DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000152 mmu-miR-140* 272359 Irf2bp1 ggcACCAAGAUGG-GAC-ACCAu ||| |:| |: ||| |||| gcuUGGCUUUCCUGCUGUUGGUa 2 19 233 255 [mm9:7:19591773-19591795:+] 0.6741 121 0 -16.94 -0.7699 MIMAT0004535 mmu-miR-150* 272359 Irf2bp1 gauaGGGGGUCCGGACAUGGUc | |||| ||||||||| accgCACCCAACCCUGUACCAc 2 19 69 90 [mm9:7:19591609-19591630:+] 0.6204 166 7 -24.63 -0.2843 MIMAT0000376 mmu-miR-298 272359 Irf2bp1 cccuucuUGUCGG-GAGGAGACGg |:| || :|||||||| uauguauAUACCCUUUCCUCUGCc 2 17 98 121 [mm9:7:19591638-19591661:+] 0.6204 155 7 -23.84 -0.7002 MIMAT0004616 mmu-miR-30c-1* 272359 Irf2bp1 ccucauuuguuGGGAGAGGGUc |||||||||| uuuauuguuccCCCUCUCCCAc 2 12 334 355 [mm9:7:19591874-19591895:+] 0.5592 155 7 -21.11 -0.2368 MIMAT0005438 mmu-miR-30c-2* 272359 Irf2bp1 ucucauuugucGGAAGAGGGUc || ||||||| uuuauuguuccCCCUCUCCCAc 2 12 334 355 [mm9:7:19591874-19591895:+] 0.5592 147 7 -14.37 -0.2368 MIMAT0004621 mmu-let-7b* 272359 Irf2bp1 ccCUUCCGUCAUCCAACAU-AUc | :||| | | ||||| || caGUGGGCUGCUGUUUGUAGUAg 2 21 512 534 [mm9:7:19592052-19592074:+] 0.5474 120 0 -14.33 -0.3297 MIMAT0004628 mmu-miR-21* 272359 Irf2bp1 cuguCGGGU-AGCUGACGACAAc |:||| | |:|||||||| uuuuGUCCAGUGGGCUGCUGUUu 2 19 505 527 [mm9:7:19592045-19592067:+] 0.5474 165 7 -22.95 -0.1133 MIMAT0004628 mmu-miR-21* 272359 Irf2bp1 cuGUCGGGU--AGCUGACGACAAc ::||::: |: |||||||| cuUGGCUUGGCUUUCCUGCUGUUg 2 21 229 252 [mm9:7:19591769-19591792:+] 0.6741 147 7 -19.64 -0.2411 MIMAT0004640 mmu-miR-325 272359 Irf2bp1 aacuauccuccacGAGUUAUUu :||||||| acccuuuuccuccUUCAAUAAa 2 10 354 375 [mm9:7:19591894-19591915:+] 0.5592 141 7 -7.05 -0.8910 MIMAT0001421 mmu-miR-434-5p 272359 Irf2bp1 accAAGUUUGGUACUCAGCUCg || ||: ::| ||||||| uaaUUAAAGGUGU-AGUCGAG- 2 20 553 572 [mm9:7:19592093-19592112:+] 0.5240 153 7 -14.30 -0.1819 MIMAT0002107 mmu-miR-466a-3p 272359 Irf2bp1 agaauacacacgcacAUACAUAu ||||||| uguaccacccuaaccUAUGUAUa 2 9 83 105 [mm9:7:19591623-19591645:+] 0.6204 140 7 -6.37 -0.7561 MIMAT0002108 mmu-miR-467a-1* 272359 Irf2bp1 cacauccacacacAUACAUAUa |||||||| uaccacccuaaccUAUGUAUAu 2 10 85 106 [mm9:7:19591625-19591646:+] 0.6204 145 7 -7.28 -0.7595 MIMAT0003725 mmu-miR-675-5p 272359 Irf2bp1 ugacacccGGGAAAGGCGUGGu :|| | ||||||| uaaauuauUCCCUACCGCACCc 2 15 56 77 [mm9:7:19591596-19591617:+] 0.6204 150 7 -21.27 -0.8223 MIMAT0004822 mmu-miR-770-5p 272359 Irf2bp1 gcAC-CGGGUCUGUGCACCACGa || | ||| :| ||||||| guUGUGACCA-CUAGGUGGUGCc 2 21 483 504 [mm9:7:19592023-19592044:+] 0.6131 149 7 -21.82 -0.3585 MIMAT0004825 mmu-miR-423-5p 272359 Irf2bp1 uuucagagCGA-GAGACGGGGAGu |:| || ||||||| uguuugggGUUCCUGGGCCCCUCc 2 16 191 214 [mm9:7:19591731-19591754:+] 0.6741 146 7 -20.85 -0.5149 MIMAT0003464 mmu-miR-686 272359 Irf2bp1 agaaguggcagaccCUUCGUUa ||||||| cgcucuuuauaaacGAAGCAAa 2 9 307 328 [mm9:7:19591847-19591868:+] 0.6427 140 7 -11.68 -1.1442 MIMAT0003472 mmu-miR-693-5p 272359 Irf2bp1 cuuuugaaagccuACACCGAc ||||||| gggggagagagcuUGUGGCUc 2 9 157 177 [mm9:7:19591697-19591717:+] 0.6741 140 7 -15.87 -0.2258 MIMAT0003478 mmu-miR-467b* 272359 Irf2bp1 cacaaccacacacAUACAUAUa |||||||| uaccacccuaaccUAUGUAUAu 2 10 85 106 [mm9:7:19591625-19591646:+] 0.6204 145 7 -7.28 -0.7595 MIMAT0004827 mmu-miR-297b-3p 272359 Irf2bp1 auacccauacacacAUACAUAu ||||||| guaccacccuaaccUAUGUAUa 2 9 84 105 [mm9:7:19591624-19591645:+] 0.6204 