Klhl6
DNA & RNA Element - AREsite
Gene NameMotifCDS AreaARE AreaEvidence
Klhl6ATTTA61-18932115-2119
DNA & RNA Element - microRNA
Mirbase AccmiRNA NameGene IDGene SymbolmiRNA AlignmentAlignmentGene AlignmentmiRNA StartmiRNA EndGene StartGene EndGenome CoordinatesConservationAlign ScoreSeed CatEnergymirSVR Score
MIMAT0004527mmu-miR-124*239743Klhl6uagUUCCAGGCGACACUUG-UGc || | ::| ||||||| || aggAAUGCUUG-UGUGAACUACc220135156[mm9:16:19946929-19946950:-]0.66241210-15.36-0.7668
MIMAT0004534mmu-miR-145*239743Klhl6guUCUUGUCAUAAAGGUCCUUa ||| ||| ||||||| ugAGACCAG-----CCAGGAAu221124140[mm9:16:19946945-19946961:-]0.66241427-17.32-0.4120
MIMAT0004539mmu-miR-183*239743Klhl6aauaccGGGAAGCC--AUUAAGUg || | | | ||||||| cucccaCCAUACUGCCUAAUUCAg217381404[mm9:16:19946681-19946704:-]0.57341437-8.08-0.2125
MIMAT0004579mmu-miR-302a*239743Klhl6cgUUCAUGUUGGUGCAAAUUca | | | ::: |:|||||| ggAUGAAGGGUAAUGUUUAAca321160181[mm9:16:19946904-19946925:-]0.62971320-6.35-0.1231
MIMAT0004616mmu-miR-30c-1*239743Klhl6ccUCAUUUGUUGGGAGAGGGUc ||| |::: : ||||||| ccAGUCAGUG--UGUCUCCCAc221368387[mm9:16:19946698-19946717:-]0.57341457-14.02-0.2925
MIMAT0005438mmu-miR-30c-2*239743Klhl6ucucaUUUGUCGGA-AGAGGGUc |: |||: | ||||||| acgccAGUCAGUGUGUCUCCCAc218365387[mm9:16:19946698-19946720:-]0.57341527-16.31-0.2900
MIMAT0004617mmu-miR-148a*239743Klhl6ucagccUCACAGAGUCU-UGAAa | ||| |||| |||| augccuACUGUGCCAGACACUUa217190212[mm9:16:19946873-19946895:-]0.59691200-8.83-0.8885
MIMAT0004624mmu-miR-15a*239743Klhl6acuccgUCGUGUCA-UACCGGAc | :|::|| ||||||| uacuuaACUAUGGUAAUGGCCUg217225247[mm9:16:19946838-19946860:-]0.59691517-18.26-0.5864
MIMAT0004631mmu-miR-29a*239743Klhl6gacuUGUGGUUUUCUUUA-GUCa | :|||||| |||| ||| agcuAAGCCAAAAUAAAUCCAGg219335357[mm9:16:19946728-19946750:-]0.58521340-12.74-0.7273
MIMAT0000551mmu-miR-323-3p239743Klhl6ucUCCAGCUGGCACAUUACAc ||| :|| | ||||||| ucAGGAUGA-AGGGUAAUGUu220157176[mm9:16:19946909-19946928:-]0.62971537-14.13-0.5634
MIMAT0003462mmu-miR-684239743Klhl6aacugaaCUUCCCUUUUGa ||: ||||||| uaauucaGAGAGGAAAACa213397415[mm9:16:19946670-19946688:-]0.57341487-11.40-0.9951
MIMAT0003464mmu-miR-686239743Klhl6agAAGUGGC----AGA-CCCUUCGUUa |||| :| ||| |||||||| uuUUCAGUGGGUCUCUCAGGAAGCAAg221307333[mm9:16:19946752-19946778:-]0.59691507-18.73-0.3690
MIMAT0003470mmu-miR-691239743Klhl6aaAAG--ACGGAGAGAAGUCCUUa ||| || |||| ||||||| uuUUCAGUGGGUCUC-UCAGGAAg221307329[mm9:16:19946756-19946778:-]0.59691577-18.13-0.1546
MIMAT0003495mmu-miR-705239743Klhl6acgGGUGGGGUGGAGGGUGg :|| : :::||||||| cagUCAGUGUGUCUCCCACc218369388[mm9:16:19946697-19946716:-]0.57341497-25.37-0.4782
MIMAT0004938mmu-miR-875-3p239743Klhl6guaUCGGAGUCAUAAAAGUCc || | ||| ||||||| gacAGAC-CAG--UUUUCAGu219297314[mm9:16:19946771-19946788:-]0.59691457-10.66-0.3000
MIMAT0005293mmu-miR-467e239743Klhl6uguauAUG-UAC-GAGUGUGAAUa ||| :|| | ||||||| augccUACUGUGCCAGACACUUAc218190213[mm9:16:19946872-19946895:-]0.59691477-11.92-0.4040
MIMAT0005836mmu-miR-1186239743Klhl6guACGGAAAUUAAGGUC-GUGAg ||||| :| |||| |||| caUGCCUACUGUGCCAGACACUu221189211[mm9:16:19946874-19946896:-]0.59691280-23.07-0.5661
MIMAT0005855mmu-miR-467h239743Klhl6uguauAUG-UAC-GUGUGUGAAUa ||| :|| || ||||||| augccUACUGUGCCAGACACUUAc218190213[mm9:16:19946872-19946895:-]0.59691557-13.56-0.4040
MIMAT0007872mmu-miR-1906239743Klhl6ucgggacggaGUCCGACGACGu ::| ||||||| acuaugguaaUGGCCUGCUGCc213231252[mm9:16:19946833-19946854:-]0.59691447-16.47-0.2996
MIMAT0007873mmu-miR-1896239743Klhl6gaGGAGUGGGUGGU--AGUCUCUc || :||: |:| ||||||| caCCAUACUGCCUAAUUCAGAGAg221385408[mm9:16:19946677-19946700:-]0.57341517-22.03-0.7365
MIMAT0007874mmu-miR-1904239743Klhl6ggAGGGAGGUCUCCUCG-UCUUg ||:||| :|| ||| |||| ggUCUCUCAGGA--AGCAAGAAg221316336[mm9:16:19946749-19946769:-]0.59691250-17.37-0.7561
MIMAT0009402mmu-miR-1938239743Klhl6cuggcuUGAUGUUCAGGGUGGc | |::: ||||||| ccagucAGUGUGUCUCCCACCa217368389[mm9:16:19946696-19946717:-]0.57341447-15.09-0.4608
MIMAT0009406mmu-miR-1941-3p239743Klhl6uaCCCUCUAUGACGA-UUCUAc || | :| :|||| ||||| cuGGCAAGU-UUGCUAAAGAUa220450470[mm9:16:19946615-19946635:-]0.55781210-11.90-0.5587
MIMAT0009415mmu-miR-1948239743Klhl6gacaugcucacgaGACGGAUUu |||||||| gucucccaccauaCUGCCUAAu210379400[mm9:16:19946685-19946706:-]0.57341457-12.70-0.5061
MIMAT0009434mmu-miR-1961239743Klhl6aagauugaUGAUGGAGu |||||||| uugugugaACUACCUCa210143159[mm9:16:19946926-19946942:-]0.66241457-15.09-1.1103
MIMAT0000121mmu-let-7g239743Klhl6uuGACAUGUUUGAUGAUGGAGu :|||:::| |||||||| gcUUGUGUGA---ACUACCUCa221141159[mm9:16:19946926-19946944:-]0.66241527-19.13-1.1192
MIMAT0000122mmu-let-7i239743Klhl6uugucguguuugaUGAUGGAGu |||||||| aaugcuugugugaACUACCUCa210138159[mm9:16:19946926-19946947:-]0.66241457-15.56-1.1192
MIMAT0000123mmu-miR-1239743Klhl6uaugUAUGAAGAAAUGUAAGGu :|| | :|| ||||||| aaggGUAAUGUUUAACAUUCCa219165186[mm9:16:19946899-19946920:-]0.62971587-13.95-1.2299
MIMAT0000147mmu-miR-135a239743Klhl6aguguaUCCUUAUUU--UUCGGUau || || ||: |||||| ucaggaAGCAAGAAGCUAAGCCAaa318322346[mm9:16:19946739-19946763:-]0.59691320-13.37-0.1287
MIMAT0000155mmu-miR-142-3p239743Klhl6agGUAUUUCAUCCUUUGUG-AUGu | || ||: |:|||| ||| ugCCUACUGUGCCAGACACUUACc222191214[mm9:16:19946871-19946894:-]0.59691210-12.91-0.7998
