DNA & RNA Element - AREsite Gene Name Motif CDS Area ARE Area Evidence Trim56 ATTTA 253-2457 2783-2787

DNA & RNA Element - miRTarBase Target Gene (Entrez ID) miRTarBase ID miRNA Species (miRNA) Target Gene Species (Target Gene) Experiments Support Type References (PMID) MIRT600226 mmu-miR-291a-3p Mus musculus Trim56 384309 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322 MIRT600224 mmu-miR-294-3p Mus musculus Trim56 384309 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322 MIRT600227 mmu-miR-295-3p Mus musculus Trim56 384309 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322 MIRT600228 mmu-miR-302a-3p Mus musculus Trim56 384309 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322 MIRT600229 mmu-miR-302b-3p Mus musculus Trim56 384309 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322 MIRT600225 mmu-miR-302d-3p Mus musculus Trim56 384309 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322 MIRT600222 mmu-miR-693-3p Mus musculus Trim56 384309 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322 MIRT600223 mmu-miR-105 Mus musculus Trim56 384309 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322 MIRT600230 mmu-miR-1186a Mus musculus Trim56 384309 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004519 mmu-let-7g* 384309 Trim56 cguuccgucACCGGACAUGUCa || ||||||| uguuccuuuUGUGAUGUACAGg 2 14 134 155 [mm9:5:137588135-137588156:-] 0.5762 141 7 -12.15 -0.3854 MIMAT0004523 mmu-miR-29b* 384309 Trim56 auUUGGUGGUAUACUUU-GGUCg |: :|: | || ||| |||| ggAGGUAUGAGAUCAAAUCCAGa 2 21 1008 1030 [mm9:5:137587260-137587282:-] 0.5001 120 0 -11.17 -0.3013 MIMAT0000217 mmu-miR-188-5p 384309 Trim56 ggGAGGUGGUACGU-UCCCUAc :|:::: |||:| |||||| ccUUUUGUGAUGUACAGGGAUa 2 20 138 159 [mm9:5:137588131-137588152:-] 0.5762 127 6 -19.82 -0.8021 MIMAT0004547 mmu-miR-203* 384309 Trim56 acaacUUGACAGUUCUUG-GUGa | :|| | ||||| ||| aaagcACUUGCCUAGAACUCACc 2 18 359 381 [mm9:5:137587909-137587931:-] 0.5000 121 0 -11.05 -0.3168 MIMAT0004573 mmu-miR-293* 384309 Trim56 guUUUACAGUGUGUCAAACUCa :|: |:|:|: ||||||| agGAGGAUUAUAU-GUUUGAGc 2 21 1088 1108 [mm9:5:137587182-137587202:-] 0.5000 150 7 -14.38 -0.1979 MIMAT0004573 mmu-miR-293* 384309 Trim56 guuuuACAGUGUGUC-AAACUCa || || |:|| |||||| uuggcUGGCA-AUAGCUUUGAGc 2 18 179 200 [mm9:5:137588090-137588111:-] 0.5762 123 6 -10.47 -0.1175 MIMAT0004574 mmu-miR-294* 384309 Trim56 ucuaucccggagGUAAAACUCa ::||||||| uguaguuuuaggUGUUUUGAGa 2 11 269 290 [mm9:5:137588000-137588021:-] 0.5762 142 7 -10.41 -0.5267 MIMAT0004583 mmu-miR-130b* 384309 Trim56 ucaucACGUUGUCC-CUUUCUCa || |:|||| ||||||| aaccuUGGAGCAGGUGAAAGAGa 2 18 745 767 [mm9:5:137587523-137587545:-] 0.5001 164 7 -21.94 -0.6312 MIMAT0004634 mmu-miR-31* 384309 Trim56 cuacCGUUAUA--CAACCG-UAUCGu |:|:|:| | |||| ||||| aagaGUAGUGUUGGCUGGCAAUAGCu 2 20 169 194 [mm9:5:137588096-137588121:-] 0.5762 126 0 -18.60 -0.2864 MIMAT0000569 mmu-miR-330* 384309 Trim56 agagacguccggGAC--ACGAAACg ||| ||||||| cagucaaccaaaCUGCUUGCUUUGg 2 12 217 241 [mm9:5:137588049-137588073:-] 0.5762 142 7 -14.54 -0.3161 MIMAT0000595 mmu-miR-345-5p 384309 Trim56 uucGUGACCUGAU-CCCCAGUCg || || | || |||||||| ccuCAAUGAAGUAUGGGGUCAGa 2 20 949 971 [mm9:5:137587319-137587341:-] 0.5001 162 7 -20.51 -0.3070 MIMAT0000595 mmu-miR-345-5p 384309 Trim56 uucguGACCUGAUCCCCAGUCg ||||: | |||||||| cauucCUGGGAU-GGGGUCAGg 2 18 328 348 [mm9:5:137587942-137587962:-] 0.5381 159 7 -27.05 -0.1019 MIMAT0000595 mmu-miR-345-5p 384309 Trim56 uucGUGACCUGAUCCCCAGUCg || || | ||||||||| gguCAGAGGUC-AGGGGUCAGa 2 20 965 985 [mm9:5:137587305-137587325:-] 0.5001 157 7 -23.56 -0.2359 MIMAT0000595 mmu-miR-345-5p 384309 Trim56 uucgugaCCUGAUCCCCAGUCg | || |||||||| ucaagggGAACAUGGGGUCAGa 2 16 870 891 [mm9:5:137587399-137587420:-] 0.5112 151 7 -25.36 -0.1334 MIMAT0000605 mmu-miR-350 384309 Trim56 cuUUCAC--AUACCCGAAACACUu || || |:| :||||||| caAAAUGCUUGUUCCUUUUGUGAu 2 21 125 148 [mm9:5:137588142-137588165:-] 0.5762 147 7 -8.39 -0.6393 MIMAT0005444 mmu-miR-218-2* 384309 Trim56 gcgcCACGAACUGUCUUGGUAc || :| ||||||||| auuuGUAUUCUUCAGAACCAUu 2 19 310 331 [mm9:5:137587959-137587980:-] 0.5762 154 7 -14.15 -0.4364 MIMAT0000744 mmu-miR-380-5p 384309 Trim56 gcguacaagauacCAGUUGGUa |||||||| gcagaugccagcaGUCAACCAa 2 10 206 227 [mm9:5:137588063-137588084:-] 0.5762 145 7 -12.85 -0.3256 MIMAT0001094 mmu-miR-412 384309 Trim56 gccgaucACCUGGUCCACUu |||| ||||||| aaaaccuUGGAGCAGGUGAa 2 14 743 762 [mm9:5:137587528-137587547:-] 0.5001 157 7 -20.85 -0.5012 MIMAT0003120 mmu-miR-483* 384309 Trim56 uuCUGCCCUCCCC--UC-CUCACu || | ||||| || ||||| caGAGGUCAGGGGUCAGAGAGUGc 2 20 968 991 [mm9:5:137587299-137587322:-] 0.5001 122 0 -22.05 -0.1201 MIMAT0004789 mmu-miR-450a-3p 384309 Trim56 uacUUACGUUUCGUAGG-GGUUa || :||: ||||| |||| gauAACAUAAGUCAUCCUCCAAg 2 20 779 801 [mm9:5:137587489-137587511:-] 0.5003 127 0 -15.30 -0.5906 MIMAT0003376 mmu-miR-302c 384309 Trim56 ggugacuuuguaccUUCGUGAa ||||||| aggacuccucuguaAAGCACUu 2 9 346 367 [mm9:5:137587923-137587944:-] 0.5000 140 7 -14.33 -0.2044 MIMAT0003376 mmu-miR-302c 384309 Trim56 ggUGACUUUGUACCUUCG-UGAa || |::|:| ||||| ||| guACAGGGAUA--GAAGCUACUa 2 21 149 169 [mm9:5:137588121-137588141:-] 0.5762 121 0 -13.23 -0.5562 MIMAT0003894 mmu-miR-764-5p 384309 Trim56 uccuccuguACACUCGUGg | ||||||| ggcaauagcUUUGAGCACa 2 11 185 203 [mm9:5:137588087-137588105:-] 0.5762 142 7 -11.56 -0.6184 MIMAT0004823 mmu-miR-666-3p 384309 Trim56 ucguccgCUAGU--GCGACGUCGg || || : ||||||| ugcuuugGAACAAUUCCUGCAGCu 2 16 234 257 [mm9:5:137588033-137588056:-] 0.5762 142 7 -16.18 -0.3362 MIMAT0003898 mmu-miR-760 384309 Trim56 aggggUGUCUGGGUCUCGGc |:||| ||||||| gcauaAUAGAAGCAGAGCCa 2 16 66 85 [mm9:5:137588205-137588224:-] 0.4899 155 7 -20.09 -0.2906 MIMAT0003457 mmu-miR-680 384309 Trim56 ggggguacaGUCGUCUACGGg ||||||||||| uugagcacaCAGCAGAUGCCa 2 13 195 215 [mm9:5:137588075-137588095:-] 0.5762 160 7 -23.18 -0.5398 MIMAT0003457 mmu-miR-680 384309 Trim56 ggGGGUACAGUCGUCU-ACGGg |:|| || ||:||| |||| gaCUCA-GU-AGUAGAGUGCCu 2 20 389 408 [mm9:5:137587882-137587901:-] 0.5000 123 0 -21.52 -0.1350 MIMAT0003461 mmu-miR-683 384309 Trim56 cuccugugUCGAAUGUCGUCc ||| ||||||| uagcuuugAGCACACAGCAGa 2 14 190 210 [mm9:5:137588080-137588100:-] 0.5762 149 7 -14.29 -0.3574 MIMAT0003462 mmu-miR-684 384309 Trim56 aacugaacuuccCUUUUGa |||||| uaaaaaacaaaaGAAAACa 2 8 720 738 [mm9:5:137587552-137587570:-] 0.5000 120 6 -4.04 -0.1441 MIMAT0003471 mmu-miR-692 384309 Trim56 cucaCUCCGCGAGUUUCUCUa ||| | | ||||||| cuugGAGCAGGUGAAAGAGAa 2 18 748 768 [mm9:5:137587522-137587542:-] 0.5001 153 7 -16.70 -0.4199 MIMAT0003476 mmu-miR-669b 384309 Trim56 uguacGUGUACGUGUGUUUUGa || | | | ||||||| aaaaaCAAAAGAAAACAAAACa 2 18 722 743 [mm9:5:137587547-137587568:-] 0.5000 153 7 -8.00 -1.1600 MIMAT0003476 mmu-miR-669b 384309 Trim56 uguacguguacgUGUGUUUUga | |||||| uuccuuccuaaaAAACAAAAga 3 11 712 733 [mm9:5:137587557-137587578:-] 0.5000 122 0 -4.88 -0.1274 MIMAT0003500 mmu-miR-710 384309 Trim56 gaguugAGAGGGGUUCUGAACc ||| : |||||||| gcuuggUCU-UAGAAGACUUGg 2 17 650 670 [mm9:5:137587620-137587640:-] 0.5000 146 7 -19.92 -0.1129 MIMAT0003500 mmu-miR-710 384309 Trim56 gaGUUGA-GAGGGGUUC-UGAACc || || :| :|| || ||||| caCACCUGUUAUCCCAGCACUUGg 2 21 1053 1076 [mm9:5:137587214-137587237:-] 0.5000 123 0 -22.21 -0.1938 MIMAT0003500 mmu-miR-710 384309 Trim56 gagUUGA-GAGG-GGUUC-UGAACc :||| |||: : ||| ||||| cagGACUCCUCUGUAAAGCACUUGc 2 20 345 369 [mm9:5:137587921-137587945:-] 0.5000 121 0 -16.92 -0.2843 MIMAT0003512 mmu-miR-450b-3p 384309 Trim56 uacGUACGUUUUACAAGGGUUa || | :: || ||||||| ggcCAAG-GGCAUUUUCCCAAc 2 20 101 121 [mm9:5:137588169-137588189:-] 0.5331 149 7 -11.50 -0.4413 MIMAT0004210 mmu-miR-804 384309 Trim56 agguccacuccuUGUUGAGUGu | ||||||| aagcacuugccuAGAACUCACc 2 11 360 381 [mm9:5:137587909-137587930:-] 0.5000 142 7 -10.61 -0.1805 MIMAT0004856 mmu-miR-105 384309 Trim56 ugGUGUUC-GUAGACUCGUGAACc ||| | :||| |||||||| caCACCUGUUAUCCCAGCACUUGg 2 22 1053 1076 [mm9:5:137587214-137587237:-] 0.5000 160 7 -24.87 -0.1586 MIMAT0004856 mmu-miR-105 384309 Trim56 ugGUGUU-CGUAGAC---UCGUGAACc || :| | |||| |||||||| guCAGGACUCCUCUGUAAAGCACUUGc 2 22 343 369 [mm9:5:137587921-137587947:-] 0.5381 151 7 -18.33 -0.3185 MIMAT0004868 mmu-miR-343 384309 Trim56 agaCCCGUGUACUUCCCUCu | | |: ||||||| aaaGAGAAUCCUAAGGGAGa 2 18 761 780 [mm9:5:137587510-137587529:-] 0.5003 141 7 -13.12 -0.7367 MIMAT0004893 mmu-miR-574-5p 384309 Trim56 ugUGUGAGU-GU-GUGUGUGUGAGu | |: || || ||||||||||| ccAGAUGCAGCAUCACACACACUCa 2 22 1026 1050 [mm9:5:137587240-137587264:-] 0.5000 167 7 -27.20 -0.8050 MIMAT0004930 mmu-miR-466d-5p 384309 Trim56 guacaUGUACAUGCGUGUGUGu ||| || ||||||| gcaucACACACACUCACACACa 2 18 1035 1056 [mm9:5:137587234-137587255:-] 0.5000 153 7 -17.60 -0.6756 MIMAT0004938 mmu-miR-875-3p 384309 Trim56 guaucggAGUCAUAA-AAGUCc |: ||||| ||||| uucuugaUUUGUAUUCUUCAGa 2 15 304 325 [mm9:5:137587965-137587986:-] 0.5762 122 0 -8.45 -0.8452 MIMAT0005832 mmu-miR-669g 384309 Trim56 uagUACAGUUGUGUAUGUUA-CGu || |||: ||| ||||| || gagAUCUCAGAACA-ACAAUAGCa 2 21 900 922 [mm9:5:137587368-137587390:-] 0.5056 130 0 -13.01 -0.6399 MIMAT0005836 mmu-miR-1186 384309 Trim56 guacGGAAAUUAAGGUCGUGAg ||| | || |||||||| cacaCCUGUUAUCCCAGCACUu 2 19 1053 1074 [mm9:5:137587216-137587237:-] 0.5000 166 7 -21.03 -0.1194 MIMAT0005845 mmu-miR-466k 384309 Trim56 agUGUACAU-GUACAUGUGUGUGu | ||| | ||| |||||||| ccAGAUGCAGCAU-CACACACACu 2 22 1026 1048 [mm9:5:137587242-137587264:-] 0.5000 158 7 -18.60 -0.4130 MIMAT0005860 mmu-miR-1199 384309 Trim56 ggcgcgcuggCCCUGAGUCu | ||||||| ucaccaaugaGAGACUCAGu 2 11 377 396 [mm9:5:137587894-137587913:-] 0.5000 142 7 -15.28 -0.3264 MIMAT0007872 mmu-miR-1906 384309 Trim56 ucGGGACG--GAGUCCGACGACGu :||||| || |||||||||| auUCCUGCAGCUAAGGCUGCUGCu 2 21 246 269 [mm9:5:137588021-137588044:-] 0.5762 175 7 -31.44 -0.2311 MIMAT0007874 mmu-miR-1904 384309 Trim56 ggagggAGGUC--UCCUCGUCUUg | ||| | ||||||| agagagUGCAGGCACAAGCAGAAg 2 17 983 1006 [mm9:5:137587284-137587307:-] 0.5001 143 7 -16.31 -0.1887 MIMAT0007876 mmu-miR-1907 384309 Trim56 ugGAGGUCUA-GGAGACGACGAg || ||| | |||||||| ucCUGCAGCUAAGGCUGCUGCUg 2 21 248 270 [mm9:5:137588020-137588042:-] 0.5762 151 7 -23.81 -0.1576 MIMAT0009404 mmu-miR-1940 384309 Trim56 uugacgagguggaagAGUCAGGAGGUa ||| ||||||| gggagauaacauaagUCA-UCCUCCAa 2 13 775 800 [mm9:5:137587490-137587515:-] 0.5003 146 7 -16.19 -0.6923 MIMAT0009417 mmu-miR-1950 384309 Trim56 acUGGUAUAGGAAUCUACGUCu |:|| |||| |||||||| agAUCAAAUCC--AGAUGCAGc 2 21 1017 1036 [mm9:5:137587254-137587273:-] 0.5000 165 7 -23.88 -0.3420 MIMAT0009455 mmu-miR-1983 384309 Trim56 ucUUUUGUACGAGGUCCACUc ||| | || ||||||| caAAACCUUGGAGCAGGUGAa 2 20 742 762 [mm9:5:137587528-137587548:-] 0.5001 155 7 -13.49 -0.4943 MIMAT0012771 mmu-miR-432 384309 Trim56 gacggGUGACUAG-AUGAGGUUCu ||: :|| | ||||||| gauaaCAUAAGUCAUCCUCCAAGc 2 19 779 802 [mm9:5:137587488-137587511:-] 0.5003 149 7 -14.38 -0.3026 MIMAT0015646 mmu-miR-3474 384309 Trim56 cuUAGG--UGCAGAGGAGGGUCCc :||| | ||| :||||||| aaGUCCUGAAGUCAAUUCCCAGGc 2 21 683 706 [mm9:5:137587584-137587607:-] 0.5000 155 7 -25.93 -0.6230 MIMAT0000123 mmu-miR-1 384309 Trim56 uaUGUAUGAAGAAAU-GUAAGGu ::|| |||| | |||||| uuGUAUUCUUCAGAACCAUUCCu 2 21 312 334 [mm9:5:137587956-137587978:-] 