140 7 -6.37 -0.7561 MIMAT0003490 mmu-miR-700 272359 Irf2bp1 ccaccugagCCA-AGGGCGCAc ||| ||||||| ugggugagaGGUACCCCGCGUg 2 13 258 279 [mm9:7:19591798-19591819:+] 0.6584 143 7 -28.87 -0.4144 MIMAT0003495 mmu-miR-705 272359 Irf2bp1 acggguGGGGUGGAGGGUGg |||| :||||||| auuguuCCCCCUCUCCCACc 2 15 337 356 [mm9:7:19591877-19591896:+] 0.5592 158 7 -33.15 -0.5765 MIMAT0004237 mmu-miR-742 272359 Irf2bp1 aaAUGGGUCGUACC--ACCGAAAg | ||: | ||| ||||||| uuUUCCUUUCUUGGCUUGGCUUUc 2 21 220 243 [mm9:7:19591760-19591783:+] 0.6741 151 7 -18.60 -0.4559 MIMAT0004863 mmu-miR-220 272359 Irf2bp1 uucacagacUGUGACA-CCACc |||:||| |||| gggguagauACAUUGUGGGUGg 2 13 136 157 [mm9:7:19591676-19591697:+] 0.6741 120 0 -20.00 -0.4418 MIMAT0004864 mmu-miR-297a* 272359 Irf2bp1 auacccauacacacAUACAUAu ||||||| guaccacccuaaccUAUGUAUa 2 9 84 105 [mm9:7:19591624-19591645:+] 0.6204 140 7 -6.37 -0.7561 MIMAT0004866 mmu-miR-297c* 272359 Irf2bp1 auacccauacacacAUACAUAu ||||||| guaccacccuaaccUAUGUAUa 2 9 84 105 [mm9:7:19591624-19591645:+] 0.6204 140 7 -6.37 -0.7561 MIMAT0004876 mmu-miR-466b-3p 272359 Irf2bp1 agaauacacacgcacAUACAUAu ||||||| uguaccacccuaaccUAUGUAUa 2 9 83 105 [mm9:7:19591623-19591645:+] 0.6204 140 7 -6.37 -0.7561 MIMAT0005453 mmu-miR-466b-3-3p 272359 Irf2bp1 agaauacacacgcacAUACAUAa ||||||| uguaccacccuaaccUAUGUAUa 2 9 83 105 [mm9:7:19591623-19591645:+] 0.6204 140 7 -4.11 -0.7561 MIMAT0004878 mmu-miR-466c-3p 272359 Irf2bp1 agaauacacacgcacAUACAUAu ||||||| uguaccacccuaaccUAUGUAUa 2 9 83 105 [mm9:7:19591623-19591645:+] 0.6204 140 7 -6.37 -0.7561 MIMAT0004880 mmu-miR-466e-3p 272359 Irf2bp1 agaauacacacgcacAUACAUAu ||||||| uguaccacccuaaccUAUGUAUa 2 9 83 105 [mm9:7:19591623-19591645:+] 0.6204 140 7 -6.37 -0.7561 MIMAT0004887 mmu-miR-467d* 272359 Irf2bp1 cacauccacacacAUACAUAUa |||||||| uaccacccuaaccUAUGUAUAu 2 10 85 106 [mm9:7:19591625-19591646:+] 0.6204 145 7 -7.28 -0.7595 MIMAT0004931 mmu-miR-466d-3p 272359 Irf2bp1 gauacacacgcacAUACAUAu ||||||| uaccacccuaaccUAUGUAUa 2 9 85 105 [mm9:7:19591625-19591645:+] 0.6204 140 7 -6.37 -0.7561 MIMAT0004862 mmu-miR-877* 272359 Irf2bp1 acccuccucccucUUCUCCUGu |||||||| uuguccugcgcgcAAGAGGACu 2 10 456 477 [mm9:7:19591996-19592017:+] 0.6131 145 7 -11.97 -0.2882 MIMAT0005294 mmu-miR-467e* 272359 Irf2bp1 uauauccacacacAUACAUAUa |||||||| uaccacccuaaccUAUGUAUAu 2 10 85 106 [mm9:7:19591625-19591646:+] 0.6204 145 7 -7.28 -0.7595 MIMAT0005834 mmu-miR-466i 272359 Irf2bp1 aucAC-ACAUACACACA-CACAUa || ||| ||| || ||||| ggcUGCUGUUUGU-AGUAGUGUAc 2 20 517 539 [mm9:7:19592057-19592079:+] 0.5474 120 0 -9.71 -0.4171 MIMAT0005839 mmu-miR-669f 272359 Irf2bp1 uaugcacacacacAUACAUAUAc ||||||||| uaccacccuaaccUAUGUAUAUa 2 11 85 107 [mm9:7:19591625-19591647:+] 0.6204 150 7 -6.59 -0.9985 MIMAT0005854 mmu-miR-467g 272359 Irf2bp1 uauauacacacacAUACAUAu ||||||| uaccacccuaaccUAUGUAUa 2 9 85 105 [mm9:7:19591625-19591645:+] 0.6204 140 7 -6.37 -0.7561 MIMAT0005858 mmu-miR-1197 272359 Irf2bp1 ucUUCAUCUGGUACACAGGAu |:||| ||: ||||||| agAGGUACCCCGCGUGUCCUu 2 20 264 284 [mm9:7:19591804-19591824:+] 0.6584 163 7 -25.30 -0.1727 MIMAT0007877 mmu-miR-1894-5p 272359 Irf2bp1 ucucCGUCCACCAUCCCCUCUc |::||||| ||||||| cauuGUGGGUGG--GGGGAGAg 2 19 146 165 [mm9:7:19591686-19591705:+] 0.6741 159 7 -29.27 -0.2188 MIMAT0007877 mmu-miR-1894-5p 272359 Irf2bp1 ucucCGUCCACCAUCCC-CUCUc |: ||| || ||| |||| ugcuGUUGGUAGUUGGGUGAGAg 2 19 245 267 [mm9:7:19591785-19591807:+] 0.6741 126 0 -21.58 -0.2219 MIMAT0007878 mmu-miR-1894-3p 272359 Irf2bp1 gaGGGAAGUGGGAGAGGGAAcg ||||| |:: :|||||| ccCCCUU--CUUGUUCCCUUua 3 21 399 418 [mm9:7:19591939-19591958:+] 0.6083 137 0 -20.52 -0.1131 MIMAT0009399 mmu-miR-1935 272359 Irf2bp1 ucUCUAGGCGGUCGGAGACGGa | || | |: |||||||| guAUAUACCCUUUCCUCUGCCc 2 21 101 122 [mm9:7:19591641-19591662:+] 0.6204 156 7 -21.29 -0.5415 MIMAT0009402 mmu-miR-1938 272359 Irf2bp1 cuggcuugauguucAGGGUGGc ||||||| uauuguucccccucUCCCACCc 2 9 336 357 [mm9:7:19591876-19591897:+] 0.5592 140 7 -14.56 -0.5093 MIMAT0009415 mmu-miR-1948 272359 Irf2bp1 gaCAUGCUCACGAGACG-GAUUu |||| |||| ||| |||| guGUACAUUUGCUGUGCUCUAAu 2 21 534 556 [mm9:7:19592074-19592096:+] 0.4817 132 0 -18.75 -0.8063 MIMAT0009419 mmu-miR-669m 272359 Irf2bp1 uauacaaacacaccUACAUAUa ||||||| uaccacccuaaccuAUGUAUAu 2 9 85 106 [mm9:7:19591625-19591646:+] 0.6204 140 7 -6.28 -0.7595 MIMAT0009431 mmu-miR-1958 272359 Irf2bp1 ugAAUGACGAAGGUGAAAGGAu || :|| |: :||||||| cuUUCUUGGCUUGGCUUUCCUg 2 21 225 246 [mm9:7:19591765-19591786:+] 0.6741 156 7 -17.14 -0.2865 MIMAT0009431 mmu-miR-1958 272359 Irf2bp1 ugaAUG-ACGAAGGUGAAAGGAu ||: | : | | ||||||| accUAUGUAUAUACCCUUUCCUc 2 20 95 117 [mm9:7:19591635-19591657:+] 0.6204 146 7 -12.63 -0.4074 MIMAT0009446 mmu-miR-1971 272359 Irf2bp1 agagucgggucGGAAAUg |||||| ccuucuuguucCCUUUAg 2 8 402 419 [mm9:7:19591942-19591959:+] 0.6083 120 6 -10.18 -0.1318 MIMAT0009458 mmu-miR-1981 272359 Irf2bp1 cggugcagauucgggucGGAAAUg |||||| uuucccccuucuuguucCCUUUAg 2 8 396 419 [mm9:7:19591936-19591959:+] 0.6083 120 6 -12.53 -0.1331 MIMAT0009460 mmu-miR-1982.1 272359 Irf2bp1 gacACCCUCUUGUAUCCCACUCu || :| | :| ||||||| ugcUGUUGGUA-GUUGGGUGAGa 2 21 245 266 [mm9:7:19591785-19591806:+] 0.6741 146 7 -24.45 -0.6609 MIMAT0011214 mmu-miR-2138 272359 Irf2bp1 uaAGGCGGUUCGGGCAAGGGAa |:| || |::||||||| uuUUCCCCCUUCUUGUUCCCUu 2 21 395 416 [mm9:7:19591935-19591956:+] 0.6083 156 7 -24.40 -1.1739 MIMAT0014852 mmu-miR-3072* 272359 Irf2bp1 ggACGGGAGGGAGC--CCCAGGGa | |:|| || | ||||||| uuUCCUCUGCCCAGAUGGGUCCCc 2 21 111 134 [mm9:7:19591651-19591674:+] 0.6472 151 7 -26.90 -0.4017 MIMAT0000134 mmu-miR-124 272359 Irf2bp1 ccGUAAGUGGCGCACGGAAu || | : :| ||||||| acCACUAGGUG-GUGCCUUu 2 19 489 507 [mm9:7:19592029-19592047:+] 0.6131 144 7 -14.02 -0.4089 MIMAT0000134 mmu-miR-124 272359 Irf2bp1 ccgUAAGUGGCGCAC-GGAAu :| | ||||||| |||| gagGUACCCCGCGUGUCCUUg 2 18 265 285 [mm9:7:19591805-19591825:+] 0.6584 129 0 -25.27 -0.2357 MIMAT0004576 mmu-miR-296-3p 272359 Irf2bp1 ccucucggagGUGGGUUGGGAg ||||||||||| uucccuaccgCACCCAACCCUg 2 13 63 84 [mm9:7:19591603-19591624:+] 0.6204 160 7 -26.40 -0.6257 MIMAT0000381 mmu-miR-34c 272359 Irf2bp1 cguuagucgauUGAU-GUGACGGa :||: ||||||| -----------GCUGCCACUGCCa 2 13 1 13 [mm9:7:19591541-19591553:+] 0.6213 143 7 -14.55 -0.4600 MIMAT0000382 mmu-miR-34b-5p 272359 Irf2bp1 uguuagucgauuaauGUGACGGa ||||||| ----------gcugcCACUGCCa 2 9 1 13 [mm9:7:19591541-19591553:+] 0.6213 140 7 -14.00 -0.4600 MIMAT0000542 mmu-miR-34a 272359 Irf2bp1 uguugguCGAUUCUGUGACGGu ||| | ||||||| -------GCU--GCCACUGCCa 2 16 1 13 [mm9:7:19591541-19591553:+] 0.6213 144 7 -17.15 -0.4633 MIMAT0000546 mmu-miR-103 272359 Irf2bp1 aguAUC-GGGACAUGUUACGACGa ||| :::| |: :||||||| cuuUAGUUUUUAUGAGAUGCUGCg 