DNA & RNA Element - AREsite Gene Name Motif CDS Area ARE Area Evidence Usp48; Kiaa4202 ATTTA 177-3335 3555-3559;3763-3767;4412-4416;5645-5649

DNA & RNA Element - miRTarBase Target Gene (Entrez ID) miRTarBase ID miRNA Species (miRNA) Target Gene Species (Target Gene) Experiments Support Type References (PMID) MIRT014589 mmu-miR-149-5p Mus musculus Usp48 170707 Mus musculus Sequencing Functional MTI (Weak) 19536157

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004519 mmu-let-7g* 170707 Usp48 cguuccGUCACCGGAC-AUGUCa |||| | ||| ||||| guggccCAGUUG-CUGAUACAGa 2 17 933 954 [mm9:4:137212992-137213013:+] 0.5233 122 0 -15.19 -0.7608 MIMAT0004523 mmu-miR-29b* 170707 Usp48 auuuggUGGUAUACUUUGGUCg |||| || ||||||| ucaggaACCACAUUAAACCAGa 2 17 1897 1918 [mm9:4:137213956-137213977:+] 0.5042 164 7 -18.85 -0.8751 MIMAT0000152 mmu-miR-140* 170707 Usp48 ggCACCAAGAUGGGACACCAu | ||||:|:::||||||| cuGGGGUUUUGUUCUGUGGUg 2 20 35 55 [mm9:4:137172465-137172485:+] 0.4590 171 7 -29.77 -0.7212 MIMAT0000154 mmu-miR-142-5p 170707 Usp48 ucauCACGAA-AGAUGAAAUAc || :|| | ||||||| uucuGUAUUUAUGAACUUUAUu 2 18 2304 2325 [mm9:4:137214363-137214384:+] 0.5896 148 7 -7.69 -0.9548 MIMAT0004540 mmu-miR-186* 170707 Usp48 ggguuuuuuaaGUGGAAUCCCg || ||||||| ggcugguguggCAGCUUAGGGa 2 12 260 281 [mm9:4:137172690-137172711:+] 0.5004 147 7 -16.73 -0.5186 MIMAT0000217 mmu-miR-188-5p 170707 Usp48 ggGAGGUGGUACGUUC-CCUAc :|:| |:|| |||| |||| auUUUCUCUAU-CAAGUGGAUu 2 20 900 920 [mm9:4:137212959-137212979:+] 0.5045 125 0 -16.63 -0.2006 MIMAT0000218 mmu-miR-24-1* 170707 Usp48 ugacuaUAGUCGA-GUCA-UCCGUg ||:| || | || ||||| auagccAUUAACUCCUGUCAGGCAa 2 18 1554 1578 [mm9:4:137213613-137213637:+] 0.5027 120 0 -12.90 -0.2462 MIMAT0000218 mmu-miR-24-1* 170707 Usp48 ugacUA-UAGU-CGAGUCAUCCGUg || ||:| ||| |||||||| uaaaAUCAUUAUGCUAAGUAGGCAu 2 20 126 150 [mm9:4:137172556-137172580:+] 0.5348 165 7 -19.51 -0.8415 MIMAT0004547 mmu-miR-203* 170707 Usp48 acaacuUGACAGUUCUUGGUGa || |||:||||||| aaagcuACAUUCAGGAACCACa 2 17 1887 1908 [mm9:4:137213946-137213967:+] 0.5042 160 7 -18.20 -0.3558 MIMAT0004572 mmu-miR-290-3p 170707 Usp48 cccGAAUUUUGAUC-CGCCGU-GAAa || :::||:| |:|||| ||| uuaCUGUGGGCUGGUGUGGCAGCUUa 2 22 252 277 [mm9:4:137172682-137172707:+] 0.5176 124 0 -20.59 -0.1364 MIMAT0000367 mmu-miR-291a-5p 170707 Usp48 ucUCUCCCGGAGGUGAA-ACUAc :|| |||: |||| |||| caGGAUAACCUUAACUUCUGAUc 2 21 2009 2031 [mm9:4:137214068-137214090:+] 0.5014 124 0 -11.76 -0.2703 MIMAT0000370 mmu-miR-292-3p 170707 Usp48 ugUGAGUUUUGGAC-CGCCGU-GAAa ||| :::|: | |:|||| ||| uuACUGUGGGCUGGUGUGGCAGCUUa 2 23 252 277 [mm9:4:137172682-137172707:+] 0.5176 121 0 -18.30 -0.1377 MIMAT0004574 mmu-miR-294* 170707 Usp48 ucuAUCCCGGAGGUAA-AACUCa || | ||::||| ||||| auuUAUGAACUUUAUUAUUGAGa 2 20 2310 2332 [mm9:4:137214369-137214391:+] 0.5896 127 0 -11.14 -1.0476 MIMAT0004579 mmu-miR-302a* 170707 Usp48 cguuCAUGUUGGUG-CAAAUUCa || ::|| :: ||||||| cacuGU-UGACGGUAGUUUAAGc 2 19 810 831 [mm9:4:137212869-137212890:+] 0.5172 143 7 -10.15 -0.1563 MIMAT0004583 mmu-miR-130b* 170707 Usp48 ucaucACGUUGUCCCUUUCUCa |||||:: ||||||| auguuUGCAAUGAAGAAAGAGu 2 18 1081 1102 [mm9:4:137213140-137213161:+] 0.5147 161 7 -16.31 -0.3042 MIMAT0004626 mmu-miR-18a* 170707 Usp48 guCUUCCUCGUGAAUC--CCGUCa ||: ||| ||| || ||||| gcGAGCGAGGACUGAGCAGGCAGa 2 21 241 264 [mm9:4:137212300-137212323:+] 0.7691 120 0 -20.11 -0.4777 MIMAT0004628 mmu-miR-21* 170707 Usp48 cuGUCGGGUAGCUGACGACAAc || |: ||| | ||||||| cuCA-CUAAUCCA-UGCUGUUu 2 21 1807 1826 [mm9:4:137213866-137213885:+] 0.5028 152 7 -12.14 -0.1268 MIMAT0005440 mmu-miR-24-2* 170707 Usp48 ugacaAAGUCGAGUCAUCCGUg || ||| |||||||| aaucaUUAUGCUAAGUAGGCAu 2 18 129 150 [mm9:4:137172559-137172580:+] 0.5348 161 7 -18.33 -0.8379 MIMAT0000549 mmu-miR-322* 170707 Usp48 caCAACGUCGCGAAGUACAAa || | ||:| ||||||| gaGUAGGAGUGAAUCAUGUUu 2 20 269 289 [mm9:4:137212328-137212348:+] 0.7691 159 7 -17.57 -0.5612 MIMAT0004640 mmu-miR-325 170707 Usp48 aacuauccuccacGAGUUAUUu :||||||| ccuauacucaucuUUCAAUAAa 2 10 434 455 [mm9:4:137212493-137212514:+] 0.7457 141 7 -7.10 -1.0856 MIMAT0000569 mmu-miR-330* 170707 Usp48 agagacGUCCGGGACA-CGAAACg ||| ::||| |||||| gaaaccCAGAGUUUGUGGCUUUGu 2 18 1357 1380 [mm9:4:137213416-137213439:+] 0.5101 125 6 -16.76 -0.2238 MIMAT0004653 mmu-miR-342-5p 170707 Usp48 gaGUUAGUGUCU---A-UCGUGGGGa || | :|||: | |||||||| agCAUUGGCAGGGCCUCAGCACCCCu 2 21 1386 1411 [mm9:4:137213445-137213470:+] 0.5006 150 7 -25.71 -0.1003 MIMAT0000593 mmu-miR-344 170707 Usp48 ugucaGUCC-GAAACCGAUC-UAGu |||| | | |||||| ||| uguccCAGGACAUGGGCUAGCAUCc 2 19 350 374 [mm9:4:137212409-137212433:+] 0.7574 129 0 -19.08 -0.1147 MIMAT0004704 mmu-miR-335-3p 170707 Usp48 ccaguccucguUAU-UACUUUUu :|| ||||||| guugcaaaaauGUAUAUGAAAAa 2 12 71 93 [mm9:4:137172501-137172523:+] 0.5035 142 7 -7.40 -1.0990 MIMAT0001090 mmu-miR-409-3p 170707 Usp48 uccccaaGUGGCU--CGUUGUAAg ::|:|| ||||||| guauacaUGCUGAUCUCAACAUUg 2 16 1003 1026 [mm9:4:137213062-137213085:+] 0.5233 142 7 -10.08 -0.1083 MIMAT0004753 mmu-miR-431* 170707 Usp48 ucuucggGACGUUCUGCUG-GAc :| ||:|||||| || ---gauaUUCCAGGACGACACUa 2 16 1 20 [mm9:4:137172431-137172450:+] 0.7112 123 0 -15.90 -0.7908 MIMAT0002107 mmu-miR-466a-3p 170707 Usp48 agAAUACAC-ACGCACAUACAUAu ||| || ||| |||||| cuUUACCUGUUGCAAAAAUGUAUa 2 22 63 86 [mm9:4:137172493-137172516:+] 0.5035 124 6 -9.82 -0.1347 MIMAT0002108 mmu-miR-467a-1* 170707 Usp48 cacauccacacACAUACAUAUa || ||||||| aaaacuuuaaaUG-AUGUAUAc 2 12 988 1008 [mm9:4:137213047-137213067:+] 0.5233 141 7 -5.82 -0.2635 MIMAT0002108 mmu-miR-467a-1* 170707 Usp48 cacauccacacacaUACAUAUa ||||||| uaccuguugcaaaaAUGUAUAu 2 9 66 87 [mm9:4:137172496-137172517:+] 0.5035 140 7 -6.84 -0.9853 MIMAT0002110 mmu-miR-469 170707 Usp48 ccUGUGGUUCUAG--UUACUUUCUCCGu | ||| | || | ||||||| aaAAACCCAUUUCCUCCUCUAAGAGGCc 2 25 89 116 [mm9:4:137172519-137172546:+] 0.5414 143 7 -14.59 -0.6090 MIMAT0002110 mmu-miR-469 170707 Usp48 ccUGUGGUUCUAGU--UAC-UUUC-UCCGu |: |:|| |||| ||| ||| |||| uuAUUCUAAAAUCAUUAUGCUAAGUAGGCa 2 25 120 149 [mm9:4:137172550-137172579:+] 0.5348 130 0 -16.41 -0.9577 MIMAT0004781 mmu-miR-532-3p 170707 Usp48 acguucgGAACCCACACCCUCc :|| | ||||||| uuuucuaUUUAAG-GUGGGAGg 2 16 214 234 [mm9:4:137212273-137212293:+] 0.7691 141 7 -18.10 -0.3421 MIMAT0004781 mmu-miR-532-3p 170707 Usp48 acguucggaacccaCACCCUCc ||||||| aggaccuuuucaaaGUGGGAGg 2 9 174 195 [mm9:4:137172604-137172625:+] 0.5348 140 7 -21.53 -0.5534 MIMAT0003120 mmu-miR-483* 170707 Usp48 uucugcccUCCCCUCCUCACu || | ||||||| gcagagcaAGAGUAGGAGUGa 2 14 260 280 [mm9:4:137212319-137212339:+] 0.7691 149 7 -18.11 -0.9199 MIMAT0003120 mmu-miR-483* 170707 Usp48 uucugcccuccccUCCUCACu ||||||| ucgcugacugccaAGGAGUGa 2 9 12 32 [mm9:4:137212071-137212091:+] 0.7691 140 7 -15.04 -1.1973 MIMAT0003166 mmu-miR-546 170707 Usp48 cugAGGCACGGUGGUa | | |||||||| aagUGCUUGCCACCAa 2 14 284 299 [mm9:4:137172714-137172729:+] 0.5005 149 7 -14.99 -0.6441 MIMAT0003189 mmu-miR-291b-5p 170707 Usp48 ccUCUCCCGGAGGUGAA-ACUAg :|| |||: |||| |||| caGGAUAACCUUAACUUCUGAUc 2 21 2009 2031 [mm9:4:137214068-137214090:+] 0.5014 124 0 -15.93 -0.2703 MIMAT0003732 mmu-miR-668 170707 Usp48 ccaucaccCGGCUCGGCUCACUGu ||| || ||||||| cgcugacuGCCAAG--GAGUGACc 2 17 13 34 [mm9:4:137212072-137212093:+] 0.7691 149 7 -18.62 -0.9056 MIMAT0003735 mmu-miR-672 170707 Usp48 agUGUGUGUCAUGUGGUU-GGAGu ||| | | : ||||| |||| ccACAGAAAUGGGACCAAGCCUCa 2 22 1248 1271 [mm9:4:137213307-137213330:+] 0.5219 125 0 -21.52 -0.1360 MIMAT0003896 mmu-miR-763 170707 Usp48 cgGUGACCAAGAAGGGUCGACc ||:| | ||| ||||||| ugCAUUUGGACUUACCAGCUGc 2 21 1775 1796 [mm9:4:137213834-137213855:+] 0.4997 164 7 -21.45 -0.1850 MIMAT0003897 mmu-miR-759 170707 Usp48 caGUUUUA--A--CAAACGUGAGACg ::|||| | || |||||||| aaUGAAAUCCUAAGUCAGCACUCUGc 2 21 205 230 [mm9:4:137172635-137172660:+] 0.5348 150 7 -18.51 -0.3337 MIMAT0003741 mmu-miR-674* 170707 Usp48 aacAAGACUCU-ACCCU-CGACAc ||:| | | ||||| ||||| accUUUUCAAAGUGGGAGGCUGUu 2 20 177 200 [mm9:4:137172607-137172630:+] 0.5348 130 0 -17.18 -0.4494 MIMAT0003454 mmu-miR-423-3p 170707 Usp48 ugacuccCCGGAGUCUGGCUCGa | |||: ||||||| cagaucuGUCCUU-UACCGAGCa 2 17 1226 1247 [mm9:4:137213285-137213306:+] 0.5242 146 7 -20.19 -0.3987 MIMAT0003457 mmu-miR-680 170707 Usp48 ggGGGUACAGUC------GUCUACGGg ||| ||||| |||||||| agCCCUGGUCAGUCCACACAGAUGCCc 2 20 305 331 [mm9:4:137212364-137212390:+] 0.7691 150 7 -30.77 -0.1764 MIMAT0003458 mmu-miR-681 170707 Usp48 ucgacggaCGGUCGCUCC-GAc || ||||||| || gggagaggGCGAGCGAGGACUg 2 14 233 254 [mm9:4:137212292-137212313:+] 0.7691 121 0 -23.06 -0.1702 MIMAT0003466 mmu-miR-687 170707 Usp48 aguaacgACGUAAGGUCCUAUc ||:| |||||||| cucacuaUGUA-ACCAGGAUAa 2 16 1996 2016 [mm9:4:137214055-137214075:+] 0.5014 149 7 -15.46 -0.2369 MIMAT0003470 mmu-miR-691 170707 Usp48 aaAAGACGGAGA-G-AAGUCCUUa |||| || | |||||||| ggUUCUAAAGCUACAUUCAGGAAc 2 21 1881 1904 [mm9:4:137213940-137213963:+] 0.5042 150 7 -15.30 -0.2196 MIMAT0003471 mmu-miR-692 170707 Usp48 cucacuccGCGAG-UUUCUCUa | :|| ||||||| caaaaaucCAUUCAAAAGAGAc 2 14 120 141 [mm9:4:137212179-137212200:+] 0.7691 144 7 -9.25 -0.8451 MIMAT0003472 mmu-miR-693-5p 170707 Usp48 cuuuugaaagccuACACCGAc ||||||| gaaacccagaguuUGUGGCUu 2 9 1357 1377 [mm9:4:137213416-137213436:+] 0.5101 140 7 -12.31 -0.3818 MIMAT0003472 mmu-miR-693-5p 170707 Usp48 cuUUUGAAAGCCUACA-CCGAc |:|||||: ||| |||| gaAGACUUUU-ACUGUGGGCUg 2 20 244 264 [mm9:4:137172674-137172694:+] 0.5176 121 0 -20.14 -0.1964 MIMAT0003474 mmu-miR-694 170707 Usp48 gaAGUCCGU-UGUA-AAAGUc | | ||| |||| ||||| cuUGAAGCAGACAUAUUUCAa 2 18 1748 1768 [mm9:4:137213807-137213827:+] 0.4997 124 0 -9.49 -0.2442 MIMAT0003478 mmu-miR-467b* 170707 Usp48 cacaaccacacACAUACAUAUa || ||||||| aaaacuuuaaaUG-AUGUAUAc 2 12 988 1008 [mm9:4:137213047-137213067:+] 0.5233 141 7 -5.82 -0.2635 MIMAT0003478 mmu-miR-467b* 170707 Usp48 cacaACCACACACAUACAUAUa || || ||||||| uaccUGUUGCAAAAAUGUAUAu 2 19 66 87 [mm9:4:137172496-137172517:+] 0.5035 142 7 -9.48 -0.9853 MIMAT0004827 mmu-miR-297b-3p 170707 Usp48 auacccauacacacaUACAUAu |||||| uuaccuguugcaaaaAUGUAUa 2 8 65 86 [mm9:4:137172495-137172516:+] 0.5035 120 6 -5.93 -0.1374 MIMAT0003493 mmu-miR-703 170707 Usp48 aagaaaggaagacUUCCAAAa ||||||| gcucgaacagaaaAAGGUUUu 2 9 845 865 [mm9:4:137212904-137212924:+] 0.5172 140 7 -7.52 -0.2319 MIMAT0003495 mmu-miR-705 170707 Usp48 acggGUGGGGUGGAG-GGUGg ::|::| |||| |||| ggugUGCUUCCCCUCACCACa 2 17 380 400 [mm9:4:137172810-137172830:+] 0.5005 120 0 -22.23 -0.2984 MIMAT0003499 mmu-miR-709 170707 Usp48 aggaggacggaGACGGAGg ||||||| uacagggugugCUGCCUCa 2 9 779 797 [mm9:4:137212838-137212856:+] 0.5172 140 7 -17.37 -0.1897 MIMAT0003500 mmu-miR-710 170707 Usp48 gaguugagagggguUCUGAACc ||||||| cacugaugggcaucAGACUUGa 2 9 177 198 [mm9:4:137212236-137212257:+] 0.7691 140 7 -12.62 -0.7209 MIMAT0003502 mmu-miR-712 170707 Usp48 ccAUGGCGGGC--CCACUUCCUc || || :| |||||||| aaUAAAGCAUGAACGUGAAGGAc 2 20 450 472 [mm9:4:137212509-137212531:+] 0.7084 146 7 -14.95 -0.1913 MIMAT0003502 mmu-miR-712 170707 Usp48 ccauggcgggcccACUUCCUc ||||||| ugggcaucagacuUGAAGGAc 2 9 183 203 [mm9:4:137212242-137212262:+] 0.7691 140 7 -12.53 -0.5754 MIMAT0003508 mmu-miR-501-5p 170707 Usp48 aaagUGGGUCCCUGUUUCCUaa || :| ||| |||||| cagaACAUAAGGAAAAAGGAca 3 19 409 430 [mm9:4:137172839-137172860:+] 0.5011 142 0 -12.98 -0.1480 MIMAT0003781 mmu-miR-676* 170707 Usp48 cgUUCAGGAUUCCAACAUCUCa ||| | || | ||||||| ccAAG--CAAAUG-UGUAGAGu 2 21 2203 2221 [mm9:4:137214262-137214280:+] 0.5321 147 7 -15.30 -0.1458 MIMAT0003781 mmu-miR-676* 170707 Usp48 cgUUCAGGAUUCCAAC-AUCUCa |||| :||| || ||||| caAAGU-GGGAGGCUGUUAGAGa 2 21 184 205 [mm9:4:137172614-137172635:+] 0.5348 122 0 -15.16 -0.8915 MIMAT0003782 mmu-miR-676 170707 Usp48 ucgagUUGUUGGAGUCCUGCc :|:| :| ||||||| -----GAUAUUC-CAGGACGa 2 17 1 15 [mm9:4:137172431-137172445:+] 0.7112 146 7 -15.35 -0.4714 MIMAT0004838 mmu-miR-742* 170707 Usp48 acuaaUCGUUGGUACA-CUCAu ||||| ::||| |||| acccaAGCAAAUGUGUAGAGUc 2 17 2201 2222 [mm9:4:137214260-137214281:+] 0.5321 128 0 -14.20 -0.2612 MIMAT0004842 mmu-miR-879 