DNA & RNA Element - AREsite Gene Name Motif CDS Area ARE Area Evidence Rnf222 ATTTA 295-930 2451-2455 Rnf222 WTATTTATW 295-930 2449-2457 Rnf222 WWATTTAWW 295-930 2449-2457

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000129 mmu-miR-30a* 320040 Rnf222 cgacguuuGUAGGCUGACUUUc | | : ||||||| gcuaauccCUUGUCACUGAAAa 2 15 1188 1209 [mm9:11:68707934-68707955:+] 0.4944 142 7 -9.34 -0.1968 MIMAT0004525 mmu-miR-99b* 320040 Rnf222 gccugggUGUCUGUGCUCGAAc :||| | ||||||| gaagaaaGCAG-C-CGAGCUUg 2 16 1044 1063 [mm9:11:68707790-68707809:+] 0.6942 143 7 -20.87 -0.1331 MIMAT0004539 mmu-miR-183* 320040 Rnf222 aauaCCGGGAAGCC---AUUAAGUg | ::|| || ||||||| cugaGAUUCUAGGGAACUAAUUCAa 2 19 1599 1623 [mm9:11:68708345-68708369:+] 0.5984 141 7 -10.88 -0.3662 MIMAT0000240 mmu-miR-207 320040 Rnf222 cuccCUCCUCUCGGUCCUC-UUCg ||||| || :|||| ||| ugcaGAGGAAAG--GGGAGCAAGg 2 20 10 31 [mm9:11:68706756-68706777:+] 0.5152 124 0 -24.87 -0.1062 MIMAT0000249 mmu-miR-30e* 320040 Rnf222 cgacAUUUGUAGGC--UGACUUUc ||| | ::| ||||||| aagcUAAUCCCUUGUCACUGAAAa 2 19 1186 1209 [mm9:11:68707932-68707955:+] 0.4944 145 7 -9.59 -0.1968 MIMAT0004572 mmu-miR-290-3p 320040 Rnf222 ccCGAAUUUUGAU-CCGCCG-UGAAa || | |||: || ||| |||| caGCCGCACACUGUGGAGGCUACUUc 2 23 1682 1707 [mm9:11:68708428-68708453:+] 0.5984 121 0 -14.25 -0.4783 MIMAT0000370 mmu-miR-292-3p 320040 Rnf222 uguGAGUUUUGGACCGCCG-UGAAa | || | : ||| ||| |||| agcCGCACACUGUGGAGGCUACUUc 2 22 1683 1707 [mm9:11:68708429-68708453:+] 0.5984 125 0 -15.00 -0.4783 MIMAT0004581 mmu-miR-34b-3p 320040 Rnf222 cuACCGUCACCUCAAUC-ACUAa ||||| | || ||| |||| uuUGGCA-UCCAG-UAGCUGAUc 2 21 1247 1267 [mm9:11:68707993-68708013:+] 0.4944 120 0 -10.91 -0.1781 MIMAT0004583 mmu-miR-130b* 320040 Rnf222 ucaucacguuguccCUUUCUCa ||||||| caacccaucaucuuGAAAGAGg 2 9 621 642 [mm9:11:68707367-68707388:+] 0.5071 140 7 -8.84 -0.3391 MIMAT0004624 mmu-miR-15a* 320040 Rnf222 acucCGUCGUGUCAUAC-CGGAc || ||:| |||| |||| cuuaGCCUCAUA-UAUGAGCCUc 2 19 569 590 [mm9:11:68707315-68707336:+] 0.5071 120 0 -14.57 -0.3218 MIMAT0004630 mmu-miR-26b* 320040 Rnf222 cucGGUUCAUUACCUCUUGUCc ::||| : | |||||||| cuuUUAAG-GCUAGAGAACAGa 2 20 1452 1472 [mm9:11:68708198-68708218:+] 0.5561 153 7 -14.96 -0.2732 MIMAT0000544 mmu-miR-129-3p 320040 Rnf222 uacgaaaAACC--CC-AUUCCCGAa |||| || |||||||| ggccaggUUGGAAGGUUAAGGGCUu 