0.5762 124 6 -12.55 -0.2956 MIMAT0000123 mmu-miR-1 384309 Trim56 uaUGUAUGAAGAAAUG-UAAGGu :| |:|||: || ||||| cuGCUUGCUUUGGAACAAUUCCu 2 21 229 251 [mm9:5:137588039-137588061:-] 0.5762 120 0 -11.63 -0.2361 MIMAT0000124 mmu-miR-15b 384309 Trim56 acauUUGGUACUACACGACGAu |:|:| |: ||||||| cugcAGCUAAGG-CUGCUGCUg 2 19 250 270 [mm9:5:137588020-137588040:-] 0.5762 148 7 -15.88 -0.1606 MIMAT0000211 mmu-miR-182 384309 Trim56 gccacacucaagAUGGUAACGGUUu || ||||||||| ucagaacaacaaUAGCAUUGCCAAu 2 14 906 930 [mm9:5:137587360-137587384:-] 0.5056 157 7 -14.29 -0.4904 MIMAT0000225 mmu-miR-195 384309 Trim56 cgguuauaaagacACGACGAu ||||||| cugcagcuaaggcUGCUGCUg 2 9 250 270 [mm9:5:137588020-137588040:-] 0.5762 140 7 -15.35 -0.1622 MIMAT0000225 mmu-miR-195 384309 Trim56 cgGUUAUAAAGACAC-GACGAu ||:|| | ||| ||||| cuCAGUAGUAGAGUGCCUGCUa 2 20 391 412 [mm9:5:137587878-137587899:-] 0.5000 123 0 -17.00 -0.1953 MIMAT0000366 mmu-miR-290-5p 384309 Trim56 uuucacgggGGUAU-CAAACUCa ::||| ||||||| gcaggaggaUUAUAUGUUUGAGc 2 14 1086 1108 [mm9:5:137587182-137587204:-] 0.5000 148 7 -14.57 -0.2185 MIMAT0000366 mmu-miR-290-5p 384309 Trim56 uuucacgggGGUAUC-AAACUCa | |||| |||||| guuggcuggCAAUAGCUUUGAGc 2 14 178 200 [mm9:5:137588090-137588112:-] 0.5762 121 6 -12.87 -0.1223 MIMAT0000368 mmu-miR-291a-3p 384309 Trim56 cguguguuucaccUUCGUGAAa |||||||| ggacuccucuguaAAGCACUUg 2 10 347 368 [mm9:5:137587922-137587943:-] 0.5000 145 7 -11.06 -0.1794 MIMAT0000369 mmu-miR-292-5p 384309 Trim56 guuUUCU-CGGGGGU-CAAACUCa |:|| | :: :| ||||||| ggcAGGAGGAUUAUAUGUUUGAGc 2 20 1085 1108 [mm9:5:137587182-137587205:-] 0.5000 145 7 -19.00 -0.2145 MIMAT0000372 mmu-miR-294 384309 Trim56 uguguguuuucccUUCGUGAAa |||||||| ggacuccucuguaAAGCACUUg 2 10 347 368 [mm9:5:137587922-137587943:-] 0.5000 145 7 -9.12 -0.1811 MIMAT0000373 mmu-miR-295 384309 Trim56 ucUGAGUUUUCAUCAUCGUGAAa |||| ||| ||||||| ggACUCCUCUGUA-AAGCACUUg 2 22 347 368 [mm9:5:137587922-137587943:-] 0.5000 151 7 -17.61 -0.1794 MIMAT0000380 mmu-miR-302a 384309 Trim56 agugguuuuguaccUUCGUGAAu |||||||| aggacuccucuguaAAGCACUUg 2 10 346 368 [mm9:5:137587922-137587944:-] 0.5000 145 7 -13.92 -0.1828 MIMAT0000526 mmu-miR-15a 384309 Trim56 guguUUGGUAAUAC-ACGACGAu |:|:| | | ||||||| cugcAGCUA--AGGCUGCUGCUg 2 19 250 270 [mm9:5:137588020-137588040:-] 0.5762 142 7 -15.42 -0.1622 MIMAT0000527 mmu-miR-16 384309 Trim56 gcGGUUAUAAAUGC--ACGACGAu || : | || | ||||||| uuCCUGCAGCUAAGGCUGCUGCUg 2 21 247 270 [mm9:5:137588020-137588043:-] 0.5762 143 7 -17.69 -0.1622 MIMAT0000527 mmu-miR-16 384309 Trim56 gcGGUUAUAAAUGCAC-GACGAu :||:|| | : ||| ||||| acUCAGUAGUAGAGUGCCUGCUa 2 21 390 412 [mm9:5:137587878-137587900:-] 0.5000 128 0 -18.09 -0.1953 MIMAT0000548 mmu-miR-322 384309 Trim56 agguuUUGUACUUAACGACGAc |:| :: ||||||| ccugcAGCUAAGGCUGCUGCUg 2 18 249 270 [mm9:5:137588020-137588041:-] 0.5762 141 7 -18.96 -0.1622 MIMAT0000582 mmu-miR-338-3p 384309 Trim56 guuGUUUUA-GUGA--C-UACGACCu |||:|| :::| | ||||||| cguCAAGAUAUGUUAGGCAUGCUGGa 2 20 821 846 [mm9:5:137587444-137587469:-] 0.5057 148 7 -17.36 -0.3975 MIMAT0000656 mmu-miR-139-5p 384309 Trim56 gaccUCUGUG-CACGUGACAUCu :|:||: | |||||||| gucuGGGCAUGGCUCACUGUAGa 2 19 430 452 [mm9:5:137587838-137587860:-] 0.5000 153 7 -27.73 -0.1063 MIMAT0000661 mmu-miR-214 384309 Trim56 ugacGGACAGACACGGACGACa |:|| || |||||||| aagaCUUGGCU-AGCCUGCUGa 2 19 662 682 [mm9:5:137587608-137587628:-] 0.5000 156 7 -21.47 -0.2992 MIMAT0000662 mmu-miR-216a 384309 Trim56 aguGUCAACGGUCGACUCUAAu :|| ||:: :||||||| uuuUAGGUGUU--UUGAGAUUu 2 20 274 293 [mm9:5:137587997-137588016:-] 0.5762 148 7 -12.37 -0.7292 MIMAT0000667 mmu-miR-33 384309 Trim56 acgUUACGUUGAUGU-UACGUg :|| ||| | || ||||| ugaGAU-CAAAUCCAGAUGCAg 2 19 1015 1035 [mm9:5:137587255-137587275:-] 0.5001 120 0 -7.31 -0.2108 MIMAT0000711 mmu-miR-365 384309 Trim56 uauUCCUA-AAAAUC----CCCGUAAu ||||| ||:| ||||||| uauAGGAUGAGUUGGCCAAGGGCAUUu 2 20 88 114 [mm9:5:137588176-137588202:-] 0.4899 145 7 -19.06 -0.3608 MIMAT0003130 mmu-miR-486 384309 Trim56 gagccccgucgaguCAUGUCCu ||||||| guuccuuuugugauGUACAGGg 2 9 135 156 [mm9:5:137588134-137588155:-] 0.5762 140 7 -14.33 -0.6851 MIMAT0003374 mmu-miR-302b 384309 Trim56 gaugauuuuguaccUUCGUGAAu |||||||| aggacuccucuguaAAGCACUUg 2 10 346 368 [mm9:5:137587922-137587944:-] 0.5000 145 7 -12.77 -0.1828 MIMAT0003377 mmu-miR-302d 384309 Trim56 ugUGAGUUUGUACCUUCGUGAAu |||| ::| |||||||| ggACUCCUCUGU-AAAGCACUUg 2 22 347 368 [mm9:5:137587922-137587943:-] 0.5000 151 7 -16.06 -0.1828 MIMAT0003893 mmu-miR-761 384309 Trim56 acacagucaaaGUGGGACGACg :| ||||||| gaagacuuggcUAGCCUGCUGa 2 12 661 682 [mm9:5:137587608-137587629:-] 0.5000 143 7 -15.65 -0.3017 MIMAT0003453 mmu-miR-497 384309 Trim56 auguUUGGUGUCACACGACGAc |:|:| || ||||||| cugcAGCUA-AGGCUGCUGCUg 2 19 250 270 [mm9:5:137588020-137588040:-] 0.5762 152 7 -19.55 -0.1622 MIMAT0003453 mmu-miR-497 384309 Trim56 auguUUGGUGUCACAC-GACGAc |:: ::|| ||| ||||| acucAGUAGUAGAGUGCCUGCUa 2 19 390 412 [mm9:5:137587878-137587900:-] 0.5000 122 0 -15.04 -0.1990 MIMAT0003460 mmu-miR-449c 384309 Trim56 ggucGAUCGUUACGUG-ACGGa || |:|| |||| |||| uccuCU-GUAAAGCACUUGCCu 2 18 351 371 [mm9:5:137587919-137587939:-] 0.5000 123 0 -19.70 -0.2566 MIMAT0004889 mmu-miR-504 384309 Trim56 cuAUCUCACGUCU--GGU-CCCAGa |:|:|| |||| :|| ||||| uaUGGGGU-CAGAGGUCAGGGGUCa 2 21 960 983 [mm9:5:137587307-137587330:-] 0.5001 125 0 -23.34 -0.3339 MIMAT0004937 mmu-miR-875-5p 384309 Trim56 guggacuaUUUUGACUCCAUAu :||:: ||||||| cacaagcaGAAGUGGAGGUAUg 2 15 995 1016 [mm9:5:137587274-137587295:-] 0.5001 150 7 -15.98 -0.1548

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G072136 Trim56 Mus musculus 384309

