTTTAAGCCCCTC- 3' |
Zc3h12a | mmu-miR-293 | beg:138 | end:156 | pic:3' TGTGATGTTTGAGACGCCGTGA 5'& | .| | ||||||| &5' ------CTGGCCCCGCGGCAC- 3' |
Zc3h12a | mmu-miR-3472 | beg:636 | end:647 | pic:3' CCAAGGAAGGTCGAAGACCGATAAT 5'& |||||||. &5' -----------------GGCTATTG 3' |
Zc3h12a | mmu-miR-1933-3p | beg:690 | end:709 | pic:3' TATCAGTGTGACTACCAGGACC 5'& || |||| ||||||| &5' ----TCTT-CTGAAGGTCCTG- 3' |
Zc3h12a | mcmv-miR-m108-1 | beg:164 | end:182 | pic:3' GCTGTGCTCGGTGG---CAGTCTTT 5'& ||.| |||||||. &5' ---------CCGCACAGGTCAGAAG 3' |
Zc3h12a | mmu-miR-532-3p | beg:284 | end:304 | pic:3' ACGTTCGGAACCCACACCCTCC 5'& | .||| || |||||||| &5' -GAGGGCC---GG-GTGGGAGG 3' |
Zc3h12a | mcmv-miR-M23-2 | beg:34 | end:51 | pic:3' GGCGAACTGGCTCCGGGGGTA 5'& ||. | ||.||||| &5' ------GATAGCGGTCCCCA- 3' |
Zc3h12a | mmu-miR-1188 | beg:136 | end:160 | pic:3' AGGACCGGGTTGGAGTGTGGT 5'& |.||||||| .| ||| ||| &5' TTCTGGCCCCGCGGCACCCCA 3' |
Zc3h12a | mmu-miR-1199 | beg:652 | end:673 | pic:3' GGCGCGCTGGCC------CTGAGTCT 5'& |.|.|| |.||||| &5' ------GGCTGGAGAGATGGCTCAG- 3' |
Zc3h12a | mmu-miR-127star | beg:436 | end:455 | pic:3' TAGTCTCGGGAGACT-CGAAGTC 5'& |||.|| ||| |||||| &5' --CAGGGCA---TGAGGCTTCA- 3' |
Zc3h12a | mmu-miR-145 | beg:313 | end:332 | pic:3' TCCCTAAGGACCCTTTTGACCTG 5'& || |||| |.|||||| &5' ---GAGGCCTG----AGCTGGAC 3' |
Zc3h12a | mmu-miR-145 | beg:58 | end:82 | pic:3' TCCCTAA-GGACCCTTTTGACCTG 5'& || ||||| ||.|||||| &5' -GGCCTACCCTGG--AAGCTGGAC 3' |
Zc3h12a | mmu-miR-150 | beg:580 | end:602 | pic:3' GTGAC-CATGTTCCCAACCCTCT 5'& .||| |||||. || |||| &5' -GCTGTGTACAGAGGC---GAGA 3' |
Zc3h12a | mmu-miR-150 | beg:292 | end:313 | pic:3' GTGACCATGTTCCCAACCCTCT 5'& |||. .||| ||||.|| &5' ----GGTGGGAGGCATGGGGGA 3' |
Zc3h12a | mmu-miR-184 | beg:485 | end:506 | pic:3' TGGGAATAGTCAAGAGGCAGGT 5'& |||| |||.||||| &5' -CCCTGCCCG---CTCTGTCCA 3' |
Zc3h12a | mmu-miR-1904 | beg:304 | end:318 | pic:3' GGAGGGAGGTCTCCTCGTCTTG 5'& .|.||||||||. &5' ---------GGGGGAGCAGAG- 3' |
Zc3h12a | mmu-miR-1937c | beg:759 | end:780 | pic:3' ACC-CCCGAGAAGGCCCTA 5'& || | ||||||.|||.| &5' -GGTGCCCTCTTCTGGGGT 3' |