MIMAT0000159mmu-miR-149239743Klhl6ccCUCACUUCUGUGC-CUC-GGUCu || || :||:|:| ||| |||| aaGAUUG-GGAUAUGUGAGACCAGc222110133[mm9:16:19946952-19946975:-]0.66241260-20.95-0.5856
MIMAT0000238mmu-miR-205239743Klhl6gucUGAGGCCACCUUACUUCCu ||| | |:||||||| ugaACUACCUCAGGAUGAAGGg220148169[mm9:16:19946916-19946937:-]0.62971517-18.34-0.3869
MIMAT0000239mmu-miR-206239743Klhl6ggugUGUGAAGGAAUGUAAGGu ::| | ::| ||||||| aaggGUAAUGUUUAACAUUCCa219165186[mm9:16:19946899-19946920:-]0.62971507-12.65-1.2312
MIMAT0004577mmu-miR-299239743Klhl6uucGCCAAAUGGCAGGGU-GUAu | || |::| ||||| ||| aguCAGUGUGUC-UCCCACCAUa220370391[mm9:16:19946694-19946715:-]0.57341210-16.65-0.4145
MIMAT0000383mmu-let-7d239743Klhl6uuGAUACGUUGGAUGAUGGAGa :|:||::| |||||||| gcUUGUGUGA---ACUACCUCa221141159[mm9:16:19946926-19946944:-]0.66241527-15.31-1.1148
MIMAT0000518mmu-miR-196a239743Klhl6ggguuguuGUAC-UUUGAUGGAu ::|| :|||||||| ggaaugcuUGUGUGAACUACCUc215136158[mm9:16:19946927-19946949:-]0.66241497-12.85-0.7825
MIMAT0000521mmu-let-7a239743Klhl6uuGAUAUGUUGGAUGAUGGAGu :|:|:::| |||||||| gcUUGUGUGA---ACUACCUCa221141159[mm9:16:19946926-19946944:-]0.66241487-17.14-1.1192
MIMAT0000522mmu-let-7b239743Klhl6uugguguguuggaUGAUGGAGu |||||||| aaugcuugugugaACUACCUCa210138159[mm9:16:19946926-19946947:-]0.66241457-15.09-1.1192
MIMAT0000523mmu-let-7c239743Klhl6uugguauguuggaUGAUGGAGu |||||||| aaugcuugugugaACUACCUCa210138159[mm9:16:19946926-19946947:-]0.66241457-15.56-1.1192
MIMAT0000524mmu-let-7e239743Klhl6uugauauguuggagGAUGGAGu ||||||| aaugcuugugugaaCUACCUCa29138159[mm9:16:19946926-19946947:-]0.66241407-17.56-1.1192
MIMAT0000525mmu-let-7f239743Klhl6uuGAUAUGUUAGAUGAUGGAGu :|:|:::| |||||||| gcUUGUGUGA---ACUACCUCa221141159[mm9:16:19946926-19946944:-]0.66241487-17.14-1.1170
MIMAT0000545mmu-miR-98239743Klhl6uuguuauguugaaUGAUGGAGu |||||||| aaugcuugugugaACUACCUCa210138159[mm9:16:19946926-19946947:-]0.66241457-16.00-1.1192
MIMAT0000612mmu-miR-135b239743Klhl6aguguaUCCUUACUUUUCGGUau | ||| | |||||| ggaagcAAGAA-GCUAAGCCAaa318325346[mm9:16:19946739-19946760:-]0.59691270-10.44-0.1287
MIMAT0000661mmu-miR-214239743Klhl6ugacggacagACACGGACGACa || |||||||| acuaugguaaUG-GCCUGCUGc213231251[mm9:16:19946834-19946854:-]0.59691467-19.57-0.3188
MIMAT0000741mmu-miR-377239743Klhl6uguUUUCAACGGAAACACACUa |:: ||| |||||||| gccAGGAAUGC--UUGUGUGAa220132151[mm9:16:19946934-19946953:-]0.66241487-14.19-1.0096
MIMAT0001076mmu-miR-384-3p239743Klhl6uaacacuuguuaaaGAUCCUUa ||||||| ucaucauggggcacCUAGGAAg2985106[mm9:16:19946979-19947000:-]0.54521407-13.92-0.2386
MIMAT0001081mmu-miR-196b239743Klhl6ggguuguuguCCUUUGAUGGAu | :|||||||| gaaugcuuguGUGAACUACCUc213137158[mm9:16:19946927-19946948:-]0.66241487-11.84-0.7789
MIMAT0003169mmu-miR-539239743Klhl6ugugUGGUUCCUAUUAAAGAGg | :|| ||| ||||||| agggAAUAAAGAU-AUUUCUCu219471491[mm9:16:19946594-19946614:-]0.55781567-10.54-0.7314
MIMAT0003893mmu-miR-761239743Klhl6acacaGUCAAAGUGGGACGACg ::|| :: ||||||| aacuaUGGUAAUGGCCUGCUGc218230251[mm9:16:19946834-19946855:-]0.59691457-17.46-0.3188
DNA & RNA Element - TRANSFAC
AccessionASDescriptionSpeciesEntrezPubmedBinding Info
G073287Klhl6Mus musculus239743
DNA & RNA Element - RepTar
Gene NamemiRNABeginEndProfile
Klhl6mmu-miR-467hbeg:196end:213pic:3' TGTATATGTAC-GTGTGTGAATA 5'& .|| || ||||||| &5' --------GTGCCAGACACTTA- 3'
Klhl6mmu-miR-15astarbeg:230end:248pic:3' ACTCCGTCGTGTCA-TACCGGAC 5'& .|..|| |||||||| &5' --------TATGGTAATGGCCTG 3'
Klhl6mmu-miR-539beg:474end:492pic:3' TGTGTGGTTCCTATTAAAGAGG 5'& .|| ||| |||||||. &5' ------TAAAGAT-ATTTCTCT 3'
Klhl6mmu-miR-145starbeg:122end:141pic:3' GTTCTTGTCATAAAGGTCCTTA 5'& .||| ||| |||||||| &5' -GAGACCAG-----CCAGGAAT 3'
Klhl6mmu-let-7dbeg:140end:159pic:3' TTGATACGTTGGATGATGGAGA 5'& .|.|| | |||||||| &5' --TTGTGTGA---ACTACCTC- 3'
Klhl6mmu-let-7abeg:140end:160pic:3' TTGATATGTTGGATGATGGAGT 5'& .|.|. | ||||||||| &5' --TTGTGTGA---ACTACCTCA 3'
Klhl6mmu-let-7bbeg:140end:160pic:3' TTGGTGTGTTGGATGATGGAGT 5'& . .. | ||||||||| &5' --TTGTGTGA---ACTACCTCA 3'
Klhl6mmu-let-7cbeg:140end:160pic:3' TTGGTATGTTGGATGATGGAGT 5'& . |. | ||||||||| &5' --TTGTGTGA---ACTACCTCA 3'
Klhl6mmu-let-7ebeg:140end:160pic:3' TTGATATGTTGGAGGATGGAGT 5'& .|.|. | |||||||| &5' --TTGTGTGAA---CTACCTCA 3'
Klhl6mmu-let-7fbeg:140end:160pic:3' TTGATATGTTAGATGATGGAGT 5'& .|.|. | ||||||||| &5' --TTGTGTGA---ACTACCTCA 3'
Klhl6mmu-let-7gbeg:140end:160pic:3' TTGACATGTTTGATGATGGAGT 5'& .|||. | ||||||||| &5' --TTGTGTGA---ACTACCTCA 3'
Klhl6mmu-let-7ibeg:142end:160pic:3' TTGTCGTGTTTGATGATGGAGT 5'& |.. | ||||||||| &5' ----GTGTGA---ACTACCTCA 3'
Klhl6mmu-miR-1961beg:148end:160pic:3' AAGATTGATGATGGAGT 5'& ||||||||| &5' --------ACTACCTCA 3'
Klhl6mmu-miR-384-3pbeg:88end:106pic:3' TAACACTTGTTAAAGATCCTTA 5'& || |..|| ||||||| &5' --TG-GGGCAC---CTAGGAA- 3'
Klhl6mmu-miR-509-5pbeg:0end:14pic:3' TACTAACGGTGTAAGACCTCAT 5'& |.|| ||||||| &5' -------CTACCC-CTGGAGT- 3'
Klhl6mmu-miR-686beg:314end:333pic:3' AGAAGTGGCAGAC---CCTTCGTTA 5'& |||| |||||||| &5' --------GTCTCTCAGGAAGCAA- 3'
Klhl6mmu-miR-684beg:401end:415pic:3' AACTGAACTTCCCTTTTGA 5'& ||. ||||||| &5' -------GAGAGGAAAAC- 3'