2 21 414 437 [mm9:7:19591954-19591977:+] 0.6107 155 7 -15.16 -0.2663 MIMAT0004651 mmu-miR-340-5p 272359 Irf2bp1 uuagucaGAGUAACGAAAUAUu |||: | ||||||| cugagaaCUCGCU-CUUUAUAa 2 16 298 318 [mm9:7:19591838-19591858:+] 0.6427 149 7 -12.06 -0.9450 MIMAT0000647 mmu-miR-107 272359 Irf2bp1 acuAUC-GGGACAUGUUACGACGa ||| :::| |: :||||||| cuuUAGUUUUUAUGAGAUGCUGCg 2 21 414 437 [mm9:7:19591954-19591977:+] 0.6107 155 7 -15.16 -0.2663 MIMAT0000661 mmu-miR-214 272359 Irf2bp1 ugaCGGACAGACACGGACGACa ||:|| || | ||||||| uugGCUUGGCU-UUCCUGCUGu 2 20 230 250 [mm9:7:19591770-19591790:+] 0.6741 161 7 -22.67 -0.9460 MIMAT0001542 mmu-miR-449a 272359 Irf2bp1 uggucgauuguuauGUGACGGu ||||||| ---------gcugcCACUGCCa 2 9 1 13 [mm9:7:19591541-19591553:+] 0.6213 140 7 -15.22 -0.4633 MIMAT0003112 mmu-miR-489 272359 Irf2bp1 cgACGGUAUAUA-CACCACA-GUAa |||::| |:| || |||| ||| gcUGCUGUUUGUAGUAGUGUACAUu 2 22 518 542 [mm9:7:19592058-19592082:+] 0.5474 132 0 -18.77 -0.2446 MIMAT0003183 mmu-miR-376c 272359 Irf2bp1 ugcacuuuaaaggaGAUACAa |||||| uguaccacccuaacCUAUGUa 2 8 83 103 [mm9:7:19591623-19591643:+] 0.6204 120 6 -7.78 -0.1289 MIMAT0003893 mmu-miR-761 272359 Irf2bp1 acacAGUCAAAGUGGGACGACg |::| || :||||||| uggcUUGGCUU--UCCUGCUGu 2 19 231 250 [mm9:7:19591771-19591790:+] 0.6741 147 7 -15.10 -0.9523 MIMAT0003460 mmu-miR-449c 272359 Irf2bp1 ggucgaucguuAC-GUGACGGa || ||||||| ---------gcUGCCACUGCCa 2 11 1 13 [mm9:7:19591541-19591553:+] 0.6213 141 7 -13.82 -0.4633 MIMAT0005447 mmu-miR-449b 272359 Irf2bp1 cggucgauuguuGUGACGGa ||||||| -------gcugcCACUGCCa 2 9 1 13 [mm9:7:19591541-19591553:+] 0.6213 140 7 -14.00 -0.4600

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G071413 Irf2bp1 Mus musculus 272359

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Irf2bp1 mmu-miR-877star beg:464 end:477 pic:3' ACCCTCCTCCCTC-TTCTCCTGT 5'& | |||||||| &5' ------------GCAAGAGGAC- 3' Irf2bp1 mmu-miR-103 beg:426 end:437 pic:3' AGTATCGGGACATGTTACGACGA 5'& .||||||| &5' --------------GATGCTGC- 3' Irf2bp1 mmu-miR-107 beg:426 end:437 pic:3' ACTATCGGGACATGTTACGACGA 5'& .||||||| &5' --------------GATGCTGC- 3' Irf2bp1 mmu-miR-296-3p beg:67 end:84 pic:3' CCTCTCGGAGGTGGGTTGGGAG 5'& || ||||||||||| &5' ------CCG-CACCCAACCCT- 3' Irf2bp1 mmu-miR-34b-5p beg:0 end:13 pic:3' TGTTAGTCGATTAATGTGACGGA 5'& |||. ||||||| &5' -------GCTGC---CACTGCC- 3' Irf2bp1 mmu-miR-34c beg:0 end:13 pic:3' CGTTAGTCGATTGAT-GTGACGGA 5'& .||. ||||||| &5' -----------GCTGCCACTGCC- 3' Irf2bp1 mmu-miR-449b beg:0 end:13 pic:3' CGGTCGATTGTTGTGACGGA 5'& |||. ||||||| &5' ----GCTGC---CACTGCC- 3' Irf2bp1 mmu-miR-449c beg:0 end:13 pic:3' GGTCGATCGTTACGTGACGGA 5'& ||| || ||||||| &5' ---GCT-GC----CACTGCC- 3' Irf2bp1 mmu-miR-34a beg:0 end:14 pic:3' TGTTGGTCGATTCTGTGACGGT 5'& |||. |||||||| &5' -------GCTGC--CACTGCCA 3' Irf2bp1 mmu-miR-449a beg:0 end:14 pic:3' TGGTCGATTGTTATGTGACGGT 5'& ||| .| |||||||| &5' ----GCT-GC----CACTGCCA 3' Irf2bp1 mmu-miR-700 beg:264 end:279 pic:3' CCACCTGAGCCAA-GGGCGCAC 5'& ||| |||||||| &5' ---------GGTACCCCGCGTG 3' Irf2bp1 mmu-miR-675-5p beg:62 end:77 pic:3' TGACACCCGGGAAAGGCGTGGT 5'& |||| ||||||| &5' --------CCCTA-CCGCACC- 3' Irf2bp1 mmu-miR-298 beg:105 end:122 pic:3' CCCTTCTTGTCGGG--AGGAGACGG 5'& ||| ||||||||| &5' -----------CCCTTTCCTCTGCC 3' Irf2bp1 mmu-miR-1935 beg:105 end:122 pic:3' TCTCTAGGCGGTCGGAGACGGA 5'& || |. |||||||| &5' ------CC-CTTTCCTCTGCC- 3' Irf2bp1 mmu-miR-1953 beg:7 end:26 pic:3' GTCTTCGGACTCTTGAAAGGGT 5'& ||| |. ||||||| &5' -----GCCAGGCTTCTTTCCC- 3' Irf2bp1 mmu-miR-1958 beg:105 end:117 pic:3' TGAATGACGAAGGTGAAAGGAT 5'& || ||||||| &5' -----------CC-CTTTCCT- 3' Irf2bp1 mmu-miR-1958 beg:230 end:247 pic:3' TGAATGACGAAGGTGAAAGGAT 5'& || |. .