DNA & RNA Element - RepTar |
Gene Name | miRNA | Begin | End | Profile |
Usp17 | mghv-miR-M1-9 | beg:411 | end:426 | pic:3' TTTTTCCAGGTCCGTTTACACT 5'& |||| ||||||| &5' --------CCAGA-AAATGTG- 3' |
Usp17 | mmu-miR-669g | beg:116 | end:133 | pic:3' TAGTACAGTTGTGTATGTTACGT 5'& ..|| . ||||||| &5' --------GGCAGGGACAATGC- 3' |
Usp17 | mmu-miR-199bstar | beg:69 | end:79 | pic:3' CTTGTCCATCAGATTTGTGACCC 5'& ||||||| &5' ---------------ACACTGG- 3' |
Usp17 | mmu-miR-18astar | beg:15 | end:34 | pic:3' GTCTTCCTCGTGAA-TCCCGTCA 5'& || || ||||||| &5' ------GAACAAACAAGGGCAG- 3' |
Usp17 | mghv-miR-M1-7-5p | beg:141 | end:160 | pic:3' TCCAATGGCG-TGGAGGTGGAAA 5'& ||. .| ||||||||| &5' -------CGTGGCGTCCACCTTT 3' |
Usp17 | mmu-miR-1955 | beg:90 | end:109 | pic:3' TTTTCGACGTCACGTAGGACCCTGA 5'& |||. || |||||||| &5' -----CTGT--TGAC-CCTGGGAC- 3' |
Usp17 | mmu-miR-1953 | beg:403 | end:417 | pic:3' GTCTTCGGACTCTTGAAAGGGT 5'& ||| |||||||| &5' ------CCT-----CTTTCCCA 3' |
Usp17 | mmu-miR-1958 | beg:145 | end:163 | pic:3' TGAATGACGAAGGT-GAAAGGAT 5'& || |||| ||||||| &5' -------GCGTCCACCTTTCCT- 3' |
Usp17 | mmu-miR-22star | beg:0 | end:16 | pic:3' ATTTCGAACGGTGACTTCTTGA 5'& | . ||||||| &5' --------GAAGGGGAAGAAC- 3' |
Usp17 | mmu-miR-668 | beg:174 | end:193 | pic:3' CCATCACCCGGCT-CGGCTCACTGT 5'& |.| ||.||||||| &5' --------GTCTTTGCTGAGTGAC- 3' |
Usp17 | mmu-miR-31star | beg:272 | end:291 | pic:3' CTACCGTTATACAACCGTATCGT 5'& || .| || ||||||| &5' ---GGGGAG--GTCTGCATAGC- 3' |
Usp17 | mmu-miR-335-5p | beg:343 | end:354 | pic:3' TGTAAAAAGCAATAACGAGAACT 5'& |||||||| &5' ---------------GCTCTTGA 3' |
Usp17 | mmu-miR-486 | beg:230 | end:248 | pic:3' GAGCCCCGTCGAGTCATGTCCT 5'& |||. |.| .||||||| &5' ----GGGT-GTT-GGTACAGG- 3' |
Usp17 | mcmv-miR-m01-1 | beg:144 | end:165 | pic:3' GGCAAGCTGCAATA--AGAGGAGA 5'& .|.||| |.|||||| &5' -----TGGCGTCCACCTTTCCTCT 3' |
Usp17 | mcmv-miR-m107-1-5p | beg:174 | end:194 | pic:3' CCACTGAGCTCTGCTCACTGGC 5'& || ||. | .|||||||. &5' --TGTCTTT-GCTGAGTGACT- 3' |
Usp17 | mcmv-miR-m59-1 | beg:81 | end:100 | pic:3' GACTGCCAGCTCCGTGACGATT 5'& || || |||||.|.| &5' ------GTGGACACACTGTTGA 3' |
Usp17 | mghv-miR-M1-8 | beg:216 | end:240 | pic:3' CTGGTTTGG-GGGTCACTCACGA 5'& ||. |||.. ||||| | |||.| &5' GATAAAATTGCCCAG-G-GTGTT 3' |