2 16 158 182 [mm9:11:68706904-68706928:+] 0.4294 153 7 -21.66 -0.1171 MIMAT0000544 mmu-miR-129-3p 320040 Rnf222 uacgaaaaacccCAUUCCCGAa ||||||||| ccuagucaguaaGUAAGGGCUu 2 11 202 223 [mm9:11:68706948-68706969:+] 0.4329 150 7 -16.52 -0.1895 MIMAT0000593 mmu-miR-344 320040 Rnf222 ugUCAGUC--CGAAACCGAUCUAGu |||::| || | ||||||| gaAGUUGGAUGCAGU-CCUAGAUCc 2 22 532 555 [mm9:11:68707278-68707301:+] 0.5071 146 7 -14.10 -0.1496 MIMAT0000650 mmu-miR-17* 320040 Rnf222 gauGUUCACGGGAG--UGACGUCa | :|| | || ||||||| gacCUGGUACAAUCAAACUGCAGa 2 20 101 124 [mm9:11:68706847-68706870:+] 0.4258 146 7 -15.73 -0.3807 MIMAT0000744 mmu-miR-380-5p 320040 Rnf222 gcGUACAAGA-UACCA-GUUGGUa || | || ||| | |||||| ucCACCUCCUCAUGAUCCAACCAu 2 21 945 968 [mm9:11:68707691-68707714:+] 0.6355 123 6 -12.42 -0.4992 MIMAT0003409 mmu-miR-467a 320040 Rnf222 gcGUAUAUG-UACGUCCG-UGAAu |: | || :|| |||| |||| gcCGCACACUGUGGAGGCUACUUc 2 21 1684 1707 [mm9:11:68708430-68708453:+] 0.5984 123 0 -18.96 -0.4749 MIMAT0002110 mmu-miR-469 320040 Rnf222 ccUGUGGU-UCUAGU---UACUUUCUCCGu ||| || | | || :|||||||||| agACAACAGAAAACACUCGUGAAAGAGGCu 2 25 712 741 [mm9:11:68707458-68707487:+] 0.4467 166 7 -23.75 -0.1448 MIMAT0003170 mmu-miR-541 320040 Rnf222 ucacacugguuguagucUUAGGGAa ||||||| aaguccucgaggaagcuAAUCCCUu 2 9 1174 1198 [mm9:11:68707920-68707944:+] 0.4944 140 7 -14.90 -0.1318 MIMAT0004788 mmu-miR-20b* 320040 Rnf222 gaucuucacgAGUGUGACGUCa ||| ||||||| ccugguacaaUCAAACUGCAGa 2 13 103 124 [mm9:11:68706849-68706870:+] 0.4258 152 7 -18.50 -0.3807 MIMAT0003376 mmu-miR-302c 320040 Rnf222 ggugacUUUGUACC-UUC-GUGAa ||| :||| ||| |||| ucaaauAAAGGUGGAAAGCCACUu 2 17 1716 1739 [mm9:11:68708462-68708485:+] 0.5984 123 0 -15.65 -0.7331 MIMAT0003451 mmu-miR-677 320040 Rnf222 agUCUUCGAUUAG----UAGUGACUu :|||||||||| :||||||| gaGGAAGCUAAUCCCUUGUCACUGAa 2 21 1182 1207 [mm9:11:68707928-68707953:+] 0.4944 171 7 -26.92 -0.3570 MIMAT0003451 mmu-miR-677 320040 Rnf222 agUCUU-CGA--UUA-GUAGUGACUu :||: ||| ::| | ||||||| cuGGAGUGCUUGGGUACCUCACUGAa 2 21 1104 1129 [mm9:11:68707850-68707875:+] 0.4986 145 7 -15.15 -0.1446 MIMAT0003457 mmu-miR-680 320040 Rnf222 gggggUACAGUCGUC-UACGGg :| || |:|| ||||| cggagGUUUCUGUAGAAUGCCa 2 17 767 788 [mm9:11:68707513-68707534:+] 0.5417 120 0 -13.65 -0.1458 MIMAT0003461 mmu-miR-683 