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Trim56 mmu-miR-692 beg:749 end:768 pic:3' CTCACTCCGCGAGTTTCTCTA 5'& ||| |||.| ||||||| &5' GAGC-AGGTG---AAAGAGA- 3' Trim56 mmu-miR-302c beg:349 end:368 pic:3' GGTGACTTTGTACCTTCGTGAA 5'& || ||| |||||||| &5' CCTCTGTA------AAGCACTT 3' Trim56 mmu-miR-343 beg:770 end:781 pic:3' AGACCCGTGTACTTCCCTCT 5'& |||||||| &5' ------------AAGGGAGA 3' Trim56 mmu-miR-680 beg:201 end:215 pic:3' GGGGGTACAGTCGTCTACGGG 5'& ||||||||||| &5' ---------CAGCAGATGCC- 3' Trim56 mmu-miR-294 beg:354 end:368 pic:3' TGTGTGTTTTCCCTTCGTGAAA 5'& | |||||||| &5' ----------GTAAAGCACTT- 3' Trim56 mmu-miR-302b beg:357 end:369 pic:3' GATGATTTTGTACCTTCGTGAAT 5'& ||||||||. &5' --------------AAGCACTTG 3' Trim56 mmu-miR-382 beg:512 end:535 pic:3' GCTTAGGTGG-TGCTTGTTGAAG 5'& |||||| || |.||. ..|| &5' -GAATCCCCCAATGAGGGGCT-- 3' Trim56 mmu-miR-382 beg:565 end:588 pic:3' GCTTAGGTGG-TGCTTGTTGAAG 5'& |||||| || |.||. ..|| &5' -GAATCCCCCAATGAGGGGCT-- 3' Trim56 mmu-miR-338-3p beg:829 end:847 pic:3' GTTGTTTTAGTGAC-TACGACCT 5'& .|.| | |||||||| &5' -------GTTAG-GCATGCTGGA 3' Trim56 mmu-miR-466d-5p beg:1028 end:1048 pic:3' GTACATGTACATGCGTGTGTGT 5'& |.|| | ||||||| &5' ----TGCAGCATCACACACAC- 3' Trim56 mmu-miR-466k beg:1035 end:1058 pic:3' AGTGTACATGTACATGTGTGTGT 5'& ||||| ||| |||||||| &5' TCACAC--ACACTCACACACAC- 3' Trim56 mmu-miR-466d-5p beg:1037 end:1057 pic:3' GTACATGTACATGCGTGTGTGT 5'& ||| || |||||||| &5' -----ACACACACTCACACACA 3' Trim56 mmu-miR-1927 beg:962 end:983 pic:3' AGTCAGGGATTGTAGGTCTCCAG 5'& .||| .| .| |||.|||| &5' --GGTCA--GAGGT-CAGGGGTC 3' Trim56 mmu-miR-412 beg:747 end:763 pic:3' GCCGATCACCTGGTCCACTT 5'& |||| |||||||| &5' -------TGGAGCAGGTGAA 3' Trim56 mmu-miR-709 beg:502 end:521 pic:3' AGGAGGACGGAGACGGAGG 5'& || ||||||| | ||| &5' -CC-CCTGCCTA-GAATCC 3' Trim56 mmu-miR-709 beg:555 end:574 pic:3' AGGAGGACGGAGACGGAGG 5'& || ||||||| | ||| &5' -CC-CCTGCCTA-GAATCC 3' Trim56 mmu-miR-709 beg:608 end:627 pic:3' AGGAGGACGGAGACGGAGG 5'& || ||||||| | ||| &5' -CC-CCTGCCTA-GAATCC 3' Trim56 mmu-miR-31 beg:350 end:372 pic:3' GTCGATACGG-TCGTAGAACGGA 5'& || ||. |||| ||||||| &5' ---CTCTGTAAAGCA-CTTGCCT 3' Trim56 mmu-miR-31 beg:437 end:463 pic:3' GTCGAT--ACGG-TCGTAGAACGGA 5'& .||| ||. || . ||||.|| &5' -GGCTCACTGTAGAGGG-CTTGTCT 3' Trim56 mmu-miR-1186b beg:493 end:522 pic:3' CACCA---CGT--ACGGAAATTAGGGT 5'& ||||| || ||||| |||||| &5' GTGGTAGAGCCCCTGCCTAGAATCCC- 3' Trim56 mmu-miR-693-5p beg:529 end:547 pic:3' CTTTTGAAAGCCTACACCGAC 5'& ...|| || |||||| &5' --GGGCTGG-GGGCGTGGCT- 3' Trim56 mmu-miR-1186b beg:546 end:575 pic:3' CACCA---CGT--ACGGAAATTAGGGT 5'& ||||| || ||||| |||||| &5' GTGGTAGAGCCCCTGCCTAGAATCCC- 3' Trim56 mmu-miR-693-5p beg:582 end:600 pic:3' CTTTTGAAAGCCTACACCGAC 5'& ...|| || |||||| &5' --GGGCTGG-GGGCGTGGCT- 3' Trim56 mmu-miR-1186b beg:599 end:628 pic:3' CACCA---CGT--ACGGAAATTAGGGT 5'& ||||| || ||||| |||||| &5' GTGGTAGAGCCCCTGCCTAGAATCCC- 3' Trim56 mmu-miR-693-5p beg:636 end:653 pic:3' CTTTTGAAAGCCTA-CACCGAC 5'& || ||. |||||| &5' -------TTGGGGGCGTGGCT- 3' Trim56 mmu-miR-1186b beg:665 end:690 pic:3' CACCA--CGTACGGAAATTAGGGT 5'& ||| || |||. |.|||. &5' -TGGCTAGCCTGCTGAAAGTCCT- 3' Trim56 mmu-miR-693-5p beg:481 end:494 pic:3' CTTTTGAAAGCCTACACCGAC 5'& || |||||| &5' ----------GGGCGTGGCT- 3' Trim56 mmu-miR-3099 beg:663 end:679 pic:3' AGGGGTTGGAGAGAGATCGGAT 5'& ||. |||||||. &5' --------CTTGG-CTAGCCTG 3' Trim56 mmu-miR-130bstar beg:748 end:767 pic:3' TCATCACGTTGTCC-CTTTCTCA 5'& || |.|||| ||||||| &5' -----TGGAGCAGGTGAAAGAG- 3' Trim56 mmu-miR-3099star beg:1066 end:1084 pic:3' GTTCCCGACCTTCCTTCGACC 5'& || .|||||||| &5' -----GCACTTGGGAAGCTG- 3' Trim56 mmu-miR-875-5p beg:1000 end:1017 pic:3' GTGGACTATTTTGACTCCATAT 5'& .||. |||||||. &5' --------GAAGTGGAGGTATG 3' Trim56 mmu-miR-105 beg:351 end:369 pic:3' TGGTGTTCGTAGAC---TCGTGAACC 5'& |||| |||||||| &5' ----------TCTGTAAAGCACTTG- 3' Trim56 mmu-miR-1929 beg:347 end:376 pic:3' GAGACGAGATATTTCA-----GGATCTT 5'& || ||||.||||| ||||||| &5' --CTCCTCTGTAAAGCACTTGCCTAGAA 3' Trim56 mmu-miR-1948 beg:352 end:375 pic:3' GACATGCTCACGAG-ACGGATTT 5'& ||||| || | ||||||.| &5' CTGTAAA---GCACTTGCCTAGA 3' Trim56 mmu-miR-345-5p beg:330 end:348 pic:3' TTCGTGACCTGATCCCCAGTCG 5'& ||||. |||||||| &5' -----CTGGGAT-GGGGTCAG- 3' Trim56 mmu-miR-486 beg:141 end:157 pic:3' GAGCCCCGTCGAGTCATGTCCT 5'& |. |||||||. &5' ---------GTGATGTACAGGG 3' Trim56 mmu-miR-378star beg:332 end:350 pic:3' TGTGTCCTGGACCTCAGTCCTC 5'& .||| |||.||||||| &5' ----GGGA--TGGGGTCAGGA- 3' Trim56 mcmv-miR-m108-1 beg:892 end:912 pic:3' GCTGTGCTCGGTGGCAGTCTTT 5'& || .| || |.| |||||| &5' -GAGGCCAGAGATC-TCAGAA- 3' Trim56 mcmv-miR-m108-2-3p beg:962 end:984 pic:3' TGGCCAGTGAGCAGAGCTCAGTG 5'& ||||| ||| |.|||| &5' ---GGTCAGAGGTCAGGGGTCA- 3' Trim56 mcmv-miR-M44-1 beg:833 end:855 pic:3' TGGCGCCGA--GACC-TTTTTCTAT 5'& ||| |||| ||.|||.|. &5' -----GGCATGCTGGAAAGAAGGTG 3' Trim56 mghv-miR-M1-2 beg:28 end:50 pic:3' TTTCTCCCCCTCTCCC-CCAGAC 5'& |..||||| |.||||| || &5' AGGGAGGGAGGGAGGGAGG---- 3' Trim56 mghv-miR-M1-2 beg:40 end:62 pic:3' TTTCTCCCCCTCTCCC-CCAGAC 5'& |..||||| |.||||| || &5' AGGGAGGGAGGGAGGGAGG---- 3' Trim56 mmu-miR-101b beg:251 end:273 pic:3' AAGTCGATAGTGTC-ATGACAT 5'& |||||| .| | |.||||| &5' --CAGCTAAGGCTGCTGCTGTA 3' Trim56 mmu-miR-105 beg:1053 end:1077 pic:3' TGGTGTTC-GTAGACTCGTGAACC 5'& ||| | .||| ||||||||| &5' --CACCTGTTATCCCAGCACTTGG 3' Trim56 mmu-miR-1186 beg:1054 end:1075 pic:3' GTACGGAAATTAAGGTCGTGAG 5'& ||| || ||||||||. &5' ----CCTGTTATCCCAGCACTT 3' Trim56 mmu-miR-1195 beg:358 end:380 pic:3' ACTCGTCCGACCGGAGCTTGAGT 5'& |||| || |||| ||||||| &5' --AGCA--CTTGCCTAGAACTCA 3' Trim56 mmu-miR-1196 beg:881 end:902 pic:3' TCC-GTCTCCGTCCA-TCTAAA 5'& .