170707 Usp48 ccgaaucucgauaUUCGGAGa ||||||| cagaaaugggaccAAGCCUCa 2 9 1251 1271 [mm9:4:137213310-137213330:+] 0.5219 140 7 -12.89 -0.1391 MIMAT0004850 mmu-miR-883b-5p 170707 Usp48 acugacgAUGGGUAAGAGUCAu |: |:: ||||||| aagccagUGACUG-UCUCAGUu 2 16 573 593 [mm9:4:137212632-137212652:+] 0.5053 141 7 -16.57 -0.1105 MIMAT0004856 mmu-miR-105 170707 Usp48 ugGUGUUCG---UAGACUCGUGA-ACc ||||||| | | |||||| || ugCACAAGCCAGAAGUUAGCACUGUGa 2 22 1476 1502 [mm9:4:137213535-137213561:+] 0.5017 128 0 -19.96 -0.1632 MIMAT0004863 mmu-miR-220 170707 Usp48 uuCACAGACUGUGACACCACc | ||:| :: |||||||| ugGGGUUUUGUUCUGUGGUGu 2 20 36 56 [mm9:4:137172466-137172486:+] 0.4590 159 7 -19.13 -0.4910 MIMAT0004863 mmu-miR-220 170707 Usp48 uucacaGACUGU-GACACCACc ||| || ||||||| uuuuuaCUGCCAGAUGUGGUG- 2 16 431 451 [mm9:4:137172861-137172881:+] 0.5011 150 7 -17.20 -0.1582 MIMAT0004864 mmu-miR-297a* 170707 Usp48 auacccauacacacaUACAUAu |||||| uuaccuguugcaaaaAUGUAUa 2 8 65 86 [mm9:4:137172495-137172516:+] 0.5035 120 6 -5.93 -0.1374 MIMAT0004866 mmu-miR-297c* 170707 Usp48 auacccauacacacaUACAUAu |||||| uuaccuguugcaaaaAUGUAUa 2 8 65 86 [mm9:4:137172495-137172516:+] 0.5035 120 6 -5.93 -0.1374 MIMAT0004876 mmu-miR-466b-3p 170707 Usp48 agAAUACAC-ACGCACAUACAUAu ||| || ||| |||||| cuUUACCUGUUGCAAAAAUGUAUa 2 22 63 86 [mm9:4:137172493-137172516:+] 0.5035 124 6 -9.82 -0.1347 MIMAT0005453 mmu-miR-466b-3-3p 170707 Usp48 agAAUACAC-ACGCACAUACAUAa ||| || ||| |||||| cuUUACCUGUUGCAAAAAUGUAUa 2 22 63 86 [mm9:4:137172493-137172516:+] 0.5035 124 6 -7.56 -0.1347 MIMAT0004878 mmu-miR-466c-3p 170707 Usp48 agAAUACAC-ACGCACAUACAUAu ||| || ||| |||||| cuUUACCUGUUGCAAAAAUGUAUa 2 22 63 86 [mm9:4:137172493-137172516:+] 0.5035 124 6 -9.82 -0.1347 MIMAT0004880 mmu-miR-466e-3p 170707 Usp48 agAAUACAC-ACGCACAUACAUAu ||| || ||| |||||| cuUUACCUGUUGCAAAAAUGUAUa 2 22 63 86 [mm9:4:137172493-137172516:+] 0.5035 124 6 -9.82 -0.1347 MIMAT0004887 mmu-miR-467d* 170707 Usp48 cacauccacacACAUACAUAUa || ||||||| aaaacuuuaaaUG-AUGUAUAc 2 12 988 1008 [mm9:4:137213047-137213067:+] 0.5233 141 7 -5.82 -0.2635 MIMAT0004887 mmu-miR-467d* 170707 Usp48 cacauccacacacaUACAUAUa ||||||| uaccuguugcaaaaAUGUAUAu 2 9 66 87 [mm9:4:137172496-137172517:+] 0.5035 140 7 -6.84 -0.9853 MIMAT0004898 mmu-miR-654-3p 170707 Usp48 uuccacuaccagUCGUCUGUAu ||||||||| cucacagcuugaAGCAGACAUa 2 11 1741 1762 [mm9:4:137213800-137213821:+] 0.4997 150 7 -15.61 -0.3592 MIMAT0004898 mmu-miR-654-3p 170707 Usp48 uuccacuaccaGUCGUCUGUAu :| ||||||| uuuuuugccacUACCAGACAUg 2 12 2238 2259 [mm9:4:137214297-137214318:+] 0.5608 143 7 -10.86 -0.1315 MIMAT0004930 mmu-miR-466d-5p 170707 Usp48 guacauguacaUGCGUGUGUGu || ||||||| uuccccucaccACACACACACa 2 12 387 408 [mm9:4:137172817-137172838:+] 0.5005 147 7 -15.98 -0.6332 MIMAT0004931 mmu-miR-466d-3p 170707 Usp48 gauacacacgcacaUACAUAu |||||| uaccuguugcaaaaAUGUAUa 2 8 66 86 [mm9:4:137172496-137172516:+] 0.5035 120 6 -9.62 -0.1347 MIMAT0004934 mmu-miR-872 170707 Usp48 ggacuugAUU-GUUC-AUUGGAa ||| ||:| |||||| cacuaugUAACCAGGAUAACCUu 2 15 1998 2020 [mm9:4:137214057-137214079:+] 0.5014 121 6 -13.03 -0.1432 MIMAT0004934 mmu-miR-872 170707 Usp48 ggacuugauuguucAUUGGAa |||||| acccagccuuuauuUAACCUa 2 8 417 437 [mm9:4:137212476-137212496:+] 0.7457 120 6 -9.00 -0.1600 MIMAT0004861 mmu-miR-877 170707 Usp48 gggacgcGGUA---GAGGAGAUg |||| |||||||| gaaaaacCCAUUUCCUCCUCUAa 2 14 88 110 [mm9:4:137172518-137172540:+] 0.5414 148 7 -18.10 -0.7533 MIMAT0005294 mmu-miR-467e* 170707 Usp48 uauauccacacACAUACAUAUa || ||||||| aaaacuuuaaaUG-AUGUAUAc 2 12 988 1008 [mm9:4:137213047-137213067:+] 0.5233 141 7 -5.82 -0.2635 MIMAT0005294 mmu-miR-467e* 170707 Usp48 uauauccacacacaUACAUAUa ||||||| uaccuguugcaaaaAUGUAUAu 2 9 66 87 [mm9:4:137172496-137172517:+] 0.5035 140 7 -6.84 -0.9853 MIMAT0005830 mmu-miR-466l 170707 Usp48 uuauACACACGUACAUAAAUAu | | | | ||||||||| aacuUCUUUUC-UGUAUUUAUg 2 19 2296 2316 [mm9:4:137214355-137214375:+] 0.5896 152 7 -9.00 -0.3771 MIMAT0005832 mmu-miR-669g 170707 Usp48 uaguaCAGUUGUGUAUGU-UACGu ||||:: || ||| |||| cccugGUCAGUCCACACAGAUGCc 2 19 307 330 [mm9:4:137212366-137212389:+] 0.7691 130 0 -16.11 -0.1680 MIMAT0005836 mmu-miR-1186 170707 Usp48 guacggaaAUUAAGGUCGUGAg ||| | ||||||| ugaaauccUAAGU-CAGCACUc 2 15 207 227 [mm9:4:137172637-137172657:+] 0.5348 148 7 -19.16 -0.6274 MIMAT0005839 mmu-miR-669f 170707 Usp48 uaugcacacacacaUACAUAUAc :||||||| ccccagcucuacccGUGUAUAUu 2 10 2162 2184 [mm9:4:137214221-137214243:+] 0.5165 141 7 -5.56 -0.1318 MIMAT0005839 mmu-miR-669f 170707 Usp48 uaUGCAC-ACACACAUACAUAUAc || || || |||||||| uuACCUGUUGCAAAAAUGUAUAUg 2 22 65 88 [mm9:4:137172495-137172518:+] 0.5035 148 7 -13.05 -0.9348 MIMAT0005845 mmu-miR-466k 170707 Usp48 aguguacauGUACAUGUGUGUGu || |||||||| uccccucacCACACACACACACa 2 15 388 410 [mm9:4:137172818-137172840:+] 0.5005 146 7 -17.61 -0.6669 MIMAT0005846 mmu-miR-467f 170707 Usp48 acaUCCACACACACACAUAUa || | | ||||||| cccAGCUCUACCCGUGUAUAu 2 19 2163 2183 [mm9:4:137214222-137214242:+] 0.5165 142 7 -7.98 -0.1657 MIMAT0005849 mmu-miR-1191 170707 Usp48 aucccgauguaucAUUCUGAc ||||||| uuuugaaaacccuUAAGACUa 2 9 758 778 [mm9:4:137212817-137212837:+] 0.5253 140 7 -5.89 -0.5121 MIMAT0005854 mmu-miR-467g 170707 Usp48 uauauacacacacaUACAUAu |||||| uaccuguugcaaaaAUGUAUa 2 8 66 86 [mm9:4:137172496-137172516:+] 0.5035 120 6 -5.93 -0.1347 MIMAT0005859 mmu-miR-1198 170707 Usp48 ggUUCG--GUCGGUCCUU-GUGUAu |||| || :|||||| ||||| uaAAGCUACAUUCAGGAACCACAUu 2 21 1886 1910 [mm9:4:137213945-137213969:+] 0.5042 139 0 -22.42 -0.2675 MIMAT0007870 mmu-miR-1900 170707 Usp48 acuuCCUGGUCUCUCCCGC-CGg ||: :||||||||| || agguGGGAGGGAGAGGGCGAGCg 2 19 225 247 [mm9:4:137212284-137212306:+] 0.7691 130 0 -30.59 -0.2724 MIMAT0007872 mmu-miR-1906 170707 Usp48 ucGGGACGGA-GUCCGAC-GACGu |::|| || | |||| |||| -uCUUUGACUACUCGCUGACUGCc 2 21 1 23 [mm9:4:137212060-137212082:+] 0.7550 123 0 -18.47 -0.6125 MIMAT0007873 mmu-miR-1896 170707 Usp48 gagGAG--UGGGUGGUAG-UCUCUc ||| | : |||:|| ||||| aaaCUCCAAGUGACCGUCUAGAGAc 2 20 381 405 [mm9:4:137212440-137212464:+] 0.7457 122 0 -23.35 -0.5206 MIMAT0009392 mmu-miR-1929 170707 Usp48 gagACGAGAUAUUUCAGG-AUCUu || ||| || |||| |||| aaaUGGUCUUUACUGUCCUUAGAa 2 21 1332 1355 [mm9:4:137213391-137213414:+] 0.5196 132 0 -17.18 -0.4346 MIMAT0009398 mmu-miR-1934 170707 Usp48 ucuccUGCUUCGUCCCCUGGUCu :| ||| | | |||||| ugacuGCCAAGGA-GUGACCAGa 2 19 16 37 [mm9:4:137212075-137212096:+] 0.7691 124 6 -19.85 -0.1452 MIMAT0009404 mmu-miR-1940 170707 Usp48 uugacgaggUGGAAGAGUC---AGGAGGUa ||: |||||| ||||||| aagccagugACUGUCUCAGUUUUCCUCCAu 2 19 573 602 [mm9:4:137212632-137212661:+] 0.5053 161 7 -26.80 -0.3721 MIMAT0009407 mmu-miR-1942 170707 Usp48 guugguCUACUUCUGUA-GACu |||| | |||| ||| uuaaauGAUGUAUACAUGCUGa 2 16 994 1015 [mm9:4:137213053-137213074:+] 0.5233 123 0 -12.89 -0.7277 MIMAT0009411 mmu-miR-1306 170707 Usp48 guagugguggucuCGGUUGCa ||||||| acgugaaggacuuGCCAACGa 2 9 462 482 [mm9:4:137212521-137212541:+] 0.7084 140 7 -16.91 -0.7722 MIMAT0009419 mmu-miR-669m 170707 Usp48 uauacAAACACACCUACAUAUa ||| | |||||||| aaaacUUUAAAU-GAUGUAUAc 2 18 988 1008 [mm9:4:137213047-137213067:+] 0.5233 147 7 -7.45 -0.2795 MIMAT0009419 mmu-miR-669m 170707 Usp48 uauACAAACACACCUACAUAUa || ||| ||||||| accUG-UUGCAAAAAUGUAUAu 2 20 67 87 [mm9:4:137172497-137172517:+] 0.5035 141 7 -8.38 -0.9823 MIMAT0009423 mmu-miR-1952 170707 Usp48 guCUUCCUCCCACCUCu || | ||||||| agGACACAUGGUGGAGg 2 16 326 342 [mm9:4:137172756-137172772:+] 0.5005 143 7 -17.48 -0.1358 MIMAT0009424 mmu-miR-1953 170707 Usp48 gucuucggacucuuGAAAGGGu ||||||| accaagagcccacuCUUUCCCa 2 9 1275 1296 [mm9:4:137213334-137213355:+] 0.5196 140 7 -20.55 -0.2183 MIMAT0009424 mmu-miR-1953 170707 Usp48 gucuucggacucuuGAAAGGGu ||||||| uauguuuccuuuuuCUUUCCCa 2 9 1940 1961 [mm9:4:137213999-137214020:+] 0.5014 140 7 -16.69 -0.5830 MIMAT0009431 mmu-miR-1958 170707 Usp48 ugaAUGACGAAGGU-GAAA-GGAu |: ||:||::| |||| ||| cugUGGUGUUUUUAUCUUUACCUg 2 20 48 71 [mm9:4:137172478-137172501:+] 0.4590 126 0 -16.24 -0.7376 MIMAT0009446 mmu-miR-1971 170707 Usp48 agaGUCGGGUCGGAAAUg :| ||||||||||| ugcUAACCCAGCCUUUAu 2 16 412 429 [mm9:4:137212471-137212488:+] 0.7457 163 7 -23.07 -0.8626 MIMAT0009458 mmu-miR-1981 170707 Usp48 cggugcaGAUUCGGGUCGGAAAUg |||| ||||||||||| agaucugCUAA-CCCAGCCUUUAu 2 18 407 429 [mm9:4:137212466-137212488:+] 0.7457 171 7 -25.87 -0.8556 MIMAT0011222 mmu-miR-2146 170707 Usp48 guguaccUUGGGAAGA-GGUg ||||:|||| ||| cacuguuAACCUUUCUGCCAa 2 14 2335 2355 [mm9:4:137214394-137214414:+] 0.5896 125 0 -18.94 -1.0811 MIMAT0012771 mmu-miR-432 170707 Usp48 gaCGGGUGACUAG--AUGAGGUUCu || : ||| || |||||||| uaGCAUCCUGCUCCAAACUCCAAGu 2 22 367 391 [mm9:4:137212426-137212450:+] 0.7574 156 7 -21.61 -0.5265 MIMAT0012771 mmu-miR-432 170707 Usp48 gaCGGGUGACUAGAUGA-GGUUCu | |:||| : : ||| ||||| uuGACUACUCGCUGACUGCCAAGg 2 22 4 27 [mm9:4:137212063-137212086:+] 0.7691 125 0 -25.04 -0.4855 MIMAT0015640 mmu-miR-3470a 170707 Usp48 ggucggaccAGAUGUUUCACu |:| ||||||| aaaaggaccUUUUCAAAGUGg 2 13 171 191 [mm9:4:137172601-137172621:+] 0.5348 148 7 -14.13 -0.5771 MIMAT0015646 mmu-miR-3474 170707 Usp48 cuuAGGUGCAGAGGAGGGUCCc ||| : |: ::||||||| guuUCCUUUUUCUUUCCCAGGc 2 20 1943 1964 [mm9:4:137214002-137214023:+] 0.5014 155 7 -20.23 -0.2075 MIMAT0015646 mmu-miR-3474 170707 Usp48 cuuaggugcAGA-GGAGGGUCCc ||| : ||||||| acuagcggaUCUGUGUCCCAGGa 2 14 337 359 [mm9:4:137212396-137212418:+] 0.7691 144 7 -20.69 -0.2177 MIMAT0000126 mmu-miR-27b 170707 Usp48 cgucUUGAAUC--GGUGAC-ACUu |||| || :||||| ||| caccAACUCAGGAUCACUGUUGAc 2 18 796 819 [mm9:4:137212855-137212878:+] 0.5172 124 0 -13.84 -0.1056 MIMAT0000128 mmu-miR-30a 170707 Usp48 gaaggUCAGCUCCUACAAAUGu ||| | |||||||| guaggAGUGAAUCAUGUUUACa 2 18 271 292 [mm9:4:137212330-137212351:+] 0.7691 153 7 -14.92 -0.7602 MIMAT0000130 mmu-miR-30b 170707 Usp48 ucgaCUCACAUCCUACAAAUGu ||||| | |||||||| guagGAGUGAAUCAUGUUUACa 2 19 271 292 [mm9:4:137212330-137212351:+] 0.7691 166 7 -18.15 -0.7528 MIMAT0000140 mmu-miR-128 170707 Usp48 uuUCUCUGGCCAAGUGACACu ||| ::: | ||||||| ccAGAAGUUAG--CACUGUGa 2 20 1484 1502 [mm9:4:137213543-137213561:+] 0.5017 144 7 -15.80 -0.2004 MIMAT0000141 mmu-miR-130a 170707 Usp48 uacgggaaaauUGUAACGUGAc | |||||||| ucaaauaaagcAGAUUGCACUg 2 12 160 181 [mm9:4:137212219-137212240:+] 0.7691 147 7 -14.17 -0.4273 MIMAT0000153 mmu-miR-141 170707 Usp48 gguagaaauggucuGUCACAAu ||||||| ggauaggaaauguuCAGUGUUc 2 9 613 634 [mm9:4:137212672-137212693:+] 0.5371 140 7 -9.36 -0.1173 MIMAT0000162 mmu-miR-152 170707 Usp48 gguucaagacaguACGUGACu ||||||| aaauaaagcagauUGCACUGa 2 9 162 182 [mm9:4:137212221-137212241:+] 0.7691 140 7 -12.44 -0.8835 MIMAT0000164 mmu-miR-154 170707 Usp48 gcuUCCGUUGUGCCUAUUGGAu | |:||| ||||||||| acuAUGUAACCAGGAUAACCUu 2 20 1999 2020 [mm9:4:137214058-137214079:+] 0.5014 167 7 -20.42 -0.1183 MIMAT0000164 mmu-miR-154 170707 Usp48 gcuuccguugugccuAUUGGAu |||||| aacccagccuuuauuUAACCUa 2 8 416 437 [mm9:4:137212475-137212496:+] 0.7457 120 6 -10.26 -0.1569 MIMAT0000208 mmu-miR-10b 170707 Usp48 guguuuaagccaAGAUGUCCCAu | |||||||| aacccuuaagacUAUACAGGGUg 2 12 765 787 [mm9:4:137212824-137212846:+] 0.5253 147 7 -14.88 -0.2519 MIMAT0000209 mmu-miR-129-5p 170707 Usp48 cguucgGGUCUGGCGUUUUUc || | ::||||||| ucuuuaCCUG-UUGCAAAAAu 2 16 62 81 [mm9:4:137172492-137172511:+] 0.5035 145 7 -10.49 -0.9352 MIMAT0000211 mmu-miR-182 170707 Usp48 gccacacucaagaugguAACGGUUu ||||||| gcaugaacgugaaggacUUGCCAAc 2 9 456 480 [mm9:4:137212515-137212539:+] 0.7084 140 7 -11.55 -0.1509 MIMAT0000211 mmu-miR-182 170707 Usp48 gccacacucaagaugguaACGGUUu |||||| aaucacuguuaaccuuucUGCCAAa 2 8 2332 2356 [mm9:4:137214391-137214415:+] 0.5896 120 6 -13.02 -0.1079 MIMAT0000212 mmu-miR-183 170707 Usp48 ucACUUAAGAUGGUC-ACGGUAu ||:| | |||||| |||||| uuUGGACU-UACCAGCUGCCAUg 2 21 1779 1800 [mm9:4:137213838-137213859:+] 0.5013 138 6 -22.65 -0.1410 MIMAT0000215 mmu-miR-186 170707 Usp48 ucggguuuuccucuUAAGAAAc ||||||| guauauuucuagucAUUCUUUa 2 9 2178 2199 [mm9:4:137214237-137214258:+] 0.5321 140 7 -5.38 -0.4726 MIMAT0000247 mmu-miR-143 170707 