Usp17 | mmu-let-7g | beg:119 | end:137 | pic:3' TTGACATGTTTGATGATGGAGT 5'& | | ..|| |.||||| &5' ----GCAGGGACAA-TGCCTCA 3' |
Usp17 | mmu-miR-10a | beg:303 | end:324 | pic:3' GTGTTTAAGCCTAGA--TGTCCCAT 5'& |.| |||| .||||||| &5' -------TTGAATCTGAGCAGGGTA 3' |
Usp17 | mmu-miR-10b | beg:303 | end:324 | pic:3' GTGTTTAAGCCAAGA--TGTCCCAT 5'& |.| ||| .||||||| &5' -------TTGAATCTGAGCAGGGTA 3' |
Usp17 | mmu-miR-125a-3p | beg:74 | end:95 | pic:3' CCGAGGGTTCTTGGAGTGGACA 5'& ||||||.. |.|| |||. &5' GGCTCCTGTGGACA-CACT--- 3' |
Usp17 | mmu-miR-139-5p | beg:421 | end:442 | pic:3' GACCTCTGTGCACGTGACATCT 5'& || || .|| ||||||||| &5' -TGTAG-TACA--CACTGTAGA 3' |
Usp17 | mmu-miR-146a | beg:461 | end:482 | pic:3' TTGGGTAC-CTTAA-GTCAAGAGT 5'& .|| || |||||||. &5' -----GTGTGATCAACAGTTCTT- 3' |
Usp17 | mmu-miR-146b | beg:460 | end:482 | pic:3' TCGGATACCTTAAGTCAAGAGT 5'& |. |.|| |||||||. &5' -GTGTGTGATCAACAGTTCTT- 3' |
Usp17 | mmu-miR-146bstar | beg:258 | end:277 | pic:3' TGGTCTTGACTCAGGGATCCCG 5'& |.|||. |||.||| &5' -----AGCTGGAAACCTGGGG- 3' |
Usp17 | mmu-miR-17star | beg:420 | end:441 | pic:3' GATGTTCACGG---GAGTGACGTCA 5'& |||. | |||||.|| &5' ------GTGTAGTACACACTGTAG- 3' |
Usp17 | mmu-miR-184 | beg:96 | end:117 | pic:3' TGGGAATAGTCAAGAGGCAGGT 5'& ||||| .| |||.|||| &5' ACCCTG---GGACCTCTGTCC- 3' |
Usp17 | mmu-miR-1894-5p | beg:262 | end:281 | pic:3' TCTCCGTCCACCATCCCCTCTC 5'& || |.||||||. &5' ---GGAAACC--TGGGGGAGG- 3' |
Usp17 | mmu-miR-1898 | beg:467 | end:487 | pic:3' CTAGGGGACACTTGGAACTGGA 5'& |||| | || |.|||||| &5' GATCAACAGTT--CTTTGACC- 3' |
Usp17 | mmu-miR-18astar | beg:311 | end:325 | pic:3' GTCTTCCTCGTGAATCCCGTCA 5'& |||| ||||.|| &5' ------GAGC----AGGGTAG- 3' |
Usp17 | mmu-miR-1937c | beg:155 | end:169 | pic:3' ACCCCCGAGAAGGCCCTA 5'& .|| ||.|||| &5' ------TTCCTCTGGGA- 3' |
Usp17 | mmu-miR-1962 | beg:277 | end:295 | pic:3' TACACAGGGTCACG-GTCGGAGA 5'& ||| ||| .||||||| &5' ----GTC----TGCATAGCCTCT 3' |
Usp17 | mmu-miR-1982star | beg:399 | end:418 | pic:3' GGAGGGGTCCTGGGAGGGTT 5'& || || |..|||||. &5' -CTAACCT---CTTTCCCAG 3' |
Usp17 | mmu-miR-201 | beg:169 | end:191 | pic:3' TTCTTGTTACGGA-----ATGACTCAT 5'& ||||| |.||||||. &5' --------TGCCTGTCTTTGCTGAGTG 3' |