|| |||||| ||| ||| &5' GGGTCAGAGG-AGGCCAGA--- 3' Trim56 mmu-miR-1199 beg:477 end:497 pic:3' GGCGCGCTGGCCCTGAGTCT 5'& |.| |. || |.||||| &5' --GTGGGGGCGTGGCTCAG- 3' Trim56 mmu-miR-1199 beg:529 end:550 pic:3' GGCG-CGCTGGCCCTGAGTCT 5'& || | |. || |.||||| &5' --GCTGGGGGCGTGGCTCAG- 3' Trim56 mmu-miR-1199 beg:582 end:603 pic:3' GGCG-CGCTGGCCCTGAGTCT 5'& || | |. || |.||||| &5' --GCTGGGGGCGTGGCTCAG- 3' Trim56 mmu-miR-125bstar beg:296 end:316 pic:3' TCCAGGGTTCTTGGACTGAACA 5'& || | |.|||.|||| &5' ----CCTGATT-CTTGATTTGT 3' Trim56 mmu-miR-135a beg:772 end:794 pic:3' AGTGTATCCT-TATTT--TTCGGTAT 5'& .||| |||| |||.||| &5' ------GGGAGATAACATAAGTCAT- 3' Trim56 mmu-miR-139-5p beg:431 end:453 pic:3' GACCTCTGTGCAC-GTGACATCT 5'& |||| .||.| ||||||||| &5' CTGG--GCATGGCTCACTGTAGA 3' Trim56 mmu-miR-141 beg:162 end:182 pic:3' GGTAGAAATGG-TCT-GTCACAAT 5'& |||. ||| .||||||. &5' -------TACTAAGAGTAGTGTTG 3' Trim56 mmu-miR-155 beg:911 end:926 pic:3' TGGGGATAGTGTTAATCGTAATT 5'& |||| |||||||. &5' ---------ACAA-TAGCATTG- 3' Trim56 mmu-miR-16 beg:252 end:271 pic:3' GCGGTTATAAATGCACGACGAT 5'& ||.|| .| |||||||. &5' -GCTAAG----GC-TGCTGCTG 3' Trim56 mmu-miR-17star beg:433 end:452 pic:3' GATGTTCACGG---GAGTGACGTCA 5'& || |||||||.|| &5' --------GCATGGCTCACTGTAG- 3' Trim56 mmu-miR-182 beg:915 end:930 pic:3' GCCACACTCAAGATGGTAACGGTTT 5'& || ||||||||| &5' ------------TAGCATTGCCAA- 3' Trim56 mmu-miR-188-5p beg:621 end:640 pic:3' GGGAGGTGGTACGTTCCCTAC 5'& ||| ||| | .||||.| &5' ---TCCCCCA-GGGAGGGGT- 3' Trim56 mmu-miR-1894-5p beg:760 end:781 pic:3' TCTCCGTCCACCATCCCCTCTC 5'& |||| |||||| &5' AGAGAATCCTAA---GGGAGA- 3' Trim56 mmu-miR-1896 beg:1110 end:1132 pic:3' GAGGAGTGGGTGGTAGTCTCTC 5'& ||| . |.|. |||||| &5' --CCTGGGCTATACGCAGAGA- 3' Trim56 mmu-miR-1896 beg:969 end:989 pic:3' GAGGAGTGGGTGG-TAGTCTCTC 5'& . .|| .|||||||| &5' ------GGTCAGGGGTCAGAGAG 3' Trim56 mmu-miR-1900 beg:16 end:38 pic:3' ACTTCCTGGTCTCTCCCGCCGG 5'& ||..||. |||.||||| || &5' TGGGGGG-CAGGGAGGGAGG-- 3' Trim56 mmu-miR-1903 beg:19 end:42 pic:3' ACAGAGTCCTTCTTCTTCTTCC 5'& | ||||.|| .||.|.||| &5' -GGGGCAGGGAG-GGAGGGAGG 3' Trim56 mmu-miR-1906 beg:247 end:269 pic:3' TCGGGACGGAG--TCCGACGACGT 5'& .||||| |||||||||| &5' --TCCTGCAGCTAAGGCTGCTGC- 3' Trim56 mmu-miR-1906 beg:1103 end:1128 pic:3' TCGGGACGGAGTCCGACGA-CGT 5'& ||||| |||| .|||| ||| &5' AGCCCAGCCT-GGGCTATACGCA 3' Trim56 mmu-miR-1907 beg:246 end:270 pic:3' TGGAGGTCTAGGA-GACGACGAG 5'& ||| ||| |||||||| &5' -CCTGCAGCTAAGGCTGCTGCT- 3' Trim56 mmu-miR-191star beg:974 end:994 pic:3' CCCTTGCTTTAGG--TTCACGTCG 5'& | .|| .||||||| &5' ------GGGGTCAGAGAGTGCAG- 3' Trim56 mmu-miR-1930 beg:997 end:1014 pic:3' TGCGACGTCCATGATACCTCCA 5'& |||| .||||||| &5' -----GCAGAA---GTGGAGGT 3' Trim56 mmu-miR-1937a beg:330 end:340 pic:3' ACCCCCGAGCAGGCCCTAA 5'& |.||||| &5' -----------CTGGGAT- 3' Trim56 mmu-miR-193star beg:373 end:395 pic:3' AGTAGAACGGGCG-TTTCTGGGT 5'& || || |.||||.|| &5' ----CTCACCAATGAGAGACTCA 3' Trim56 mmu-miR-1940 beg:781 end:800 pic:3' TTGACGAGGTGGAAGAGTCAGGAGGTA 5'& ||. ||| ||||||| &5' --------CATAAG-TCA-TCCTCCA- 3' Trim56 mmu-miR-1943 beg:698 end:721 pic:3' AGGTCCACG-GGTCTAGGAGGGAA 5'& ||||| .| ||||.||| &5' -CCAGGCATATCT--TCCTTCCT- 3' Trim56 mmu-miR-1948 beg:496 end:517 pic:3' GACATGCTCACGAGACGGATTT 5'& ||| ||| | |||||||.| &5' --GTA-GAGCCC-CTGCCTAGA 3' Trim56 mmu-miR-1948 beg:549 end:570 pic:3' GACATGCTCACGAGACGGATTT 5'& ||| ||| | |||||||.| &5' --GTA-GAGCCC-CTGCCTAGA 3' Trim56 mmu-miR-1948 beg:602 end:623 pic:3' GACATGCTCACGAGACGGATTT 5'& ||| ||| | |||||||.| &5' --GTA-GAGCCC-CTGCCTAGA 3' Trim56 mmu-miR-1948 beg:445 end:466 pic:3' GACATGCTCACGAGACGGATTT 5'& ||||| ||| ||| ||.|||.| &5' CTGTA-GAGGGCT-TGTCTAGA 3' Trim56 mmu-miR-1950 beg:1015 end:1036 pic:3' ACTGGTATAGGAATCTACGTCT 5'& ||.|| |||| |||||||| &5' -GATCAAATCC--AGATGCAG- 3' Trim56 mmu-miR-1952 beg:998 end:1020 pic:3' GTCTT--CCTCCCACCTCT 5'& ||||| ||||| |||| &5' CAGAAGTGGAGGTATGAGA 3' Trim56 mmu-miR-1952 beg:473 end:487 pic:3' GTCTTCCTCCCACCTCT 5'& ||||||||.|. &5' ------GAGGGTGGGGG 3' Trim56 mmu-miR-1952 beg:26 end:46 pic:3' GTCTTCCTCCCA-CCTCT 5'& .||.|||||| ||||. &5' -GGAGGGAGGGAGGGAGG 3' Trim56 mmu-miR-1952 beg:42 end:62 pic:3' GTCTTCCTCCCA-CCTCT 5'& .||.|||||| ||||. &5' -GGAGGGAGGGAGGGAGG 3' Trim56 mmu-miR-1953 beg:98 end:119 pic:3' GTCTTCGGA-CTCTTGAAAGGGT 5'& .||| |.| |.||||||| &5' ----GGCCAAGGGCATTTTCCCA 3' Trim56 mmu-miR-1955 beg:319 end:340 pic:3' TTTTCGACGTCAC-GT-AGGACCCTGA 5'& ||| || ||||||||. &5' --------CAGAACCATTCCTGGGAT- 3' Trim56 mmu-miR-1956 beg:1097 end:1121 pic:3' AGGC-GACT-GAGTCGGGACCTGA 5'& .| .||| | ||| |||||.|| &5' --TGTTTGAGCCCAG-CCTGGGCT 3' Trim56 mmu-miR-1960 beg:913 end:926 pic:3' TCGGGAGAAGATTGTCGTGACC 5'& ||.||||.|| &5' -----------AATAGCATTG- 3' Trim56 mmu-miR-196a beg:608 end:621 pic:3' GGGTTGTTGTACTTTGATGGAT 5'& ||| ||.|||| &5' CCC------------CTGCCTA 3' Trim56 mmu-miR-196a beg:214 end:235 pic:3' GGGTT-GTTGTACTTTGATGGAT 5'& ||. |||| |||||.|.|. &5' --CAGTCAACC--AAACTGCTTG 3' Trim56 mmu-miR-196b beg:218 end:235 pic:3' GGGTTGTTGTCCTTTGATGGAT 5'& |||| |||||.|.|. &5' -----CAACC--AAACTGCTTG 3' Trim56 mmu-miR-1971 beg:1099 end:1120 pic:3' AGAGTCGGGTCGGAAATG 5'& |.| |||||||||| .| &5' TTTGAGCCCAGCCTGGGC 3' Trim56 mmu-miR-1982.1 beg:474 end:486 pic:3' GACACCCTCTTGTATCCCACTCT 5'& ||||||.|. &5' --------------AGGGTGGGG 3' Trim56 mmu-miR-1982star beg:695 end:723 pic:3' GGAGGGGTCCT-------GGGAGGGTT 5'& |.|||||| ||.|||.