Usp48 cuCGAUGUCACGAAGUAGAGu |:| : | | ||||||| caGUUUUCCUCCAUCAUCUCa 2 20 589 609 [mm9:4:137212648-137212668:+] 0.5053 147 7 -13.02 -0.2535 MIMAT0000248 mmu-miR-30e 170707 Usp48 gaaggUCAGUUCCUACAAAUGu ||| || |||||||| guaggAGUGAAUCAUGUUUACa 2 18 271 292 [mm9:4:137212330-137212351:+] 0.7691 161 7 -14.13 -0.7528 MIMAT0004577 mmu-miR-299 170707 Usp48 uucGCCAAAUGGCAGGGUGUAu | | |||:| ||||||| auuCUGCAUACUGACCCACAUc 2 20 2141 2162 [mm9:4:137214200-137214221:+] 0.5009 159 7 -17.35 -0.1345 MIMAT0000379 mmu-miR-301a 170707 Usp48 cgaaacUGUUAUG-AUAACGUGAc |:|| :| |||||||| ugucaaAUAAAGCAGAUUGCACUg 2 18 158 181 [mm9:4:137212217-137212240:+] 0.7691 152 7 -15.54 -0.4177 MIMAT0000380 mmu-miR-302a 170707 Usp48 agUGGUUUUGUACCUUC-GUGAAu :||||| :| ||| ||||| cuGCCAAAUUA---AAGACACUUg 2 22 2349 2369 [mm9:4:137214408-137214428:+] 0.5896 121 0 -12.76 -0.5750 MIMAT0000387 mmu-miR-130b 170707 Usp48 uacgggaaaguagUAACGUGAc |||||||| ucaaauaaagcagAUUGCACUg 2 10 160 181 [mm9:4:137212219-137212240:+] 0.7691 145 7 -15.75 -0.4241 MIMAT0000514 mmu-miR-30c 170707 Usp48 cgACUCUCACAUCCUACAAAUGu | :||||| | |||||||| agUAGGAGUGAAUCAUGUUUACa 2 22 270 292 [mm9:4:137212329-137212351:+] 0.7691 169 7 -18.24 -0.7528 MIMAT0000515 mmu-miR-30d 170707 Usp48 gaaggucagccccUACAAAUGu |||||||| guaggagugaaucAUGUUUACa 2 10 271 292 [mm9:4:137212330-137212351:+] 0.7691 145 7 -12.93 -0.7638 MIMAT0000516 mmu-miR-148a 170707 Usp48 ugUUUCAAGACAUCACGUGACu |||| | | | ||||||| auAAAG--CAG-AUUGCACUGa 2 21 164 182 [mm9:4:137212223-137212241:+] 0.7691 147 7 -14.36 -0.8835 MIMAT0000519 mmu-miR-200a 170707 Usp48 ugUAGCAAUGGUCUGUCACAAu || | | :: ||||||| ggAUAGGAAAUGUUCAGUGUUc 2 21 613 634 [mm9:4:137212672-137212693:+] 0.5371 144 7 -9.36 -0.1161 MIMAT0000531 mmu-miR-22 170707 Usp48 ugucaagaaguugACCGUCGAa |||||||| cugugggcuggugUGGCAGCUu 2 10 255 276 [mm9:4:137172685-137172706:+] 0.5004 145 7 -16.42 -0.2593 MIMAT0000537 mmu-miR-27a 170707 Usp48 cgccUUGAAUC--GGUGAC-ACUu |||| || :||||| ||| caccAACUCAGGAUCACUGUUGAc 2 18 796 819 [mm9:4:137212855-137212878:+] 0.5172 124 0 -12.80 -0.1056 MIMAT0000541 mmu-miR-96 170707 Usp48 ucguuuuuacacgaucACGGUUu |||||| ucacuguuaaccuuucUGCCAAa 2 8 2334 2356 [mm9:4:137214393-137214415:+] 0.5896 120 6 -10.51 -0.1079 MIMAT0000559 mmu-miR-326 170707 Usp48 ugaccUCCUUC-CCGGGUCUCc || ||| ||||||| uccuuAGAAAGAAACCCAGAGu 2 17 1347 1368 [mm9:4:137213406-137213427:+] 0.5101 147 7 -15.06 -0.5021 MIMAT0004642 mmu-miR-330 170707 Usp48 cgGAUUCUGUGUCCGGGUCUCu || ||| | | ||||||| ucCUUAGAAAGAAACCCAGAGu 2 21 1347 1368 [mm9:4:137213406-137213427:+] 0.5101 160 7 -23.02 -0.5021 MIMAT0000580 mmu-miR-148b 170707 Usp48 uguuucaagacaCU-ACGUGACu || ||||||| ucaaauaaagcaGAUUGCACUGa 2 11 160 182 [mm9:4:137212219-137212241:+] 0.7691 141 7 -16.01 -0.8835 MIMAT0000648 mmu-miR-10a 170707 Usp48 guguuuAAGCCU-AGAUGUCCCAu || || | |||||||| aaacccUUAAGACUAUACAGGGUg 2 18 764 787 [mm9:4:137212823-137212846:+] 0.5253 152 7 -15.75 -0.2497 MIMAT0000663 mmu-miR-218 170707 Usp48 ugUACCAAUCUAGUUCGU-GUu | || ||| |:||||| || ugACGG-UAGUUUAAGCAGCAu 2 20 816 836 [mm9:4:137212875-137212895:+] 0.5172 125 0 -12.48 -0.1945 MIMAT0000677 mmu-miR-7a 170707 Usp48 ugUUGUUUU---AGU-GAUC-AGAAGGu ||::||| |:| ||:| |||||| agAAUGAAACUCUUACCUGGCUCUUCCa 2 22 87 114 [mm9:4:137212146-137212173:+] 0.7691 127 6 -15.96 -1.0692 MIMAT0000704 mmu-miR-361 170707 Usp48 caugGGGACCUC---UAAGAC-UAUu | || ||| |||||| ||| ugcaCACUAGAGAAAAUUCUGCAUAc 2 19 2126 2151 [mm9:4:137214185-137214210:+] 0.5009 121 0 -11.19 -0.1845 MIMAT0000711 mmu-miR-365 170707 Usp48 uauuccUAAAAAUCCCCGUAAu || ||| ||||||| auugacAUGUUU--GGGCAUUa 2 17 50 69 [mm9:4:137212109-137212128:+] 0.7691 149 7 -12.11 -1.2348 MIMAT0000748 mmu-miR-383 170707 Usp48 ucggugucAGUGGAAGACUAGa |:| ||||||||| ggauaaccUUAACUUCUGAUCu 2 15 2011 2032 [mm9:4:137214070-137214091:+] 0.5014 158 7 -17.37 -0.3728 MIMAT0004745 mmu-miR-384-5p 170707 Usp48 uguaacggaUC-CUUA--ACAAAUGu || |||| ||||||| aagaguaggAGUGAAUCAUGUUUACa 2 15 267 292 [mm9:4:137212326-137212351:+] 0.7691 148 7 -16.70 -0.7748 MIMAT0003182 mmu-miR-494 170707 Usp48 cuCCAAAGGGCACAUACAAAGu || ||| | |||||||| caGGCUUC---UUUAUGUUUCc 2 21 1930 1948 [mm9:4:137213989-137214007:+] 0.5028 152 7 -13.28 -0.4382 MIMAT0003374 mmu-miR-302b 170707 Usp48 gauGAUUUUGUACCUUC-GUGAAu ||: | || ||| ||||| uuuCUGCCAAAUUAAAGACACUUg 2 21 2346 2369 [mm9:4:137214405-137214428:+] 0.5896 120 0 -11.30 -0.5750 MIMAT0004186 mmu-miR-301b 170707 Usp48 cgaaacUGUUAUG-GUAACGUGAc |:|| :| |||||||| ugucaaAUAAAGCAGAUUGCACUg 2 18 158 181 [mm9:4:137212217-137212240:+] 0.7691 152 7 -15.86 -0.4177 MIMAT0003450 mmu-miR-488 170707 Usp48 cuGGUUCUUUGUCGGAAAGUu || | | || :|||||| aaCCUAUACUCA-UCUUUCAa 2 20 432 451 [mm9:4:137212491-137212510:+] 0.7457 133 6 -12.89 -0.1172 MIMAT0004828 mmu-miR-708 170707 Usp48 gggUCGAUCUA-ACAU-UC-GAGGAa ||| | || |||| || ||||| ccaAGC-AAAUGUGUAGAGUCUCCUa 2 21 2203 2227 [mm9:4:137214262-137214286:+] 0.5321 124 0 -15.74 -0.4885 MIMAT0003515 mmu-miR-721 170707 Usp48 aagggggaaaaUUAACGUGAc :|||||||| caaauaaagcaGAUUGCACUg 2 11 161 181 [mm9:4:137212220-137212240:+] 0.7691 146 7 -14.52 -0.4273 MIMAT0004324 mmu-miR-181d 170707 Usp48 uggguggCUGUUGUUACU-UACAa |||:| | ||| |||| aaaggaaGACGAAAUUGACAUGUu 2 17 37 60 [mm9:4:137212096-137212119:+] 0.7691 124 0 -11.63 -0.6141 MIMAT0004854 mmu-miR-876-5p 170707 Usp48 aucacuaagugucucUUUAGGu |||||| ucuuccaaaagacaaAAAUCCa 2 8 108 129 [mm9:4:137212167-137212188:+] 0.7691 120 6 -8.76 -0.1438 MIMAT0004854 mmu-miR-876-5p 170707 Usp48 aucacuaAGUGUCU--CUUUAGGu |:| ||| ||||||| gaggcugUUAGAGAAUGAAAUCCu 2 16 192 215 [mm9:4:137172622-137172645:+] 0.5348 150 7 -14.04 -0.9577 MIMAT0004869 mmu-miR-421 170707 Usp48 cgcgGGUUAA---UUACAGACAACUa |||| | :|| ||||||| cucaCCAACUCAGGAUCACUGUUGAc 2 20 794 819 [mm9:4:137212853-137212878:+] 0.5172 150 7 -14.48 -0.1021 MIMAT0004869 mmu-miR-421 170707 Usp48 cgcggguuaauuacaGACAACua |||||| uguuuuuaucuuuacCUGUUGca 3 9 54 76 [mm9:4:137172484-137172506:+] 0.5035 120 0 -7.93 -0.1492 MIMAT0004936 mmu-miR-873 170707 Usp48 uccucUGAGUGUUCAAGGACg :|| || ||||||| uaccaGCUGCCAUGUUCCUGc 2 17 1787 1807 [mm9:4:137213846-137213866:+] 0.5013 152 7 -16.66 -0.2074

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G040308 Usp48 Mus musculus 170707 19536157 0 0 R51158; MOUSE$USP48_01; Binding factors: mmu-miR-9-5p // 0 0 R51159; MOUSE$USP48_02; Binding factors: mmu-miR-30a-5p , mmu-miR-30b-5p , mmu-miR-30c-5p , mmu-miR-30d-5p , mmu-miR-30e-5p , mmu-miR-384-5p // 0 0 R51160; MOUSE$USP48_03; Binding factors: mmu-miR-124-3p // 0 0 R51161; MOUSE$USP48_04; Binding factors: mmu-miR-130a-3p , mmu-miR-130b-3p , mmu-miR-19a-3p , mmu-miR-19b-3p , mmu-miR-301a-3p , mmu-miR-301b-3p , mmu-miR-721

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Usp48 mmu-miR-692 beg:633 end:651 pic:3' CTCACTCCGCGAGTTTCTCTA 5'& | ||| |||||||| &5' ----GTGGCAG-CAAAGAGA- 3' Usp48 mghv-miR-M1-9 beg:2200 end:2216 pic:3' TTTTTCCAGGTCCGTTTACACT 5'& ||| ||||||||| &5' --------CCAAGCAAATGTG- 3' Usp48 mmu-miR-879 beg:1255 end:1271 pic:3' CCGAATCTCGATATTCGGAGA 5'& |.| ||||||| &5' ------GGGACC-AAGCCTC- 3' Usp48 mmu-miR-10a beg:771 end:788 pic:3' GTGTTTAAGCCTAG-ATGTCCCAT 5'& || ||||||||. &5' ----------GACTATACAGGGTG 3' Usp48 mmu-miR-10b beg:776 end:788 pic:3' GTGTTTAAGCCAAGATGTCCCAT 5'& ||||||||. &5' --------------TACAGGGTG 3' Usp48 mmu-miR-1959 beg:2146 end:2166 pic:3' GAGGTGACTCGATGTAGGGG 5'& .||||| | |||||||| &5' ---TACTGACCCACATCCCC 3' Usp48 mmu-miR-27a beg:1484 end:1504 pic:3' CGCCTTGAATCGGTGACACTT 5'& ||| |||| ||||||||. &5' ---GAAGTTAG-CACTGTGAG 3' Usp48 mmu-miR-28 beg:1171 end:1188 pic:3' GAGTTATCTGACACTCGAGGAA 5'& ||||| |||||||| &5' CTCAAG-------GAGCTCCT- 3' Usp48 mmu-miR-708 beg:1177 end:1188 pic:3' GGGTCGATCTAACATTCGAGGAA 5'& .||||||| &5' --------------GAGCTCCT- 3' Usp48 mmu-miR-127star beg:1654 end:1674 pic:3' TAGTCTCGGGA-GA-CTCGAAGTC 5'& ||||.| || ||||||||| &5' -----AGCCTTACTGGAGCTTCAG 3' Usp48 mmu-miR-483star beg:14 end:33 pic:3' TTCTGCCCTCCCCTCCTCACT 5'& ||| |||||||| &5' --GACTGCCA---AGGAGTGA 3' Usp48 mmu-miR-18astar beg:503 end:519 pic:3' GTCTTCCTCGTGAA-TCCCGTCA 5'& || || ||||||| &5' --------GC-CTGCAGGGCAG- 3' Usp48 mcmv-miR-m107-1-5p beg:380 end:396 pic:3' CCACTGAGCTCTGCTCACTGGC 5'& |||| | |||||||| &5' ----ACTC----CAAGTGACCG 3' Usp48 mmu-miR-154 beg:2001 end:2020 pic:3' GCTTCCGTTGTGCCTATTGGAT 5'& |.||| ||||||||| &5' -----GTAACCAGGATAACCT- 3' Usp48 mmu-miR-494 beg:1929 end:1948 pic:3' CTCCAAAGGGCACATACAAAGT 5'& ||| |||.. |||||||| &5' -AGGCTTCTT---TATGTTTC- 3' Usp48 mmu-miR-2141 beg:524 end:538 pic:3' TTGAAAAGACTGTGGAGGA 5'& ||| ||||||| &5' -------CTGCCACCTCC- 3' Usp48 mmu-miR-128 beg:1483 end:1503 pic:3' TTTCTCTGGCCAAGTGACACT 5'& ||| |||||||| &5' ----AGAAGTTAGCACTGTGA 3' Usp48 mmu-miR-654-3p beg:1750 end:1763 pic:3' TTCCACTACCAGTCGTCTGTAT 5'& |||||||||| &5' ------------AGCAGACATA 3' Usp48 mmu-miR-1968 beg:1782 end:1797 pic:3' TCAGGTGGTAGGAATTGTCGACGT 5'& |||| ||||||| &5' -----------CTTACCAGCTGC- 3' Usp48 mmu-miR-687 beg:2000 end:2016 pic:3' AGTAACGACGTAAGGTCCTATC 5'& ||.| |||||||| &5' -------TGTAA-CCAGGATA- 3' Usp48 mmu-miR-218-1star beg:1789 end:1803 pic:3' CCACGAACTGCCTTGGTACAAA 5'& ||| .||||||| &5' ---GCT-------GCCATGTT- 3' Usp48 mmu-miR-299 beg:2146 end:2162 pic:3' TTCGCCAAATGGCAGGGTGTAT 5'& |||.| ||||||| &5' --------TACTGACCCACAT- 3' Usp48 mmu-miR-326 beg:1349 end:1368 pic:3' TGACCTCCTTCCC-GGGTCTCC 5'& || ||| ||||||| &5' -----AGAAAGAAACCCAGAG- 3' Usp48 mmu-miR-1982star beg:2035 end:2052 pic:3' GGAGGGGTCCTGGGAGGGTT 5'& ||.||. |||||||. &5' -CTTCCT-----CCTCCCAG 3' Usp48 mmu-miR-1943 beg:521 end:540 pic:3' AGGTCCACGGGTCTA-GGAGGGAA 5'& |||| ||||||| &5' -------GCCCTGCCACCTCCCT- 3' Usp48 mmu-miR-709 beg:783 end:797 pic:3' AGGAGGACGGAGACGGAGG 5'& ||. ||||||| &5' ------TGTG-CTGCCTC- 3' Usp48 mmu-miR-1953 beg:1944 end:1962 pic:3' GTCTTCGGACTCTTGAAAGGGT 5'& ||| |||||||| &5' ------CCTTTTT-CTTTCCCA 3' Usp48 mmu-miR-130bstar beg:1083 end:1103 pic:3' TCATCACGTTGTCCCTTTCTCA 5'& |||||.. |||||||| &5' -----TGCAATGAAGAAAGAGT 3' Usp48 mmu-miR-671-3p beg:668 end:683 pic:3' CCACCTCGGGACTCTTGGCCT 5'& |||| |||||||| &5' -----AGCC----GAACCGGA 3' Usp48 mmu-miR-337-3p beg:1600 end:1614 pic:3' TCCGTAGTATATC-CTCGACTT 5'& || |||||||| &5' -----------AGCGAGCTGAA 3' Usp48 mmu-miR-715 beg:864 end:879 pic:3' GTGCGCCCCCACACGTGCCTC 5'& |||| ||||||| &5' -----GGGGA---GCACGGA- 3' Usp48 mmu-miR-1971 beg:411 end:430 pic:3' AGAGTCGGGTCGGAAATG 5'& || |||||||||||. &5' -CTAA-CCCAGCCTTTAT 3' Usp48 mmu-miR-1981 beg:411 end:430 pic:3' CGGTGCAGATTCGGGTCGGAAATG 5'& |||| |||||||||||. &5' -------CTAA-CCCAGCCTTTAT 3' Usp48 mmu-miR-133a beg:1250 end:1267 pic:3' GTCGACCAACTTC-CCCTGGTTT 5'& ||| ||||||||. &5' ---------GAAATGGGACCAAG 3' Usp48 mmu-miR-133b beg:1250 end:1267 pic:3' ATCGACCAACTTC-CCCTGGTTT 5'& ||| ||||||||. &5' ---------GAAATGGGACCAAG 3' Usp48 mmu-miR-483star beg:255 end:281 pic:3' TTCTGCCCTCC--C-C-TCCTCACT 5'& ||.| ||| | | |||||||| &5' -AGGCA-GAGCAAGAGTAGGAGTGA 3' Usp48 mmu-miR-346 beg:1579 end:1595 pic:3' TCTCCGTCCGTGAGCCCGTCTGT 5'& || | |||||||| &5' ---------CAGTGGGGCAGAC- 3' Usp48 mmu-miR-365 beg:59 end:70 pic:3' TATTCCTAAAAATCCCCGTAAT 5'& |||||||| &5' --------------GGGCATTA 3' Usp48 mmu-miR-532-3p beg:224 end:235 pic:3' ACGTTCGGAACCCACACCCTCC 5'& |||||||| &5' --------------GTGGGAGG 3' Usp48 mmu-miR-873 beg:1789 end:1808 pic:3' TCCTCTGAGTGTTCAAGGACG 5'& .|| || |||||||| &5' -----GCTGCCATGTTCCTGC 3' Usp48 mcmv-miR-m01-3star beg:1430 end:1453 pic:3' CGGCACTTCGCTCG-CAAGGAGC 5'& || ||||| ||| ||||||| &5' GCAA-GAAGC-AGCTGTTCCTC- 3' Usp48 mcmv-miR-m107-1-5p beg:565 end:586 pic:3' CCACTGAGCTCTGCTCACTGGC 5'& |. || || | ||||||.| &5' ---GGGTCAAG-CCAGTGACTG 3' Usp48 mcmv-miR-m107-1-5p beg:13 end:35 pic:3' CCACTGAGCTCTGCTCACTGGC 5'& ||||| | |||||||| &5' --TGACTGCCAAGGAGTGACC- 3' Usp48 mcmv-miR-m108-2-5p.1 beg:566 end:587 pic:3' GCCACGAGCGCAGCTCACTGGCG 5'& ||| | || ||||||.|. &5' -GGT-CAAGCC---AGTGACTGT 3' Usp48 mcmv-miR-m22-1 beg:1185 end:1199 pic:3' ACCGGAGCCATGCCTGCCCCTT 5'& ||||. .