Klhl6mcmv-miR-M44-1beg:470end:485pic:3' TGGCGCCGAGACCTT-TTTCTAT 5'& |||| ||||||| &5' -----------GGAATAAAGATA 3'
Klhl6mmu-let-7cbeg:21end:47pic:3' TTGGTATG---TTGGATGA-TGGAGT 5'& |.|||| |.|.|.| || || &5' --CTATACCCTAGCTTGCCCACGTC- 3'
Klhl6mmu-miR-1198beg:122end:143pic:3' GGTTC-GGTCGGTCCTTGTGTAT 5'& .|| |||||||||||..| &5' --GAGACCAGCCAGGAATGC--- 3'
Klhl6mmu-miR-122beg:170end:187pic:3' GTTTGTGGTAACAG--TGTGAGGT 5'& |||. |||.|||| &5' ----------TGTTTAACATTCCA 3'
Klhl6mmu-miR-124starbeg:4end:24pic:3' TAGTTC-CAGGCGACACTTGTGC 5'& | .| |||. |||.||| &5' --CTGGAGTCTC---TGAGCAC- 3'
Klhl6mmu-miR-129-5pbeg:92end:114pic:3' CGTTCGGGTCTGGC-GTTTTTC 5'& ||| ||.||. | ||||.| &5' GCA--CCTAGGAAGACAAAGA- 3'
Klhl6mmu-miR-145starbeg:308end:328pic:3' GTTCTTGTCATAAAG---GTCCTTA 5'& ||||. || |||||| &5' ------CAGTGGGTCTCTCAGGAA- 3'
Klhl6mmu-miR-145starbeg:400end:419pic:3' GTTCTTGTCATAAAGGTCCTTA 5'& |||. || |||||| &5' --AGAG-AGGAAAA-CAGGAA- 3'
Klhl6mmu-miR-150starbeg:181end:206pic:3' GATAGGGG-GTCCGG---ACATGGTC 5'& ||| || ||| |||.|||| &5' ---TCCATACATGCCTACTGTGCCAG 3'
Klhl6mmu-miR-17beg:188end:212pic:3' GATGGACGTGACAT--TC-GTGAAAC 5'& |.||| |||||. || ||||| &5' -TGCCT--ACTGTGCCAGACACTT-- 3'
Klhl6mmu-miR-182beg:191end:207pic:3' GCCACACTCAAGATGGTAACGGTTT 5'& ||||.. |||||.| &5' -----------CTACTG-TGCCAGA 3'
Klhl6mmu-miR-182beg:234end:254pic:3' GCCACACTCAAGATGGTAACGGTTT 5'& ||| | ||.| |||||.| &5' -GGTAAT-GGCCTGC---TGCCAGA 3'
Klhl6mmu-miR-1839-3pbeg:309end:321pic:3' CGACAACCATCTATTCATCCAGA 5'& |||.||||| &5' --------------AGTGGGTCT 3'
Klhl6mmu-miR-184beg:430end:452pic:3' TGGGAATAGTCA-----AGAGGCAGGT 5'& ||.| ||||.|||. &5' -------TCGGCTGGTGTCTCTGTCT- 3'
Klhl6mmu-miR-1896beg:389end:409pic:3' GAGGAGTGGGTGGTAGTCTCTC 5'& || .||.| |||||||| &5' ---CT-GCCTAAT-TCAGAGAG 3'
Klhl6mmu-miR-1903beg:317end:337pic:3' ACAGAGTCCTTC-TTCTTCTTCC 5'& |||||||||| |||||| &5' --TCTCAGGAAGCAAGAAG---- 3'
Klhl6mmu-miR-1929beg:255end:278pic:3' GAGACG-AGATATTT-CAGGATCTT 5'& || || ||. |||.||||. &5' ----GCATC-ATGCCTGTCTTAGAG 3'
Klhl6mmu-miR-1935beg:430end:451pic:3' TCTCTAGGCGGT--CGGAGACGGA 5'& || ||. |.|||||.|| &5' -----TCGGCTGGTGTCTCTGTCT 3'
Klhl6mmu-miR-1941-5pbeg:369end:386pic:3' TTCGGAGACATGGTCG--TAGAGGGA 5'& .|||. .|||||| &5' -----------TCAGTGTGTCTCCC- 3'
Klhl6mmu-miR-196abeg:138end:158pic:3' GGGTTGT-TGTACTTTGATGGAT 5'& .| . || |||||||| &5' ----GCTTGTGTG-AACTACCT- 3'
Klhl6mmu-miR-196abeg:380end:399pic:3' GGGTTGTTGTACTTTGATGGAT 5'& |||| || |||.|||| &5' CCCACCAT------ACTGCCTA 3'
Klhl6mmu-miR-196bbeg:138end:158pic:3' GGGTTGTTGTCCTTTGATGGAT 5'& .| | |||||||| &5' ----GCTTGTGTGAACTACCT- 3'
Klhl6mmu-miR-204beg:272end:286pic:3' TCCGTATCCTACTGTTTCCCTT 5'& || .||||||| &5' -----------GAGGAAGGGAA 3'
Klhl6mmu-miR-205beg:148end:169pic:3' GTCTGA-GGCCACCTTACTTCCT 5'& ||| || |.|||||||. &5' ---ACTACCTCA-GGATGAAGGG 3'
Klhl6mmu-miR-208abeg:254end:275pic:3' TGTTCGAAAAACGAGCAGAATA 5'& ||| ||| .|||||| &5' ---AGCATCATGCCTGTCTTA- 3'
Klhl6mmu-miR-211beg:272end:286pic:3' TCCGTTTCCTACTGTTTCCCTT 5'& || .||||||| &5' -----------GAGGAAGGGAA 3'
Klhl6mmu-miR-211beg:464end:476pic:3' TCCGTTTCCTACTGTTTCCCTT 5'& ||. ||||||| &5' -----------GAT-AAGGGAA 3'
Klhl6mmu-miR-24beg:44end:62pic:3' GACAAGGACGACTTGACTCGGT 5'& |||||| || ||||||| &5' --GTTCCT--TG---TGAGCCA 3'
Klhl6mmu-miR-29bstarbeg:117end:134pic:3' ATTTGGTGGTATACTTTGGTCG 5'& .||.|||.|||||| &5' --------TATGTGAGACCAGC 3'
Klhl6mmu-miR-30c-2starbeg:370end:387pic:3' TCTCATTTGTCGGA-AGAGGGTC 5'& |||. | ||||||| &5' --------CAGTGTGTCTCCCA- 3'
Klhl6mmu-miR-323-3pbeg:156end:176pic:3' TCTCCAGCTGGCACATTACAC 5'& ||| .|| | ||||||| &5' --AGGATGAAGG-GTAATGT- 3'
Klhl6mmu-miR-327beg:139end:162pic:3' TAGGAGTACGG-----GGAGTTCA 5'& || ||. |||||.| &5' ---CTTGTGTGAACTACCTCAGG- 3'
Klhl6mmu-miR-331-5pbeg:178end:197pic:3' CCTAGGGACCCTGGTATGGATC 5'& ||.|| |||.|||| &5' --ATTCCATA---CATGCCTA- 3'
Klhl6mmu-miR-34b-5pbeg:386end:398pic:3' TGTTAGTCGATTAATGTGACGGA 5'& |.||||||| &5' --------------ATACTGCCT 3'
Klhl6mmu-miR-34cbeg:383end:398pic:3' CGTTAGTCGATTGATGTGACGGA 5'& || |.||||||| &5' -----------ACCATACTGCCT 3'
Klhl6mmu-miR-377beg:131end:151pic:3' TGTTTTCAACGGAAACACACTA 5'& ||..| |||. ||||||| &5' -CAGGAA-TGCT--TGTGTGA- 3'
Klhl6mmu-miR-378starbeg:308end:328pic:3' TGTGTCCTGGACCTCAGTCCTC 5'& || || || |||||| &5' -CAGTGGGTCTC---TCAGGA- 3'
Klhl6mmu-miR-409-3pbeg:164end:185pic:3' TCCCCAAGTGGCTCGTTGTAAG 5'& |||| .| .||||||| &5' --GGGTAA--TGTTTAACATTC 3'
Klhl6mmu-miR-449abeg:376end:397pic:3' TGGTC-GATTGTTATGTGACGGT 5'& | || || |.|||||| &5' ----GTCTCCCACCATACTGCC- 3'
Klhl6mmu-miR-449bbeg:376end:398pic:3' CGGTCGATTGTTGTGACGGA 5'& |.| || |.||||||| &5' GTCTCCC-ACCATACTGCCT 3'
Klhl6mmu-miR-467ebeg:192end:213pic:3' TGTATATG-TACGAG-TGTGAATA 5'& ||| .||| ||||||| &5' -----TACTGTGCCAGACACTTA- 3'
Klhl6mmu-miR-470beg:120end:140pic:3' TGAGTGGTCAC---GGTCAGGTTCTT 5'& ||| |||| |||.||| &5' --------GTGAGACCAG-CCAGGAA 3'
Klhl6mmu-miR-666-5pbeg:252end:271pic:3' CCGAGAGTGTCGAC--ACGGGCGA 5'& |.||| ||||.|. &5' -------ATAGCATCATGCCTGT- 3'
Klhl6mmu-miR-673-3pbeg:0end:12pic:3' CCACGTGTCTTGAGTCGGGGCCT 5'& || |||.||| &5' -----------CTAC-CCCTGGA 3'