|| &5' --TTCCCAGGCATATCTTCCTTCCTAA 3' Trim56 mmu-miR-1983 beg:752 end:762 pic:3' TCTTTTGTACGAGGTCCACTC 5'& ||||||| &5' -------------CAGGTGA- 3' Trim56 mmu-miR-200a beg:160 end:182 pic:3' TGTAGCAATGG-TCT-GTCACAAT 5'& | |||. ||| .||||||. &5' -----GCTACTAAGAGTAGTGTTG 3' Trim56 mmu-miR-200cstar beg:831 end:851 pic:3' GGTTTGTGACGACCCATTCTGC 5'& .|..|| |||||| |||| &5' -TAGGCA-TGCTGGA-AAGA-- 3' Trim56 mmu-miR-203star beg:310 end:331 pic:3' ACAACTTGACAGTTCTTGGTGA 5'& ||| |.| |. |||||||.| &5' --TTGTATTCTTCAGAACCATT 3' Trim56 mmu-miR-204 beg:28 end:53 pic:3' TCCGTATCCTA-CTGTTTCCCTT 5'& ||| | .||| || ..|||||. &5' AGGGA-GGGAGGGAGGGAGGGAG 3' Trim56 mmu-miR-204 beg:40 end:65 pic:3' TCCGTATCCTA-CTGTTTCCCTT 5'& ||| | .||| || ..|||||. &5' AGGGA-GGGAGGGAGGGAGGGAG 3' Trim56 mmu-miR-207 beg:27 end:54 pic:3' CTCCCT-CCTCTCGGTC-CTCTTCG 5'& |||||| ||||.| .| |.||.| &5' GAGGGAGGGAGGGAGGGAGGGAGG- 3' Trim56 mmu-miR-207 beg:43 end:68 pic:3' CTCCCT-CCTCTCGGTCCTCTTCG 5'& |||||| ||||.| .|||| .|| &5' GAGGGAGGGAGGGA-GGGAG-GGC 3' Trim56 mmu-miR-214 beg:661 end:682 pic:3' TGAC-GGACAGACACGGACGACA 5'& | |.|| || |||||||| &5' ---GACTTGGCTA-GCCTGCTG- 3' Trim56 mmu-miR-215 beg:963 end:984 pic:3' CAGACAGTT--TAGTATCCAGTA 5'& ||||. .||| .||||| &5' ----GTCAGAGGTCAGGGGTCA- 3' Trim56 mmu-miR-218 beg:187 end:204 pic:3' TGTACCAATCT-AGTTCGTGTT 5'& ||| | |||||| &5' -------TAGCTTTGAGCACA- 3' Trim56 mmu-miR-218 beg:982 end:1000 pic:3' TGTACCAATCTA--GTTCGTGTT 5'& ||| ||.|||||| &5' --------AGAGTGCAGGCACAA 3' Trim56 mmu-miR-218 beg:803 end:821 pic:3' TGTACCAATCTAGTTCGTGTT 5'& || ||| ||||.|.| &5' ----GGA-AGACCAAGTATA- 3' Trim56 mmu-miR-218-2star beg:310 end:331 pic:3' GCGCCACGAACT--GTCTTGGTAC 5'& ||. ||||||||| &5' -----TGTATTCTTCAGAACCAT- 3' Trim56 mmu-miR-2183 beg:967 end:985 pic:3' TCCTCCAGTCCCCAAGTT 5'& ||||||||||| |||. &5' --GAGGTCAGGGG-TCAG 3' Trim56 mmu-miR-2183 beg:871 end:891 pic:3' TCCTCCAGT-CCCCAAGTT 5'& |||.| || |||| |||. &5' AGGGGAACATGGGG-TCAG 3' Trim56 mmu-miR-290-3p beg:98 end:116 pic:3' CCCGAATTTTGATCCG----CCGTGAAA 5'& ||| ||||.||| &5' -------------GGCCAAGGGCATTTT 3' Trim56 mmu-miR-292-3p beg:93 end:116 pic:3' TGTGAGTTTTGGACCG----CCGTGAAA 5'& .| .|||| ||||.||| &5' --------GAGTTGGCCAAGGGCATTTT 3' Trim56 mmu-miR-295 beg:346 end:368 pic:3' TCTGAGTTTTCATCATCGTGAAA 5'& .||||| ||| ||||||| &5' GGACTCCTCTGTAA-AGCACTT- 3' Trim56 mmu-miR-302d beg:346 end:369 pic:3' TGTGAGTTTGTACCTTCGTGAAT 5'& |||| | ||||||||. &5' --ACTCCT-CTGTAAAGCACTTG 3' Trim56 mmu-miR-3072 beg:1 end:28 pic:3' TCTTCCGAAG---GACC---TCCCCCGT 5'& |||||. |||| .||||||| &5' ----GGCTTTTGGCTGGGGTGGGGGGCA 3' Trim56 mmu-miR-3099star beg:525 end:547 pic:3' GTTCCCGACCTTC-CTTCGACC 5'& |.|||||||..| | .||| &5' -AGGGGCTGGGGGCGTGGCT-- 3' Trim56 mmu-miR-3099star beg:578 end:600 pic:3' GTTCCCGACCTTC-CTTCGACC 5'& |.|||||||..| | .||| &5' -AGGGGCTGGGGGCGTGGCT-- 3' Trim56 mmu-miR-3099star beg:18 end:42 pic:3' GTTCCCGA-CCTTCCTTCGACC 5'& ..|||| |||.|||.| || &5' -GGGGGCAGGGAGGGAGGGAGG 3' Trim56 mmu-miR-30astar beg:667 end:686 pic:3' CGACGTTTGTAGGCTGACTTTC 5'& || || .||||||| &5' ---GCTAG---CCTGCTGAAAG 3' Trim56 mmu-miR-30bstar beg:1051 end:1069 pic:3' CTGCATTTGTAGGT--GTAGGGTC 5'& ||| || .||||||| &5' -------ACA-CCTGTTATCCCAG 3' Trim56 mmu-miR-30c-2star beg:102 end:119 pic:3' TCTCATTTGTCGGAAGAGGGTC 5'& || .|| ||.||||| &5' ------AAGGGCATTTTCCCA- 3' Trim56 mmu-miR-30estar beg:667 end:686 pic:3' CGACATTTGTA-GGCTGACTTTC 5'& ..| || .||||||| &5' ------GGCTAGCCTGCTGAAAG 3' Trim56 mmu-miR-30estar beg:828 end:848 pic:3' CGAC-ATTTGTAGGCTGACTTTC 5'& || ||..||| .|||.|| &5' --TGTTAGGCAT---GCTGGAA- 3' Trim56 mmu-miR-31star beg:424 end:443 pic:3' CTACCGTTATACAACCGTATCGT 5'& || |.| || |||||.|| &5' ---GG-AGTCTG--GGCATGGC- 3' Trim56 mmu-miR-322 beg:253 end:271 pic:3' AGGTTTTGTACTTAACGACGAC 5'& |.||..| |||||||| &5' -CTAAGGC------TGCTGCTG 3' Trim56 mmu-miR-328 beg:15 end:39 pic:3' TGC-CTTCCCGTCTCTCCCGGTC 5'& | |..||||||.||||| .| &5' --GTGGGGGGCAGGGAGGGAGGG 3' Trim56 mmu-miR-328 beg:960 end:985 pic:3' TGCCTTCCC-GTCTC----TCCCGGTC 5'& .||| ||||| .|||.||| &5' -----GGGGTCAGAGGTCAGGGGTCAG 3' Trim56 mmu-miR-330 beg:968 end:988 pic:3' CGGATTCT-GTGTCCGGGTCTCT 5'& .||. || .|| .|||||| &5' ----GAGGTCAGGGG-TCAGAGA 3' Trim56 mmu-miR-330star beg:267 end:288 pic:3' AGAGACGTCCGGGA-CACGAAACG 5'& |||.|| |||.|||| &5' ---CTGTAGTTTTAGGTGTTTTG- 3' Trim56 mmu-miR-331-3p beg:960 end:982 pic:3' AAGATCCTA-TC-CGGGTCCCCG 5'& |.||.| || | .||||||. &5' ---TGGGGTCAGAGGTCAGGGGT 3' Trim56 mmu-miR-335-3p beg:748 end:766 pic:3' CCAGTCCTCGTTATTACTTTTT 5'& ||||||. .|||||.| &5' -----GGAGCAG--GTGAAAGA 3' Trim56 mmu-miR-337-3p beg:520 end:538 pic:3' TCCGTAGTATATCCTCGACTT 5'& || |||.||||.. &5' ------CAATGAGGGGCTGGG 3' Trim56 mmu-miR-337-3p beg:573 end:591 pic:3' TCCGTAGTATATCCTCGACTT 5'& || |||.||||.. &5' ------CAATGAGGGGCTGGG 3' Trim56 mmu-miR-339-5p beg:9 end:32 pic:3' GCACTCGAGG--ACCTCCTGTCCCT 5'& .||| |||.||.|||||| &5' ----GGCTGGGGTGGGGGGCAGGGA 3' Trim56 mmu-miR-339-5p beg:136 end:158 pic:3' GCACTCGAGGAC-CTCC-TGTCCCT 5'& ||..|| || | ||||||| &5' ------CTTTTGTGATGTACAGGGA 3' Trim56 mmu-miR-343 beg:20 end:42 pic:3' AGACCCGTGTA--CTTCCCTCT 5'& ||||| . |.||||||. &5' ---GGGCAGGGAGGGAGGGAGG 3' Trim56 mmu-miR-343 beg:29 end:50 pic:3' AGACCCGTGTA-CTTCCCTCT 5'& ||| |.||||||. &5' ---GGGAGGGAGGGAGGGAGG 3' Trim56 mmu-miR-343 beg:41 end:62 pic:3' AGACCCGTGTA-CTTCCCTCT 5'& ||| |.||||||. &5' ---GGGAGGGAGGGAGGGAGG 3' Trim56 mmu-miR-345-5p beg:962 end:985 pic:3' TTC-GTGACCTGATCCCCAGTCG 5'& ..