||||| &5' --GCCTT--------TGGGGA- 3' Usp48 mcmv-miR-M23-2 beg:2149 end:2167 pic:3' GGCGAACTGGCTCCGGGGGTA 5'& ||||| .||||| &5' -----TGACCCACATCCCCA- 3' Usp48 mcmv-miR-m59-1 beg:398 end:418 pic:3' GACTGCCAGCTCCGT----GACGATT 5'& ||| || ||||||| &5' ---------GAGACAAGATCTGCTAA 3' Usp48 mcmv-miR-m59-1 beg:2324 end:2344 pic:3' GACTGCCAGCTCC--GTGACGATT 5'& |.||| |||||.||| &5' -------TTGAGAATCACTGTTAA 3' Usp48 mcmv-miR-m88-1 beg:1155 end:1176 pic:3' TCTGGGGCTGTA-GCTGAAGAC 5'& ||. || .||||||| &5' ---CCTGGAAGACTGACTTCT- 3' Usp48 mghv-miR-M1-7-5p beg:1139 end:1158 pic:3' TCCAATGGCGTGGAGGTGGAAA 5'& .|.|||| |.||||| &5' -----GCTGCACACCTACCTT- 3' Usp48 mmu-let-7a beg:771 end:798 pic:3' TTGATATGTT--GGATGATGGAGT 5'& .||||||||. . |.||.||||| &5' GACTATACAGGGTGTGCTGCCTCA 3' Usp48 mmu-let-7c beg:777 end:798 pic:3' TTGGTATGTT--GGATGATGGAGT 5'& |||||. . |.||.||||| &5' ----ATACAGGGTGTGCTGCCTCA 3' Usp48 mmu-let-7e beg:1175 end:1193 pic:3' TTGATATGTTGGAGGATGGAGT 5'& | .| |||||.|||. &5' ------AGGAGCTCCTGCCTT- 3' Usp48 mmu-let-7e beg:2028 end:2042 pic:3' TTGATATGTTGGAGGATGGAGT 5'& |.||||||.|| &5' ----------CTTCCTACTTC- 3' Usp48 mmu-let-7f beg:775 end:798 pic:3' TTGATATGT--TAGATGATGGAGT 5'& ||||||| .| |.||.||||| &5' --CTATACAGGGTGTGCTGCCTCA 3' Usp48 mmu-let-7g beg:776 end:798 pic:3' TTGACATGTTTG--ATGATGGAGT 5'& ||||.. |.||.||||| &5' -----TACAGGGTGTGCTGCCTCA 3' Usp48 mmu-let-7g beg:136 end:158 pic:3' TTGACATGTTTGATGATGGAGT 5'& .||||| | ||| |.|||.| &5' GACTGT-CCCACT--TGCCTTA 3' Usp48 mmu-miR-101astar beg:567 end:586 pic:3' CGTAG-TCGTGACACTATTGACT 5'& | .|| ||| | .|.|||| &5' GGGTCAAGC-CA---GTGACTG- 3' Usp48 mmu-miR-101b beg:2081 end:2101 pic:3' AAGTCGATAGTGTCATGACAT 5'& ||| | || | ||.||||. &5' --CAGGTTTC-CTGTGCTGTG 3' Usp48 mmu-miR-103 beg:1803 end:1826 pic:3' AGTATCGGGACAT--GTTACGACGA 5'& ||.| | ||||||.| &5' -----GCTCACTAATCCATGCTGTT 3' Usp48 mmu-miR-105 beg:1762 end:1784 pic:3' TGGTGTTCGTAGACTCGTGAACC 5'& .|| ||| .||| |||.|||| &5' -TCA-AAGAGTCT--GCATTTGG 3' Usp48 mmu-miR-107 beg:1803 end:1826 pic:3' ACTATCGGGACAT--GTTACGACGA 5'& ||.| | ||||||.| &5' -----GCTCACTAATCCATGCTGTT 3' Usp48 mmu-miR-107 beg:1035 end:1056 pic:3' ACTATCGGGACATGTTACGACGA 5'& ||.||||..| |.| ||||| &5' TGGTAGCTTTCTGC--TGCTG-- 3' Usp48 mmu-miR-107 beg:1601 end:1624 pic:3' ACTATCGG--GACATGTTACGACGA 5'& ||| ||| .||||||| &5' ----AGCGAGCTGAAGTGTGCTGCT 3' Usp48 mmu-miR-107 beg:773 end:794 pic:3' ACTATCGGGACATGT----TACGACGA 5'& || |||| .|||||| &5' --------CTATACAGGGTGTGCTGC- 3' Usp48 mmu-miR-10a beg:1949 end:1970 pic:3' GTGTTTAAGCCTAGA---TGTCCCAT 5'& ||| || .|||||| &5' ------TTCTT-TCCCAGGCAGGGT- 3' Usp48 mmu-miR-10b beg:1949 end:1970 pic:3' GTGTTTAAGCCAAGA---TGTCCCAT 5'& ||| ||| .|||||| &5' ------TTCT-TTCCCAGGCAGGGT- 3' Usp48 mmu-miR-1 beg:1002 end:1026 pic:3' TATGTATGA--AGAAATGTAAGGT 5'& ||||||.|| ||| ||||| &5' ATACATGCTGATCTCAACATT--- 3' Usp48 mmu-miR-1186 beg:1480 end:1499 pic:3' GTACGGAAATTAAGGTCGTGAG 5'& ||| ..|||||| &5' ---GCCAGAAG--TTAGCACT- 3' Usp48 mmu-miR-1191 beg:1418 end:1439 pic:3' ATCCCGATGTATCATTCTGAC 5'& |.|||||| .|.| |||| &5' TGGGGCTAGGTGGCAAGA--- 3' Usp48 mmu-miR-1195 beg:1978 end:2000 pic:3' ACTCGTCCGACCGGAGCTTGAGT 5'& |||||||||||.|.||||| &5' ----CAGGCTGGCCTTGGACTCA 3' Usp48 mmu-miR-1196 beg:255 end:276 pic:3' TCCGTCTCCGTC-CATCTAAA 5'& |||||||| || ||||. &5' AGGCAGAGCAAGAGTAGG--- 3' Usp48 mmu-miR-1197 beg:1089 end:1109 pic:3' TCTTCA-TCTGGTACACAGGAT 5'& |||| ||| ||||.||. &5' -GAAGAAAGA----GTGTTCTG 3' Usp48 mmu-miR-124 beg:141 end:158 pic:3' CCGTAAGTGGCGCACGGAAT 5'& || || | ||||||| &5' -----TC-CCACTTGCCTTA 3' Usp48 mmu-miR-125a-3p beg:1269 end:1288 pic:3' CCGAG-GGTTCTTGGAGTGGACA 5'& ||| ||||||.|| |||. &5' --CTCACCAAGAGCC-CACT--- 3' Usp48 mmu-miR-125a-3p beg:77 end:106 pic:3' CCGAGGGTTCTTG------GAGTGGACA 5'& ||.| ..|||||. ||.||||| &5' GGTT-TTAAGAATGAAACTCTTACCTG- 3' Usp48 mmu-miR-1-2-as beg:913 end:931 pic:3' ACCTTACATTTCTTCATACAT 5'& |||| ||| .|||||| &5' TGGATTGTT----GGTATGT- 3' Usp48 mmu-miR-1306 beg:1266 end:1288 pic:3' GTAGTG-GTGG-TCTCGGTTGCA 5'& |||| |||| |||||| || &5' --TCACTCACCAAGAGCCCAC-- 3' Usp48 mmu-miR-130a beg:165 end:182 pic:3' TACGGGAAAATTGT--AACGTGAC 5'& |.|| |||||||| &5' ----------AGCAGATTGCACTG 3' Usp48 mmu-miR-130b beg:167 end:182 pic:3' TACGGGAAAGTAGTAACGTGAC 5'& || ||||||||| &5' ---------CAG-ATTGCACTG 3' Usp48 mmu-miR-130bstar beg:222 end:242 pic:3' TCATCACGTTGTCCCTTTCTCA 5'& || | . |||||.||.| &5' ---AG-GTGGGAGGGAGAGGG- 3' Usp48 mmu-miR-130bstar beg:282 end:303 pic:3' TCATCACGT-TGTCCCTTTCTCA 5'& ||. ||| ||..|||| &5' -----TGTTTACACTGAGGGAGT 3' Usp48 mmu-miR-133a beg:16 end:38 pic:3' GTCGACCAACTTCC-C-CTGGTTT 5'& ||| |||| | |||||.| &5' ---CTGCC--AAGGAGTGACCAGA 3' Usp48 mmu-miR-133astar beg:1775 end:1794 pic:3' TAAACCAAGGTAAAATGGTCG 5'& |||||| | |||||||| &5' ATTTGGA--C---TTACCAGC 3' Usp48 mmu-miR-133b beg:16 end:38 pic:3' ATCGACCAACTTCC-C-CTGGTTT 5'& ||| |||| | |||||.| &5' ---CTGCC--AAGGAGTGACCAGA 3' Usp48 mmu-miR-137 beg:1531 end:1558 pic:3' GATGCGC-ATAAGAA-TTCGTTATT 5'& |||| |.|| |.|.||||. &5' -TACGAAATGTTAGCAAGGTAATAG 3' Usp48 mmu-miR-140 beg:2319 end:2340 pic:3' GATGGTATCCCATTTTGGTGAC 5'& ||..|| |.||.||||| &5' -TATTATTG---AGAATCACTG 3' Usp48 mmu-miR-145 beg:1829 end:1846 pic:3' TCCCTAAGGACCCTTTTGACCTG 5'& |||| .|.||||. &5' ------TCCTCT--GAGCTGGG- 3' Usp48 mmu-miR-146a beg:572 end:597 pic:3' TTGGGTACCT-TA-AGTCAAGAGT 5'& |.|| .|| .| ||||||.|| &5' AGCCAGTGACTGTCTCAGTTTTC- 3' Usp48 mmu-miR-146b beg:572 end:597 pic:3' TCGGATACCT-TA-AGTCAAGAGT 5'& |||| .|| .| ||||||.|| &5' AGCCAGTGACTGTCTCAGTTTTC- 3' Usp48 mmu-miR-147 beg:1132 end:1151 pic:3' ATC-GTCTTCGTAAAGGCGTGTG 5'& | |||.|| |.|||||| &5' --GCCAGGAGAG---CTGCACAC 3' Usp48 mmu-miR-148a beg:161 end:183 pic:3' TGTTTCAAGACATCACGTGACT 5'& |.|||| |||||||| &5' ATAAAGCAGAT---TGCACTGA 3' Usp48 mmu-miR-148b beg:169 end:183 pic:3' TGTTTCAAGACACT-ACGTGACT 5'& || |||||||| &5' ------------GATTGCACTGA 3' Usp48 mmu-miR-149 beg:1474 end:1489 pic:3' CCCTCACTTCTGTGCCTCGGTCT 5'& .||| ||||||| &5' ----------GCACA-AGCCAGA 3' Usp48 mmu-miR-150star beg:138 end:163 pic:3' GATAGGG-GGTCCGGAC-ATGGTC 5'& ||.|||| |. |||| | || &5' CTGTCCCACTT-GCCTTATGTCA- 3' Usp48 mmu-miR-152 beg:172 end:183 pic:3' GGTTCAAGACAGTACGTGACT 5'& |||||||| &5' -------------TGCACTGA 3' Usp48 mmu-miR-155 beg:52 end:71 pic:3' TGGGGATAGTGTTAA-TCGTAATT 5'& ||.. .||||||| &5' --------CATGTTTGGGCATTAA 3' Usp48 mmu-miR-155 beg:1373 end:1393 pic:3' TGGGGATAGTGTTAATCGTAATT 5'& |..|.| |||| ||||||. &5' --CTTTGTAACAA--AGCATTG- 3' Usp48 mmu-miR-15b beg:1037 end:1056 pic:3' ACATTTGGTACTACACGACGAT 5'& || |.|. |||||||. &5' -GT-AGCTTTC---TGCTGCTG 3' Usp48 mmu-miR-15b beg:1603 end:1624 pic:3' ACATTTGGTACTACACGACGAT 5'& | |.|.. .||||||||| &5' -GCGAGCTGAAGTGTGCTGCT- 3' Usp48 mmu-miR-16 beg:1034 end:1056 pic:3' GCGGTTATAAATGCACGACGAT 5'& . .|| |||||||. &5' --TTGGTAGCTTTCTGCTGCTG 3' Usp48 mmu-miR-16 beg:1605 end:1624 pic:3' GCGGTTATAAATGCACGACGAT 5'& || | .|||||||| &5' -GCTGAAG----TGTGCTGCT- 3' Usp48 mmu-miR-17star beg:1635 end:1655 pic:3' GATGTTCACGGGA-GTGACGTCA 5'& .|||||| |||||||| &5' -----GGTGCCCGCCACTGCAG- 3' Usp48 mmu-miR-182 beg:2336 end:2357 pic:3' GCCACACTCAAGATGGTA--ACGGTTT 5'& ||| ||| ||||||| &5' --------GTTA-ACCTTTCTGCCAAA 3' Usp48 mmu-miR-182 beg:461 end:480 pic:3' GCCACAC-TCAAGATGGTAACGGTTT 5'& ||| || ||. |||||| &5' ----GTGAAGG---ACT--TGCCAA- 3' Usp48 mmu-miR-183 beg:2085 end:2099 pic:3' TCACTTAAGATGGTCACGGTAT 5'& |.| || ||||..| &5' -------TTT-CCTGTGCTGT- 3' Usp48 mmu-miR-187 beg:2239 end:2260 pic:3' GGCCGACGTTG-TGTTCTGTGCT 5'& .||| || || |||||.| &5' ----TTGCCACTACCAGACATG- 3' Usp48 mmu-miR-188-5p beg:596 end:617 pic:3' GGGAGGTGGTACG--TTCCCTAC 5'& |||||.||| .|||||| &5' --CTCCATCATCTCAGAGGGAT- 3' Usp48 mmu-miR-1894-3p beg:1444 end:1466 pic:3' GAGGGAAGTGGGAGAGGGAACG 5'& |.||| | ||||.||.|||| &5' -TTCCTCC-CCCTTTCTCTTG- 3' Usp48 mmu-miR-1897-5p beg:123 end:136 pic:3' GGGGGAGAAAGAGGTAGGTTTC 5'& |||||.|||| &5' -----------TCCATTCAAA- 3' Usp48 mmu-miR-18a beg:881 end:905 pic:3' GATAGACGTGATCT----ACGTGGAAT 5'& ||| .| || ||||..|| &5' ----CTGGGC-AGCGATTTGCATTTT- 3' Usp48 mmu-miR-18a beg:1015 end:1037 pic:3' GATAGACGTGATCTACGTGGAAT 5'& || ||.|.| |||.||| &5' ---TCAACATTGGCAGCATCTT- 3' Usp48 mmu-miR-18astar beg:1113 end:1132 pic:3' GTCTTCCTCGTGAATCCCGTCA 5'& .|| |||.| .|||||| &5' ---GAGAAGCGC--GGGGCAG- 3' Usp48 mmu-miR-18astar beg:1577 end:1593 pic:3' GTCTTCCTCGTGA-ATCCCGTCA 5'& .|| |.|||||| &5' ---------TACAGTGGGGCAG- 3' Usp48 mmu-miR-18b beg:1016 end:1037 pic:3' GATTGTCGTGATCTACGTGGAAT 5'& || ||.|.| |||.||| &5' ----CAACATTGGCAGCATCTT- 3' Usp48 mmu-miR-1901 beg:226 end:248 pic:3' CCTGGGGGCCCTCA--TGCTCGCC 5'& ||. ||||| .|||||| &5' GGGA----GGGAGAGGGCGAGCG- 3' Usp48 mmu-miR-1904 beg:1122 end:1135 pic:3' GGAGGGAGGTCTCCTCGTCTTG 5'& ||.|||||.| &5' ------------GGGGCAGAGC 3' Usp48 mmu-miR-1907 beg:1032 end:1056 pic:3' TGGAGGTCTA-G-GAGACGACGAG 5'& |.|. | | .||||||||| &5' -CTTTTGGTAGCTTTCTGCTGCT- 3' Usp48 mmu-miR-1928 beg:2060 end:2076 pic:3' CTCGACCGTTACATCGA 5'& || ||| ||||.|| &5' --GCAGGC-ATGTGGC- 3' Usp48 mmu-miR-1934 beg:18 end:38 pic:3' TCTCCTGCTTCG--TCC-C-CTGGTCT 5'& || ||| | ||||||| &5' ----------GCCAAGGAGTGACCAGA 3' Usp48 mmu-miR-1934 beg:244 end:271 pic:3' TCTCCTGCTTCGTCCC-CTGG-TCT 5'& |||||| .|||||| || | ||| &5' -GAGGACTGAGCAGGCAGAGCAAGA 3' Usp48 mmu-miR-1937a beg:2048 end:2063 pic:3' ACCCCCGAGCAGGCCCTAA 5'& ||. |.|||||| &5' ----GGTG---CTGGGATT 3' Usp48 mmu-miR-193b beg:298 end:318 pic:3' TCGCCCTGAAACACCCGGTCAA 5'& ||.| .| ||.|||| &5' AGTGAAGCCCT---GGTCAGT- 3' Usp48 mmu-miR-193star beg:1586 end:1597 pic:3' AGTAGAACGGGCGTTTCTGGGT 5'& || ||||||| &5' -----------GC--AGACCCA 3' Usp48 mmu-miR-1940 beg:1220 end:1241 pic:3' TTGACGAGGTGGAAGAGTCAGGAGGTA 5'& |||.. | || |||||..| &5' ----GCTTT-CAGA-TCTGTCCTTTA- 3' Usp48 mmu-miR-1942 beg:1291 end:1313 pic:3' GTTGG-TCTACTTCTGTAGACT 5'& || ||. |||||||.||| &5' ---CCAAGGCCAAGACATTTGA 3' Usp48 mmu-miR-1944 beg:1844 end:1866 pic:3' TTAGTCTTGAACTGTAA---GTCGTGTCTC 5'& ||.| ||||||||. &5' ----------TGGCTGTATACAGCACAGG- 3' Usp48 mmu-miR-195 beg:1605 end:1624 pic:3' CGGTTATAAAGACACGACGAT 5'& || | ||||||||| &5' GCTGAAG----TGTGCTGCT- 3' Usp48 mmu-miR-1952 beg:227 end:246 pic:3' GTCTTCCTC-CCACCTCT 5'& .||.|||| || ||| &5' -GGAGGGAGAGGGCGAG- 3' Usp48 mmu-miR-1953 beg:2283 end:2308 pic:3' GTCTTCGGACTCTT-------GAAAGGGT 5'& |||||||. ||||.|. &5' ------CCTGAGAGAAAACTTCTTTTCT- 3' Usp48 mmu-miR-1953 beg:1274 end:1297 pic:3' GTCTTCGGACTCTTGAAAGGGT 5'& || |||| |||||||| &5' CAAGAGCCCACT--CTTTCCCA 3' Usp48 mmu-miR-1954 beg:1959 end:1978 pic:3' TTGTCCCAGAGTGAGACGTCA 5'& ..||||||.|| |||.| &5' GGCAGGGTTTC---CTGTA-- 3' Usp48 mmu-miR-1954 beg:2079 end:2101 pic:3' TTGTCCCAGAGTGAGACGTCA 5'& .||| |||.|| || ||| || &5' GACA-GGTTTC-CTGTGCTGT 3' Usp48 mmu-miR-1956 beg:1712 end:1733 pic:3' AGGCGACTGAGTC---GGGACCTGA 5'& .|| | ||||||.|| &5' -------GCTTGGGATCCCTGGGCT 3' Usp48 mmu-miR-1958 beg:1930 end:1957 pic:3' TGAATG---ACGAAGGTGAAAGGAT 5'& .||| ||.|||| .||||.| &5' GCTTCTTTATGTTTCCTTTTTCTT- 3' Usp48 mmu-miR-1960 beg:1479 end:1500 pic:3' TCGGGAGAAGATTGTCGTGACC 5'& |||| .||||||| &5' AGCCAGAAGT---TAGCACTG- 3' Usp48 mmu-miR-1960 beg:1373 end:1394 pic:3' TCGGGAGAAGATTG--TCGTGACC 5'& ||. || |||| ||||.||| &5' -GCT---TTGTAACAAAGCATTGG 3' Usp48 mmu-miR-1961 beg:785 end:798 pic:3' AAGATTGATGATGGAGT 5'& |.||.||||| &5' -------TGCTGCCTCA 3' Usp48 mmu-miR-1962 beg:411 end:428 pic:3' TACACAGGGTCACGGTCGGAGA 5'& |.| |||||||.| &5' -------CTAAC-CCAGCCTTT 3' Usp48 mmu-miR-1968 beg:1130 end:1148 pic:3' TCAGGTGGTAGGAATTGTCGACGT 5'& .||| .| ||||||| &5' -----GCCAG----GAGAGCTGCA 3' Usp48 mmu-miR-1968 beg:1436 end:1448 pic:3' TCAGGTGGTAGGAATTGTCGACGT 5'& |.||||||. &5' --------------AGCAGCTGT- 3' Usp48 mmu-miR-1969 beg:201 end:224 pic:3' TGGGTACAATTTC--AGAGGTAGAA 5'& |.|||| || |.||.||.| &5' ---CGTGTTTCAGATTTTCTATTT- 3' Usp48 mmu-miR-196b beg:734 end:759 pic:3' GGGTTGTTGTCCTT---TGATGGAT 5'& ||. | ||| |||.|.