Zc3h12a | mmu-miR-1937c | beg:348 | end:357 | pic:3' ACCCCCGAGAAGGCCCTA 5'& |.|||| &5' -----------CTGGGA- 3' |
Zc3h12a | mmu-miR-193star | beg:528 | end:543 | pic:3' AGTAGAACGGGCGTTTCTGGGT 5'& ||.| | |||.||| &5' -------GCTC-C-AAGGCCC- 3' |
Zc3h12a | mmu-miR-1940 | beg:536 | end:553 | pic:3' TTGACGAGGTGGAAGAGTCAGGAGGTA 5'& .|| ||| ..|||| &5' ---------GCC--CTCTG-TTTCCA- 3' |
Zc3h12a | mmu-miR-1944 | beg:17 | end:39 | pic:3' TTAGTCTTGAACTGTAAGTCGTGTCTC 5'& .|..| || |. || |||||| &5' ----GGGGC-TGTCGGGCATCACAGA- 3' |
Zc3h12a | mmu-miR-1946a | beg:37 | end:64 | pic:3' TTTTCACACACGG--TGGTGACGGGCCGA 5'& || | || || .|| |||||.||| &5' ---AGCG-GTCCCCAGCCCCTGCCTGGC- 3' |
Zc3h12a | mmu-miR-1946b | beg:41 | end:64 | pic:3' TTTTCGTACACGG--TGGTGACGGGCCG 5'& || || .|| |||||.||| &5' --------GTCCCCAGCCCCTGCCTGGC 3' |
Zc3h12a | mmu-miR-1948 | beg:48 | end:63 | pic:3' GACATGCTCACGA-GACGGATTT 5'& || ||||||.. &5' ----------GCCCCTGCCTGG- 3' |
Zc3h12a | mmu-miR-1967 | beg:94 | end:116 | pic:3' CGTAGAAGAGGGGTCC-TAGGAGT 5'& ||| | .|| ||||||| &5' GCAGG----CAA-GGGAATCCTCA 3' |
Zc3h12a | mmu-miR-1982.1 | beg:293 | end:314 | pic:3' GACACCCTCTTGTATCCCACTCT 5'& ||||||| .|||.||| ||| &5' --GTGGGAG-GCATGGGG-GAG- 3' |
Zc3h12a | mmu-miR-1982.2 | beg:760 | end:781 | pic:3' GACACCCTCTTGTATCCCACT 5'& ||| |.||||| &5' --GTGCCCTCTTCTGGGGTG- 3' |
Zc3h12a | mmu-miR-1983 | beg:286 | end:301 | pic:3' TCTTTTGTACGAGGTCCACTC 5'& | ||.||||.| &5' ---------GGGCCGGGTGGG 3' |
Zc3h12a | mmu-miR-2141 | beg:323 | end:341 | pic:3' TTGAAAAGACT----GTGGAGGA 5'& |||. |||||.| &5' -------CTGGACCCCACCTTC- 3' |
Zc3h12a | mmu-miR-215 | beg:161 | end:179 | pic:3' CAGACAGTTTAGTATCCAGTA 5'& ||| || |||||| &5' ----GTCCCG-CACAGGTCA- 3' |
Zc3h12a | mmu-miR-218-1star | beg:439 | end:459 | pic:3' CCACGAACTGCCTTGGTACAAA 5'& || || ||| || .|||||| &5' GG-GCATGA-GGCTTCATGTT- 3' |
Zc3h12a | mmu-miR-22star | beg:69 | end:90 | pic:3' ATTTCGAACGGTGACTTCTTGA 5'& .||||| || ||||.|| &5' -GAAGCTGGACA--GAAGGAC- 3' |
Zc3h12a | mmu-miR-26bstar | beg:298 | end:317 | pic:3' CTCGGTTCATTACCTCTTGTCC 5'& ||| || ||.||.||| &5' GAGGCATG----GGGGAGCAG- 3' |
Zc3h12a | mmu-miR-2861 | beg:45 | end:66 | pic:3' GG-CGGGCGGCGGTCCGGGG 5'& || |||| |.||| ||||. &5' CCAGCCC-CTGCCTGGCCT- 3' |