320040 Rnf222 cucCUGUGUCGAAUGUCGUCc | ||| | ||||||| cuuGUCACUGAAAACAGCAGa 2 19 1196 1216 [mm9:11:68707942-68707962:+] 0.4944 150 7 -15.19 -0.6656 MIMAT0003467 mmu-miR-688 320040 Rnf222 cuuauucaucaGCGGACGCu :||||||| ucuucccaaaaUGCCUGCGa 2 10 1656 1675 [mm9:11:68708402-68708421:+] 0.5984 141 7 -18.07 -0.7844 MIMAT0003474 mmu-miR-694 320040 Rnf222 gaagUCCGU-UGUAAAAGuc | |:| |:|||||| auaaAAGUAUAUAUUUUCuu 3 16 1745 1764 [mm9:11:68708491-68708510:+] 0.5984 130 0 -6.46 -0.1187 MIMAT0004826 mmu-miR-146b* 320040 Rnf222 ugGUCUUGACUCA-----GGGAUCCCg |||| |||| | :||||||| agCAGACCUGAUUUCCAGUCCUAGGGc 2 21 798 824 [mm9:11:68707544-68707570:+] 0.6355 155 7 -28.35 -0.1982 MIMAT0003500 mmu-miR-710 320040 Rnf222 gagUUGAGAGGGGUUCUGAACc ||||:| | ||||||| aggAACUUUGC---AGACUUGu 2 20 1539 1557 [mm9:11:68708285-68708303:+] 0.5709 151 7 -13.99 -0.1734 MIMAT0003510 mmu-miR-717 320040 Rnf222 ucUC-UUCCAUAGAGACAG-ACUc || |||| ||:|||| ||| uaAGUAAGG--GCUUUGUCAUGAg 2 21 211 232 [mm9:11:68706957-68706978:+] 0.4329 120 0 -22.71 -0.1366 MIMAT0003512 mmu-miR-450b-3p 320040 Rnf222 uaCGUACG--UUUUACAAGGGUUa |: ||| |:| | ||||||| guGUUUGCGGAGACUCUUCCCAAa 2 21 1642 1665 [mm9:11:68708388-68708411:+] 0.5984 155 7 -17.66 -0.1573 MIMAT0004838 mmu-miR-742* 320040 Rnf222 acuAAUCGUUGGUACACUCAu || |||: | ||||||| aacUUUGCAGACUUGUGAGUc 2 19 1542 1562 [mm9:11:68708288-68708308:+] 0.5709 162 7 -14.29 -0.2505 MIMAT0004842 mmu-miR-879 320040 Rnf222 ccGAAUCUCGAUAUUCGGAGa | || | | ||||||| cgCCUAUAAGGA-AAGCCUCa 2 20 1135 1154 [mm9:11:68707881-68707900:+] 0.5143 141 7 -13.48 -0.3543 MIMAT0004857 mmu-miR-147 320040 Rnf222 auCGUCUUCGUAA--AGGCGUGUg || || |: || ||||||| cuGC-GAUGUUUUCAGCCGCACAc 2 21 1670 1692 [mm9:11:68708416-68708438:+] 0.5984 145 7 -18.80 -0.1837 MIMAT0004867 mmu-miR-327 320040 Rnf222 uaggaGUACGGGGAGUUCa :||| ||||||| ucauaUAUGAGCCUCAAGc 2 15 576 594 [mm9:11:68707322-68707340:+] 0.5071 150 7 -16.32 -0.1216 MIMAT0004933 mmu-miR-878-3p 320040 Rnf222 agaugggUCACACCACAGUACg || | ||||||| guaaguaAGGGCUUUGUCAUGa 2 16 210 231 [mm9:11:68706956-68706977:+] 0.4329 143 7 -13.08 -0.2992 MIMAT0004861 mmu-miR-877 320040 Rnf222 gggacgcgguagAGGAGAUg ||||||| gcccacagaggaUCCUCUAc 2 9 492 511 [mm9:11:68707238-68707257:+] 0.5071 140 7 -19.92 -0.1038 MIMAT0005292 mmu-miR-582-3p 320040 Rnf222 