| &5' CCTTCCTC--GGACCTCACTGCTT- 3' Usp48 mmu-miR-1971 beg:1170 end:1194 pic:3' AGAG----TCG-GGTCGGAAATG 5'& |||| ||| || ||||||. &5' TCTCAAGGAGCTCCTGCCTTTG- 3' Usp48 mmu-miR-1981 beg:1172 end:1194 pic:3' CGGTGCAGATTCG-GGTCGGAAATG 5'& .|| .||| || ||||||. &5' -TCAAG---GAGCTCCTGCCTTTG- 3' Usp48 mmu-miR-1982.2 beg:1827 end:1849 pic:3' GACACCCT-CTTGTATCCCACT 5'& ||| ||.| |.|||||. &5' -TGTCCTCTGAGC-TGGGGTGG 3' Usp48 mmu-miR-1982star beg:1053 end:1071 pic:3' GGAGGGGTCCTGG--GAGGGTT 5'& | || ||||||| &5' -----CTGGGTAGAACTCCCAA 3' Usp48 mmu-miR-199bstar beg:1013 end:1028 pic:3' CTTGTCCATCAGATTTGTGACCC 5'& ||| ||||.||| &5' ----------TCTCAACATTGG- 3' Usp48 mmu-miR-199bstar beg:1382 end:1394 pic:3' CTTGTCCATCAGATTTGTGACCC 5'& ||.||.||| &5' -------------AAGCATTGG- 3' Usp48 mmu-miR-19a beg:885 end:902 pic:3' AGTCAAAACGTATCTAAACGTGT 5'& ||| ||||||||. &5' --------GCAGCGATTTGCAT- 3' Usp48 mmu-miR-19b beg:885 end:902 pic:3' AGTCAAAACGTACCTAAACGTGT 5'& ||| ||||||||. &5' --------GCAGCGATTTGCAT- 3' Usp48 mmu-miR-201 beg:547 end:565 pic:3' TTCTTGTTACGGA-ATGACTCAT 5'& ||.| |.||||||| &5' --------TGTCAGTGCTGAGTA 3' Usp48 mmu-miR-202-5p beg:610 end:622 pic:3' TTTCTTCATATACGTATCCTT 5'& | ||||||| &5' ------------GGATAGGAA 3' Usp48 mmu-miR-202-5p beg:677 end:694 pic:3' TTTCTTCATATACGTATCCTT 5'& |.|| |.||||| &5' ---GGAGCTC---CGTAGGA- 3' Usp48 mmu-miR-203star beg:1886 end:1908 pic:3' ACAACTTGAC---AGTTCTTGGTGA 5'& |.|| |||.||||||| &5' -----AGCTACATTCAGGAACCAC- 3' Usp48 mmu-miR-207 beg:1122 end:1144 pic:3' CTCCCTCCTCTCGGTCCTCTTCG 5'& ||.| ||||||||||| ||| &5' ---GGGGCAGAGCCAGGAG-AGC 3' Usp48 mmu-miR-20bstar beg:1635 end:1655 pic:3' GATCTTCACGAGT-GTGACGTCA 5'& .|||| |. |||||||| &5' -----GGTGCCCGCCACTGCAG- 3' Usp48 mmu-miR-211 beg:605 end:616 pic:3' TCCGTTTCCTACTGTTTCCCTT 5'& ||.||||| &5' -------------CAGAGGGA- 3' Usp48 mmu-miR-212 beg:911 end:925 pic:3' ACCGGCACTGACCTCTGACAAT 5'& | ||.||||. &5' -----------GTGGATTGTTG 3' Usp48 mmu-miR-2132 beg:140 end:155 pic:3' GTAGCGCAGTTGTGGGCGG 5'& ||| |||..||| &5' ------GTCC-CACTTGCC 3' Usp48 mmu-miR-2134 beg:1279 end:1301 pic:3' CGTGGGGC--AAAGGGTTCTG 5'& .||| |||||||||.| &5' --GCCCACTCTTTCCCAAGGC 3' Usp48 mmu-miR-2134 beg:338 end:361 pic:3' CGTG-GGGCAAAGGGTTCTG 5'& ||. .|.|| |||||.||| &5' GCGGATCTGTGTCCCAGGAC 3' Usp48 mmu-miR-2135 beg:733 end:752 pic:3' CAAAGCCGG--GGT-TCTGGAGA 5'& ||| || .|||||| &5' ------GCCTTCCTCGGACCTC- 3' Usp48 mmu-miR-2135 beg:1924 end:1939 pic:3' CAAAGCCGGGGTTCTGGAGA 5'& |.|| ||.|.||| &5' -------CTCC-AGGCTTCT 3' Usp48 mmu-miR-2139 beg:1125 end:1149 pic:3' CGTCAATGGTCCTCGTCG-CGTCGA 5'& |||| .||||||| ||| ||| | &5' GCAGA-GCCAGGAG-AGCTGCA-C- 3' Usp48 mmu-miR-2140 beg:2241 end:2262 pic:3' TGGTGGT--TCTAGACGTGGA 5'& .||||.| ||| ||.| &5' GCCACTACCAGACATGTA--- 3' Usp48 mmu-miR-214 beg:541 end:567 pic:3' TGACGGACAGACACGGA-CGACA 5'& ||||.||||| ||||. |. || &5' ACTGTCTGTCAGTGCTGAGTAGT 3' Usp48 mmu-miR-214 beg:1862 end:1881 pic:3' TGACGGACAGACACGGACGACA 5'& ||. | || .|||||| &5' ---GCTAG-CTAT-TCTGCTG- 3' Usp48 mmu-miR-2146 beg:709 end:731 pic:3' GTGTACCTTGGGA-AGAGGTG 5'& ||| ||| |||||| &5' -ACAGCCCTCCCGCTCTCCA- 3' Usp48 mmu-miR-214star beg:166 end:189 pic:3' CGTGTCGTTCACATCTGTCCGT 5'& .||| ||..|||| &5' --GCAGATTGCACTGATGGGCA 3' Usp48 mmu-miR-218-1star beg:268 end:290 pic:3' CCACGAACTGCCTTGGTACAAA 5'& |. || |||.||||||| &5' ---GTAGGAGTGAATCATGTTT 3' Usp48 mmu-miR-2183 beg:226 end:249 pic:3' TCCTCCAG-TCCC-CAAGTT 5'& .||||| |||| | |.| &5' GGGAGGGAGAGGGCGAGCGA 3' Usp48 mmu-miR-21star beg:1803 end:1826 pic:3' CTGTCGGGT----AGCTGACGACAAC 5'& ||.|| || ||||||| &5' ----GCTCACTAATCCA-TGCTGTT- 3' Usp48 mmu-miR-221 beg:2060 end:2076 pic:3' CTTTGGGTCGTCTGTTACATCGA 5'& ||||.| ||||.|| &5' --------GCAGGC-ATGTGGC- 3' Usp48 mmu-miR-223 beg:1157 end:1172 pic:3' ACCCCATAAACTGTTTGACTGT 5'& || |.|||||| &5' ---------TGGAAGACTGAC- 3' Usp48 mmu-miR-22star beg:183 end:204 pic:3' ATTTCGAACGGTG-ACTTCTTGA 5'& ..|| || |||||.|| &5' --GGGCATCAGACTTGAAGGAC- 3' Usp48 mmu-miR-22star beg:464 end:488 pic:3' ATTTC-GAACGGTGACTTCTTGA 5'& ||.| ||||||| ||.|||| &5' -AAGGACTTGCCAACGAGGAAC- 3' Usp48 mmu-miR-27a beg:2063 end:2083 pic:3' CGCCTTGAATCGGTGACACTT 5'& || |. |.|||||||||| &5' --GGCATGTGGCCACTGTGA- 3' Usp48 mmu-miR-27astar beg:1624 end:1645 pic:3' AC-GAGTGTTCGTCGATTCGGGA 5'& | ||||||. |.|. |||| &5' -GCCTCACAGCCGGT---GCCC- 3' Usp48 mmu-miR-27astar beg:330 end:355 pic:3' ACGAGTGTTCGTC--GATTCGGGA 5'& |||||| |||.| ||. |.|| &5' -GCTCACTAGCGGATCTGTGTCC- 3' Usp48 mmu-miR-27b beg:1482 end:1504 pic:3' CGTCTTGAATCGGTGACACTT 5'& ||||| |||| ||||||||. &5' -CAGAAGTTAG-CACTGTGAG 3' Usp48 mmu-miR-27b beg:2064 end:2083 pic:3' CGTCTTGAATCGGTGACACTT 5'& ||| |.|||||||||| &5' GCATG---TGGCCACTGTGA- 3' Usp48 mmu-miR-2861 beg:2097 end:2117 pic:3' GGCGGG-CGGCGGTCCGGGG 5'& .||| | | ||.||||| &5' -TGCCGAGGC-CCGGGCCC- 3' Usp48 mmu-miR-292-3p beg:1060 end:1081 pic:3' TGTGAGTTTTGGACCGCCGTGAAA 5'& |||| ||| .||||.|| &5' --ACTCCCAACA---TGGCATTT- 3' Usp48 mmu-miR-296-3p beg:2150 end:2172 pic:3' CCTCTCGGAGGT--GGGTTGGGAG 5'& || || || ||||.|.|| &5' ---GA-CCCACATCCCCAGCTCT- 3' Usp48 mmu-miR-29bstar beg:1898 end:1918 pic:3' ATTTGGTGGTATACTTTGGTCG 5'& .|||||| ||||||| &5' -GAACCACATT---AAACCAG- 3' Usp48 mmu-miR-29bstar beg:1989 end:2012 pic:3' ATTTG-GTGGTATACTTTGGTCG 5'& |..|| |||.||.| |||||| &5' TGGACTCACTATGT--AACCAG- 3' Usp48 mmu-miR-300 beg:883 end:902 pic:3' CTTCTCTCGAACGG-GAACGTAT 5'& |.|| || .|||||| &5' -----GGGCA-GCGATTTGCAT- 3' Usp48 mmu-miR-301a beg:161 end:182 pic:3' CGAAACTGTTATGA-TAACGTGAC 5'& |.|| .| ||||||||| &5' ------ATAAAGCAGATTGCACTG 3' Usp48 mmu-miR-301b beg:161 end:182 pic:3' CGAAACTGTTATGG-TAACGTGAC 5'& |.|| .| ||||||||| &5' ------ATAAAGCAGATTGCACTG 3' Usp48 mmu-miR-301b beg:1773 end:1798 pic:3' CG-AAACTGTTATGGTA-ACGTGAC 5'& || ||||. ||||| ||| | &5' GCATTTGGACTTACCAGCTGC-C-- 3' Usp48 mmu-miR-3099 beg:1445 end:1468 pic:3' AGGGGTTGGAGAGAG-ATCGGAT 5'& |||.| |||.|||| |.|| &5' TCCTCCCCCTTTCTCTTGGC--- 3' Usp48 mmu-miR-3099star beg:220 end:242 pic:3' GTTCCCGACCTTCCTTCGACC 5'& .|||| |||.|||.|| || &5' TAAGG--TGGGAGGGAGAGGG 3' Usp48 mmu-miR-30a beg:272 end:293 pic:3' GAAGGTCAGCTC-CT----ACAAATGT 5'& ||| || |||||||| &5' ---------GAGTGAATCATGTTTACA 3' Usp48 mmu-miR-30b beg:272 end:293 pic:3' TCGACTCACATCCTACAAATGT 5'& ||||| ||||||||| &5' ----GAGTGAATCATGTTTACA 3' Usp48 mmu-miR-30bstar beg:588 end:611 pic:3' CTGCATTTGTAGGT-GTAGGGTC 5'& || | |||| ||||.||| &5' ---GTTTTCCTCCATCATCTCAG 3' Usp48 mmu-miR-30c beg:271 end:293 pic:3' CGACTCTCACATCCTACAAATGT 5'& .||||| ||||||||| &5' ----GGAGTGAATCATGTTTACA 3' Usp48 mmu-miR-30c-2star beg:1053 end:1070 pic:3' TCTCATTTGTCGGAAGAGGGTC 5'& |.|||.| |||||| &5' -GGGTAGAA------CTCCCA- 3' Usp48 mmu-miR-30c-2star beg:102 end:115 pic:3' TCTCATTTGTCGGAAGAGGGTC 5'& .|| |||.||| &5' ---------GGC--TCTTCCA- 3' Usp48 mmu-miR-30c-2star beg:1275 end:1297 pic:3' TCTCATTTGTCGGA----AGAGGGTC 5'& || |||| |.||||| &5' ------AAGAGCCCACTCTTTCCCA- 3' Usp48 mmu-miR-30e beg:273 end:293 pic:3' GAAGGTCAGTTCCTACAAATGT 5'& ||| || ||||||||| &5' -----AGTGAATCATGTTTACA 3' Usp48 mmu-miR-30estar beg:177 end:202 pic:3' CGAC-ATTTGTAGGCTG-ACTTTC 5'& ||| |...|||| ||| ||||.| &5' -CTGATGGGCATCAGACTTGAAGG 3' Usp48 mmu-miR-322 beg:1603 end:1624 pic:3' AGGTTTTGTACTTA--ACGACGAC 5'& .|.| |||| ||||||| &5' ----GAGC-TGAAGTGTGCTGCT- 3' Usp48 mmu-miR-322star beg:1071 end:1087 pic:3' CACAACGTCGCGAAGTACAAA 5'& .|| ||.|||||| &5' -------GGCA-TTTATGTTT 3' Usp48 mmu-miR-322star beg:268 end:290 pic:3' CACAACGTCGCGAAGTACAAA 5'& || | ||.| |||||||| &5' --GTAGGAGTGAATCATGTTT 3' Usp48 mmu-miR-325star beg:1644 end:1665 pic:3' TGTGAATGACTCGTGGATGATCC 5'& ||| |.| |||| |.||||.| &5' -CAC-TGCAGAGC-CTTACTGG- 3' Usp48 mmu-miR-328 beg:1409 end:1430 pic:3' TGCCTTCCCGTCTCTCCCGGTC 5'& ||| || | .||||.|| &5' ---GAAAGGTGGT-GGGGCTAG 3' Usp48 mmu-miR-33 beg:166 end:190 pic:3' ACGTT--ACGTTGATGTTACGTG 5'& |||. ||| |||. |||. &5' -GCAGATTGC-ACTGATGGGCAT 3' Usp48 mmu-miR-331-5p beg:1717 end:1740 pic:3' CCTAGGGACCCTGGTA-TGGATC 5'& ||||||||||| |. .|.| &5' GGATCCCTGGG-CTGCGGCTT-- 3' Usp48 mmu-miR-337-3p beg:1835 end:1846 pic:3' TCCGTAGTATATCCTCGACTT 5'& ||||||.. &5' -------------GAGCTGGG 3' Usp48 mmu-miR-338-3p beg:2048 end:2060 pic:3' GTTGTTTTAGTGACTACGACCT 5'& |.||||||. &5' -------------GGTGCTGGG 3' Usp48 mmu-miR-340-5p beg:1360 end:1383 pic:3' TTAGTCA-GAGTAACGAAATATT 5'& ||| .| | |||||.||| &5' ---CAGAGTTTGTGGCTTTGTAA 3' Usp48 mmu-miR-343 beg:223 end:239 pic:3' AGACCCGTGTACTTCCCTCT 5'& ||. |.||||||| &5' ----GGTG---GGAGGGAGA 3' Usp48 mmu-miR-343 beg:283 end:302 pic:3' AGACCCGTGTACTTCCCTCT 5'& || .||| .|||||| &5' --TGTTTACACTGAGGGAG- 3' Usp48 mmu-miR-346 beg:1744 end:1761 pic:3' TCTCCGTCCGTGAGCC-CGTCTGT 5'& .||.| ||||||| &5' ----------GCTTGAAGCAGACA 3' Usp48 mmu-miR-3470b beg:765 end:788 pic:3' GGTCGGACCAGATGTCTCACT 5'& || |||||.||| &5' CCTTAAGACTATACAGGGTG- 3' Usp48 mmu-miR-3471 beg:999 end:1021 pic:3' TTACGGAATGTCAACCTAGAGT 5'& .|||. |||| ||||||| &5' GATGTA-TACATGCTGATCTCA 3' Usp48 mmu-miR-3473 beg:712 end:731 pic:3' CCGACTCGGTAGAGAGGT 5'& || ||. ||||||| &5' -GCCCTCCCG-CTCTCCA 3' Usp48 mmu-miR-3474 beg:2032 end:2053 pic:3' CTTAGGTGCA-GAGGAGGGTCCC 5'& |.|| ||||||||||| &5' ----CTACTTCCTCCTCCCAGG- 3' Usp48 mmu-miR-3474 beg:1943 end:1964 pic:3' CTTAGGTGCAGAG-GAGGGTCCC 5'& ||| |.|| .||||||| &5' ---TCCTT-TTTCTTTCCCAGG- 3' Usp48 mmu-miR-3475 beg:477 end:499 pic:3' AAGTTTGGTACACGGAGGTCT 5'& |.|. | |||.||.|||| &5' --CGAGGAACGTGTCTTCAGA 3' Usp48 mmu-miR-34b-5p beg:740 end:758 pic:3' TGTTAGTCGATTAATGTGACGGA 5'& ||.| ||||||.| &5' ----TCGGACCT---CACTGCTT 3' Usp48 mmu-miR-34c beg:740 end:758 pic:3' CGTTAGTCGATTGATGTGACGGA 5'& ||.| || ||||||.| &5' ----TCGGAC--CT-CACTGCTT 3' Usp48 mmu-miR-361 beg:930 end:951 pic:3' CATGGGGACCTCTAAGACTATT 5'& ||. ||| || |||||| &5' GTGGCCC---AGTTGCTGATA- 3' Usp48 mmu-miR-374star beg:1838 end:1861 pic:3' GAGCCTGTT-ACTATTATGTTGG 5'& || ||. . || |||||.| &5' CTGGGGTGGCTGT--ATACAGC- 3' Usp48 mmu-miR-375 beg:1681 end:1701 pic:3' AGTGCGCTCGGCTTGCTTGTTT 5'& ||| || .||||||. &5' ---CGCAC-CCAC-TGAACAAG 3' Usp48 mmu-miR-383 beg:2020 end:2033 pic:3' TCGGTGTCAGTGGAAGACTAGA 5'& |||||||||| &5' ------------CTTCTGATCT 3' Usp48 mmu-miR-384-5p beg:271 end:293 pic:3' TGTAACGGATCCTTA------ACAAATGT 5'& |||||.| |||||||| &5' --------TAGGAGTGAATCATGTTTACA 3' Usp48 mmu-miR-384-5p beg:1067 end:1090 pic:3' TGTAACGGATCCTTAACAAATGT 5'& |||| || |||||.|| &5' ACATGGCATTTA---TGTTTGCA 3' Usp48 mmu-miR-411star beg:1496 end:1516 pic:3' CCAATCAC-CTGGCACAATGTAT 5'& ||| | .| |||.|||| &5' -----GTGAGGTTG-GTTGCATA 3' Usp48 mmu-miR-421 beg:799 end:819 pic:3' CGCGGGTTAATTACAGACAACTA 5'& |.||. ||||||| &5' ---CTCAGGATCA--CTGTTGA- 3' Usp48 mmu-miR-432 beg:1914 end:1934 pic:3' GACGGGTGACTAGAT----GAGGTTCT 5'& |||. |||||.| &5' ---------GATTATGAATCTCCAGG- 3' Usp48 mmu-miR-432 beg:371 end:391 pic:3' GACG-GGTGACTAGATGAGGTTCT 5'& |||| ||| |||||||| &5' CTGCTCCAA------ACTCCAAG- 3' Usp48 mmu-miR-449a beg:7 end:25 pic:3' TGGTCGATTGTTATGTGACGGT 5'& ||. |||. ||||||| &5' ACTCGCTG-------ACTGCCA 3' Usp48 mmu-miR-449a beg:738 end:758 pic:3' TGGTCGATTGTTATGTGACGGT 5'& || .|| ||||||. &5' -CCTCG-GACCT--CACTGCT- 3' Usp48 mmu-miR-449a beg:526 end:550 pic:3' TGGTCGATTGTTATGTGACGGT 5'& .||| || | |||||.| &5' GCCACCTCCCTGCTCACTGTC- 3' Usp48 mmu-miR-449b beg:738 end:758 pic:3' CGGTCGATTGTTGTGACGGA 5'& || .|| ||||||.| &5' -CCTCG-GACCTCACTGCTT 3' Usp48 mmu-miR-449c beg:742 end:758 pic:3' GGTCGATCGTTACGTGACGGA 5'& .| ||||||.| &5' ------GGACCT-CACTGCTT 3' Usp48 mmu-miR-449c beg:1786 end:1809 pic:3' GGTCGATCGTTACGT-GACGGA 5'& |||||| || |||. ||||. &5' CCAGCT-GCCATGTTCCTGCT- 3' Usp48 mmu-miR-450a-3p beg:2156 end:2168 pic:3' TACTTACGTTTCGTAGGGGTTA 5'& ||||||||. &5' ------------CATCCCCAG- 3' Usp48 mmu-miR-450a-3p beg:720 end:733 pic:3' TACTTACGTTTCGTAGGGGTTA 5'& || ||.|||.| &5' -----------GC-TCTCCAGT 3' Usp48 mmu-miR-450a-3p beg:1049 end:1071 pic:3' TACTTACGTTTCGTA---GGGGTTA 5'& ||| .|.| .||||| &5' -----TGCTGGGTAGAACTCCCAA- 3' Usp48 mmu-miR-450b-5p beg:1645 end:1657 pic:3' ATAAGTCCTTGTATGACGTTTT 5'& ||||||.