Zc3h12a | mmu-miR-2861 | beg:484 | end:505 | pic:3' GGCGGGC-GGCGGTCCGGGG 5'& || ||.| ||||. |.|| &5' CC-CCTGCCCGCTCTGTCC- 3' |
Zc3h12a | mmu-miR-3099 | beg:42 | end:67 | pic:3' AGGGGTTGGAGAGAGATCGGAT 5'& ||||||.|| || ||.||||| &5' TCCCCAGCCCCTGCCTGGCCTA 3' |
Zc3h12a | mmu-miR-3099star | beg:645 | end:670 | pic:3' GTTC--CCGACCTTCCT-TCGACC 5'& ||.| |||||||. || .||| &5' CAGGCAGGCTGGAGAGATGGCT-- 3' |
Zc3h12a | mmu-miR-3099star | beg:58 | end:80 | pic:3' GTTCCCGACCTT--CCTTCGACC 5'& ||| ||||||||| &5' ----GGCCTACCCTGGAAGCTGG 3' |
Zc3h12a | mmu-miR-322star | beg:439 | end:459 | pic:3' CACAACGT-CG-CGAAGTACAAA 5'& ||| | |||||||||| &5' -----GCATGAGGCTTCATGTT- 3' |
Zc3h12a | mmu-miR-327 | beg:392 | end:413 | pic:3' TAGGAGTA--C-GGGGAGTTCA 5'& .||| | ||||||||| &5' --TCTCTGAGGCCCCCTCAAG- 3' |
Zc3h12a | mmu-miR-327 | beg:471 | end:488 | pic:3' TAGGAGTACGGGGAGTTCA 5'& ||.|.| ||||||| &5' -TCTTTAAGCCCCTC---- 3' |
Zc3h12a | mmu-miR-33 | beg:784 | end:803 | pic:3' ACGTTAC-GTTGATGTTACGTG 5'& | ||.|||||.||.|| &5' ------GACAGCTACAGTGTAC 3' |
Zc3h12a | mmu-miR-337-3p | beg:58 | end:81 | pic:3' TCCGTAGTATATCC-TCGACTT 5'& ||| || |||||.| &5' -GGCCTACCCT-GGAAGCTGGA 3' |
Zc3h12a | mmu-miR-34a | beg:221 | end:235 | pic:3' TGTTGGTCGATTCTGTGACGGT 5'& .||||.||||| &5' ----------GAGACGCTGCC- 3' |
Zc3h12a | mmu-miR-431 | beg:450 | end:471 | pic:3' ACGTACTGCCGGACGTTCTGT 5'& |||| |. ||||||. &5' --CATGTTAGTAAGCAAGAT- 3' |
Zc3h12a | mmu-miR-431star | beg:397 | end:426 | pic:3' TCTTCGGGAC-GTTC-----TGCTGGAC 5'& ||.|||| |||| .||.||| &5' -GAGGCCCCCTCAAGCCAATGCGGCCT- 3' |
Zc3h12a | mmu-miR-450a-3p | beg:98 | end:117 | pic:3' TACTTACGTTTCG-TAGGGGTTA 5'& ||||.| ||||.||| &5' ------GCAAGGGAATCCTCAA- 3' |
Zc3h12a | mmu-miR-450a-3p | beg:34 | end:51 | pic:3' TACTTACGTTTCG-TAGGGGTTA 5'& | ||| .||||||. &5' ------GAT-AGCGGTCCCCAG- 3' |
Zc3h12a | mmu-miR-450a-3p | beg:146 | end:161 | pic:3' TACTTACGTTTCGTAGGGGTTA 5'& || .||| |||||| &5' ------GC--GGCA-CCCCAA- 3' |
Zc3h12a | mmu-miR-465a-5p | beg:588 | end:610 | pic:3' AGTGTAGTCACGGTA-AGATTTAT 5'& .||| || || | |.|||||| &5' -TACAG-AG-GCGAGATTTAAATA 3' |