Klhl6mmu-miR-676beg:138end:165pic:3' TCGAG-----TTGTTGGAGTCCTGCC 5'& |||. ||| |||||||||.| &5' -GCTTGTGTGAACTACCTCAGGATG- 3'
Klhl6mmu-miR-684beg:91end:109pic:3' AACTGAACTTCCCTTTTGA 5'& |.| ||||.|| &5' --GGCACCTA-GGAAGAC- 3'
Klhl6mmu-miR-691beg:311end:328pic:3' AAAAGACGGAGAGAAGTCCTTA 5'& || |||| ||||||| &5' -----TGGGTCTC-TCAGGAA- 3'
Klhl6mmu-miR-698beg:271end:293pic:3' TC-CCTTCCTTTGCTCTTAC 5'& || ||||||.|| .||.| &5' AGAGGAAGGGAAAAGGAGT- 3'
Klhl6mmu-miR-705beg:368end:389pic:3' ACGGGTGGGGTGGAGGGTGG 5'& | .|| . . |||||||| &5' -G-TCAGTGTGTCTCCCACC 3'
Klhl6mmu-miR-713beg:364end:379pic:3' CGACACACGGA-AGTCACGT 5'& ||| ||||||. &5' -------GCCAGTCAGTGT- 3'
Klhl6mmu-miR-717beg:432end:453pic:3' TCTCTTCCATAGAGACAGACTC 5'& .| |||.||||||||||. &5' --GGCTGGTGTCTCTGTCTGG- 3'
Klhl6mmu-miR-741beg:309end:325pic:3' AGATGTATCTTACCGTAGAGAGT 5'& |.||| .||||||| &5' ---------AGTGG-GTCTCTCA 3'
Klhl6mmu-miR-743b-5pbeg:5end:23pic:3' ACTACCTGTGGTCAGACTTGT 5'& |||| | |||||.|| &5' ---TGGAGTC---TCTGAGCA 3'
Klhl6mmu-miR-758beg:120end:140pic:3' ATCAC-CTGGTCCAGTGTTT 5'& ||| |||||| || .|| &5' --GTGAGACCAGC-CAGGAA 3'
Klhl6mmu-miR-764-5pbeg:6end:25pic:3' TCCTCCTGTACACTCGTGG 5'& |||| | |||||||| &5' -GGAGT-CTC-TGAGCACC 3'
Klhl6mmu-miR-770-3pbeg:28end:57pic:3' GGTCGA---GGTGCAGTCC-GGGTGC 5'& |.|||| |||||||. |. .| &5' CTAGCTTGCCCACGTCGTTCCTTGTG 3'
Klhl6mmu-miR-875-3pbeg:287end:314pic:3' GTATCGGAGTCA-------TAAAAGTCC 5'& ||..|||| .||||||| &5' ---AGTTTCAGACAGACCAGTTTTCAG- 3'
Klhl6mmu-miR-879starbeg:43end:67pic:3' GGCTTTCGAAC-TTCGGTATTCG 5'& || |||| .|||||||.|| &5' -CGTTC-CTTGTGAGCCATAGGC 3'
Klhl6mmu-miR-881starbeg:478end:493pic:3' TCTACACTGACAATAGAGAGAC 5'& | |||.|||||| &5' ----------GATATTTCTCTG 3'
Klhl6mmu-miR-883b-5pbeg:294end:316pic:3' ACTGACGATGGGTAAGAGTCAT 5'& ||| ||| .||.|||||. &5' -GACAG--ACCAGTTTTCAGTG 3'
Klhl6mmu-miR-96beg:236end:254pic:3' TCGTTTTTACACGATCACGGTTT 5'& |||| ||. |||||.| &5' ------AATGGCCTGCTGCCAGA 3'
Klhl6mmu-miR-98beg:138end:160pic:3' TTGT-TATGTTGAATGATGGAGT 5'& .| .|. | ||||||||| &5' -GCTTGTGTGA---ACTACCTCA 3'
Klhl6mmu-miR-1938beg:379end:389pic:3' CTGGCTTGATGTTCAGGGTGGC 5'& ||||||| &5' --------------TCCCACC- 3'
Klhl6mmu-miR-1948beg:389end:400pic:3' GACATGCTCACGAGACGGATTT 5'& |||||||| &5' -------------CTGCCTAA- 3'
DNA & RNA Element - miRNAMap
Gene NameMature miRNATarget StartTarget EndmiRNA 3-5AlignmentTarget 5-3
Klhl6mmu-let-7f138161UGAUAUGU---UAGAUGAUGGAGU- ||:| :| |||||||||--AAUGCUUGUGUGAACUACCUCAG
Klhl6mmu-let-7i129161UGUCGUGUU----UGA-------UGAUGGAGU- |||| ||: :|| |||||||||CCAGC-CAGGAAUGCUUGUGUGAACUACCUCAG
Klhl6mmu-miR-1166188AUGUAUGAAGAAAUGUAAGGU- : :|| :|| ||||||||AGGGUAAUGUUUAACAUUCCAU
Klhl6mmu-miR-103232253AGUAUCGGGACAUGUUACGACGA :||:|: || | ||||||CUAUGGUAAUGGCC--UGCUGCC
Klhl6mmu-miR-125a297329GUGUC----CAAUUU---CCCAGAGUC-CCU- |||| ||| ||||||| |||GACAGACCAGUUUUCAGUGGGUCUCUCAGGAA
Klhl6mmu-miR-125b301329AGUGUUCAAU-----CCCAGAGUC-CCU- || |||| ||||||| |||-GACCAGUUUUCAGUGGGUCUCUCAGGAA
Klhl6mmu-miR-129-5p311338-UCGUUCG---GGUCUGGCGUUUUUC- ||: |: :|||: ||||:|||CAGUGGGUCUCUCAGGAAGCAAGAAGC
Klhl6mmu-miR-133a74101UGUCGA---CCAACUU---CCCC-UGGUU :||| |||| |||| |||-GGGCUUAAGGUUCAUCAUGGGGCACCU-
Klhl6mmu-miR-133b74101AUCGA---CCAACUU---CCCC-UGGUU :||| |||| |||| |||GGGCUUAAGGUUCAUCAUGGGGCACCU-
Klhl6mmu-miR-134351376GGGGAGACCAGU------UGGUCAGUGU :|| |||| :|||||||AUCCA--GGUCUUUCCACGCCAGUCAG-
Klhl6mmu-miR-135a400425-AGUGUAUCCUUA--UUUUUCGGUAU ||| | ||||| |::||||||UUCAGAGAGGAAAACAGGAAGCCAA-
Klhl6mmu-miR-141352380-GGU--AGAAA----UGGUCUGUCACAAU ||| ||||| :|||| ||||||UCCAGGUCUUUCCACGCCAGUCAGUGUG-
Klhl6mmu-miR-14991139-CCUCA------CUUCUGU-----GCC-------------UCGGUCU ||:| ||||||| :|| ||||||:UGGGGCACCUAGGAAGACAAAGAUUGGGAUAUGUGAGACCAGCCAGGA
Klhl6mmu-miR-151431455GGAGUU--CCUCGGAGUCAGAUC- :||: || |:||| ||||:|AUUCGGCUGGUGUCUCUGUCUGGC
Klhl6mmu-miR-17-5p190213UGAUGGACGUGACAU--UC-GUGAAAC |:||| |||||: || |||||-AUGCCU--ACUGUGCCAGACACUUA-
Klhl6mmu-miR-184366391-UGGGAAUAGUCA---AGAGGCAGGU- :|| :||||| ||||| |||CGCCA--GUCAGUGUGUCUCCCACCAU
Klhl6mmu-miR-188242286-UGGGA---GGU-------GGUACG------------UUCCCUAC :||: ||| :||||| ||||||GGCCUGCUGCCAGAUAGCAUCAUGCCUGUCUUAGAGGAAGGGAA-
Klhl6mmu-miR-193114138GACCCUGAAACAUC-----CGGUCAA |||||: |||: |||||UUGGGAUA-UGUGAGACCAGCCAGG-
Klhl6mmu-miR-196a132159-GGUUGUUG----UAC-UUUGAUGGAU |||: ||: :|| :||||||||GCCAGGAAUGCUUGUGUGAACUACCUC
Klhl6mmu-miR-196b128159-GGUUGUUGUCCU-----------UUGAUGGAU |||:| ||||| ||||||||ACCAGC--CAGGAAUGCUUGUGUGAACUACCUC
Klhl6mmu-miR-199a*191223UUGGUU-ACAC-GUCUGA-------UGACAU- :|| |||| ||||| |:||||UGCCUACUGUGCCAGACACUUACCCAUUGUAA
Klhl6mmu-miR-200a356380UGUAGCAA----UGGUCUGUCACAAU :|| || :|||| ||||||-GGUCUUUCCACGCCAGUCAGUGUG-
Klhl6mmu-miR-200b356380-CAGU-AGUAAUGGUCCGUCAUAAU ||| || :|||| ||||:|GGUCUUUCCACGCCAGUCAGUGUG-
Klhl6mmu-miR-20492121GUCCGU--AUCCUACUGUUU----CCCUU :|||| ||||| |||||| ||||GGGGCACCUAGGAAGACAAAGAUUGGGAU
Klhl6mmu-miR-206183206-GGUGUGUGAAGGAAUGUAA-GGU- |||:|||: ||| || |||UCCAUACAUG-CCU-ACUGUGCCAG
Klhl6mmu-miR-20b190213-AUGGACGUGAUAC--UC-GUGAAAC |:||| |||:|| || |||||AUGCCU--ACUGUGCCAGACACUUA-
Klhl6mmu-miR-21192121-UCCGUU--UCCUACUGUUU----CCCUU :|||| |||| |||||| ||||GGGGCACCUAGGAAGACAAAGAUUGGGAU