|. &5' -------------ACTGCAGAG 3' Usp48 mmu-miR-465a-3p beg:293 end:315 pic:3' AGATGAATCTTTC----CGGGACTAG 5'& || || ||||||.|| &5' -------AGGGAGTGAAGCCCTGGTC 3' Usp48 mmu-miR-465b-3p beg:293 end:315 pic:3' AGATGAATCTTTC----CGGGACTAG 5'& || || ||||||.|| &5' -------AGGGAGTGAAGCCCTGGTC 3' Usp48 mmu-miR-465c-3p beg:293 end:315 pic:3' AGATGAATCTTTC----CGGGACTAG 5'& || || ||||||.|| &5' -------AGGGAGTGAAGCCCTGGTC 3' Usp48 mmu-miR-470 beg:537 end:563 pic:3' TGAGTGGTC-ACGGTCA-GGTTCTT 5'& .|||||.. ||.|||| | || &5' GCTCACTGTCTGTCAGTGCTGAG-- 3' Usp48 mmu-miR-483star beg:292 end:305 pic:3' TTCTGCCCTCCCCTCCTCACT 5'& | ||||||| &5' -----------GAGGGAGTGA 3' Usp48 mmu-miR-483star beg:221 end:245 pic:3' TTCTGCCCTCCC-CTCCTCACT 5'& ||| ||||||| |||| | || &5' AAGGTGGGAGGGAGAGG-GCGA 3' Usp48 mmu-miR-484 beg:1731 end:1753 pic:3' TAGCCCTCCCCTGACTCGGACT 5'& ||| |||.||| &5' --CGGCTTCCTCAC-AGCTTGA 3' Usp48 mmu-miR-485 beg:406 end:428 pic:3' CTTAAGTAG-TGCC--GGTCGGAGA 5'& ||| .| |||||||.| &5' ------ATCTGCTAACCCAGCCTTT 3' Usp48 mmu-miR-488 beg:430 end:452 pic:3' CTGGTTCTTTGTCGGAAAGTT 5'& ||| || .||||||| &5' -ACCTATACTCA-TCTTTCAA 3' Usp48 mmu-miR-493 beg:2372 end:2392 pic:3' GGACCGT-GTGTCATCCTGGAAGT 5'& ||| ||| |||||||.| &5' -CTGTTTCCAC----GGACCTTTA 3' Usp48 mmu-miR-497 beg:1604 end:1624 pic:3' ATGTTTGGTGTCACACGACGAC 5'& |.|.|.. ||||||||||| &5' --CGAGCTGAAGTGTGCTGCT- 3' Usp48 mmu-miR-497 beg:1040 end:1056 pic:3' ATGTTTGGTGTCACACGACGAC 5'& .| |||||||| &5' --------GCTTTCTGCTGCTG 3' Usp48 mmu-miR-503 beg:1801 end:1826 pic:3' GACGTCATGACAAGG-GCGACGAT 5'& |||| ||| ||| .||||.| &5' CTGCTC-ACTAATCCATGCTGTT- 3' Usp48 mmu-miR-503 beg:1037 end:1056 pic:3' GACGTCATGACAAGGGCGACGAT 5'& |.|| ||.|.||||||. &5' --GTAGC----TTTCTGCTGCTG 3' Usp48 mmu-miR-504 beg:1957 end:1972 pic:3' CTATCTCACGTCTGGTCCCAGA 5'& |||. ||||||.| &5' ---------CAGG-CAGGGTTT 3' Usp48 mmu-miR-505 beg:797 end:821 pic:3' TCTTTTG-GTCGTTC--ACAACTGC 5'& ||| ||| | |||||||| &5' ----AACTCAGGATCACTGTTGACG 3' Usp48 mmu-miR-509-5p beg:1827 end:1849 pic:3' TACTAAC-GGTGTAA-GACCTCAT 5'& .||| || | ||||.||. &5' ---GTTGTCCTCTGAGCTGGGGTG 3' Usp48 mmu-miR-511 beg:1122 end:1144 pic:3' ACTCACGTCTC-GTTTTC-CGTA 5'& |.| |||||| ||..|| || &5' -GGG-GCAGAGCCAGGAGAGC-- 3' Usp48 mmu-miR-511 beg:251 end:272 pic:3' ACTCA--CGTCTCGTTTTCCGTA 5'& ||| |||||||||.|| &5' -GAGCAGGCAGAGCAAGAG---- 3' Usp48 mmu-miR-540-3p beg:2007 end:2033 pic:3' GGTCCTAGC-----TGGAGACTGGA 5'& ||||||| ||.|||||.|| &5' CCAGGATAACCTTAACTTCTGATCT 3' Usp48 mmu-miR-542-5p beg:646 end:661 pic:3' AGCACTGTACTACTAGGGGCTC 5'& || |||||.|| &5' ---------GAGTATCCCTGA- 3' Usp48 mmu-miR-542-5p beg:2270 end:2292 pic:3' AGCACTGTACTACT-AGGGGCTC 5'& ||||.| ||||.||| &5' ---TGACGTCTTTATTCCCTGAG 3' Usp48 mmu-miR-615-5p beg:1200 end:1220 pic:3' CTAGGCTCGTGGC--CCCTGGGGG 5'& |.| ||. |||||||. &5' -----GGG-ACTCACGGGACCCT- 3' Usp48 mmu-miR-652 beg:1649 end:1670 pic:3' GTGTTGGGATCACCGCGGTAA 5'& || |.||.|| ||| ||. &5' CAGAGCCTTACTGGAGCT--- 3' Usp48 mmu-miR-654-3p beg:2049 end:2071 pic:3' TTCCACTACCAGT-CGTCTGTAT 5'& ||||| ||| ||||.|||. &5' -AGGTGCTGGGATTGCAGGCATG 3' Usp48 mmu-miR-654-3p beg:1293 end:1327 pic:3' TTCC----------ACTACCAGTCGTCTGTAT 5'& |||| ||| |||| ||||.|| &5' AAGGCCAAGACATTTGAAAGTCACCAGATAT- 3' Usp48 mmu-miR-665 beg:1146 end:1163 pic:3' TCCCTGGAGTCGGAGGACCA 5'& |||| |.|||||| &5' ----ACCTAC-CTTCCTGG- 3' Usp48 mmu-miR-666-5p beg:1624 end:1647 pic:3' CCGAGAGTGTCGA-CACGGGCGA 5'& || |||||||| |||||||| &5' -GC-CTCACAGCCGGTGCCCGC- 3' Usp48 mmu-miR-666-5p beg:1732 end:1756 pic:3' CCGA--GAGTGTCGACACGGGCGA 5'& |||| ||||||||| || || &5' GGCTTCCTCACAGCT-TGAA-GC- 3' Usp48 mmu-miR-668 beg:1414 end:1436 pic:3' CCATCACCCGGCTCGGCTCACTGT 5'& |||.||||| || .|||.|| &5' GGTGGTGGG----GCTAGGTGGCA 3' Usp48 mmu-miR-668 beg:11 end:34 pic:3' CCATCACCCGGCT--CGG---CTCACTGT 5'& ||.|| ||| ||||||| &5' --------GCTGACTGCCAAGGAGTGAC- 3' Usp48 mmu-miR-669e beg:1294 end:1307 pic:3' TACTTGTACGTGTGTGTTCTGT 5'& | .| ||||||| &5' ----------AGGC-CAAGACA 3' Usp48 mmu-miR-669e beg:345 end:362 pic:3' TACTTGTACGTGTGTGTTCTGT 5'& ||.. | ||.|||| &5' -------TGTGTCC-CAGGACA 3' Usp48 mmu-miR-671-3p beg:1823 end:1846 pic:3' CCACCT-CGGGACTCTTGGCCT 5'& ||| |.||| ||.|.||. &5' --TGGTTGTCCTCTGAGCTGGG 3' Usp48 mmu-miR-671-5p beg:1721 end:1743 pic:3' GAGGTCGGGGA--GGTCCCGAAGGA 5'& |||. |.. |||||||| &5' ------CCCTGGGCTGCGGCTTCCT 3' Usp48 mmu-miR-671-5p beg:1924 end:1950 pic:3' GAGGT-CGGGGAGGTCCCGAAGGA 5'& ||||| ||..||..| |.||||| &5' CTCCAGGCTTCTTTAT-GTTTCCT 3' Usp48 mmu-miR-672 beg:410 end:427 pic:3' AGTGTGTGTCATGTGGTTGGAGT 5'& .| || |||.|||. &5' ------GCTA-AC-CCAGCCTT- 3' Usp48 mmu-miR-673-3p beg:1145 end:1164 pic:3' CCACGTGTCT-TGAGTCGGGGCCT 5'& |||| || | .||.||| &5' ----CACACCTAC-CT-TCCTGGA 3' Usp48 mmu-miR-675-5p beg:1670 end:1690 pic:3' TGACACCCGGGAAAGGCGTGGT 5'& .|| | ||| ||||||| &5' GCTCA-GACCC---CCGCACC- 3' Usp48 mmu-miR-676star beg:2201 end:2221 pic:3' CGTTCAGGATTCCAACATCTCA 5'& |||| | |||||||| &5' -CAAG-CAAATG--TGTAGAGT 3' Usp48 mmu-miR-677 beg:1649 end:1665 pic:3' AGTCTTCGATTAGTAGTGACTT 5'& ||| ||| | |.||||.| &5' -CAG-AGC----C-TTACTGGA 3' Usp48 mmu-miR-677 beg:164 end:183 pic:3' AGTCTTCGATTAGTAGTGACTT 5'& |||| .||.. |||||| &5' ----AAGCAGATTG-CACTGA- 3' Usp48 mmu-miR-680 beg:309 end:332 pic:3' GGGGGTACAGTC------GTCTACGGG 5'& ||||| ||||||||| &5' -------GTCAGTCCACACAGATGCCC 3' Usp48 mmu-miR-682 beg:801 end:825 pic:3' GTCTGAAGTGAC-ACTGACGTC 5'& |||. |||||| |||| |.|| &5' CAGGA-TCACTGTTGACGGTAG 3' Usp48 mmu-miR-684 beg:27 end:47 pic:3' AACTGAACTTCCCTTTTGA 5'& |||| ||| ||||.|| &5' -TGACCAGAAAGGAAGAC- 3' Usp48 mmu-miR-689 beg:1181 end:1200 pic:3' CCTGGGGCGGCTCGCCCCTGC 5'& .||.||| .|||||| &5' ---TCCTGCCTT-TGGGGAC- 3' Usp48 mmu-miR-691 beg:1887 end:1904 pic:3' AAAAGACGGAGAGAAGTCCTTA 5'& ||. | |||||||| &5' ------GCTACA-TTCAGGAA- 3' Usp48 mmu-miR-693-3p beg:1127 end:1147 pic:3' AATGTCGGTGTAGACTTTCGACG 5'& | ||||| ||.|||||| &5' --AGAGCCAG----GAGAGCTGC 3' Usp48 mmu-miR-693-5p beg:1364 end:1377 pic:3' CTTTTGAAAGCCTACACCGAC 5'& | ||||||| &5' ----------GTTTGTGGCT- 3' Usp48 mmu-miR-696 beg:1626 end:1647 pic:3' GGGTGTCGTTCGTGTGCG 5'& |.|||||| .| | ||| &5' CTCACAGCCGGTGCCCGC 3' Usp48 mmu-miR-705 beg:1139 end:1160 pic:3' ACGG-GTG-GGGTGGAGGGTGG 5'& ||. ||| ||.||||.|| &5' -GCTGCACACCTACCTTCC--- 3' Usp48 mmu-miR-705 beg:1670 end:1694 pic:3' ACGGGT---GGGGTGGAGGGTGG 5'& ||.|| ||||.| |||||. &5' -GCTCAGACCCCCGCA-CCCACT 3' Usp48 mmu-miR-706 beg:2228 end:2244 pic:3' AAAAAACTCTGTCCCAAAGAGA 5'& |||||. ||||.|. &5' -----TGAGAT---GTTTTTT- 3' Usp48 mmu-miR-708star beg:1817 end:1832 pic:3' GATCTTCGAGTGTCAGATCAAC 5'& ||| ||.|.|||| &5' ------GCT----GTTTGGTTG 3' Usp48 mmu-miR-709 beg:2027 end:2046 pic:3' AGGAGGACGGAGACGGAGG 5'& ||.|||| ||. ||||| &5' TCTTCCTA-CTT--CCTCC 3' Usp48 mmu-miR-709 beg:722 end:742 pic:3' AGGAGGACGGAGACGGAGG 5'& .|||| | .|||||||.| &5' -TCTCCAG-TTCTGCCTTC 3' Usp48 mmu-miR-710 beg:456 end:476 pic:3' GAGTTGAGAGGGGTTCTGAACC 5'& | ||| |.|||||| &5' -TGAACGTGA---AGGACTTG- 3' Usp48 mmu-miR-713 beg:537 end:559 pic:3' CGACACACGGA-AGTCACGT 5'& ||| ||.|| ||||||| &5' GCTCACTGTCTGTCAGTGC- 3' Usp48 mmu-miR-721 beg:169 end:182 pic:3' AAGGGGGAAAATTAACGTGAC 5'& .||||||||| &5' -----------GATTGCACTG 3' Usp48 mmu-miR-741 beg:1015 end:1039 pic:3' AGATGTATCTTACCGTAGAGAGT 5'& || |||| |. ||||||.|. &5' TCAACATTGGCA-GCATCTTTT- 3' Usp48 mmu-miR-742 beg:1203 end:1227 pic:3' AAATGGGTCGTACC----ACCGAAAG 5'& ||.|| |. || |||||||| &5' ---ACTCA-CG-GGACCCTGGCTTTC 3' Usp48 mmu-miR-742 beg:1357 end:1379 pic:3' AAATGGGTCGTAC-CACCGAAAG 5'& |||||| |||||||| &5' ---ACCCAGAGTTTGTGGCTTT- 3' Usp48 mmu-miR-742 beg:64 end:86 pic:3' AAATGGGTCGTAC-CACCGAAAG 5'& ||| || ||||.||| &5' -TTAA--AGAAAACGTGGTTTT- 3' Usp48 mmu-miR-743b-5p beg:1682 end:1699 pic:3' ACTACCTGTGGTCAGACTTGT 5'& .|||| ||||||| &5' ------GCACCCA-CTGAACA 3' Usp48 mmu-miR-743b-5p beg:1823 end:1842 pic:3' ACTACCTGT-GGTCAGACTTGT 5'& ||| || |||||.| &5' ---TGGTTGTCC--TCTGAGC- 3' Usp48 mmu-miR-743b-5p beg:236 end:259 pic:3' ACTACCTG--TGGTCA-GACTTGT 5'& || ||.| .| || ||||.|| &5' -GA-GGGCGAGCGAGGACTGAGCA 3' Usp48 mmu-miR-744 beg:1669 end:1688 pic:3' ACGACAATCGGGATC--GGGGCGT 5'& |||.| || ||||||| &5' -------AGCTC-AGACCCCCGCA 3' Usp48 mmu-miR-744star beg:1022 end:1033 pic:3' TCCAACTCCAATCACCGTTGTC 5'& |||||.|| &5' -------------TGGCAGCA- 3' Usp48 mmu-miR-744star beg:625 end:645 pic:3' TCCAACTC-CAA-TCACCGTTGTC 5'& || ||| .||||||.|| &5' ------AGTGTTCGGTGGCAGCA- 3' Usp48 mmu-miR-760 beg:1736 end:1756 pic:3' AGGGGTGTCTGGGTCTCGGC 5'& |||.||||| |.. ||| &5' TCCTCACAG-CTTGAAGC-- 3' Usp48 mmu-miR-760 beg:1639 end:1659 pic:3' AGGGGTGTCTGG-GTCTCGGC 5'& |||.| ||. ||||||| &5' --CCCGCC-ACTGCAGAGCC- 3' Usp48 mmu-miR-760 beg:1345 end:1369 pic:3' AGGGGTG--TCT--GGGTCTCGGC 5'& |||..| ||| |||||||.. &5' TCCTTAGAAAGAAACCCAGAGTT- 3' Usp48 mmu-miR-761 beg:1034 end:1055 pic:3' ACACAGTCAAAGTGGGACGACG 5'& | || | ..||||||| &5' ----TTGGTAGCTTTCTGCTGC 3' Usp48 mmu-miR-761 beg:1859 end:1881 pic:3' ACACAGTCAAA---GTGGGACGACG 5'& ||| .|..|||||| &5' -----CAGGCTAGCTATTCTGCTG- 3' Usp48 mmu-miR-762 beg:407 end:427 pic:3' CGAGACAGGGCCGGGGTCGGGG 5'& |||| |. |||||||.. &5' --TCTG-CTAA--CCCAGCCTT 3' Usp48 mmu-miR-762 beg:2148 end:2172 pic:3' CGAGACAGGGCC--GGGGTCGGGG 5'& ||| ||| |||||||.|. &5' ---CTGACCCACATCCCCAGCTCT 3' Usp48 mmu-miR-763 beg:1774 end:1796 pic:3' CGGTGACCAAGAAGGGTCGACC 5'& || .||| ||| ||||||| &5' GCATTTGGA-CTTACCAGCTG- 3' Usp48 mmu-miR-763 beg:926 end:945 pic:3' CGGTGACCAAGAA--GGGTCGACC 5'& |||. |||||.|| &5' -------GTTTGTGGCCCAGTTG- 3' Usp48 mmu-miR-7a beg:99 end:115 pic:3' TGTTGTTTTAGTGATC-AGAAGGT 5'& | ||.| ||||||| &5' ----------C-CTGGCTCTTCCA 3' Usp48 mmu-miR-7a beg:578 end:598 pic:3' TGTTGTTTTAGTGATCAGAAGGT 5'& . || .|| | |||.|||| &5' GTGACT--GTCTC-AGTTTTCC- 3' Usp48 mmu-miR-7b beg:96 end:115 pic:3' TGTTGTTTTAGTGT-TC-AGAAGGT 5'& |.|| .| ||||||| &5' ---------TTACCTGGCTCTTCCA 3' Usp48 mmu-miR-7b beg:578 end:598 pic:3' TGTTGTTTTAGTGTTCAGAAGGT 5'& . || .|| | |||.|||| &5' GTGACT--GTCTC-AGTTTTCC- 3' Usp48 mmu-miR-875-3p beg:200 end:219 pic:3' GTATCGGAGTCATAAAAGTCC 5'& |.| |..|||| |||||| &5' CGT-GTTTCAG-ATTTTC--- 3' Usp48 mmu-miR-876-3p beg:1543 end:1564 pic:3' ACTTAATGAAACATT--TGGTGAT 5'& .| |||| .|||.|| &5' ------GCAAGGTAATAGCCATTA 3' Usp48 mmu-miR-876-3p beg:2318 end:2340 pic:3' ACTTAATGA-AACATTTGGTGAT 5'& |||.| ||| .||.||||. &5' ----TTATTATTGAGAATCACTG 3' Usp48 mmu-miR-876-3p beg:2233 end:2251 pic:3' ACTTAATGAAACATT---TGGTGAT 5'& ||| .|||||| &5' ----------TGTTTTTTGCCACTA 3' Usp48 mmu-miR-879 beg:1642 end:1661 pic:3' CCGAATCTCGATATTCGGAGA 5'& || || .|||||. &5' -GCCACT-GCA--GAGCCTT- 3' Usp48 mmu-miR-881 beg:1565 end:1586 pic:3' AGATAAGTCTTTTCTGTGTCAA 5'& ||. ||||. || |.||||| &5' -CTG-TCAGGCAA-ATACAGT- 3' Usp48 mmu-miR-881star beg:890 end:909 pic:3' TCTACACTGACAAT-AGAGAGAC 5'& | ||.| |.||||| &5' ----GCGATTTGCATTTTCTCT- 3' Usp48 mmu-miR-9 beg:11 end:29 pic:3' AGTATGTCGATCTATTGGTTTCT 5'& ||| || .||||.|| &5' -------GCT-GACTGCCAAGGA 3' Usp48 mmu-miR-93 beg:885 end:905 pic:3' GATGGACGT-GCTTGTCGTGAAAC 5'& ||| ||| |||.||| &5' ------GCAGCGATTTGCATTTT- 3' Usp48 mmu-miR-96 beg:2083 end:2106 pic:3' TCGTTTTTACACGATCACGGTTT 5'& .|. |||||| |||||.|. &5' GGTTTCC-TGTGCT-GTGCCGAG 3' Usp48 mmu-miR-98 beg:776 end:798 pic:3' TTGTTATGTTGA--ATGATGGAGT 5'& |||||. |.||.||||| &5' ----ATACAGGGTGTGCTGCCTCA 3' Usp48 mmu-miR-712 beg:453 end:472 pic:3' CCATGGCGGGCC--CACTTCCTC 5'& || .| |||||||| &5' ------GCATGAACGTGAAGGA- 3' Usp48 mmu-miR-466h beg:1132 end:1151 pic:3' ATGTGTGTTCGTGTACGTGTGT 5'& .| || .|| .| ||||||| &5' -GC-CAGGAGAGC-TGCACAC- 3' Usp48 mcmv-miR-m01-2 beg:1446 end:1465 pic:3' TGGCAAGGTTGGGCTAAGAGAAG 5'& |||| ||| ||||||| &5' ----TTCCTCCCCCTTTCTCTT- 3'