Usp17 | mmu-miR-207 | beg:0 | end:13 | pic:3' CTCCCTCCTCTCGGTCCTCTTCG 5'& || |||.|||| &5' ----------AGA-AGGGGAAG- 3' |
Usp17 | mmu-miR-20bstar | beg:420 | end:441 | pic:3' GATCTTCACGA---GTGTGACGTCA 5'& |||. |||||||.|| &5' ------GTGTAGTACACACTGTAG- 3' |
Usp17 | mmu-miR-2135 | beg:26 | end:42 | pic:3' CAAAGCCGGGGTTCTGGAGA 5'& ||| .||.|.||| &5' -----GGCA--GAGGCTTCT 3' |
Usp17 | mmu-miR-2135 | beg:93 | end:113 | pic:3' CAAAGCCGGGGTTCTGGAGA 5'& |.| ||| .||||||| &5' ---TTGACCCTGGGACCTCT 3' |
Usp17 | mmu-miR-2136 | beg:54 | end:69 | pic:3' GTGTAGAGTCAGTTGTGGGTC 5'& |||| |||||| &5' -----CTCACC---CACCCA- 3' |
Usp17 | mmu-miR-215 | beg:230 | end:251 | pic:3' CAGACAGTTTAGTATCCAGTA 5'& | ||| . ||||.| &5' GGGTGTTGGTAC--AGGTTA- 3' |
Usp17 | mmu-miR-30astar | beg:181 | end:202 | pic:3' CGACGT-TTGTAGGCTGACTTTC 5'& |||| .|| ||. ||||.| &5' GCTGAGTGAC-TCT--CTGAGA- 3' |
Usp17 | mmu-miR-30c-1star | beg:395 | end:418 | pic:3' CCTCATTTGTTGG-GAGAGGGTC 5'& || .|||| ||.|||||| &5' ---GTTTCTAACCTCTTTCCCAG 3' |
Usp17 | mmu-miR-30c-2star | beg:352 | end:374 | pic:3' TCTCATTTGTCGGAAGAGGGTC 5'& || | ||..|||||.||| &5' ---GTTTAGAGTTTTCTCTCAG 3' |
Usp17 | mmu-miR-30c-2star | beg:395 | end:418 | pic:3' TCTCATTTGTCGGA-AGAGGGTC 5'& || ||| |.|||||| &5' ---GTTTCTAACCTCTTTCCCAG 3' |
Usp17 | mmu-miR-30estar | beg:181 | end:202 | pic:3' CGACAT-TTGTAGGCTGACTTTC 5'& |||| .|| ||. ||||.| &5' GCTGAGTGAC-TCT--CTGAGA- 3' |
Usp17 | mmu-miR-32 | beg:417 | end:431 | pic:3' ACGTTGAATCATTACACGTTAT 5'& ||||||.|.|| &5' -----------AATGTGTAGTA 3' |
Usp17 | mmu-miR-326 | beg:215 | end:236 | pic:3' TGACCTCCTTCC-CGGGTCTCC 5'& |||| ||||||.| &5' --TGGATAAAATTGCCCAGGG- 3' |
Usp17 | mmu-miR-330 | beg:215 | end:236 | pic:3' CGGATTCTGTGTC--CGGGTCTCT 5'& .||.| ||||||.| &5' -----GGATAAAATTGCCCAGGG- 3' |
Usp17 | mmu-miR-338-3p | beg:372 | end:390 | pic:3' GTTGTTTTAGTGACTACGACCT 5'& ||||||. ||||||| &5' CAACAAGT-------TGCTGGA 3' |
Usp17 | mmu-miR-338-3p | beg:221 | end:242 | pic:3' GTTGTTTTAGTGA---CTACGACCT 5'& ||||| | |.||.||| &5' ----AAAATTGCCCAGGGTGTTGG- 3' |
Usp17 | mmu-miR-339-3p | beg:39 | end:61 | pic:3' GCCGAGACAGCGGCTCCGCGAGT 5'& |||. |.||. |.||||| &5' --GCTTGTTTGCTA--GTGCTCA 3' |