|||||||. &5' -------GC-TTGGCTTTCCTG 3' Irf2bp1 mmu-miR-423-5p beg:196 end:214 pic:3' TTTCAGAGCGAGAGA-CGGGGAGT 5'& |.|| ||||||| &5' --------GTTCCTGGGCCCCTC- 3' Irf2bp1 mmu-miR-1894-5p beg:147 end:166 pic:3' TCTCCGTCCACCATCCCCTCTC 5'& | ||||| |||||||| &5' ----GTGGGTGG--GGGGAGAG 3' Irf2bp1 mmu-miR-770-5p beg:487 end:504 pic:3' GCACCGGGTCTGTGCACCACGA 5'& ||| .| ||||||| &5' ------CCAC-TAGGTGGTGC- 3' Irf2bp1 mmu-miR-2138 beg:397 end:417 pic:3' TAAGGCGGTTCGGGCAAGGGAA 5'& ||| || |..|||||||| &5' --TCCCCCTT-CTTGTTCCCTT 3' Irf2bp1 mcmv-miR-m108-1 beg:170 end:188 pic:3' GCTGTGCTCGGTGGCAGTCTTT 5'& .|| |.||||||.| &5' -------GGCTCCTGTCAGAGA 3' Irf2bp1 mmu-miR-106a beg:321 end:337 pic:3' GATGGACGTGACAATCGTGAAAC 5'& ||| ||||.||| &5' ------GCAAA---AGCATTTT- 3' Irf2bp1 mmu-miR-106b beg:321 end:338 pic:3' TAGACGTGACAGTCGTGAAAT 5'& ||| ||||.|||| &5' ----GCAAA---AGCATTTTA 3' Irf2bp1 mmu-miR-1197 beg:261 end:284 pic:3' TCTTCATCTGGTACACAGGAT 5'& |||.||| ||. ||||||| &5' AGAGGTACCCCGCGTGTCCT- 3' Irf2bp1 mmu-miR-125bstar beg:220 end:238 pic:3' TCCAGGGTTCTTGGACTGAACA 5'& |||. |.||.|||| &5' ---TCCTTT---CTTGGCTTG- 3' Irf2bp1 mmu-miR-130bstar beg:147 end:168 pic:3' TCATCACGTTGTCCCTTTCTCA 5'& ||.| | . .||||.|||| &5' -GTGG-GTGG-GGGGAGAGAG- 3' Irf2bp1 mmu-miR-146a beg:409 end:426 pic:3' TTGGGTACCTTAAGTCAAGAGT 5'& ||| ||.||||.|.| &5' --CCC------TTTAGTTTTTA 3' Irf2bp1 mmu-miR-150star beg:72 end:90 pic:3' GATAGGGGGTCCGGACATGGTC 5'& |||| ||||||||| &5' ------CCCAACCCTGTACCA- 3' Irf2bp1 mmu-miR-16 beg:506 end:527 pic:3' GC-GGTTATAAATGCACGACGAT 5'& | |||.|. .| |||||.| &5' -GTCCAGTGG--GC-TGCTGTT- 3' Irf2bp1 mmu-miR-17 beg:321 end:337 pic:3' GATGGACGTGACATTCGTGAAAC 5'& ||| |||||.||| &5' ------GCAA---AAGCATTTT- 3' Irf2bp1 mmu-miR-1892 beg:395 end:415 pic:3' TAGGAGGGAGGGCAGGGGTTTA 5'& ||| ||.||..||.||| &5' -TCCCCCTTCTTGTTCCC---- 3' Irf2bp1 mmu-miR-1894-3p beg:13 end:35 pic:3' GAGGGAAGTGGGAGAGGGAACG 5'& ||.|.||| ||||| ||||| &5' CTTCTTTC-CCCTCCCCCTT-- 3' Irf2bp1 mmu-miR-1897-5p beg:349 end:372 pic:3' GG-GGGAGAAAGAGGTAGGTTTC 5'& || ||||.|| |||| |.||| &5' CCACCCTTTTCCTCC-TTCAA-- 3' Irf2bp1 mmu-miR-1906 beg:506 end:526 pic:3' TCGGGACGGAGTCCGACGACGT 5'& |.|| |. .||||||||. &5' -GTCCAGT---GGGCTGCTGT- 3' Irf2bp1 mmu-miR-1907 beg:505 end:528 pic:3' TGGAGGTCTAGGAGACGACGAG 5'& . ||||| ||||||.|. &5' -TGTCCAGTGGG-CTGCTGTTT 3' Irf2bp1 mmu-miR-1938 beg:347 end:357 pic:3' CTGGCTTGATGTTCAGGGTGGC 5'& ||||||| &5' --------------TCCCACC- 3' Irf2bp1 mmu-miR-1940 beg:349 end:371 pic:3' TTGACGAGGT-GGAAGAGTCAGGAGGTA 5'& ||| ||||.|| ||||.|| &5' -------CCACCCTTTTCC-TCCTTCA- 3' Irf2bp1 mmu-miR-195 beg:230 end:253 pic:3' CGGTTATAAAGACACGACGAT 5'& ||. |||| |||||.|. &5' GCTTGGCTTTCC-TGCTGTTG 3' Irf2bp1 mmu-miR-1957 beg:0 end:11 pic:3' CAGTATACGAGATGGTGAC 5'& ||.|||||| &5' ----------CTGCCACTG 3' Irf2bp1 mmu-miR-1958 beg:208 end:227 pic:3' TGAATGACGAAGGTGAAAGGAT 5'& || |||.| .