| || || | ||||||||| &5' GGGTCAGAGGTC-AGGGGTCAG- 3' Trim56 mmu-miR-345-5p beg:868 end:891 pic:3' TTCGTGA-CCTGAT-CCCCAGTCG 5'& || ||| |||||||| &5' ---CAAGGGGAACATGGGGTCAG- 3' Trim56 mmu-miR-346 beg:982 end:1005 pic:3' TCTC-CGTCCGTGAGCCCGTCTGT 5'& |||| |||||||| ||||| &5' AGAGTGCAGGCACAA--GCAGA-- 3' Trim56 mmu-miR-3474 beg:690 end:706 pic:3' CTTAGGTGCAGAGGAGGGTCCC 5'& ||| .||||||| &5' --------GTCAATTCCCAGG- 3' Trim56 mmu-miR-365 beg:93 end:114 pic:3' TATTCCTAAAAATC----CCCGTAAT 5'& || ||.| ||||||| &5' -----GAG--TTGGCCAAGGGCATT- 3' Trim56 mmu-miR-375 beg:228 end:247 pic:3' AGTGCGCTCGGCTTGCTTGTTT 5'& || ||. |||||| &5' ----GCTTGCTTTG-GAACAA- 3' Trim56 mmu-miR-375 beg:897 end:915 pic:3' AGTGCGCTCGGCTTGCTTGTTT 5'& ||| |||||| &5' ------GAGATCTCAGAACAA- 3' Trim56 mmu-miR-376b beg:131 end:149 pic:3' TTCACCTACAAGG-AGATACTA 5'& |||||| |.|.|||| &5' -------TGTTCCTTTTGTGAT 3' Trim56 mmu-miR-378star beg:958 end:981 pic:3' TGTGTCCTGGACCTCAGTCCTC 5'& .|..|| | | ||||||.| &5' -TATGGGGTCAGAGGTCAGGGG 3' Trim56 mmu-miR-380-5p beg:213 end:227 pic:3' GCGTACAAGATACCAGTTGGTA 5'& ||| |||||||| &5' -GCA---------GTCAACCA- 3' Trim56 mmu-miR-432 beg:781 end:802 pic:3' GACGGGTGACTAGAT-GAGGTTCT 5'& ||. .|| ||||||| &5' -----CATAAGTCATCCTCCAAG- 3' Trim56 mmu-miR-450b-5p beg:341 end:362 pic:3' ATAAGTCCTTGTATGACGTTTT 5'& |||||| |||.|||. &5' ---TCAGGACTCCTCTGTAAAG 3' Trim56 mmu-miR-466f-5p beg:1027 end:1048 pic:3' GTACGT-GTACGTGTGTGTGCAT 5'& ||||| ||| ||||||||| &5' -ATGCAGCAT-CACACACAC--- 3' Trim56 mmu-miR-467b beg:353 end:370 pic:3' GTATATGTACGTC-CGTGAATG 5'& ||.| ||||||.| &5' --------TGTAAAGCACTTGC 3' Trim56 mmu-miR-483star beg:19 end:44 pic:3' TTCTG-CCCTCCCCTCCTCACT 5'& ..|.| ||||||| |||| || &5' GGGGCAGGGAGGGAGGGAGGGA 3' Trim56 mmu-miR-484 beg:284 end:304 pic:3' TAGCCCTCCCCTGACTCGGACT 5'& ||| ||||||| &5' -----GAGATTTAGAAGCCTGA 3' Trim56 mmu-miR-490 beg:398 end:417 pic:3' GTCGTACCTCA-GGA-GGTCCAAC 5'& |||| ||| |.||||| &5' -------GAGTGCCTGCTAGGTT- 3' Trim56 mmu-miR-493 beg:192 end:219 pic:3' GGAC-CGTGTGTCATCC-TGGAAGT 5'& .|| |||||||| || .|| || &5' -TTGAGCACACAGCAGATGCCAGCA 3' Trim56 mmu-miR-505 beg:169 end:184 pic:3' TCTTTTGGTCGTTCACAACTGC 5'& ||. |||||||.| &5' --------AGT-AGTGTTGGC- 3' Trim56 mmu-miR-532-3p beg:2 end:26 pic:3' ACGT---TCGGAACCCACACCCTCC 5'& || .|| |||| |||||.|| &5' -GCTTTTGGC--TGGG-GTGGGGGG 3' Trim56 mmu-miR-532-3p beg:465 end:487 pic:3' ACGTTCGGA-AC-CCACACCCTCC 5'& |||| || || || |||||.| &5' TGCA--CCAATGAGG-GTGGGGG- 3' Trim56 mmu-miR-544 beg:1072 end:1092 pic:3' CTCGAACGATTTTTACGTCTTA 5'& |.| |||.| ||||.| &5' GGGAA-GCTGAG---GCAGGA- 3' Trim56 mmu-miR-592 beg:986 end:1000 pic:3' TGTAGTAGCGTATAACTGTGTTA 5'& .||| |.||||| &5' -------TGCA----GGCACAA- 3' Trim56 mmu-miR-665 beg:316 end:337 pic:3' TCCCTGGAGTCG----GAGGACCA 5'& |.|||| .|||||| &5' -----CTTCAGAACCATTCCTGG- 3' Trim56 mmu-miR-666-5p beg:388 end:412 pic:3' CCGAGAGT-GTCGA--CACGGGCGA 5'& |||| .||. |||||.||| &5' ----CTCAGTAGTAGAGTGCCTGCT 3' Trim56 mmu-miR-667 beg:264 end:285 pic:3' GAACCCGACC-CACCGTCCACAGT 5'& |||| || .||||||. &5' -----GCTGTAGTTTTAGGTGTT- 3' Trim56 mmu-miR-668 beg:476 end:502 pic:3' CCATCACCCGGCTCGGCTCACTGT 5'& |||.| |||| .||. |||| | &5' GGTGG-GGGCGTGGCTCAGTGGTA 3' Trim56 mmu-miR-669c beg:1037 end:1062 pic:3' TGTGTGTAGGTGTGTGTTGATA 5'& ||||||| |||||||| ||.| &5' ACACACACTCACACACACCTGT 3' Trim56 mmu-miR-669e beg:1027 end:1053 pic:3' TAC-TTGTACGTGTGTGTTC-TGT 5'& ||| |.||| |||||||| ||| &5' ATGCAGCAT-CACACACACTCACA 3' Trim56 mmu-miR-669n beg:1037 end:1057 pic:3' TGTGTGTAGGTGTGTGTTTA 5'& ||||||| |||||||| &5' ACACACACTCACACACA--- 3' Trim56 mmu-miR-670 beg:965 end:982 pic:3' AAGTGGTGTATGTGAGTCCCTA 5'& || . ||||||.| &5' -------CAGA-GGTCAGGGGT 3' Trim56 mmu-miR-672 beg:196 end:223 pic:3' AGTGTGTGTCA--TGTGGTTGG-AGT 5'& .||||||| |..|||.| ||| &5' --GCACACAGCAGATGCCAGCAGTCA 3' Trim56 mmu-miR-672 beg:1035 end:1060 pic:3' AGTGTGTGTCA-TGTGGTTGGAGT 5'& ||||||||| |||| |||| &5' TCACACACACTCACACACACCT-- 3' Trim56 mmu-miR-676 beg:892 end:913 pic:3' TCGAGTTGTTGGAGTCCTGCC 5'& .|| ||. .|.||||| || &5' GGC-CAGAGATCTCAGAAC-- 3' Trim56 mmu-miR-676star beg:444 end:454 pic:3' CGTTCAGGATTCCAACATCTCA 5'& ||||||| &5' --------------TGTAGAG- 3' Trim56 mmu-miR-680 beg:347 end:372 pic:3' GGGGGTACAG-TCGTCTACGGG 5'& |.||. ||| |||| ||||. &5' CTCCTCTGTAAAGCACTTGCCT 3' Trim56 mmu-miR-681 beg:666 end:691 pic:3' TCGA-CGGACGGTCGCTCC-GAC 5'& .||| ||||||. | || ||| &5' GGCTAGCCTGCT-GAAAGTCCTG 3' Trim56 mmu-miR-696 beg:199 end:218 pic:3' GGGTGTCGTTCGTGTGCG 5'& |||||||. .| || &5' --CACAGCAGATGCCAGC 3' Trim56 mmu-miR-710 beg:649 end:671 pic:3' GAGTTGAGAGGGGTTCTGAACC 5'& || . |||. ||||||||| &5' CTTGG-TCTTAG-AAGACTTGG 3' Trim56 mmu-miR-743a beg:262 end:287 pic:3' AGATGA-GTCGAA--CCACAGAAAG 5'& ||.|| .||.|| |||||.|| &5' -CTGCTGTAGTTTTAGGTGTTTT-- 3' Trim56 mmu-miR-744star beg:170 end:193 pic:3' TCCAACTC----CAATC-ACCGTTGTC 5'& ||| |||.| ||||||.|| &5' -----GAGTAGTGTTGGCTGGCAATAG 3' Trim56 mmu-miR-758 beg:94 end:113 pic:3' ATCACCTGG-TCCAGTGTTT 5'& ||| |.|| ||| ||. &5' -AGTTGGCCAAGGGCAT--- 3' Trim56 mmu-miR-760 beg:64 end:85 pic:3' AGGGGTGTCTGGGTCTCGGC 5'& | |.||| ||||||| &5' -CATAATAGAAGCAGAGCC- 3' Trim56 mmu-miR-764-5p beg:193 end:203 pic:3' TCCTCCTGTACACTCGTGG 5'& ||||||| &5' -----------TGAGCAC- 3' Trim56 mmu-miR-764-5p beg:419 end:440 pic:3' TC-CTCCTGTACACTCGTGG 5'& || ||||| .| ||.|||. &5' AGTGAGGA-GTCTGGGCAT- 3' Trim56 mmu-miR-872star beg:256 end:277 pic:3' TCCTCCGATGACGTTATCAAGT 5'& |||||.|||| .|||||. &5' ---AGGCTGCTGCTGTAGTTT- 3' Trim56 mmu-miR-877 beg:338 end:358 pic:3' GGGACGCGGTA--GAGGAGATG 5'& | |.|| |||||||. &5' ----GGGTCAGGACTCCTCTG- 3' Trim56 mmu-miR-877star beg:25 end:47 pic:3' ACCCT-CCTCCCTCTTCTCCTGT 5'& |||| |||||||| .||||. &5' -GGGAGGGAGGGAG-GGAGGG-- 3' Trim56 mmu-miR-877star beg:45 end:69 pic:3' ACCCT-CCTCCCTCTTCTCCTGT 5'& |||| |||||||| .