aacccaAGUCAACA-AGUUGUCc |||| ||| ||||||| agcuugUCAGCUGUCUCAACAGa 2 17 1058 1080 [mm9:11:68707804-68707826:+] 0.5886 163 7 -16.64 -0.2552 MIMAT0005830 mmu-miR-466l 320040 Rnf222 uuauaCACACGUACAUAAAUAu || ||: ||||||| gggggGUCGGCG-AUAUUUAUu 2 18 1507 1527 [mm9:11:68708253-68708273:+] 0.5709 143 7 -8.05 -0.2189 MIMAT0005833 mmu-miR-669d 320040 Rnf222 uguauAUGUACGUGUGUGUUCa |: | || ||||||| caacuUGAAGCCAGACACAAGu 2 18 406 427 [mm9:11:68707152-68707173:+] 0.5298 149 7 -13.81 -0.1149 MIMAT0005836 mmu-miR-1186 320040 Rnf222 guacggaaaUUAAGGUCGUGAg | |||||||||| acagcagagACUUCCAGCACUg 2 14 1209 1230 [mm9:11:68707955-68707976:+] 0.4944 157 7 -19.54 -0.1707 MIMAT0005839 mmu-miR-669f 320040 Rnf222 uaugcacacacacauaCAUAUAc |||||| cacuuuuaaaauaaaaGUAUAUa 2 8 1735 1757 [mm9:11:68708481-68708503:+] 0.5984 120 6 -4.26 -0.2651 MIMAT0005858 mmu-miR-1197 320040 Rnf222 ucuucAUCUGGUACACAGGAu || |:|| ||||||| ugugcUA-AUCA-GUGUCCUg 2 17 1583 1601 [mm9:11:68708329-68708347:+] 0.5847 148 7 -17.33 -0.2720 MIMAT0007868 mmu-miR-1903 320040 Rnf222 acAGAGUCCUUCUUCUUCUUCc |||: | ||||:||||||| caUCUU-GAAAGAGGAAGAAGa 2 21 629 649 [mm9:11:68707375-68707395:+] 0.5071 170 7 -19.87 -0.5943 MIMAT0007873 mmu-miR-1896 320040 Rnf222 gaggagugggUGGUAGUCUCUc ||||||||||| acaucuggggACCAUCAGAGAa 2 13 1356 1377 [mm9:11:68708102-68708123:+] 0.5278 160 7 -23.24 -0.2388 MIMAT0007877 mmu-miR-1894-5p 320040 Rnf222 ucUCCGUCCACCAUCCCC-UCUc ||| || | |||||| ||| ugAGG-AGAGGCUAGGGGCAGAg 2 21 229 250 [mm9:11:68706975-68706996:+] 0.4202 126 0 -27.74 -0.1080 MIMAT0007878 mmu-miR-1894-3p 320040 Rnf222 gagggaagUGGGAGAGGGAACg | |: ||||||| cucgaggaAGCUAAUCCCUUGu 2 15 1179 1200 [mm9:11:68707925-68707946:+] 0.4944 142 7 -16.03 -0.2669 MIMAT0009390 mmu-miR-1927 320040 Rnf222 agucaggGAUUGUAGGUCUCCAg |||: : ||||||| uuuaaggCUAGAGAACAGAGGUg 2 17 1454 1476 [mm9:11:68708200-68708222:+] 0.5561 148 7 -16.96 -0.2903 MIMAT0009392 mmu-miR-1929 320040 Rnf222 gaGACGAGA-UA-UUUCAGGA-UCUu |||: || || |: ||||| ||| ggCUGUGCUAAUCAGUGUCCUGAGAu 2 22 1580 1605 [mm9:11:68708326-68708351:+] 0.5847 127 0 -18.84 -0.2508 MIMAT0009400 mmu-miR-1936 320040 Rnf222 cgGUCAAGUGUCGUC-CAGUCAAu ||| | | | | | ||||||| ucCAGGUGAGACCUGAGUCAGUUg 2 22 867 890 [mm9:11:68707613-68707636:+] 0.6355 156 7 -18.53 -0.1838 MIMAT0009402 mmu-miR-1938 320040 