|||||| &5' -----CTCCTTTCTTTTTCCT- 3' Irf2bp1 mmu-miR-1982.1 beg:244 end:267 pic:3' GACACCC-TCTTGTATCCCACTCT 5'& |||| || || |||||||| &5' CTGTTGGTAGTT----GGGTGAGA 3' Irf2bp1 mmu-miR-1982star beg:338 end:355 pic:3' GGAGGGGTCCTGGGAGGGTT 5'& .||||| |.|||||| &5' -TTCCCC----CTCTCCCA- 3' Irf2bp1 mmu-miR-207 beg:153 end:176 pic:3' CTCCCTCCTCTCGGTCCTCTTCG 5'& |.||| ||||||. | .|| &5' GGGGGGAGAGAGCTT---GTGGC 3' Irf2bp1 mmu-miR-20a beg:321 end:338 pic:3' GATGGACGTGATATTCGTGAAAT 5'& ||| |||||.|||| &5' ------GCAA---AAGCATTTTA 3' Irf2bp1 mmu-miR-2135 beg:461 end:481 pic:3' CAAAGC-CGGGGTTCTGGAGA 5'& || || |.|||.||| &5' ----CGCGCAAGAGGACTTCT 3' Irf2bp1 mmu-miR-2137 beg:188 end:209 pic:3' GAGGGACCCCGAGGGCGGCCG 5'& | ..|||||.|||.| ||| &5' -TGTTTGGGGTTCCTG--GGC 3' Irf2bp1 mmu-miR-2140 beg:70 end:89 pic:3' TGGTGGTTCTAGACGTGGA 5'& |||| |||.||| &5' --CACCCAACCCTGTACC- 3' Irf2bp1 mmu-miR-214 beg:230 end:251 pic:3' TGACGGACAGACACGGACGACA 5'& ||.|| || |||||||| &5' ---GCTTGGCTTT-CCTGCTGT 3' Irf2bp1 mmu-miR-217 beg:507 end:534 pic:3' AGGTCAGTCAAGGACT-ACGTCAT 5'& |||||| .| | ||| ||.|||| &5' TCCAGTGGGCTGCTGTTTGTAGTA 3' Irf2bp1 mmu-miR-2183 beg:184 end:203 pic:3' TCCTCCAGTCCCCAAGTT 5'& |||. ||. ||||||| &5' AGGGTGTTTGGGGTTC-- 3' Irf2bp1 mmu-miR-21star beg:506 end:527 pic:3' CTGTCGGGT-AGCTGACGACAAC 5'& |.||| | |.|||||||| &5' ----GTCCAGTGGGCTGCTGTT- 3' Irf2bp1 mmu-miR-21star beg:229 end:253 pic:3' CTG--TCGGGTAGCTGACGACAAC 5'& |.| .||.. || ||||||||| &5' GGCTTGGCTT-TC--CTGCTGTTG 3' Irf2bp1 mmu-miR-28 beg:4 end:22 pic:3' GAGTTATCTGACAC-TCGAGGAA 5'& |||| .|||.||| &5' --------ACTGCCAGGCTTCTT 3' Irf2bp1 mmu-miR-2861 beg:0 end:20 pic:3' GGCGGGCGGCGGTCCGGGG 5'& |.||| |.|||||||..| &5' CTGCCA-CTGCCAGGCTTC 3' Irf2bp1 mmu-miR-291a-3p beg:317 end:337 pic:3' CGTGTGTTTCACCTTCGTGAAA 5'& ||.||| |||||.||| &5' ----ACGAAGCAAAAGCATTTT 3' Irf2bp1 mmu-miR-294 beg:316 end:337 pic:3' TGTGTGTTTTCCCTTCGTGAAA 5'& ||.||. |||||.||| &5' ----ACGAAGCAAAAGCATTTT 3' Irf2bp1 mmu-miR-295 beg:318 end:337 pic:3' TCTGAGTTTTCATCATCGTGAAA 5'& || |||| ||||.||| &5' -GAAGCAAA------AGCATTTT 3' Irf2bp1 mmu-miR-302a beg:317 end:336 pic:3' AGTGGTTTTGTACCTTCGTGAAT 5'& |.||.|| |||||.|| &5' ----CGAAGCAA--AAGCATTT- 3' Irf2bp1 mmu-miR-302b beg:318 end:336 pic:3' GATGATTTTGTACCTTCGTGAAT 5'& .||.|| |||||.|| &5' -----GAAGCAA--AAGCATTT- 3' Irf2bp1 mmu-miR-302d beg:316 end:336 pic:3' TGTGAGTTTGTACCTTCGTGAAT 5'& || ||.|| |||||.|| &5' --ACG-AAGCAA--AAGCATTT- 3' Irf2bp1 mmu-miR-3072star beg:106 end:134 pic:3' GGACGGGAGGGAGC--------CCCAGGGA 5'& ||.|.|||| ||||||| &5' ----CCTTTCCTCTGCCCAGATGGGTCCC- 3' Irf2bp1 mmu-miR-30c-1star beg:342 end:355 pic:3' CCTCATTTGTTGGGAGAGGGTC 5'& |||||||||| &5' -----------CCCTCTCCCA- 3' Irf2bp1 mmu-miR-30c-2star beg:342 end:355 pic:3' TCTCATTTGTCGGAAGAGGGTC 5'& || ||||||| &5' -----------CCCTCTCCCA- 3' Irf2bp1 mmu-miR-343 beg:148 end:165 pic:3' AGACCCGTGTACTTCCCTCT 5'& ||||. |..|||||| &5' --TGGGT----GGGGGGAGA 3' Irf2bp1 mmu-miR-367 beg:546 end:569 pic:3' AGTGGTAACGA-------TTTCACGTTAA 5'& |||| ||.|||.|.| &5' -------TGCTCTAATTAAAGGTGTAGT- 3' Irf2bp1 mmu-miR-421 beg:235 end:255 pic:3' CGCGGGTTAATTACAGACAACTA 5'& ||.. || ||||||.| &5' --GCTTTCC---TG-CTGTTGGT 3' Irf2bp1 mmu-miR-448 beg:85 end:104 pic:3' TACCCTGTAGGATGT-ATACGTT 5'& || |||| ||||.| &5' ------CACCCTAACCTATGTA- 3' Irf2bp1 mmu-miR-483 beg:208 end:232 pic:3' GAGGGAAGAGAAGAGGGCAGAA 5'& ||||.