Klhl6mmu-miR-214242272GACGGACAGAC-------------ACGGACGACA ||||| ||| ||||||:-GGCCUG-CUGCCAGAUAGCAUCAUGCCUGUC--
Klhl6mmu-miR-244663GACAAGGACGACUUGACUCGGU- |||||| || |||||||-CGUUCCU--UG---UGAGCCAU
Klhl6mmu-miR-290438463UUUUUCACGGGGGUA------UCAAACUC :|||:|:|::| ||||||---UGGUGUCUCUGUCUGGCAAGUUUGC-
Klhl6mmu-miR-29660102-UGUCCUAACU---CCC---------------CCCCG-GGA |:||| |||: ||| ||||| |||CAUAGGCUUGGCUUGGGCUUAAGGUUCAUCAUGGGGCACCUA
Klhl6mmu-miR-298235254-CCUUCUUGUCGGGAGGAGACGG- || ||::|||: |||||UGGU--AAUGGCCUG---CUGCCA
Klhl6mmu-miR-29a422445-UUGGCUA--AAGUCUACCACGAU |||| |||:| |||||:CAACCACAAAUUCGGCUGGUGUC-
Klhl6mmu-miR-31241270GUC-GAU-ACGG----UCGUAGAACGGA- :| ||: |||| |||||| |||||UGGCCUGCUGCCAGAUAGCAUCAUGCCUG
Klhl6mmu-miR-3251536UGUGAAUGACUCGUGGAU----GAUCC ||||||||||| ||||------UCUGAGCACCUAUACCCUAGC
Klhl6mmu-miR-3317198AAGAUCCUA--UCCGGGU----CCCCG- :|:|| |||::|| |||||-CUUGGGCUUAAGGUUCAUCAUGGGGCA
Klhl6mmu-miR-33992121ACUCGAGGA-CCUCCUGU------CCCU- |:|| ||| ||| |||| ||||GGGGCACCUAGGAAGACAAAGAUUGGGAU
Klhl6mmu-miR-3465599UCUCC--GUCCG---UGAGCCCG---------------UCUGU ||| :|||| :||:|||| :|:||UGAGCCAUAGGCUUGGCUUGGGCUUAAGGUUCAUCAUGGGGCAC
Klhl6mmu-miR-34b368400-GUUAGUCGAUUAA-------UGUGACGGAU- ||:||||: |:||||||||CCAGUCAGUGUGUCUCCCACCAUACUGCCUAA
Klhl6mmu-miR-34c368399CGUUAGUCGAUU-GA------UGUGACGGA- ||:||||: || |:|||||||CCAGUCAGUGUGUCUCCCACCAUACUGCCUA
Klhl6mmu-miR-350101129ACUUUCACAU----ACCCGAAACACUU- |:||| |||| |||||:AGGAAGACAAAGAUUGGGAUAUGUGAGA
Klhl6mmu-miR-3516197-GUCCGAGUUU--CCCGAGG-------AGU-CCCU- :|||||::: |||||: ||| |||:AUAGGCUUGGCUUGGGCUUAAGGUUCAUCAUGGGGC
Klhl6mmu-miR-36294122AAGUGUGGAUCCAAG-GU------UCCUAA :|||||||| || :||||--GGCACCUAGGAAGACAAAGAUUGGGAUA
Klhl6mmu-miR-370352380UUGGUCCA---AGGUGGGGUC-GUC-CG- |||||| ||||| |||| ||| |:-UCCAGGUCUUUCCACGCCAGUCAGUGUG
Klhl6mmu-miR-377133152UGUUUUCAACGGAAACACACUA ||::| |||: |||||||CCAGGAA-UGCU--UGUGUGAA
Klhl6mmu-miR-424231253AGGUUUUG-UACUUAACGACGAC |:| |||: ||||||ACUAUGGUAAUGGCCUGCUGCC-
Klhl6mmu-miR-433-3p6995UGUGGCUCC-----UCGGGUAGUACUA :|: :|| :|::|||||||:-GGCUUGGGCUUAAGGUUCAUCAUGGG
Klhl6mmu-miR-449249273-UGGUCGAUUGU--UAUGUGACGGU :|||| ||:|| ||:| |||:|UGCCAGAUAGCAUCAUGC-CUGUCU
Klhl6mmu-miR-449b250274-GGUCGAUCGU--UACGUGACGGA- |||| ||||| |||| |||:||GCCAGAUAGCAUCAUGC-CUGUCUU
Klhl6mmu-miR-455-3p373397-UCACAUAUACGGGCACC-UGACGUA |||||:| ||| |||||CAGUGUGUCU-CCCACCAUACUGCC-
Klhl6mmu-miR-4645977AUAGAGUGUCUUAUUUGAACCAU ||:||: ::|||||----CCAUAGGCUUGGCUUGGG-
Klhl6mmu-miR-467*185215GUAUAUGUACG----------UCCGUGAAUG- |||||||| || |||||||--CAUACAUGCCUACUGUGCCAGACACUUACC
Klhl6mmu-miR-46992120-CCUGUGG-UUCUA--GUUACUUUCUCCGU ||:|||| |:|| ||| || |:|GGGGCACCUAGGAAGACAAAGAUUGGGA--
Klhl6mmu-miR-470249279AGUGGUC---------ACGGUCAGGUUCUU- :|||| |||| |||: |||:-UGCCAGAUAGCAUCAUGCCUGUCUUAGAGG
Klhl6mmu-miR-483273294UGUUCUGCCCUCCCC--UCCUCACU ||| || |||| ||||||--UAGA-GGAAGGGAAAAGGAGUU-
Klhl6mmu-miR-490303328-GUCG-----UACCUCAGGAGGUCCAAC |||: :||| |||: :||||CCAGUUUUCAGUGG-GUCUCUCAGGA--
Klhl6mmu-miR-499256277UUUGUAGUGACGUUCAGAAUU- |:||||| ||| ||||||:UAGCAUCA-UGCCUGUCUUAGA
Klhl6mmu-miR-503235253CGUCAUGACAAGGGCGACGAU :||| ||:|||||-UGGUAAUGG-CCUGCUGCC-
Klhl6mmu-miR-546376392-CUGAGGCACGGUGGUA- | ||: |||||||UGUGUCUC--CCACCAUA
Klhl6mmu-miR-551b296321GUGACU--UUGGUUCA-----UACCCAGC || :||| ||| :||||||---AGACAGACC-AGUUUUCAGUGGGUCU
Klhl6mmu-miR-6521944ACGUGU---UGGGAUCAC-CGCGGUAA |||| ||||||| || |||AGCACCUAUACCCUAGCUUGC-CCAC-
Klhl6mmu-miR-666843-CCG-AGAGUGUCGAC-------------ACGGGCGA || |||| ||| |||||UGGAGUCUCUGAGCACCUAUACCCUAGCUUGCCCA--
Klhl6mmu-miR-66770105-GAACCCGAC--CCA---------CCGU----CCACAGU |||||||| ||| |||| ||GCUUGGGCUUAAGGUUCAUCAUGGGGCACCUAGGA----
Klhl6mmu-miR-670384412AAGUGGUGU-AUG---UGAGUC---CCUA |||||:| |:| |:|||| |||-CCACCAUACUGCCUAAUUCAGAGAGGAA
Klhl6mmu-miR-676140166UCGAG-----UUGUUGGAGUCCUGCC |||: ||| |||||||||:|UGCUUGUGUGAACUACCUCAGGAUGA
Klhl6mmu-miR-679335375-UGGUUC--------------UCAGU--GGAGU-GUCAGG :|:||| :||| || |: |||||AGCUAAGCCAAAAUAAAUCCAGGUCUUUCCACGCCAGUCA
Klhl6mmu-miR-684267289AACUGAA----CUUCCCUUUUGA || ||| ||||||||||CUGUCUUAGAGGAAGGGAAAAG-
Klhl6mmu-miR-685198221-CACGGAGUG-GAGUCGGUAACU ||||| || ||:| ||||||UGUGCCAGACACUUACCCAUUGU
Klhl6mmu-miR-686306334-AGAAGUGG--CAGAC---CCUUCGUUA |:|||| : |||| ||||||||GUUUUCAGUGGGUCUCUCAGGAAGCAAG
Klhl6mmu-miR-688235250CUUAUUCAUCAGCGGACGCU :||| | ||||||----UGGUAAUGGCCUGCU-
Klhl6mmu-miR-694292315GAAGUCCGUUG---UAAAAGUC- ||||| ||: :|||||||UUUCAGACAGACCAGUUUUCAGU
Klhl6mmu-miR-6951648AAGUCAGUGGAU----------ACGGGU-UAGA | || |||||| |||||| :||CUGAG-CACCUAUACCCUAGCUUGCCCACGUCG
Klhl6mmu-miR-6962847-GGGUGUCGUUCGUGUGCG- ||| :||| || ||||:ACCC-UAGCUUGCCCACGUC
Klhl6mmu-miR-697151172AGA-GGUGUCCUGG-UCCUACAA || || |||||: |||:|ACUACCUCAGGAUGAAGGGUA--
Klhl6mmu-miR-699249270GCUCGGUCCAGCGUG--ACGGA- ||||| |||: |||||--UGCCAGAUAGCAUCAUGCCUG
Klhl6mmu-miR-7342367-GUUGU-UUUAGUGAUCAGA-AGGU- ||| ||||| | :|||| ||||CCAAAAUAAAUC-CAGGUCUUUCCAC
Klhl6mmu-miR-7026899CUCGC-CCCAU-UUCCCA-------CCCGU- :|| ||| |||| |||||UGGCUUGGGCUUAAGGUUCAUCAUGGGGCAC
Klhl6mmu-miR-705361390ACGGGUGGGGU---------GGAGGGUGG- :|||| ||| :||||||||-UUCCACGCCAGUCAGUGUGUCUCCCACCA