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 Usp48; Kiaa4202 mmu-miR-103 1156 1163 ----------AGUAUCG-GGACA-----------UGUUACGACGA || || ||||| : |||||||| GCCUGCAAGGUCU--GCUCCUGUGUCGUCAAUUGGGAAUGCUGCC Usp48; Kiaa4202 mmu-miR-107 1156 1163 A-------CUAU-CG-GGACA-----------UGUUACGACGA |:| || ||||| : |||||||| GCCUGCAAGGUCUGCUCCUGUGUCGUCAAUUGGGAAUGCUGCC Usp48; Kiaa4202 mmu-miR-130a 2180 2187 U-----------ACGGGAAAAU----------UGUAACGUGAC ||||:| | ||||||||| GACUGUCCCACUUGCCUUAUGUCAAAUAAAGCAGAUUGCACUGA Usp48; Kiaa4202 mmu-miR-130b 2180 2187 U-----------ACGGGAAAGUAG-----------UAACGUGAC ||||:| :|| ||||||||| GACUGUCCCACUUGCCUUAU-GUCAAAUAAAGCAGAUUGCACUGA Usp48; Kiaa4202 mmu-miR-148b 2181 2188 ------------------------UGUUUCAAGACACUACGUGACU |:|||| |||||||| ACUGUCCCACUUGCCUUAUGUCAAAUAAAGCAGAU---UGCACUGAU Usp48; Kiaa4202 mmu-miR-152 2181 2188 -----GGGUUCAAG----ACAGU------------ACGUGACU |||| ||||| |||||||| ACUGUCCCACUUGCCUUAUGUCAAAUAAAGCAGAUUGCACUGAU Usp48; Kiaa4202 mmu-miR-15a 915 922 GU-------------------GUUUG--GUAAUACACGACGAU |||: || |||||||| UCCCAAAGGCUCCCGAGUUCCCAAGUUACAGAGAGUGCUGCUC Usp48; Kiaa4202 mmu-miR-15b 915 922 ACAUU----------------------UGGUACUACACGACGAU || || |||||||| UCCCAAAGGCUCCCGAGUUCCCAAGUUACAGAGA-GUGCUGCUC Usp48; Kiaa4202 mmu-miR-16 915 922 GC------------------GGUUAUAAAUG-----CACGACGAU |||| |||| |||||||| UCCCAAAGGCUCCCGAGUUCCCAAG--UUACAGAGAGUGCUGCUC Usp48; Kiaa4202 mmu-miR-17-3p 1266 1273 A----------------------UGUUC-ACGGGAGUGACGUCA : |:| || || |||||||| GUCAACCUUUAGAGAGAAGAGAAGGAGGCUGGCC-CACUGCAGC Usp48; Kiaa4202 mmu-miR-181a 1546 1553 --------------------UGAGU-GGCUGUCGCAACUUACAA ||||: || |: ||||||||| UAACAAAAAGGUGAUGAAGGACUCGGCCCCCGA-GUUGAAUGUG Usp48; Kiaa4202 mmu-miR-181b 1546 1553 --------------------------GGGUGGCUGUCGUUACUUACAA ||| |||| |: ||||||| UAACAAAAAGGUGAUGAAGGACUCGGCCC-CCGA--GU--UGAAUGUG Usp48; Kiaa4202 mmu-miR-181c 1546 1553 --------------------UGAGU-GGCUGUCCAACUUACAA ||||: || |: ||||||||| UAACAAAAAGGUGAUGAAGGACUCGGCCCCCGAGUUGAAUGUG Usp48; Kiaa4202 mmu-miR-181d 1546 1553 ------------------------UUGGGUGGCUGUUGUUACUUACAA ::||| |||| ||||||| UAACAAAAAGGUGAUGAAGGACUCGGCCC-CCGAGU----UGAAUGUG Usp48; Kiaa4202 mmu-miR-195 915 922 C-------------------GGUUAUAAAGA---CACGACGAU |||| |||||||| UCCCAAAGGCUCCCGAGUUCCCAAGUUACAGAGAGUGCUGCUC Usp48; Kiaa4202 mmu-miR-205 600 607 GU-----------------------CUGAGGCCACCUUACUUCCU || :|| ||||||||: AUUACAAAGCUGUCAACAAUUUGCUGAAAUCGAC--AAUGAAGGGU Usp48; Kiaa4202 mmu-miR-205 1524 1531 G-----------UCUGAGGCCA---------CC-UUACUUCCU || | :|| || :|||||||| UCUAUGUCCACAAGGUUGUGGAUAACAAAAAGGUGAUGAAGGAC Usp48; Kiaa4202 mmu-miR-207 1601 1608 CUC-----------CCUCCUC----UCGG-----UCCUCUUCG ||||||| |||| :||||||| ACGGAAGAAGACAAGGAGGAGGCUAAGCCAGAUGGGGAGAAGG Usp48; Kiaa4202 mmu-miR-214 282 289 --------------------GACGGACAGA-C-ACGGACGACA |||: | ||||||||| AGCACGAGGAGGUGAAGGAGCUGUACCAAAGGUUGCCUGCUGG Usp48; Kiaa4202 mmu-miR-23a 1548 1555 C------------CUUUAGGGACCG----------UUACACUA |||: | ||| ||||||| ACAAAAAGGUGAUGAAGGACUCGGCCCCCGAGUUGAAUGUGAG Usp48; Kiaa4202 mmu-miR-24 292 299 GA-------------------CAA-GGACGA-CUUGACUCGGU ||| |||||| ||:||||||| GGUGAAGGAGCUGUACCAAAGGUUGCCUGCUGGAGCUGAGCCC Usp48; Kiaa4202 mmu-miR-27a 489 496 C---------------GCCUUGAAUCGG--------UGACACUU :|||: :|:| |||||||| UUUUCUAUAGUCGAUAUGGAGGA-GGUCCAAGACUAACUGUGAAA Usp48; Kiaa4202 mmu-miR-27b 489 496 --------------------CGUCUUGAAUC-GG-UGACACUU | || | || |: |||||||| UUUUCUAUAGUCGAUAUGGAGGAGGUCCAAGACUAACUGUGAAA Usp48; Kiaa4202 mmu-miR-300 965 972 ---------------------CUUCUCUCGAACGGGAACGUAU ||||| ||||||||| AAGAUACUAGAACGAGAAGGUGAAGAAAACGAAGCCUUGCAUAA Usp48; Kiaa4202 mmu-miR-301 2180 2187 CGAAAC-------------------UGUUAUGA-UAACGUGAC |:|| :| ||||||||| GACUGUCCCACUUGCCUUAUGUCAAAUAAAGCAGAUUGCACUGA Usp48; Kiaa4202 mmu-miR-301b 2180 2187 ------------ACG-AA-ACUGUUA----UGG-UAACGUGAC ||| || || ||| :| ||||||||| GACUGUCCCACUUGCCUUAUGUCAAAUAAAGCAGAUUGCACUGA Usp48; Kiaa4202 mmu-miR-30a-5p 1189 1196 ----------GAAGGU-CAG------CUCC----UACAAAUGU ||||:: ||| |||| ||||||||| GAAUGCUGCCCUUCUGUGUCCACAUGGAGGACUCAUGUUUACAU Usp48; Kiaa4202 mmu-miR-30b 1189 1196 U---CGACU------CACA--------UCC----UACAAAUGU |||| |||| ||| ||||||||| GAAUGCUGCCCUUCUGUGUCCACAUGGAGGACUCAUGUUUACAU Usp48; Kiaa4202 mmu-miR-30b 2291 2298 ---------UCGACUCA----CAUCC--------UACAAAUGU :|| ||| ||||| ||||||||| GACUGAGCAGGCAGAGCAAGAGUAGGAGUGAAUCAUGUUUACAC Usp48; Kiaa4202 mmu-miR-30c 2291 2298 ----------CGACUC--UCACAUCC--------UACAAAUGU || ||| || ||||| ||||||||| GACUGAGCAGGCAGAGCAAGAGUAGGAGUGAAUCAUGUUUACAC Usp48; Kiaa4202 mmu-miR-30d 1189 1196 ----------GAAGGU-CAG-----CC-CC----UACAAAUGU ||||:: ||| || || ||||||||| GAAUGCUGCCCUUCUGUGUCCACAUGGAGGACUCAUGUUUACAU Usp48; Kiaa4202 mmu-miR-30e 1189 1196 ------------------AGGUC-AGUUCC----UACAAAUGU |||| | :||| ||||||||| GAAUGCUGCCCUUCUGUGUCCACAUGGAGGACUCAUGUUUACAU Usp48; Kiaa4202 mmu-miR-322 2288 2295 A-----------------------CAACGUCGCGAAGUACAAA || | ||:| |||||||| GAGGACUGAGCAGGCAGAGCAAGAGUAGGAGUGAAUCAUGUUUA Usp48; Kiaa4202 mmu-miR-335 657 664 ----------------UGUAAAAA--GCAAUAA--CGAGAACU :|:| || |||||||| UAGGAAAGUCUUCCUUGCGUAGCUGGCGCCAGCUGGCUCUUGAA Usp48; Kiaa4202 mmu-miR-337 289 296 --------------------UUUCCGUAGUAUAUCCUCGACUU |||||: ||||||||: GGAGGUGAAGGAGCUGUACCAAAGGUUGCCUGCUGGAGCUGAGC Usp48; Kiaa4202 mmu-miR-338 87 94 AGUUGUUUU----AGUGAC----------------UACGACCU ::||||: |||||| ||||||| GUGGCAAAGGAACUCACUGCUCCCGAAAUGCAUACAUGCUGGU Usp48; Kiaa4202 mmu-miR-340 1563 1570 -------CCG------------AUAUUUCAUU--GACUCUGCCU ||| |:|:| |||: |||||||||| AGGACUCGGCCCCCGAGUUGAAUGUGA-GUAGUUCUGAGACGGAA Usp48; Kiaa4202 mmu-miR-412 257 264 UGCCGAUCACCUGG---------------------UCCACUUCA |||||| |||||||| CAGAGU-GUGGACAAAGGCAAAGCGAAGCACGAGGAGGUGAAGG Usp48; Kiaa4202 mmu-miR-412 948 955 ---UGCCGA---UCAC--------------CUGGUCCACUUCA :| ||| |||| || |||||||| AGUGCUGCUCGCAGUGCAAGAUACUAGAACGAGAAGGUGAAGA Usp48; Kiaa4202 mmu-miR-424 915 922 A-------------------GGUUU--UGUA-CUUAACGACGAC ||||: ||| ||: ||||||| UCCCAAAGGCUCCCGAGUUCCCAAGUUACAGAGAG-UGCUGCUC Usp48; Kiaa4202 mmu-miR-450b* 879 886 U-----------------------ACGUACGUUUUACAAGGGUUA |||| |||: ||||||| UUUCUCAGGAGGCUUGGAGCAAGCUGCA-GCAGUAC-UUCCCAAA Usp48; Kiaa4202 mmu-miR-470 479 486 --------------------AGUG--GUCACGGUCAGGUUCUU ||: ::| | :|||||||| GCGGCUAACAUUUUCUAUAGUCGAUAUGGAGGAGGUCCAAGAC Usp48; Kiaa4202 mmu-miR-483 187 194 UGUUCU-GCCC-UCCC------------------CUCCUCACU ||||| | || || ||||||||: UCAAGAGCUGGUAGAUCGUGAUAAUUCCAAAUUCGAGGAGUGGU Usp48; Kiaa4202 mmu-miR-483 2279 2286 UGUUCUGC-C-CUCC--------------------CCUCCUCACU |:|:|| | |||| | |||||||| --AGGGCGAGCGAGGACUGAGCAGGCAGAGCAAGAGUAGGAGUGAA Usp48; Kiaa4202 mmu-miR-497 915 922 AU-------------------GUUUGGUGUCA--CACGACGAC |||: |||| |||||||| UCCCAAAGGCUCCCGAGUUCCCAAGUUACAGAGAGUGCUGCUC Usp48; Kiaa4202 mmu-miR-546 1482 1489 C----------------------------UGAGGCACGGUGGUA || || |||||||| GCCAGCAGCAGAGGGACCUUCGAGAGUAUAC-CCAAGCCACCAUC Usp48; Kiaa4202 mmu-miR-547 1636 1643 ---------------------AGUGA-GUU-UCUACAUGGUUC ||| ||| :|| |||||||| GGAGAAGGAUCCUGACUUUAAUCAAAGCAAUGGAAGUACCAAGC Usp48; Kiaa4202 mmu-miR-668 2033 2040 CCAUCACC--------------CGGCU--CGG---CUCACUGU ||:|| ||| ||||||| GGACAUUAAUCUUUGACUACUCGCUGACUGCCAAGGAGUGACC Usp48; Kiaa4202 mmu-miR-674* 264 271 AACAAGA-------------------CUCUAC--CCUCGACAC |||:|| |||||||| UGGACAAAGGCAAAGCGAAGCACGAGGAGGUGAAGGAGCUGUA Usp48; Kiaa4202 mmu-miR-680 2330 2337 G-----------------GGGGUACAGUC------GUCUACGGG |||:: ||||| ||||||||| UACACUGAGGGAGUGAAGCCCUG-GUCAGUCCACACAGAUGCCCU Usp48; Kiaa4202 mmu-miR-694 1793 1800 G------------------AAGUC-----CGU-UGUAAAAGUC ||||| ||| :||||||||| ACGUUAAAAGAAUUGAAGAUUCAGAUCAUGCACGCAUUUUCAGU Usp48; Kiaa4202 mmu-miR-701 444 451 AG----------------------GUAGAUAAAGUCGCCGAUU :||| |||||||| AUAAAAUAUCAAUUAUGAAGAGAAUAUCGGAAUAUGCGGCUAAC Usp48; Kiaa4202 mmu-miR-706 843 850 AAAAAAC----------------------UCUGUCCCAAAGAGA ||:| |||||||| GAGAGUUAAGCAUAUCUGAAAAUGAAAGAAGGCU-GGUUUCUCA Usp48; Kiaa4202 mmu-miR-712 259 266 CCA---------------------UG-GCGGGCCCACUUCCUC :| || |||||||||| GAGUGUGGACAAAGGCAAAGCGAAGCACGAGGAGGUGAAGGAGC Usp48; Kiaa4202 mmu-miR-718 1102 1109 GC---UGUGGGCCGGC-------------------CCGCCUUC |:|:: |:|| ||||||| UCUCUAUAUUGUGUCGCACUUCUUUUUAGAUGAAUGGCGGAAA Usp48; Kiaa4202 mmu-miR-719 207 214 UUGUAAAAAGAC---------------------AUCGGCUCUA |:|||||||| AUAAUUCCAAAUUCGAGGAGUGGUGUGUAGAAAUGGCCGAGAUG Usp48; Kiaa4202 mmu-miR-721 2180 2187 A----AGGGGGAAAA------------------UUAACGUGAC |||| ||| :||||||||| GACUGUCCCACUUGCCUUAUGUCAAAUAAAGCAGAUUGCACUGA Usp48; Kiaa4202 mmu-miR-761 282 289 AC-------------------ACAG-----UCAAAGUGGGACGACG ||| :||| ||||||| AGCACGAGGAGGUGAAGGAGCUGUACCAAAGGUUG---CCUGCUGG Usp48; Kiaa4202 mmu-miR-763 650 657 -----------------------CGG--UGACCAAGAAGGGUCGACC || :|||| |||||||| UUUUGGGUAGGAAAGUCUUCCUUGCGUAGCUGGCG----CCAGCUGGC Usp48; Kiaa4202 mmu-miR-770-3p 1261 1268 GGUCGAGGUGCAGU--------------------------CCGGGUGC |||: |||| ||||||| A---CUCU--GUCAACCUUUAGAGAGAAGAGAAGGAGGCUGGCCCACU Usp48; Kiaa4202 mmu-miR-804 62 69 A------------------GGUCCACUCC---UUGUUGAGUGU ||| ||| || |: ||||||| AAAUCCCAGACCCGUAAACCCAAGUGUGGCAAAGGAACUCACU Usp48; Kiaa4202 mmu-miR-9 271 278 GUA------------------------UGUCGAUCUAUUGGUUUCU : ||||: |||||||: AGGCAAAGCGAAGCACGAGGAGGUGAAGGAGCUGU---ACCAAAGGU Usp48; Kiaa4202 mmu-miR-103 1140 1163 aguAUCGG--GACAUGUUACGACGa | |:| :|| : |||||||| gtgTCGTCAATTG-GGAATGCTGCc Usp48; Kiaa4202 mmu-miR-107 1139 1163 AC-UAUCGG--GACAUGUUACGACGa || :| |:| :|| : |||||||| TGTGTCGTCAATTG-GGAATGCTGCc Usp48; Kiaa4202 mmu-miR-130a 2163 2187 UACGGGAAAAUU-G--UAACGUGAC |||:| | || | ||||||||| ATGTCAAATAAAGCAGATTGCACTG Usp48; Kiaa4202 mmu-miR-130b 2156 2187 uACGGGA-A-AG--UA----G--UAACGUGAC ||||:| | || || | ||||||||| tTGCCTTATGTCAAATAAAGCAGATTGCACTG Usp48; Kiaa4202 mmu-miR-148b 2170 2188 UGUUUCAAGACACUACGUGACU |:|||| | | |||||||| ATAAAG--CAG-ATTGCACTGA Usp48; Kiaa4202 mmu-miR-152 2151 2188 GGGU--UC--AAGACAGU------------ACGUGACU |||| | || ||||| |||||||| CCCACTTGCCTTATGTCAAATAAAGCAGATTGCACTGA Usp48; Kiaa4202 mmu-miR-15a 899 922 GUGUUUG--GUAAUACACGACGAu | |||:: || : |||||||| CCCAAGTTACAGAGAGTGCTGCTc Usp48; Kiaa4202 mmu-miR-15b 902 922 acauuUGGUACUACACGACGAu || : || |||||||| aagttACAGAGA-GTGCTGCTc Usp48; Kiaa4202 mmu-miR-16 898 922 gcGGUUAUAAAUG-----CACGACGAu ||| | |||| |||||||| tcCCA--AGTTACAGAGAGTGCTGCTc Usp48; Kiaa4202 mmu-miR-17-3p 1253 1273 augUUC-ACGGGAGUGACGUCa |:| || || |||||||| aggAGGCTGGCC-CACTGCAGc Usp48; Kiaa4202 mmu-miR-181a 1531 1553 UGAGUGGCUGUCGCAACUUACAa ||||: | | | ||||||||| ACTCGGCCCCCGAGTTGAATGTg Usp48; Kiaa4202 mmu-miR-181b 1537 1553 GGGUGGCUGUCGUUACUUACAa ||| ||| ||: ||||||| CCC-CCG--AGT--TGAATGTg Usp48; Kiaa4202 mmu-miR-181c 1531 1553 UGAG-UGGCUGUCCAACUUACAa |||| :|| |: ||||||||| ACTCGGCCCCCGAGTTGAATGTg Usp48; Kiaa4202 mmu-miR-181d 1535 1553 uuGGGUGGCUGUUGUUACUUACAa ||| |||| : ||||||| ggCCC-CCGA----GTTGAATGTg Usp48; Kiaa4202 mmu-miR-195 899 922 cGGUUAUAAAG----ACACGACGAu |||| :|| | |||||||| cCCAA-GTTACAGAGAGTGCTGCTc Usp48; Kiaa4202 mmu-miR-205 1512 1531 gucugaggCCACCUUACUUCCU |||| |||||||| aacaaaaaGGTG--ATGAAGGA Usp48; Kiaa4202 mmu-miR-205 588 607 GUCUGAGGCCACCUUACUUCCu | || :|| |||||||| CTGAAATCG--ACAATGAAGGg Usp48; Kiaa4202 mmu-miR-207 1577 1608 cUCCCUCCUC----UCGGU-----CCUCUUCg | ||||||| ||||| ||||||| cAAGGAGGAGGCTAAGCCAGATGGGGAGAAGg Usp48; Kiaa4202 mmu-miR-214 267 289 GAC--GG---ACAGACACGGACGACa ||| || || ||||||||| CTGTACCAAAGGT---TGCCTGCTGg Usp48; Kiaa4202 mmu-miR-23a 1529 1555 CCU---UUAGGGAC-CG--UUACACUa ||| :: ||| | |: ||||||| GGACTCGGCCCCCGAGTTGAATGTGAg Usp48; Kiaa4202 mmu-miR-24 276 299 gaCAA-GGACGA-CUUGACUCGGu ||| |||||| ||:||||||| agGTTGCCTGCTGGAGCTGAGCCc Usp48; Kiaa4202 mmu-miR-27a 472 496 CGCCUU--GAAUCGG--UGACACUU | |||: | || | |||||||| GAGGAGGTCCAAGACTAACTGTGAA Usp48; Kiaa4202 mmu-miR-27b 474 496 CGUCUUGAAUCGG--UGACACUU | ||: | || | |||||||| GGAGGTCCAAGACTAACTGTGAA Usp48; Kiaa4202 mmu-miR-300 951 972 CUUCUCUCGAACGGGAACGUAU ||||| | | ||||||||| GAAGAAAACGAAGCCTTGCATA Usp48; Kiaa4202 mmu-miR-301 2159 2187 cGAA-ACUG-UUAU---G-AUAACGUGAC ||| || | |||| | ||||||||| cCTTATGTCAAATAAAGCAGATTGCACTG Usp48; Kiaa4202 mmu-miR-301b 2157 2187 AC-GAA-ACUG-UUAU---G-GUAACGUGAC || ||| || | |||| | ||||||||| TGCCTTATGTCAAATAAAGCAGATTGCACTG