||||. |.|||. |||| &5' CTCCTTTCTT-TTTCCTTTCTT 3' Irf2bp1 mmu-miR-484 beg:147 end:172 pic:3' TAGCC-CTCCCCTGACTCGGACT 5'& .| || |.||||| ||||.|| &5' GTGGGTGGGGGGAGAGAGCTTG- 3' Irf2bp1 mmu-miR-503 beg:230 end:253 pic:3' GACGTCATGACAAGGGCGACGAT 5'& || .|| ||||.||||.|. &5' --GCTTGGCT-TTCCTGCTGTTG 3' Irf2bp1 mmu-miR-532-3p beg:145 end:162 pic:3' ACGTTCGGAAC-CCACACCCTCC 5'& ||| || |||||.|| &5' --------TTGTGG-GTGGGGGG 3' Irf2bp1 mmu-miR-615-5p beg:276 end:299 pic:3' CTAGG--CTCGTGGCCCCTGGGGG 5'& .||| ||| ||||||.|| &5' -GTCCTTGAGAA---GGGACCTCC 3' Irf2bp1 mmu-miR-665 beg:193 end:213 pic:3' TCCCT-GGAGTCGGAGGACCA 5'& .||| ||| .||| ||| &5' GGGGTTCCTGGGCC-CCT--- 3' Irf2bp1 mmu-miR-667 beg:175 end:195 pic:3' GAACCCGACCCACCG-TCCACAGT 5'& ||| .|||||. &5' ------CTGTCAGAGAGGGTGTT- 3' Irf2bp1 mmu-miR-669h-5p beg:92 end:105 pic:3' CGTGAGTTGATATGTGGGTACGTA 5'& |||.|||.|| &5' --------------ACCTATGTAT 3' Irf2bp1 mmu-miR-686 beg:307 end:328 pic:3' AGAAGTGGCAGACCCTTCGTTA 5'& ||||.|. ||||||| &5' TCTTTATAAAC---GAAGCAA- 3' Irf2bp1 mmu-miR-705 beg:336 end:357 pic:3' ACGGGTGGGGTGGAGGGTGG 5'& ||..| |||| .|||||||| &5' TGTTC-CCCC-TCTCCCACC 3' Irf2bp1 mmu-miR-708 beg:159 end:180 pic:3' GGGTCGATCTAACATTCGAGGAA 5'& || || |||| .|||||| &5' ---AGAGAGCTTGT-GGCTCCT- 3' Irf2bp1 mmu-miR-742 beg:226 end:244 pic:3' AAATGGGTCGTACCACCGAAAG 5'& |. || |||||||| &5' ----CTTGGCT---TGGCTTTC 3' Irf2bp1 mmu-miR-761 beg:229 end:251 pic:3' ACACAGTCAAAGTG---GGACGACG 5'& | | || .| |||||||. &5' ----TTGGCTTGGCTTTCCTGCTGT 3' Irf2bp1 mmu-miR-764-3p beg:0 end:22 pic:3' TGTCAACGGTGATA--CCGGAGGA 5'& |||||||. |||.||.| &5' -----TGCCACTGCCAGGCTTCTT 3' Irf2bp1 mmu-miR-767 beg:485 end:504 pic:3' ACGAGTCTGTTGG--TACCACGT 5'& ||| ||. .|||||| &5' ------GACCACTAGGTGGTGC- 3' Irf2bp1 mmu-miR-876-3p beg:477 end:496 pic:3' ACTTAATGAAACATTTGGTGAT 5'& |.| |||| .||||||| &5' -----TGCGTTGT-GACCACTA 3' Irf2bp1 mmu-miR-877 beg:105 end:121 pic:3' GGGACGCGGTAGAGGAGATG 5'& || |.||||||.| &5' -------CCCTTTCCTCTGC 3' Irf2bp1 mmu-miR-877star beg:148 end:168 pic:3' ACCCTCCTCCCTCTTCTCCTGT 5'& |||| ||.||||| |||| &5' TGGGTGGGGGGAG-AGAG---- 3' Irf2bp1 mmu-miR-93 beg:321 end:337 pic:3' GATGGACGTGCTTGTCGTGAAAC 5'& ||| ||||.||| &5' ------GCAAA---AGCATTTT- 3'

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Irf2bp1 RAID00004867 mmu-miR-325-3p miRNA MIMAT0004640 Irf2bp1 mRNA 272359 Prediction 0.2202 Irf2bp1 RAID00101134 mmu-miR-6935-5p miRNA MIMAT0027770 Irf2bp1 mRNA 272359 Prediction 0.1828 Irf2bp1 RAID00146280 mmu-miR-742-3p miRNA MIMAT0004237 Irf2bp1 mRNA 272359 Prediction 0.1828 Irf2bp1 RAID00202117 mmu-miR-103-3p miRNA MIMAT0000546 Irf2bp1 mRNA 272359 Prediction 0.1828 Irf2bp1 RAID00378006 mmu-miR-34a-5p miRNA MIMAT0000542 Irf2bp1 mRNA 272359 Prediction 0.1828 Irf2bp1 RAID00425200 mmu-miR-434-5p miRNA MIMAT0001421 Irf2bp1 mRNA 272359 Prediction 0.1828 Irf2bp1 RAID00480356 mmu-miR-298-5p miRNA MIMAT0000376 Irf2bp1 mRNA 272359 Prediction 0.1828 Irf2bp1 RAID00501127 mmu-miR-340-5p miRNA MIMAT0004651 Irf2bp1 mRNA 272359 Prediction 0.2381 Irf2bp1 RAID00565334 mmu-miR-449c-5p miRNA MIMAT0003460 Irf2bp1 mRNA 272359 Prediction 0.1828 Irf2bp1 RAID00587365 mmu-miR-3072-5p miRNA MIMAT0014852 Irf2bp1 mRNA 272359 Prediction 0.1828 Irf2bp1 RAID00621909 mmu-miR-7014-5p miRNA MIMAT0027932 Irf2bp1 mRNA 272359 