Klhl6mmu-miR-709243270AGGAGGACGG--------AG-ACGGAGG ||| ||||| || |||||GCCUGCUGCCAGAUAGCAUCAUGCCUG-
Klhl6mmu-miR-711297323GAAUGUA-----GAGAGGGGCCCAGGG- ||| :|:|| :|||||:|--GACAGACCAGUUUUCAGUGGGUCUCU
Klhl6mmu-miR-717434455UCUCUUCCAUAGAGACAGACUC :| |||:||||||||||:-CGGCUGGUGUCUCUGUCUGGC
Klhl6mmu-miR-741297326GAUGUA---UC-----UUACCGUAGAGAGU- ||| || |:||| :|||||||-GACAGACCAGUUUUCAGUGG-GUCUCUCAG
Klhl6mmu-miR-743430447AGAUGAGUCGAACCACAGAAA |:||:|| ||||||||--AAUUCGGC-UGGUGUCUC-
Klhl6mmu-miR-764-5p100136-UCCU------------CCUGUACACUCG---UGG- |||| |||:||||||| :||UAGGAAGACAAAGAUUGGGAUAUGUGAGACCAGCCA
Klhl6mmu-miR-7b348367UUGUUUUAGUGUUCAGA-AGGU- ||||| ||:|||| ||||---UAAAUC-CAGGUCUUUCCAC
Klhl6mmu-miR-98134161-UUGUUAUG--UUGAA-UGAUGGAGU- |: |||:| : | |||||||||CAGGAAUGCUUGUGUGAACUACCUCAG
Klhl6mmu-let-7a152159------------------------UGA-UAUGUUGGAUGAUGGAGU :|| :|: | |||||||||GGAUAUGUGAGACCAGCCAGGAAUGCUUGUGUGA---ACUACCUCAG
Klhl6mmu-let-7b152159--------------UUGGUGUGU-UGGA------UGAUGGAGU |:||| : :|:| |||||||||GGAUAUGUGAGACCAGCCAGGAAUGCUUGUGUGAACUACCUCAG
Klhl6mmu-let-7c152159--------------UUGGUAUGU-UGGA------UGAUGGAGU |:||| :|:| |||||||||GGAUAUGUGAGACCAGCCAGGAAUGCUUGUGUGAACUACCUCAG
Klhl6mmu-let-7d152159------------------------UGA-UACGUUGGAUGAUGGAGA :|| :|| | ||||||||GGAUAUGUGAGACCAGCCAGGAAUGCUUGUGUGA---ACUACCUCA
Klhl6mmu-let-7e152159------------------------UGA-UAUGUUGGAGGAUGGAGU :|| :|: | ||||||||GGAUAUGUGAGACCAGCCAGGAAUGCUUGUGUGAA---CUACCUCAG
Klhl6mmu-let-7f152159------------------------UGA-UAUGUUAGAUGAUGGAGU :|| :|: | |||||||||GGAUAUGUGAGACCAGCCAGGAAUGCUUGUGUGA---ACUACCUCAG
Klhl6mmu-let-7g152159------------------------UGA-CAUGUUUGAUGAUGGAGU :|| ||: | |||||||||GGAUAUGUGAGACCAGCCAGGAAUGCUUGUGUGA---ACUACCUCAG
Klhl6mmu-let-7i152159U------------GUCGUGUU----UGA-------UGAUGGAGU |||| ||: :|| |||||||||GGAUAUGUGAGACCAGC-CAGGAAUGCUUGUGUGAACUACCUCAG
Klhl6mmu-miR-1179186A----------------------UGUAUGAAGAAAUGUAAGGU : :|| :|| ||||||||UGUGUGAACUACCUCAGGAUGAAGGGUAAUGUUUAACAUUCCAU
Klhl6mmu-miR-196a151158-----------------GGUUGUUG----UAC-UUUGAUGGAU |||: ||: :|| :||||||||GGGAUAUGUGAGACCAGCCAGGAAUGCUUGUGUGAACUACCUC
Klhl6mmu-miR-196b151158-------------GGUUGUUGUCC-----------UUUGAUGGAU |||:| |||| :||||||||GGGAUAUGUGAGACCAGC--CAGGAAUGCUUGUGUGAACUACCUC
Klhl6mmu-miR-199a*194201UU-----------------------GGUUAC-ACGUCUGAUGACAU ||| ||| |||||||:AGGAUGAAGGGUAAUGUUUAACAUUCCAUACAUGC---CUACUGUGC
Klhl6mmu-miR-205162169-------GUCUGA--GGCCAC------------CUUACUUCCU |||: |: ||| |:|||||||:GACCAGCCAGGAAUGCUUGUGUGAACUACCUCAGGAUGAAGGGU
Klhl6mmu-miR-206179186GGUGUG-UGAAGGAA--------------------UGUAAGGU ||| ||| ||||||||UGUGUGAACUACCUCAGGAUGAAGGGUAAUGUUUAACAUUCCAU
Klhl6mmu-miR-214244251--------GACGG-------------ACAG--ACACGGACGACA :||: || || ||||||||CUUACCCAUUGUAAUUUACUUAACUAUGGUAAUG-GCCUGCUGC
Klhl6mmu-miR-34b391398-------------GUUAGUCGAUUAA-------UGUGACGGAU ||:||||: |:||||||||GGUCUUUCCACGCCAGUCAGUGUGUCUCCCACCAUACUGCCUAA
Klhl6mmu-miR-377144151U------------------------GUUUUCAACGGAAACACACUA ||::| ||| ||||||||AAAGAUUGGGAUAUGUGAGACCAGCCAGGAA-UGC--UUGUGUGAA
Klhl6mmu-miR-686326333----------------AGAAGUGG--CAGAC---CCUUCGUUA |:|||| : |||| ||||||||GUUUCAGACAGACCAGUUUUCAGUGGGUCUCUCAGGAAGCAAG
Klhl6mmu-miR-691322329--------------------AAAAG--ACGGAGAGAAGUCCUUA ||||| || |||| |||||||AGGAGUUUCAGACAGACCAGUUUUCAGUGGGUCUC-UCAGGAAG
Klhl6mmu-miR-705381388A--------------------CGG---GUGGGGUGGAGGGUGG ||| || : : ||||||||AAUAAAUCCAGGUCUUUCCACGCCAGUCAGUGUGUCUCCCACCA
Klhl6mmu-miR-761244251ACACAG---------------------UCAAAGUGGGACGACG :|| :: ||||||||CUUACCCAUUGUAAUUUACUUAACUAUGGUAAUGGCCUGCUGCC
Klhl6mmu-miR-98152159------------------UUGUUAUGUUGAA---UGAUGGAGU |: |||:| |||||||||GGAUAUGUGAGACCAGCCAGGAAUGCUUGUGUGAACUACCUCAG
Klhl6mmu-let-7a139159ugauauguuggaUGAUGGAGU |||||||||atgcttgtgtgaACTACCTCA
Klhl6mmu-let-7b131159UUGGUGUGU-UGGA------UGAUGGAGU|:||| : | :|:| |||||||||AGCCAGGAATGCTTGTGTGAACTACCTCA
Klhl6mmu-let-7c131159UUGGUAUGU-UGGA------UGAUGGAGU|:||| : | :|:| |||||||||AGCCAGGAATGCTTGTGTGAACTACCTCA
Klhl6mmu-let-7d142159ugAUACGUUGGAUGAUGGAGa |:||::| ||||||||ctTGTGTGA---ACTACCTCa
Klhl6mmu-let-7e139159ugauauguuggagGAUGGAGU ||||||||atgcttgtgtgaaCTACCTCA
Klhl6mmu-let-7f139159ugauauguuagaUGAUGGAGU |||||||||atgcttgtgtgaACTACCTCA
Klhl6mmu-let-7g142159ugACAUGUUUGAUGAUGGAGU |||:::| |||||||||ctTGTGTGA---ACTACCTCA
Klhl6mmu-let-7i129159uGUC-GUGUUU--GA-------UGAUGGAGU ||| || :|| || |||||||||cCAGCCAGGAATGCTTGTGTGAACTACCTCA
Klhl6mmu-miR-125a302328guGUCCAA--UUUCCC--AGAGUCCcu ||| || |: ||| |||||||acCAGTTTTCAGTGGGTCTCTCAGGaa
Klhl6mmu-miR-125b300328agUGUUCAA---U--CCC--AGAGUCCcu || |||| | ||| |||||||agACCAGTTTTCAGTGGGTCTCTCAGGaa
Klhl6mmu-miR-129-5p312336UCGUUC---GGGUCUGGCGUUUUUC||:::| |:|||: ||||:|||AGTGGGTCTCTCAGGAAGCAAGAAG
Klhl6mmu-miR-133a73101uguCGA---CCAACU--U-CCCC-UGGuu ||| |||| | | |||| |||tggGCTTAAGGTTCATCATGGGGCACCta
Klhl6mmu-miR-133b74101auCGA---CCAACU--U-CCCC-UGGuu ||| |||| | | |||| |||ggGCTTAAGGTTCATCATGGGGCACCta
Klhl6mmu-miR-134354376ggggAGACCAGU-UGGUCAGUgu ||| || :|||||||caggTCTTTCCACGCCAGTCAgt
Klhl6mmu-miR-135a401425AGUGUAUCCUUAUUU--UUCGGUau||| | ||||| | | ||||||TCAGAGAGGAAAACAGGAAGCCAac