Zc3h12a | mmu-miR-465b-5p | beg:596 | end:619 | pic:3' GTCTAGTCGTGGTAAGATTTAT 5'& ||||. .|||.|||||. &5' -AGATTTAAA-TATTTTAAATG 3' |
Zc3h12a | mmu-miR-465c-5p | beg:596 | end:619 | pic:3' GTCTAGTCGCGGTAAGATTTAT 5'& ||||. .|||.|||||. &5' -AGATTTAAA-TATTTTAAATG 3' |
Zc3h12a | mmu-miR-466b-5p | beg:574 | end:599 | pic:3' GTACATG---TACATGTGTGTGTAG 5'& ||||||. .|||||| | .|. &5' CATGTATGCTGTGTACAGAGGCG-- 3' |
Zc3h12a | mmu-miR-467a | beg:785 | end:806 | pic:3' GCGTATATGTAC--GTC-CGTGAAT 5'& ||| ||| |.||||| &5' -------ACAGCTACAGTGTACTTA 3' |
Zc3h12a | mmu-miR-467b | beg:788 | end:807 | pic:3' GTATATGTACGTC-CGTGAATG 5'& .| ||| |.|||||| &5' -----GCTA-CAGTGTACTTAC 3' |
Zc3h12a | mmu-miR-470 | beg:522 | end:540 | pic:3' TGAGTGGTCACGGTCAGGTTCTT 5'& ||||| || ||||||. &5' ----ACCAGGGC---TCCAAGG- 3' |
Zc3h12a | mmu-miR-497 | beg:719 | end:740 | pic:3' ATGTTTGGTG--TCACACGACGAC 5'& .| |||||| .||| ||| | &5' -GC-AACCACATGGTG-GCT-C-- 3' |
Zc3h12a | mmu-miR-509-5p | beg:758 | end:780 | pic:3' TACTAACGGTGTAAGACCTCAT 5'& ||. |||| ||||||.||. &5' -TGG-TGCCCTCTTCTGGGGTG 3' |
Zc3h12a | mmu-miR-511 | beg:284 | end:307 | pic:3' ACTCACGTCTCGTTTTCCGTA 5'& ||| || |.| ..|||||| &5' -GAGGGCCGGGTGGGAGGCAT 3' |
Zc3h12a | mmu-miR-532-5p | beg:287 | end:308 | pic:3' TGCCAGGATGTGAGTTCCGTAC 5'& || || .||||||| &5' --GGGCCGGGTGG-GAGGCATG 3' |
Zc3h12a | mmu-miR-532-5p | beg:428 | end:447 | pic:3' TGCCAGGATGTGAGTTCCGTAC 5'& |||. | ||.|||||| &5' -----CCTGTTCACAGGGCATG 3' |
Zc3h12a | mmu-miR-542-3p | beg:199 | end:219 | pic:3' AAAGTCA-ATAGTTAGACAGTGT 5'& || |||| |||||||. &5' ---CATTGTATC--TCTGTCAT- 3' |
Zc3h12a | mmu-miR-615-5p | beg:315 | end:335 | pic:3' CTAGGCTCGTGGCCCCTGGGGG 5'& | |.|||| ||||||| &5' GGCCTGAGCT----GGACCCC- 3' |
Zc3h12a | mmu-miR-666-5p | beg:372 | end:396 | pic:3' CCGAGA-GTGTCGACACGGGCGA 5'& |.| ||| ||||||.||| &5' -GTTAGGCACCA-TGTGCCTGCT 3' |
Zc3h12a | mmu-miR-666-5p | beg:478 | end:499 | pic:3' CCGA-GAGTGTCGACACGGGCGA 5'& || ||| | |||||||| &5' -GCCCCTC-CCC---TGCCCGCT 3' |
Zc3h12a | mmu-miR-673-3p | beg:53 | end:74 | pic:3' CCACGTGTCTTGAGTCGGGGCCT 5'& ||| | | || |||.||| &5' --TGC-CTGGCCTA--CCCTGGA 3' |