Usp17 | mmu-miR-340-5p | beg:448 | end:465 | pic:3' TTAGTCAGAGTAACGAAATATT 5'& |||.||| ||||.|. &5' ------TCTTATT-CTTTGTG- 3' |
Usp17 | mmu-miR-375 | beg:4 | end:25 | pic:3' AGTGCGCTCGGCTTG--CTTGTTT 5'& |.| |||| ||||||| &5' ------GGGAAGAACAAGAACAAA 3' |
Usp17 | mmu-miR-380-5p | beg:359 | end:377 | pic:3' GCGTACAAGATACCAGTTGGTA 5'& |||.| |||.||| &5' -----GTTTTCTC-TCAGCCA- 3' |
Usp17 | mmu-miR-384-5p | beg:33 | end:52 | pic:3' TGTAACGGATCCTTAACAAATGT 5'& ||.| ||||||.| &5' -----GCTTCTGC-TTGTTTGC- 3' |
Usp17 | mmu-miR-433 | beg:334 | end:355 | pic:3' TGTG-GCTCCTCGGGTAGTACTA 5'& ||| || |||||.| |||| &5' -CACACG-GGAGCTCT---TGAT 3' |
Usp17 | mmu-miR-485 | beg:277 | end:295 | pic:3' CTTAAGTAGTGCCG-GTCGGAGA 5'& .|| || .||||||| &5' ------GTCT--GCATAGCCTCT 3' |
Usp17 | mmu-miR-582-3p | beg:457 | end:477 | pic:3' AACCCAAGTCAACAAGTTGTCC 5'& ||| || || ||||||| &5' TTGTGTG----TGATCAACAG- 3' |
Usp17 | mmu-miR-615-5p | beg:93 | end:113 | pic:3' CTAGGCTCGTGGCCCCTGGGGG 5'& ..|| | || ||||||.|. &5' ---TTGA-C-CCTGGGACCTCT 3' |
Usp17 | mmu-miR-666-5p | beg:158 | end:179 | pic:3' CCGAGAGTGTCGACACGGGCGA 5'& |||| . | || ||||.|. &5' --CTCTGGGACCT-TGCCTGT- 3' |
Usp17 | mmu-miR-676 | beg:258 | end:277 | pic:3' TCGAGTTGTTGGAGTCCTGCC 5'& |||| .| ||||| .||. &5' AGCTGGA-AACCTGGGGG--- 3' |
Usp17 | mmu-miR-676star | beg:433 | end:443 | pic:3' CGTTCAGGATTCCAACATCTCA 5'& ||||||| &5' --------------TGTAGAG- 3' |
Usp17 | mmu-miR-698 | beg:3 | end:21 | pic:3' TCCCTTCCTTTGCTCTTAC 5'& .|||||| ||| |||| &5' GGGGAAG--AACAAGAA-- 3' |
Usp17 | mmu-miR-705 | beg:52 | end:74 | pic:3' ACGGGTGGGGTGGAGGGTGG 5'& |||.||||| || ||||| &5' TGCTCACCCACCCACCCAC- 3' |
Usp17 | mmu-miR-708 | beg:62 | end:84 | pic:3' GGGTCGATCTAACATTCGAGGAA 5'& |||| .|||||| &5' CCCACCCACACT---GGCTCCT- 3' |
Usp17 | mmu-miR-741 | beg:355 | end:373 | pic:3' AGATGTATCTTACCGTAGAGAGT 5'& ||||.| ||||||| &5' ------TAGAGTTT--TCTCTCA 3' |
Usp17 | mmu-miR-877 | beg:145 | end:166 | pic:3' GGGACGC-GGT--AGAGGAGATG 5'& ||| ||| |.||||||. &5' ----GCGTCCACCTTTCCTCTG- 3' |
Usp17 | mmu-miR-883a-5p | beg:357 | end:375 | pic:3' CATTGACGATGAAGAGAGTCGT 5'& | .|||||||||| &5' ------GAGTTTTCTCTCAGC- 3' |