Rnf222 cuggcuuGAUGUUCA-GGGUGGc :|:||:|| |||||| cuguugcUUGCAGGUGCCCACCa 2 16 1415 1437 [mm9:11:68708161-68708183:+] 0.5414 127 6 -23.03 -0.2392 MIMAT0009408 mmu-miR-1943 320040 Rnf222 agGUCCACGGGUCUAGGAGGGAa ::|| ||:| | ||||||| ccUGGGGGCUCCCA-CCUCCCUc 2 22 914 935 [mm9:11:68707660-68707681:+] 0.6355 155 7 -26.14 -0.1538 MIMAT0009417 mmu-miR-1950 320040 Rnf222 acUGGUAUAGGAAUCUACGUCu |:|| | ||:||||||| gaAUCAGA-AGUUGGAUGCAGu 2 21 526 546 [mm9:11:68707272-68707292:+] 0.5071 154 7 -17.38 -0.2412 MIMAT0009421 mmu-miR-669o 320040 Rnf222 uguauuuguacGUGUGUGUUGAu ||: ||||||| guagcugauccCAUCCACAACUu 2 13 1258 1280 [mm9:11:68708004-68708026:+] 0.5043 148 7 -11.53 -0.1492 MIMAT0009423 mmu-miR-1952 320040 Rnf222 guCUUC--CUC-CCACCUCu |||| || ||||||| uaGAAGACAAGUGGUGGAGg 2 16 839 858 [mm9:11:68707585-68707604:+] 0.6355 145 7 -22.67 -0.1654 MIMAT0009442 mmu-miR-1969 320040 Rnf222 ugGGUA-CAAUUUCAGAGG-UAGAa |||| | |||| :||| |||| gcCCAUGGCUAAAUAUUCCUAUCUc 2 22 596 620 [mm9:11:68707342-68707366:+] 0.5071 132 0 -20.39 -0.4195 MIMAT0009459 mmu-miR-1982* 320040 Rnf222 ggagggguccuGGGAGGGUu |||||||| cccaccucccuCCCUCCCAa 2 10 924 943 [mm9:11:68707670-68707689:+] 0.6355 145 7 -32.49 -0.2577 MIMAT0011217 mmu-miR-2141 320040 Rnf222 uugaaaagacuGUGGAGGa ||||||| ccucccaagucCACCUCCu 2 9 936 954 [mm9:11:68707682-68707700:+] 0.6355 140 7 -14.70 -0.3037 MIMAT0015644 mmu-miR-1186b 320040 Rnf222 caccacguacggaaAUUAGGGu ||||||| guccucgaggaagcUAAUCCCu 2 9 1176 1197 [mm9:11:68707922-68707943:+] 0.4944 140 7 -13.12 -0.1006 MIMAT0015646 mmu-miR-3474 320040 Rnf222 cuUAGGUGCAG-AGGAGGGUCCc | ||| | | ::||||||| ccAGCCAGGCCAGUUUCCCAGGu 2 21 984 1006 [mm9:11:68707730-68707752:+] 0.6285 151 7 -21.97 -0.2424 MIMAT0000126 mmu-miR-27b 320040 Rnf222 cgUCUUGAAUCG-GUG-ACACUu :|||||| || || ||||| aaGGAACUUUGCAGACUUGUGAg 2 20 1538 1560 [mm9:11:68708284-68708306:+] 0.5709 130 0 -18.68 -0.2074 MIMAT0000135 mmu-miR-125a-5p 320040 Rnf222 aguGUCCAAUUUCCCAGAG-UCCCu ||| |:|| |||| |||| uucCAGUCCUAGGGCUCUCGAGGGu 2 22 810 834 [mm9:11:68707556-68707580:+] 0.6355 125 0 -23.80 -0.2333 MIMAT0000136 mmu-miR-125b-5p 320040 Rnf222 aguGUUCA--AUCCC-AGAG-UCCCu | ||| ||||| |||| |||| uuuCCAGUCCUAGGGCUCUCGAGGGu 2 20 809 834 [mm9:11:68707555-68707580:+] 0.6355 129 0 -23.23 -0.2376 MIMAT0000136 mmu-miR-125b-5p 320040 