Zc3h12a | mmu-miR-681 | beg:636 | end:659 | pic:3' TCGACGGACGGTCGC-TCCGAC 5'& .||| .|||||| | |||||| &5' GGCTA-TTGCCAG-GCAGGCTG 3' |
Zc3h12a | mmu-miR-686 | beg:447 | end:468 | pic:3' AGAAGTGGCAGACCCTTCGTTA 5'& ||||| .||. | |||||| &5' -CTTCA-TGTTA-GTAAGCAA- 3' |
Zc3h12a | mmu-miR-693-3p | beg:58 | end:79 | pic:3' AATGTCGGTGTAGACTTTCGACG 5'& .||| |||.|||||| &5' ----GGCCTACCCTGGAAGCTG- 3' |
Zc3h12a | mmu-miR-705 | beg:322 | end:345 | pic:3' ACGGGT-GGGGTGGAGGGTGG 5'& ||. . ||||||||.||||| &5' -GCTGGACCCCACCTTCCACC 3' |
Zc3h12a | mmu-miR-705 | beg:543 | end:563 | pic:3' ACGGGTGGGGTGGAGGGTGG 5'& |... || |||||||||. &5' -GTTT-CCACACCTCCCAT- 3' |
Zc3h12a | mmu-miR-713 | beg:788 | end:802 | pic:3' CGACACACGGAAGTCACGT 5'& ||. |||||.| &5' -------GCTA-CAGTGTA 3' |
Zc3h12a | mmu-miR-758 | beg:728 | end:745 | pic:3' ATCACCTGGTCCAGTGTTT 5'& |.|||| | ||||||| &5' TGGTGG-C----TCACAAA 3' |
Zc3h12a | mmu-miR-764-5p | beg:79 | end:100 | pic:3' TCCTCCTGTACAC-TCGTGG 5'& || |||||| ||| |||| &5' AGAAGGACAAGTGAAGCA-- 3' |
Zc3h12a | mmu-miR-767 | beg:776 | end:802 | pic:3' AC-GAG-TCTGTTGGTACCACGT 5'& || || |||||.|.| |||.| &5' TGTCTGAAGACAGCTACAGTGTA 3' |
Zc3h12a | mmu-miR-770-3p | beg:45 | end:68 | pic:3' GGTCGAGGTGCAGTCCGGGTGC 5'& ||||| || .| | ||||.|| &5' CCAGC-CCCTGCCTGGCCTAC- 3' |
Zc3h12a | mmu-miR-770-3p | beg:723 | end:742 | pic:3' GGTCGAGGTGCAGT-CCGGGTGC 5'& |||| |||.||| &5' ------CCACATGGTGGCTCAC- 3' |
Zc3h12a | mmu-miR-873 | beg:729 | end:752 | pic:3' TCCTCTGAGTGTTCAAGGACG 5'& || |.||||||| .|||. &5' -GGTGGCTCACAAACATCTGT 3' |
Zc3h12a | mmu-miR-874 | beg:425 | end:445 | pic:3' AGCCAGGGAGCCCGGTCCCGTC 5'& ||||| ||||||| &5' ----TCCCTGTTCACAGGGCA- 3' |
Zc3h12a | mmu-miR-875-5p | beg:762 | end:782 | pic:3' GTGGACTATTTTGACTCCATAT 5'& .|| |||.|||.| &5' -GCCCTCTT---CTGGGGTGT- 3' |
Zc3h12a | mmu-miR-876-5p | beg:828 | end:844 | pic:3' ATCACTAAGTGTCTCTTTAGGT 5'& | ||||||||..| &5' ---------AGAGAGAAATTTA 3' |
Zc3h12a | mmu-miR-877 | beg:756 | end:776 | pic:3' GGGA-CGCGGTAGAGGAGATG 5'& .|| |.||| |||.|||. &5' -TCTGGTGCC--CTCTTCTG- 3' |
Zc3h12a | mmu-miR-877star | beg:560 | end:576 | pic:3' ACCCTCCTCCCTCTTCTCCTGT 5'& ||| ..||||||| &5' --------GGGT-GGGAGGACA 3' |