||||.|| &5' -GGGAGGGAGGGAG-GGAGGGCA 3' Trim56 mmu-miR-877star beg:1072 end:1096 pic:3' ACCCTC---CTCCCTCTTCTCCTGT 5'& ||||| |||| |.|||||. &5' TGGGAAGCTGAGGC--AGGAGGAT- 3' Trim56 mmu-miR-880 beg:326 end:345 pic:3' AGATGAGTCTCTCCTACCTCAT 5'& |.|| .||||||.|| &5' ---ATTCCT--GGGATGGGGT- 3' Trim56 mmu-miR-93star beg:381 end:400 pic:3' GCCCTTCACGATC-GAGTCGTCA 5'& || || |||||.||| &5' -------TGAGAGACTCAGTAGT 3' Trim56 mmu-miR-1929 beg:438 end:467 pic:3' GAGACGAG--ATATTTCA-----GGATCTT 5'& |||| |.||.|| .|||||| &5' ----GCTCACTGTAGAGGGCTTGTCTAGAA 3' Trim56 mmu-miR-497 beg:251 end:271 pic:3' ATGTTTGGTGTCACACGACGAC 5'& .| |.|.| || |||||||| &5' -GC-AGCTA-AGGCTGCTGCTG 3' Trim56 mmu-miR-345-5p beg:954 end:978 pic:3' TTCGTGACCTGATCCCCAGTCG 5'& |||.|. ||. || |||||| &5' AAGTATGGGGTCAGAGGTCAG- 3'

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Trim56 RAID00070579 mmu-miR-7011-3p miRNA MIMAT0027927 Trim56 mRNA 384309 Prediction 0.1828 Trim56 RAID00081560 mmu-miR-345-5p miRNA MIMAT0000595 Trim56 mRNA 384309 Prediction 0.1828 Trim56 RAID00205073 mmu-miR-33-5p miRNA MIMAT0000667 Trim56 mRNA 384309 Prediction 0.1828 Trim56 RAID00380986 mmu-miR-7035-5p miRNA MIMAT0027974 Trim56 mRNA 384309 Prediction 0.1828 Trim56 RAID00413118 mmu-miR-139-5p miRNA MIMAT0000656 Trim56 mRNA 384309 Prediction 0.1828 Trim56 RAID00608415 mmu-miR-466k miRNA MIMAT0005845 Trim56 mRNA 384309 Prediction 0.1828 Trim56 RAID00616351 mmu-miR-16-5p miRNA MIMAT0000527 Trim56 mRNA 384309 Prediction 0.1828 Trim56 RAID00650124 mmu-miR-29c-3p miRNA MIMAT0000536 Trim56 mRNA 384309 Prediction 0.1828 Trim56 RAID00761024 mmu-miR-365-3p miRNA MIMAT0000711 Trim56 mRNA 384309 Prediction 0.1828 Trim56 RAID00820271 mmu-miR-331-3p miRNA MIMAT0000571 Trim56 mRNA 384309 Prediction 0.1828 Trim56 RAID00938290 mmu-miR-214-3p miRNA MIMAT0000661 Trim56 mRNA 384309 Prediction 0.1828 Trim56 RAID01008399 mmu-miR-6976-3p miRNA MIMAT0027855 Trim56 mRNA 384309 Prediction 0.1828 Trim56 RAID01010638 mmu-miR-290a-5p miRNA MIMAT0000366 Trim56 mRNA 384309 Prediction 0.1828 Trim56 RAID01034417 mmu-miR-1224-3p miRNA MIMAT0017231 Trim56 mRNA 384309 Prediction 0.1828 Trim56 RAID01052797 mmu-miR-449c-5p miRNA MIMAT0003460 Trim56 mRNA 384309 Prediction 0.1828 Trim56 RAID01059764 mmu-miR-203-3p miRNA MIMAT0000236 Trim56 mRNA 384309 Prediction 0.1828 Trim56 RAID01259932 mmu-miR-466i-5p miRNA MIMAT0017325 Trim56 mRNA 384309 Prediction 0.1828 Trim56 RAID01381165 mmu-miR-302a-3p miRNA MIMAT0000380 Trim56 mRNA 384309 CLIP-seq//Prediction 0.6308 Trim56 RAID01427351 mmu-miR-302d-3p miRNA MIMAT0003377 Trim56 mRNA 384309 CLIP-seq//Prediction 0.6308 Trim56 RAID01504717 mmu-miR-1a-3p miRNA MIMAT0000123 Trim56 mRNA 384309 Prediction 0.1828 Trim56 RAID01858493 mmu-miR-195a-5p miRNA MIMAT0000225 Trim56 mRNA 384309 Prediction 0.1828 Trim56 RAID01892471 mmu-miR-145a-5p miRNA MIMAT0000157 Trim56 mRNA 384309 Prediction 0.1828 Trim56 RAID01935047 mmu-miR-182-5p miRNA MIMAT0000211 Trim56 mRNA 384309 Prediction 0.1828 Trim56 RAID02043672 mmu-miR-7054-5p miRNA MIMAT0028012 Trim56 mRNA 384309 Prediction 0.1828 Trim56 RAID02151170 mmu-miR-216a-5p miRNA MIMAT0000662 Trim56 mRNA 384309 Prediction 0.2202 Trim56 RAID02174487 mmu-miR-6999-5p miRNA MIMAT0027900 Trim56 mRNA 384309 Prediction 0.1828 Trim56 RAID02385955 mmu-miR-378c miRNA MIMAT0025138 Trim56 mRNA 384309 Prediction 0.1828 Trim56 RAID02518469 mmu-miR-7051-3p miRNA MIMAT0028007 Trim56 mRNA 384309 Prediction 0.1828 Trim56 RAID02543683 mmu-miR-497a-5p miRNA MIMAT0003453 Trim56 mRNA 384309 Prediction 0.1828 Trim56 RAID02555106 mmu-miR-761 miRNA MIMAT0003893 Trim56 mRNA 384309 Prediction 0.1828 Trim56 RAID02576661 mmu-miR-1306-5p miRNA MIMAT0019136 Trim56 mRNA 384309 Prediction 0.1828 Trim56 RAID02620542 mmu-miR-693-3p miRNA MIMAT0004189 Trim56 mRNA 384309 CLIP-seq 0.5483 Trim56 RAID02625886 mmu-miR-665-3p miRNA MIMAT0003733 Trim56 mRNA 384309 Prediction 0.1828 Trim56 RAID02708384 mmu-miR-670-3p miRNA MIMAT0017242 Trim56 mRNA 384309 Prediction 0.1828 Trim56 RAID02803548 mmu-miR-350-3p miRNA MIMAT0000605 Trim56 mRNA 384309 Prediction 0.1828 Trim56 RAID02853584 mmu-miR-292a-5p miRNA MIMAT0000369 Trim56 mRNA 384309 Prediction 0.1828 Trim56 RAID02978733 mmu-miR-6936-5p miRNA MIMAT0027772 Trim56 mRNA 384309 Prediction 0.1828 Trim56 RAID03052256 mmu-miR-295-3p miRNA MIMAT0000373 Trim56 mRNA 384309 CLIP-seq//Prediction 0.6308 Trim56 RAID03123347 mmu-miR-875-5p miRNA MIMAT0004937 Trim56 mRNA 384309 Prediction 0.1828 Trim56 RAID03158333 mmu-miR-15a-5p miRNA MIMAT0000526 Trim56 mRNA 384309 Prediction 0.1828 Trim56 RAID03171949 mmu-miR-338-3p miRNA MIMAT0000582 Trim56 mRNA 384309 Prediction 0.1828 Trim56 RAID03284988 mmu-miR-486a-5p miRNA MIMAT0003130 Trim56 mRNA 384309 Prediction 0.1828 Trim56 RAID03467798 mmu-miR-504-5p miRNA MIMAT0004889 Trim56 mRNA 384309 Prediction 0.1828 Trim56 RAID03480700 mmu-miR-15b-5p miRNA MIMAT0000124 Trim56 mRNA 384309 Prediction 0.1828 Trim56 RAID03569826 mmu-miR-322-5p miRNA MIMAT0000548 Trim56 mRNA 384309 Prediction 0.1828 Trim56 RAID03573050 mmu-miR-291a-3p miRNA MIMAT0000368 Trim56 mRNA 384309 CLIP-seq//Prediction 0.6308 Trim56 RAID03651176 mmu-miR-466d-5p miRNA MIMAT0004930 Trim56 mRNA 384309 Prediction 0.1828 Trim56 RAID03661095 mmu-miR-105 miRNA MIMAT0004856 Trim56 mRNA 384309 CLIP-seq 0.5483 Trim56 RAID04017486 mmu-miR-302b-3p miRNA MIMAT0003374 Trim56 mRNA 384309 CLIP-seq//Prediction 0.6308 Trim56 RAID04041597 mmu-miR-294-3p miRNA MIMAT0000372 Trim56 mRNA 384309 CLIP-seq//Prediction 0.6308