Prediction 0.1828 Irf2bp1 RAID00679233 mmu-miR-3084-5p miRNA MIMAT0014876 Irf2bp1 mRNA 272359 Prediction 0.1828 Irf2bp1 RAID00745450 mmu-miR-107-3p miRNA MIMAT0000647 Irf2bp1 mRNA 272359 Prediction 0.2202 Irf2bp1 RAID00883835 mmu-miR-5113 miRNA MIMAT0020621 Irf2bp1 mRNA 272359 Prediction 0.1828 Irf2bp1 RAID00916010 mmu-miR-124-3p miRNA MIMAT0000134 Irf2bp1 mRNA 272359 Prediction 0.1828 Irf2bp1 RAID00932863 mmu-miR-214-3p miRNA MIMAT0000661 Irf2bp1 mRNA 272359 Prediction 0.1828 Irf2bp1 RAID01018401 mmu-miR-1231-5p miRNA MIMAT0022357 Irf2bp1 mRNA 272359 Prediction 0.1828 Irf2bp1 RAID01055166 mmu-miR-8100 miRNA MIMAT0031403 Irf2bp1 mRNA 272359 Prediction 0.1828 Irf2bp1 RAID01061918 mmu-miR-6946-5p miRNA MIMAT0027792 Irf2bp1 mRNA 272359 Prediction 0.1828 Irf2bp1 RAID01128796 mmu-miR-6942-5p miRNA MIMAT0027784 Irf2bp1 mRNA 272359 Prediction 0.1828 Irf2bp1 RAID01166805 mmu-miR-6971-5p miRNA MIMAT0027844 Irf2bp1 mRNA 272359 Prediction 0.1828 Irf2bp1 RAID01277218 mmu-miR-34b-5p miRNA MIMAT0000382 Irf2bp1 mRNA 272359 Prediction 0.1828 Irf2bp1 RAID01385288 mmu-miR-135a-2-3p miRNA MIMAT0017064 Irf2bp1 mRNA 272359 Prediction 0.1828 Irf2bp1 RAID01512079 mmu-miR-296-3p miRNA MIMAT0004576 Irf2bp1 mRNA 272359 Prediction 0.1828 Irf2bp1 RAID01558341 mmu-miR-6922-5p miRNA MIMAT0027744 Irf2bp1 mRNA 272359 Prediction 0.1828 Irf2bp1 RAID01834598 mmu-miR-383-3p miRNA MIMAT0017082 Irf2bp1 mRNA 272359 Prediction 0.1828 Irf2bp1 RAID02397816 mmu-miR-423-5p miRNA MIMAT0004825 Irf2bp1 mRNA 272359 Prediction 0.1828 Irf2bp1 RAID02417713 mmu-miR-6921-5p miRNA MIMAT0027742 Irf2bp1 mRNA 272359 Prediction 0.1828 Irf2bp1 RAID02499177 mmu-miR-5107-5p miRNA MIMAT0020615 Irf2bp1 mRNA 272359 Prediction 0.1828 Irf2bp1 RAID02767776 mmu-miR-7008-5p miRNA MIMAT0027920 Irf2bp1 mRNA 272359 Prediction 0.1828 Irf2bp1 RAID02792606 mmu-miR-761 miRNA MIMAT0003893 Irf2bp1 mRNA 272359 Prediction 0.1828 Irf2bp1 RAID02808104 mmu-miR-6905-5p miRNA MIMAT0027710 Irf2bp1 mRNA 272359 Prediction 0.1828 Irf2bp1 RAID03021279 mmu-miR-489-3p miRNA MIMAT0003112 Irf2bp1 mRNA 272359 Prediction 0.1828 Irf2bp1 RAID03050622 mmu-miR-6993-5p miRNA MIMAT0027888 Irf2bp1 mRNA 272359 Prediction 0.1828 Irf2bp1 RAID03240027 mmu-miR-7073-5p miRNA MIMAT0028052 Irf2bp1 mRNA 272359 Prediction 0.1828 Irf2bp1 RAID03291785 mmu-miR-376c-3p miRNA MIMAT0003183 Irf2bp1 mRNA 272359 Prediction 0.1828 Irf2bp1 RAID03458986 mmu-miR-34c-5p miRNA MIMAT0000381 Irf2bp1 mRNA 272359 Prediction 0.1828 Irf2bp1 RAID03585568 mmu-mir-325 miRNA MI0000597 Irf2bp1 mRNA 272359 Prediction 0.1828 Irf2bp1 RAID03770472 mmu-miR-6916-5p miRNA MIMAT0027732 Irf2bp1 mRNA 272359 Prediction 0.1828 Irf2bp1 RAID03874991 mmu-miR-7049-3p miRNA MIMAT0028003 Irf2bp1 mRNA 272359 Prediction 0.1828 Irf2bp1 RAID03895765 mmu-miR-449b miRNA MIMAT0005447 Irf2bp1 mRNA 272359 Prediction 0.1828 Irf2bp1 RAID03901262 mmu-miR-1298-3p miRNA MIMAT0014810 Irf2bp1 mRNA 272359 Prediction 0.1828 Irf2bp1 RAID03923802 mmu-miR-449a-5p miRNA MIMAT0001542 Irf2bp1 mRNA 272359 Prediction 0.1828 Irf2bp1 RAID03947416 mmu-miR-705 miRNA MIMAT0003495 Irf2bp1 mRNA 272359 Prediction 0.1828 Irf2bp1 RAID04030319 mmu-miR-142a-5p miRNA MIMAT0000154 Irf2bp1 mRNA 272359 Prediction 0.1828 Irf2bp1 RAID04036344 mmu-miR-1938 miRNA MIMAT0009402 Irf2bp1 mRNA 272359 Prediction 0.1828