Usp48; Kiaa4202 mmu-miR-30a-5p 1170 1196 gaAGGU-CAGCUCC----UACAAAUGU |||| | |||| ||||||||| tgTCCACATGGAGGACTCATGTTTACA Usp48; Kiaa4202 mmu-miR-30b 2277 2298 ucgaCUCACAUCCUACAAAUGU ||||| | ||||||||| gtagGAGTGAATCATGTTTACA Usp48; Kiaa4202 mmu-miR-30b 1165 1196 ucGACUC------ACAUCC----UACAAAUGU ||| | || ||| ||||||||| ttCTGTGTCCACATGGAGGACTCATGTTTACA Usp48; Kiaa4202 mmu-miR-30c 2266 2298 CGACUC--UCACAUCC--------UACAAAUGU || ||| || ||||| ||||||||| GCAGAGCAAGAGTAGGAGTGAATCATGTTTACA Usp48; Kiaa4202 mmu-miR-30d 1170 1196 gaAGGUCAGCC-CC----UACAAAUGU |||| :|| || ||||||||| tgTCCACATGGAGGACTCATGTTTACA Usp48; Kiaa4202 mmu-miR-30e 1172 1196 AGGU-CAGUUCC----UACAAAUGU |||| | :||| ||||||||| TCCACATGGAGGACTCATGTTTACA Usp48; Kiaa4202 mmu-miR-322 2276 2295 aCAACGUCGCGAAGUACAAA || | ||:| |||||||| aGTAGGAGTGAATCATGTTT Usp48; Kiaa4202 mmu-miR-335 642 664 uguaaaaagcaauAACGAGAACU | |||||||| agctggcgccagcTGGCTCTTGA Usp48; Kiaa4202 mmu-miR-337 274 296 UUUCCGUAGUAUAUCCUCGACUu |||||: | |: |||||||| AAAGGTTGCCTGCTGGAGCTGAg Usp48; Kiaa4202 mmu-miR-338 71 94 aguuGUUUUA-GUGACUACGACCu |:|||| ||: ||||||| ctccCGAAATGCATACATGCTGGt Usp48; Kiaa4202 mmu-miR-340 1546 1570 ccgauauuUCAUU--GACUCUGCCU ||||: |||||||||| tgaatgtgAGTAGTTCTGAGACGGA Usp48; Kiaa4202 mmu-miR-412 243 264 uGC--CGAUCACCUGGUCCACUUCa || || | || |||||||| gCGAAGCACGAGG---AGGTGAAGg Usp48; Kiaa4202 mmu-miR-412 932 955 ugccGAUC-ACCUGGUCCACUUCa |||| || |||||||| gataCTAGAACGAGAAGGTGAAGa Usp48; Kiaa4202 mmu-miR-424 899 922 aGGUUU--UGUACUUAACGACGAc ||||: ||| :| ||||||| cCCAAGTTACAGAGAGTGCTGCTc Usp48; Kiaa4202 mmu-miR-450b* 867 886 uACGUACGUUUUACAAGGGUUa |||| |||: | ||||||| cTGCA-GCAGTA-CTTCCCAAa Usp48; Kiaa4202 mmu-miR-470 464 486 AGUGGU--CACGGUCAGGUUCUu ||: :| | | :|||||||| TCGATATGGAGGAGGTCCAAGAc Usp48; Kiaa4202 mmu-miR-483 2262 2286 uGUUCUGCCC--UCCCCUCCUCACU ||:| | | || | |||||||| gCAGGCAGAGCAAGAGTAGGAGTGA Usp48; Kiaa4202 mmu-miR-483 172 194 uguucugcccucccCUCCUCACu |||||||| ataattccaaattcGAGGAGTGg Usp48; Kiaa4202 mmu-miR-497 899 922 auGUUUGGUG--UCACACGACGAc |||:::|| || |||||||| ccCAAGTTACAGAGAGTGCTGCTc Usp48; Kiaa4202 mmu-miR-546 1475 1489 cUGAGGCACGGUGGUA || || |||||||| tAC-CCAAGCCACCAT Usp48; Kiaa4202 mmu-miR-547 1618 1643 AGUGAGUUUC--UA----CAUGGUUC |:| |||||| || |||||||| TTAATCAAAGCAATGGAAGTACCAAG Usp48; Kiaa4202 mmu-miR-668 2012 2040 ccaucaccCGGCU--CGG---CUCACUGu ||:|| ||| ||||||| gactactcGCTGACTGCCAAGGAGTGACc Usp48; Kiaa4202 mmu-miR-674* 248 271 aacaagaCUCUAC--CCUCGACAc |||:|| |||||||| gcacgagGAGGTGAAGGAGCTGTa Usp48; Kiaa4202 mmu-miR-680 2311 2337 ggGGGUACAGUC------GUCUACGGG ||| ||||| ||||||||| agCCCTGGTCAGTCCACACAGATGCCC Usp48; Kiaa4202 mmu-miR-694 1781 1800 gaAGUCCGU-UGUAAAAGUC ||| ||| :||||||||| gaTCATGCACGCATTTTCAG Usp48; Kiaa4202 mmu-miR-701 431 451 aggUAGAUAAAGUCGCCGAUU ||| : | |||||||| aatATCGGAATATGCGGCTAA Usp48; Kiaa4202 mmu-miR-706 827 850 aaaaaacUCUGUC--CCAAAGAGa ||| :| |||||||| aaatgaaAGAAGGCTGGTTTCTCa Usp48; Kiaa4202 mmu-miR-712 242 266 ccauggCGGGC----CCACUUCCUC || || |||||||||| agcgaaGCACGAGGAGGTGAAGGAG Usp48; Kiaa4202 mmu-miR-718 1089 1109 gcugugggccggcCCGCCUUc ||||||| tttttagatgaatGGCGGAAa Usp48; Kiaa4202 mmu-miR-719 193 214 uuguaaaaagacAUCGGCUCUA |:|||||||| ggtgtgtagaaaTGGCCGAGAT Usp48; Kiaa4202 mmu-miR-721 2167 2187 aagggggaaaauUAACGUGAC ||||||||| caaataaagcagATTGCACTG Usp48; Kiaa4202 mmu-miR-761 268 289 ACACAG--UCAAAGUGGGACGACg ||| | || || ||||||| TGTACCAAAGGTT--GCCTGCTGg Usp48; Kiaa4202 mmu-miR-763 640 657 CGGUGACCAAGAAGGGUCGACC |: :|||| | |||||||| GTAGCTGG--C--GCCAGCTGG Usp48; Kiaa4202 mmu-miR-770-3p 1247 1268 ggucgaggugCAGUCCGGGUGc | | ||||||| aagagaaggaGGCTGGCCCACt Usp48; Kiaa4202 mmu-miR-804 45 69 aGGUCCACUCC---UUGUUGAGUGu ||| ||| || |: ||||||| cCCAAGTGTGGCAAAGGAACTCACt Usp48; Kiaa4202 mmu-miR-9 260 278 guaugUCGAUCUAUUGGUUUCu |||| :| ||||||| gaaggAGCT--GT-ACCAAAGg

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Usp48 RAID00044825 mmu-miR-5125 miRNA MIMAT0020635 Usp48 mRNA 170707 Prediction 0.1828 Usp48 RAID00067531 mmu-miR-152-3p miRNA MIMAT0000162 Usp48 mRNA 170707 CLIP-seq//Prediction 0.6559 Usp48 RAID00070058 mmu-miR-30c-5p miRNA MIMAT0000514 Usp48 mRNA 170707 Prediction 0.2202 Usp48 RAID00153225 mmu-miR-181d-5p miRNA MIMAT0004324 Usp48 mRNA 170707 Prediction 0.1828 Usp48 RAID00290228 mmu-miR-8100 miRNA MIMAT0031403 Usp48 mRNA 170707 Prediction 0.1828 Usp48 RAID00362136 mmu-miR-10a-5p miRNA MIMAT0000648 Usp48 mRNA 170707 Prediction 0.1828 Usp48 RAID00389468 mmu-miR-3966 miRNA MIMAT0019350 Usp48 mRNA 170707 Prediction 0.1828 Usp48 RAID00391644 mmu-miR-30b-5p miRNA MIMAT0000130 Usp48 mRNA 170707 Prediction 0.2202 Usp48 RAID00418202 mmu-miR-141-3p miRNA MIMAT0000153 Usp48 mRNA 170707 Prediction 0.1828 Usp48 RAID00445601 mmu-miR-96-5p miRNA MIMAT0000541 Usp48 mRNA 170707 Prediction 0.1828 Usp48 RAID00504076 mmu-miR-710 miRNA MIMAT0003500 Usp48 mRNA 170707 Prediction 0.1828 Usp48 RAID00533406 mmu-miR-7665-3p miRNA MIMAT0029837 Usp48 mRNA 170707 Prediction 0.1828 Usp48 RAID00644724 mmu-miR-133b-5p miRNA MIMAT0017083 Usp48 mRNA 170707 Prediction 0.1828 Usp48 RAID00717143 mmu-miR-30a-5p miRNA MIMAT0000128 Usp48 mRNA 170707 Prediction 0.2202 Usp48 RAID00732721 mmu-miR-129-5p miRNA MIMAT0000209 Usp48 mRNA 170707 Prediction 0.1828 Usp48 RAID00783786 mmu-miR-6540-5p miRNA MIMAT0025585 Usp48 mRNA 170707 Prediction 0.2202 Usp48 RAID00827477 mmu-miR-154-5p miRNA MIMAT0000164 Usp48 mRNA 170707 Prediction 0.2202 Usp48 RAID00877140 mmu-miR-128-3p miRNA MIMAT0000140 Usp48 mRNA 170707 Prediction 0.1828 Usp48 RAID00881304 mmu-miR-330-5p miRNA MIMAT0004642 Usp48 mRNA 170707 Prediction 0.1828 Usp48 RAID00903925 mmu-miR-29b-1-5p miRNA MIMAT0004523 Usp48 mRNA 170707 Prediction 0.1828 Usp48 RAID00979210 mmu-miR-1968-5p miRNA MIMAT0009441 Usp48 mRNA 170707 Prediction 0.1828 Usp48 RAID00980970 mmu-miR-653-5p miRNA MIMAT0004943 Usp48 mRNA 170707 Prediction 0.1828 Usp48 RAID01046621 mmu-miR-6896-3p miRNA MIMAT0027693 Usp48 mRNA 170707 Prediction 0.1828 Usp48 RAID01049321 mmu-miR-5134-5p miRNA MIMAT0020645 Usp48 mRNA 170707 Prediction 0.1828 Usp48 RAID01184993 mmu-miR-423-3p miRNA MIMAT0003454 Usp48 mRNA 170707 Prediction 0.1828 Usp48 RAID01262259 mmu-miR-302a-3p miRNA MIMAT0000380 Usp48 mRNA 170707 Prediction 0.1828 Usp48 RAID01275117 mmu-miR-10b-5p miRNA MIMAT0000208 Usp48 mRNA 170707 Prediction 0.1828 Usp48 RAID01296430 mmu-miR-873a-5p miRNA MIMAT0004936 Usp48 mRNA 170707 Prediction 0.1828 Usp48 RAID01314998 mmu-miR-27b-3p miRNA MIMAT0000126 Usp48 mRNA 170707 Prediction 0.1828 Usp48 RAID01318358 mmu-miR-34a-3p miRNA MIMAT0017022 Usp48 mRNA 170707 Prediction 0.1828 Usp48 RAID01439871 mmu-miR-31-5p miRNA MIMAT0000538 Usp48 mRNA 170707 CLIP-seq 0.5483 Usp48 RAID01520872 mmu-miR-325-3p miRNA MIMAT0004640 Usp48 mRNA 170707 Prediction 0.2202 Usp48 RAID01545102 mmu-miR-6948-3p miRNA MIMAT0027797 Usp48 mRNA 170707 Prediction 0.1828 Usp48 RAID01633358 mmu-miR-200a-3p miRNA MIMAT0000519 Usp48 mRNA 170707 Prediction 0.1828 Usp48 RAID01709963 mmu-miR-326-3p miRNA MIMAT0000559 Usp48 mRNA 170707 Prediction 0.1828 Usp48 RAID01768635 mmu-miR-183-5p miRNA MIMAT0000212 Usp48 mRNA 170707 Prediction 0.1828 Usp48 RAID01793732 mmu-miR-7b-5p miRNA MIMAT0000678 Usp48 mRNA 170707 Prediction 0.1828 Usp48 RAID01825723 mmu-miR-205-5p miRNA MIMAT0000238 Usp48 mRNA 170707 Prediction 0.1828 Usp48 RAID01832170 mmu-miR-22-3p miRNA MIMAT0000531 Usp48 mRNA 170707 Prediction 0.1828 Usp48 RAID01832282 mmu-miR-361-5p miRNA MIMAT0000704 Usp48 mRNA 170707 Prediction 0.1828 Usp48 RAID01840318 mmu-miR-6987-5p miRNA MIMAT0027876 Usp48 mRNA 170707 Prediction 0.1828 Usp48 RAID01952866 mmu-miR-130a-3p miRNA MIMAT0000141 Usp48 mRNA 170707 CLIP-seq//Prediction 0.6478 Usp48 RAID01971082 mmu-miR-876-5p miRNA MIMAT0004854 Usp48 mRNA 170707 CLIP-seq//Prediction 0.6478 Usp48 RAID01975006 mmu-miR-302b-3p miRNA MIMAT0003374 Usp48 mRNA 170707 Prediction 0.1828 Usp48 RAID02007829 mmu-miR-30d-5p miRNA MIMAT0000515 Usp48 mRNA 170707 Prediction 0.2202 Usp48 RAID02140412 mmu-miR-3474 miRNA MIMAT0015646 Usp48 mRNA 170707 Prediction 0.1828 Usp48 RAID02233304 mmu-miR-148a-3p miRNA MIMAT0000516 Usp48 mRNA 170707 CLIP-seq//Prediction 0.6478 Usp48 RAID02236032 mmu-miR-721 miRNA MIMAT0003515 Usp48 mRNA 170707 CLIP-seq//Prediction 0.6559 Usp48 RAID02243626 mmu-miR-6945-5p miRNA MIMAT0027790 Usp48 mRNA 170707 Prediction 0.1828 Usp48 RAID02375971 mmu-miR-30e-5p miRNA MIMAT0000248 Usp48 mRNA 170707 Prediction 0.2202 Usp48 RAID02388649 mmu-miR-147-5p miRNA MIMAT0017269 Usp48 mRNA 170707 Prediction 0.1828 Usp48 RAID02419234 mmu-miR-212-5p miRNA MIMAT0017053 Usp48 mRNA 170707 Prediction 0.1828 Usp48 RAID02595055 mmu-miR-344d-2-5p miRNA MIMAT0014961 Usp48 mRNA 170707 Prediction 0.1828 Usp48 RAID02707035 mmu-miR-488-3p miRNA MIMAT0003450 Usp48 mRNA 170707 Prediction 0.2202 Usp48 RAID02761116 mmu-miR-155-5p miRNA MIMAT0000165 Usp48 mRNA 170707 Prediction 0.1828 Usp48 RAID02816337 mmu-miR-27a-3p miRNA MIMAT0000537 Usp48 mRNA 170707 Prediction 0.1828 Usp48 RAID02817893 mmu-miR-5624-3p miRNA MIMAT0022378 Usp48 mRNA 170707 Prediction 0.1828 Usp48 RAID02822867 mmu-miR-204-3p miRNA MIMAT0017002 Usp48 mRNA 170707 Prediction 0.1828 Usp48 RAID02886693 mmu-miR-7658-3p miRNA MIMAT0029823 Usp48 mRNA 170707 Prediction 0.1828 Usp48 RAID02896499 mmu-miR-124-3p miRNA MIMAT0000134 Usp48 mRNA 170707 CLIP-seq//Prediction 0.6478 Usp48 RAID02935153 mmu-miR-3069-5p miRNA MIMAT0014844 Usp48 mRNA 170707 Prediction 0.1828 Usp48 RAID02962148 mmu-miR-216c-3p miRNA MIMAT0029889 Usp48 mRNA 170707 Prediction 0.1828 Usp48 RAID03110752 mmu-miR-218-5p miRNA MIMAT0000663 Usp48 mRNA 170707 Prediction 0.1828 Usp48 RAID03122901 mmu-miR-7117-3p miRNA MIMAT0028132 Usp48 mRNA 170707 Prediction 0.1828 Usp48 RAID03304572 mmu-miR-5623-5p miRNA MIMAT0022373 Usp48 mRNA 170707 Prediction 0.1828 Usp48 RAID03332194 mmu-miR-7004-5p miRNA MIMAT0027912 Usp48 mRNA 170707 Prediction 0.1828 Usp48 RAID03334085 mmu-miR-6381 miRNA MIMAT0025127 Usp48 mRNA 170707 Prediction 0.1828 Usp48 RAID03337638 mmu-miR-149-5p miRNA MIMAT0000159 Usp48 mRNA 170707 NGS (Next Generation Sequencing) 0.5483 Usp48 RAID03495300 mmu-miR-26b-5p miRNA MIMAT0000534 Usp48 mRNA 170707 Prediction 0.1828 Usp48 RAID03508544 mmu-miR-186-5p miRNA MIMAT0000215 Usp48 mRNA 170707 Prediction 0.2202 Usp48 RAID03551484 mmu-miR-206-5p miRNA MIMAT0017004 Usp48 mRNA 170707 Prediction 0.1828 Usp48 RAID03555437 mmu-miR-1953 miRNA MIMAT0009424 Usp48 mRNA 170707 Prediction 0.1828 Usp48 RAID03582768 mmu-miR-365-3p miRNA MIMAT0000711 Usp48 mRNA 170707 Prediction 0.2381 Usp48 RAID03634211 mmu-miR-384-5p miRNA MIMAT0004745 Usp48 mRNA 170707 Prediction 0.2381 Usp48 RAID03639590 mmu-miR-148b-3p miRNA MIMAT0000580 Usp48 mRNA 170707 CLIP-seq//Prediction 0.6478 Usp48 RAID03670067 mmu-miR-494-3p miRNA MIMAT0003182 Usp48 mRNA 170707 Prediction 0.2381 Usp48 RAID03715574 mmu-mir-325 miRNA MI0000597 Usp48 mRNA 170707 Prediction 0.1828 Usp48 RAID03777075 mmu-miR-383-5p miRNA MIMAT0000748 Usp48 mRNA 170707 Prediction 0.1828 Usp48 RAID03796017 mmu-miR-708-5p miRNA MIMAT0004828 Usp48 mRNA 170707 Prediction 0.1828 Usp48 RAID03841373 mmu-miR-143-3p miRNA MIMAT0000247 Usp48 mRNA 170707 Prediction 0.1828 Usp48 RAID03842244 mmu-miR-301b-3p miRNA MIMAT0004186 Usp48 mRNA 170707 CLIP-seq//Prediction 0.6478 Usp48 RAID03903452 mmu-miR-182-5p miRNA MIMAT0000211 Usp48 mRNA 170707 Prediction 0.1828 Usp48 RAID03920495 mmu-miR-301a-3p miRNA MIMAT0000379 Usp48 mRNA 170707 CLIP-seq//Prediction 0.6478 Usp48 RAID03920968 mmu-miR-299a-3p miRNA MIMAT0004577 Usp48 mRNA 170707 Prediction 0.1828 Usp48 RAID03924702 mmu-miR-7a-5p miRNA MIMAT0000677 Usp48 mRNA 170707 Prediction 0.1828 Usp48 RAID04019029 mmu-miR-712-5p miRNA MIMAT0003502 Usp48 mRNA 170707 Prediction 0.1828 Usp48 RAID04023985 mmu-miR-130b-3p miRNA MIMAT0000387 Usp48 mRNA 170707 CLIP-seq//Prediction 0.6478 Usp48 RAID04042172 mmu-miR-421-3p miRNA MIMAT0004869 Usp48 mRNA 170707 Prediction 0.1828