Klhl6mmu-miR-141353380GGU--AGAAA----UGGUCUGUCACAau||| ||||| :|||| ||||||CCAGGTCTTTCCACGCCAGTCAGTGTgt
Klhl6mmu-miR-149117137CCU---CACUUCUGUGCCUCGGUCu||| ||| |||| | ||||||GGATATGTG-AGAC-C--AGCCAGg
Klhl6mmu-miR-151425453GGAGUU--------CCUCGGAGUCAGAUC|| ||| || |:||| ||||:|CCACAAATTCGGCTGGTGTCTCTGTCTGG
Klhl6mmu-miR-17-5p185213ugAUGGACG--UGACAU--UC-GUGAAac ||| ||| |||||: || |||||caTACATGCCTACTGTGCCAGACACTTac
Klhl6mmu-miR-184365389UGGGAAUAGUCA---AGAGGCAGGU|| | :||||| ||||| |||ACGCCAGTCAGTGTGTCTCCCACCA
Klhl6mmu-miR-188265286uGGGAGGUGGUACGUUCCCUac ||: :| : : | ||||||gCCTGTCTTAGAGGAAGGGAaa
Klhl6mmu-miR-196a133158GGUUGUU--GUAC---UUUGAUGGAu|||: || | || :||||||||CCAGGAATGCTTGTGTGAACTACCTc
Klhl6mmu-miR-196b129158GGUUGUUGUCCU-----------UUGAUGGAu|||:| ||||| ||||||||CCAGC--CAGGAATGCTTGTGTGAACTACCTc
Klhl6mmu-miR-199a*182201uuGGUUACACGU-CUGAUGACAu ||| | || | |||||||ttCCA---TACATGCCTACTGTg
Klhl6mmu-miR-200a355380UGUAGCAA----UGGUCUGUCACAau| :|| || :|||| ||||||AGGTCTTTCCACGCCAGTCAGTGTgt
Klhl6mmu-miR-200b357380CAG-UAGUAAUGGUCCGUCAUAau||| || :|||| ||||:|GTCTTTCCACGCCAGTCAGTGTgt
Klhl6mmu-miR-205148169gucUGA-GGCCACCUUACUUCCu ||| || || |||||||tgaACTACCTCAGG-ATGAAGGg
Klhl6mmu-miR-20b187213AUGGACG--UGAUAC--UC-GUGAAac||| ||| |||:|| || |||||TACATGCCTACTGTGCCAGACACTTac
Klhl6mmu-miR-21193120uCCGU--UUCCUACUGUUU----CCCUu |||| |||| |||||| ||||gGGCACCTAGGAAGACAAAGATTGGGAt
Klhl6mmu-miR-214232251gacggacagACACGGACGACa || ||||||||ctatggtaaTG-GCCTGCTGc
Klhl6mmu-miR-214248274GACGGACAGAC-----ACGGAC-GAca||||| | : | |||||| ||CTGCCAGATAGCATCATGCCTGTCTta
Klhl6mmu-miR-244561gaCAAGGACGACUUGACUCGGU |||||| || |||||||tcGTTCCT--TG---TGAGCCA
Klhl6mmu-miR-290435463uuuuuCACGGGGGUA------UCAAACuc |||:|:|::| ||||||ggctgGTGTCTCTGTCTGGCAAGTTTGct
Klhl6mmu-miR-29672100uguCCUAACUCC-------CCCCCG-GGA || || ||| ||||| |||ttgGGCTTAAGGTTCATCATGGGGCACCT
Klhl6mmu-miR-298230252ccuucuugucgggaGGA-GACGG ||| |||||aactatggtaatggCCTGCTGCC
Klhl6mmu-miR-29a423446UUG--GCUAAAGUCUACCAC-GAu||| | | |||:| ||||| ||AACCACAAATTCGGCTGGTGTCTc
Klhl6mmu-miR-31245268GUCGAUACGG----UCGUAGAACGGA| || |||| |||||| |||||CTGC--TGCCAGATAGCATCATGCCT
Klhl6mmu-miR-325935ugugaauGACUCGUGGAU----GAUCc ||||||||||| ||||ggagtctCTGAGCACCTATACCCTAGc
Klhl6mmu-miR-3317096aagAUCCUA--UCC--G-GGU-CCCCG |:|| | ||| | :|| |||||gctTGGGCTTAAGGTTCATCATGGGGC
Klhl6mmu-miR-34689109ucuCCGUCCGUGAGCCCGUCUGU || ||||| : || |||||catGG--GGCACCTAGGAAGACA
Klhl6mmu-miR-34b369398GUUAGUC-----GA--UUAAUGUGACGGAU||:|||| || | |:||||||||CAGTCAGTGTGTCTCCCACCATACTGCCTA
Klhl6mmu-miR-350105127aCUUUCACAUACCCGAAACACUu || | | |||| | |||||aGACAAAGATTGGGATATGTGAg
Klhl6mmu-miR-3517395guCCGAGUUUCCCGAGGAGU-CCCu ||||:|| ||:|| ||| |||tgGGCTTAA--GGTTCATCATGGGg
Klhl6mmu-miR-361122cAUGGGGACCUCUAAGACUauu ||||||||||| |||||cTACCCCTGGAGTCTCTGAgca
Klhl6mmu-miR-36292115aaguGUGGAUCC-AAGGUUCCUAA |||||||| ||| ||||ggggCACCTAGGAAGACAAAGATT
Klhl6mmu-miR-36578100uAUUCCUAAAAAU-CCCCGUaau ||||| | | | ||||||tTAAGGTTCATCATGGGGCAcct
Klhl6mmu-miR-370351377UUGGUCC---AAGGUGGGGUC-GUCcg| ||||| |||||| |||| |||ATCCAGGTCTTTCCACGCCAGTCAGtg
Klhl6mmu-miR-424226253aGGUUUUGUAC--UUA----ACGACGac |: || :||| ||| ||||||aCTTAACTATGGTAATGGCCTGCTGCca
Klhl6mmu-miR-433-3p7494uguGGCUCCUCGGGUAGUACua |: | | |::|||||||gggCTTAAG-GTTCATCATGgg
Klhl6mmu-miR-449231253UGGU-CGAUUGUUAUGUGACGGU||:| | |||::: ::||||||ACTATGGTAATGGCCTGCTGCCA
Klhl6mmu-miR-449b251268GGUCGAUCGUUACGUGACGGA|||| |||| || || |||||CCAGATAGC-AT-CA-TGCCT
Klhl6mmu-miR-455-3p374397UCACAUAUACG--GGCACCUGACGua|||||:| | | || | |||||AGTGTGTCTCCCACCAT--ACTGCct
Klhl6mmu-miR-4645577auagaGUGUCUUAUUUGAACCau ||:||: | ::|||||tgagcCATAGGCTTGGCTTGGgc
Klhl6mmu-miR-467*189213GUAU--AUG-UAC-GUCCGUGAAUG|||: ||| :|| ||| |||||||CATGCCTACTGTGCCAGACACTTAC
Klhl6mmu-miR-4697497CCUGUGGUUCUAGUUACUUUCUCCGU||:| ::|||:|: || | |:||||GGGC-TTAAGGTTCAT-CATGGGGCA
Klhl6mmu-miR-470258277aGUGGUCACGGUCAGGUUCUu ||:|| |||| |||: |||gCATCA-TGCCTGTCTTAGAg
Klhl6mmu-miR-483271294uguUCUGCCCUCCC--CUCCUCAcu ||| || |||| ||||||cttAGA-GGAAGGGAAAAGGAGTtt
Klhl6mmu-miR-490327360gUCGUACCUC-A---GG--------AGGUCCAac |||| | || | || |||||||aAGCAAGAAGCTAAGCCAAAATAAATCCAGGTct
Klhl6mmu-miR-503234253cguCAUGACAAGGGCGACGau ||| || ||:|||||atgGTAATG-GCCTGCTGCca
Klhl6mmu-miR-546375390cugaggcacGGUGGUA |||||||gtgtgtctcCCACCAT
Klhl6mmu-miR-551b295320GUGACUUUGGUUCA----UACCCAGc|| |:||||: | :||||||CAGACAGACCAGTTTTCAGTGGGTCt
Klhl6mmu-miR-6523963acGUGUUG---GGAUCACCGCGGUAa |||: | ||| || | |||||ccCACGTCGTTCCTTGT-GAGCCATa
Klhl6mmu-miR-6662244ccGAGA--GUGUCGACACGGGCGa || | | :|||| ||||| |acCTATACCCTAGCT-TGCCCACg
Klhl6mmu-miR-6676687GAACCCGACCCACCGUCCACAGU||||| :|||| |||| |||CTTGGCTTGGGCTTAAGGT-TCA
Klhl6mmu-miR-670383408aaGUGGUGU-AUG---UGAGUCCCUa |||||:| |:| |:|||| ||ccCACCATACTGCCTAATTCAGAGAg
Klhl6mmu-miR-674257278auGUGGUGAGGGUAGAGUCACg ||:||: ||::|||:|| |agCATCATGCCTGTCTTAGAGg
Klhl6mmu-miR-676145165ucgAGUUGUUGGAGUCCUGCc | ||| |||||||||:|gtgTGAACTACCTCAGGATGa
Klhl6mmu-miR-679352374uGGUUCUCAGUGGAGU-GUCAGg |||:| |: || |: |||||tCCAGGTCTTTCCACGCCAGTCa
Klhl6mmu-miR-684267289aACUGAA----CUUCCCUUUUga || ||| ||||||||||cTGTCTTAGAGGAAGGGAAAAgg
Klhl6mmu-miR-685199220CACGGAGUG-GAGUCGGUAACu||||| || ||:| ||||||GTGCCAGACACTTACCCATTGt
Klhl6mmu-miR-686307333AGAAGUGGC----AGA-CCCUUCGUUa|:|||| :| ||| ||||||||TTTTCAGTGGGTCTCTCAGGAAGCAAg
Klhl6mmu-miR-688230250cUUAU-UCAUCAGCGGACGcu | || :||| | ||||||aACTATGGTAATGGCCTGCtg
Klhl6mmu-miR-691307329AAAAG--ACGGAGAGAAGUCCUUa||||| || |||| |||||||TTTTCAGTGGGTCTC-TCAGGAAg
Klhl6mmu-miR-6962945GGGUGUCGUUCGUGUGCg||| :||| || ||||CCC-TAGCTTGCCCACGt
Klhl6mmu-miR-697149166agaGGUGUCCUGGUCCUACaa |:|| :|||||||gaaCTAC---CTCAGGATGaa
Klhl6mmu-miR-699247268gcuCGGUCCAGCGU-G-ACGGA ||||| | ||| | |||||gctGCCAGATAGCATCATGCCT
Klhl6mmu-miR-7363386GUUGU-UUUAGUGAU-CAGAAGGU| ||: |:||| |: |||| |||CCACGCCAGTCAGTGTGTCTCCCA
Klhl6mmu-miR-7025278cuCGCCCCAUUUC----CC--ACCCGu |:| | | || || |||||ttGTGAGCCATAGGCTTGGCTTGGGCt
Klhl6mmu-miR-705360388ACGGGUGGGGU---------GGAGGGUGG| :|||| ||| :||||||||TTTCCACGCCAGTCAGTGTGTCTCCCACC
Klhl6mmu-miR-709236255aggaggaCGGA-GACGGagg |||| |||||ggtaatgGCCTGCTGCCaga
Klhl6mmu-miR-711300321gaauGUAGAGAGGGGCCCAGGG || :|:|| :|||||:|agacCAGTTTTCAGTGGGTCTC
Klhl6mmu-miR-717433454ucucuuCCAUAGAGACAGACuc |||:||||||||||tcggctGGTGTCTCTGTCTGgc
Klhl6mmu-miR-741304324gauguaucUUACCGUAGAGAGU |:||| :|||||||cagttttcAGTGG-GTCTCTCA
Klhl6mmu-miR-743428447agaUGAGUCGAACCACAGAaa |:||:|| ||||||||caaATTCGGC-TGGTGTCTct
Klhl6mmu-miR-761230251acacaguCAAAGUGGGACGACG || :: ||||||||aactatgGTAATGGCCTGCTGC
Klhl6mmu-miR-764-5p113130uccuCCUGUACACUCGUGG |||:||||||| |||attgGGATATGTGAG-ACC
Klhl6mmu-miR-7b345364UUGUUUUAGUGUUCAGAAGGu|| ||||| ||:|||||:|AAATAAATC-CAGGTCTTTCc
Klhl6mmu-miR-98132159uuGUUAUGUUGAA------UGAUGGAGU ||: | :||| |||||||||gcCAGGAATGCTTGTGTGAACTACCTCA
DNA & RNA Element - RAID2
Gene NameRAID IDInteractor 1Category 1ID 1Interactor 2Category 2ID 2MethodsScore
Klhl6RAID00111403mmu-let-7i-5pmiRNAMIMAT0000122Klhl6mRNA239743CLIP-seq//Prediction0.6559
Klhl6RAID00196509mmu-miR-539-5pmiRNAMIMAT0003169Klhl6mRNA239743Prediction0.1828
Klhl6RAID00366359mmu-miR-206-3pmiRNAMIMAT0000239Klhl6mRNA239743CLIP-seq//Prediction0.6308
Klhl6RAID00431839mmu-miR-142a-3pmiRNAMIMAT0000155Klhl6mRNA239743CLIP-seq//Prediction0.6308
Klhl6RAID00654152mmu-miR-761miRNAMIMAT0003893Klhl6mRNA239743Prediction0.2202
Klhl6RAID00748445mmu-miR-202-3pmiRNAMIMAT0000235Klhl6mRNA239743CLIP-seq0.5483
Klhl6RAID00786359mmu-miR-664-5pmiRNAMIMAT0017353Klhl6mRNA239743Prediction0.1828
Klhl6RAID00874275mmu-miR-149-5pmiRNAMIMAT0000159Klhl6mRNA239743CLIP-seq//Prediction0.6308
Klhl6RAID00877688mmu-let-7f-5pmiRNAMIMAT0000525Klhl6mRNA239743CLIP-seq//Prediction0.6559
Klhl6RAID00927640mmu-let-7g-5pmiRNAMIMAT0000121Klhl6mRNA239743CLIP-seq//Prediction0.6559
Klhl6RAID01391280mmu-miR-214-3pmiRNAMIMAT0000661Klhl6mRNA239743Prediction0.2202
Klhl6RAID01444551mmu-miR-299a-3pmiRNAMIMAT0004577Klhl6mRNA239743Prediction0.1828
Klhl6RAID01487090mmu-miR-1961miRNAMIMAT0009434Klhl6mRNA239743CLIP-seq//Prediction0.6478
Klhl6RAID01521909mmu-miR-377-3pmiRNAMIMAT0000741Klhl6mRNA239743CLIP-seq//Prediction0.6478
Klhl6RAID01694566mmu-miR-7578miRNAMIMAT0029578Klhl6mRNA239743Prediction0.1828
Klhl6RAID01710286mmu-miR-196a-5pmiRNAMIMAT0000518Klhl6mRNA239743CLIP-seq//Prediction0.6308
Klhl6RAID01724389mmu-miR-129b-3pmiRNAMIMAT0029863Klhl6mRNA239743Prediction0.1828
Klhl6RAID01925538mmu-let-7b-5pmiRNAMIMAT0000522Klhl6mRNA239743CLIP-seq//Prediction0.6559
Klhl6RAID01973411mmu-miR-6417miRNAMIMAT0025172Klhl6mRNA239743Prediction0.1828
Klhl6RAID02020694mmu-miR-3620-3pmiRNAMIMAT0029879Klhl6mRNA239743Prediction0.1828
Klhl6RAID02094761mmu-miR-9769-5pmiRNAMIMAT0036461Klhl6mRNA239743Prediction0.1828
Klhl6RAID02167313mmu-miR-196b-5pmiRNAMIMAT0001081Klhl6mRNA239743CLIP-seq//Prediction0.6308
Klhl6RAID02191359mmu-let-7d-5pmiRNAMIMAT0000383Klhl6mRNA239743CLIP-seq//Prediction0.6559
Klhl6RAID02218428mmu-miR-135a-5pmiRNAMIMAT0000147Klhl6mRNA239743Prediction0.1828
Klhl6RAID02228056mmu-miR-871-3pmiRNAMIMAT0017265Klhl6mRNA239743Prediction0.1828
Klhl6RAID02325731mmu-miR-6913-5pmiRNAMIMAT0027726Klhl6mRNA239743Prediction0.1828
Klhl6RAID02415041mmu-miR-1943-3pmiRNAMIMAT0017342Klhl6mRNA239743Prediction0.1828
Klhl6RAID02550974mmu-miR-135b-5pmiRNAMIMAT0000612Klhl6mRNA239743Prediction0.1828
Klhl6RAID02797503mmu-miR-3113-5pmiRNAMIMAT0014959Klhl6mRNA239743Prediction0.1828
Klhl6RAID02966635mmu-miR-1a-3pmiRNAMIMAT0000123Klhl6mRNA239743CLIP-seq//Prediction0.6308
Klhl6RAID03010316mmu-miR-384-3pmiRNAMIMAT0001076Klhl6mRNA239743Prediction0.1828
Klhl6RAID03016062mmu-let-7e-5pmiRNAMIMAT0000524Klhl6mRNA239743CLIP-seq//Prediction0.6559
Klhl6RAID03022583mmu-miR-145a-3pmiRNAMIMAT0004534Klhl6mRNA239743Prediction0.1828
Klhl6RAID03123874mmu-miR-98-5pmiRNAMIMAT0000545Klhl6mRNA239743CLIP-seq//Prediction0.6592
Klhl6RAID03285486mmu-let-7kmiRNAMIMAT0025580Klhl6mRNA239743Prediction0.1828
Klhl6RAID03408390mmu-miR-205-5pmiRNAMIMAT0000238Klhl6mRNA239743CLIP-seq//Prediction0.6308
Klhl6RAID03430149mmu-miR-7031-5pmiRNAMIMAT0027966Klhl6mRNA239743Prediction0.1828
Klhl6RAID03874743mmu-let-7c-5pmiRNAMIMAT0000523Klhl6mRNA239743CLIP-seq//Prediction0.6559
Klhl6RAID04059818mmu-let-7a-5pmiRNAMIMAT0000521Klhl6mRNA239743CLIP-seq//Prediction0.6559