Rnf222 aguGUUCAAUCCCAGAG-UCCCu | || |:| |||| |||| uucCCAGGUGGAUUCUCUAGGGc 2 20 998 1020 [mm9:11:68707744-68707766:+] 0.6215 123 0 -17.93 -0.1163 MIMAT0000140 mmu-miR-128 320040 Rnf222 uuUCUCUGGCCAAGUGACACu | ||| |||||||||| acACAGA--AGUUCACUGUGu 2 20 1283 1301 [mm9:11:68708029-68708047:+] 0.5142 156 7 -18.80 -0.2560 MIMAT0000140 mmu-miR-128 320040 Rnf222 uuucucUGGCCAAGUGACACu | | | ||||||| guuuucAGCCGCACACUGUGg 2 16 1677 1697 [mm9:11:68708423-68708443:+] 0.5984 143 7 -18.59 -0.1252 MIMAT0000150 mmu-miR-138 320040 Rnf222 gccGGACUAAGUGUUGUGGUCGa | | | |:| |||||||| auuCAUUAGACGCCACACCAGCc 2 21 967 989 [mm9:11:68707713-68707735:+] 0.6355 156 7 -18.72 -0.2708 MIMAT0000208 mmu-miR-10b 320040 Rnf222 guGUUUAAGCCAAGAUGUCCCAu | | | | | ||||||||| ggCCACUGCUCUCCUACAGGGUc 2 22 360 382 [mm9:11:68707106-68707128:+] 0.5090 157 7 -17.34 -0.1249 MIMAT0000223 mmu-miR-193 320040 Rnf222 ugacccugaaacaUCCGGUCAa |||||||| cgccacaccagccAGGCCAGUu 2 10 977 998 [mm9:11:68707723-68707744:+] 0.6355 145 7 -15.46 -0.2479 MIMAT0000368 mmu-miR-291a-3p 320040 Rnf222 cgUGUGUUU-CACC-UUC-GUGAAa | |:||| |||| ||| ||||| ucAAAUAAAGGUGGAAAGCCACUUu 2 21 1716 1740 [mm9:11:68708462-68708486:+] 0.5984 134 0 -19.84 -0.7794 MIMAT0000372 mmu-miR-294 320040 Rnf222 ugUGUGUUUUC-CC-UUC-GUGAAa | |:|||:| || ||| ||||| ucAAAUAAAGGUGGAAAGCCACUUu 2 21 1716 1740 [mm9:11:68708462-68708486:+] 0.5984 130 0 -18.40 -0.7794 MIMAT0000373 mmu-miR-295 320040 Rnf222 ucugaGUUUUCAUC-AUC-GUGAAa :|||:||:| || ||||| ucaaaUAAAGGUGGAAAGCCACUUu 2 19 1716 1740 [mm9:11:68708462-68708486:+] 0.5984 125 0 -16.78 -0.7794 MIMAT0000380 mmu-miR-302a 320040 Rnf222 agugguUUUGUACC-UUC-GUGAAu ||| :||| ||| ||||| ucaaauAAAGGUGGAAAGCCACUUu 2 18 1716 1740 [mm9:11:68708462-68708486:+] 0.5984 128 0 -16.58 -0.7830 MIMAT0000537 mmu-miR-27a 320040 Rnf222 cgCCUUGAAUCG-GUG-ACACUu ||||||| || || ||||| aaGGAACUUUGCAGACUUGUGAg 2 20 1538 1560 [mm9:11:68708284-68708306:+] 0.5709 134 0 -21.38 -0.2074 MIMAT0000538 mmu-miR-31 320040 Rnf222 gucgAUACGGUCGUAGAA-CGGa | | |||||||||| ||| ccagUUUUCCAGCAUCUUAGCCu 2 19 554 576 [mm9:11:68707300-68707322:+] 0.5071 138 0 -29.82 -0.2381 MIMAT0000609 mmu-miR-351 320040 Rnf222 guccgAGUUUCCCGAGGAG-UCCCu || |||||| ||| |||| uccagUCCUAGGGCU-CUCGAGGGu 2 20 811 834 [mm9:11:68707557-68707580:+] 0.6355 129 0 -28.10 -0.2135 MIMAT0000609 mmu-miR-351 320040 Rnf222 guccGAGUUUCCCGAGGAG-UCCCu | ||:: || |:||| |||| guuuCCCAGGUGGAUUCUCUAGGGc 2 21 996 1020 [mm9:11:68707742-68707766:+] 0.6285 128 0 -21.20 -0.1235 MIMAT0000648 mmu-miR-10a 320040 Rnf222 guguuuaagccuaGAUGUCCCAu ||||||||| ggccacugcucucCUACAGGGUc 2 11 360 382 [mm9:11:68707106-68707128:+] 0.5090 150 7 -17.34 -0.1249 MIMAT0003151 mmu-miR-378 320040 Rnf222 ggaaGACUGAGGUUCAGG-UCa ||||:|:| ||||| || agacCUGAUUUCCAGUCCUAGg 2 18 801 822 [mm9:11:68707547-68707568:+] 0.6355 133 0 -20.34 -0.1443 MIMAT0000748 mmu-miR-383 320040 Rnf222 ucGGUGUCA-GUGGA--AG-ACUAGa ||| ||| ||||| || ||||| ucCCA-AGUCCACCUCCUCAUGAUCc 2 21 938 962 [mm9:11:68707684-68707708:+] 0.6355 128 0 -20.26 -0.4476 MIMAT0001095 mmu-miR-370 320040 Rnf222 ugGUCCAAGGUGGGGUC-GUCCg | | |||||||||| |||| guCUGUGUCCACCCCAGCCAGGc 2 21 1560 1582 [mm9:11:68708306-68708328:+] 0.5709 140 0 -34.02 -0.1104 MIMAT0001095 mmu-miR-370 320040 Rnf222 ugGUCCAAGGUGGGGUC-GUCCg :|| |||| |||| |||| auUAGACGCCACACCAGCCAGGc 2 21 971 993 [mm9:11:68707717-68707739:+] 0.6355 128 0 -27.12 -0.2094 MIMAT0003172 mmu-miR-542-3p 320040 Rnf222 aaagucaauaguuaGACAGUGu ||||||| agagacuuccagcaCUGUCACa 2 9 1214 1235 [mm9:11:68707960-68707981:+] 0.4944 140 7 -14.31 -0.5836 MIMAT0003374 mmu-miR-302b 320040 Rnf222 gaUGAUUUUGUACC-UUC-GUGAAu | ||||: :||| ||| ||||| caAAUAAAG-GUGGAAAGCCACUUu 2 22 1717 1740 [mm9:11:68708463-68708486:+] 0.5984 130 0 -14.14 -0.7830 MIMAT0003377 mmu-miR-302d 320040 Rnf222 ugugaGUUUGUACC-UUC-GUGAAu :||| :||| ||| ||||| ucaaaUAAAGGUGGAAAGCCACUUu 2 19 1716 1740 [mm9:11:68708462-68708486:+] 0.5984 129 0 -17.70 -0.7830 MIMAT0004186 mmu-miR-301b 320040 Rnf222 cgaaaCUGUUAUGGUAAC-GUGAc | :||| || ||| |||| aggaaGCUAAU-CCCUUGUCACUg 2 19 1183 1205 [mm9:11:68707929-68707951:+] 0.4944 120 0 -14.11 -0.2974 MIMAT0003727 mmu-miR-374 320040 Rnf222 gugAAUCGUCCAACAUAAUAUa | :||: | ||||||| gggUCGGCGAUAUUUAUUAUAg 2 20 1510 1531 [mm9:11:68708256-68708277:+] 0.5709 147 7 -5.98 -0.4582 MIMAT0003730 mmu-miR-592 320040 Rnf222 uguaguAGCGUAUAACUGUGUUa |:| | ||||||| accaacUUGAAGCCAGACACAAg 2 18 404 426 [mm9:11:68707150-68707172:+] 0.5298 141 7 -10.44 -0.1161 MIMAT0003889 mmu-miR-758 320040 Rnf222 aucaccuggucCAGUGUUu ||||||| cuuccagcacuGUCACAAa 2 9 1219 1237 [mm9:11:68707965-68707983:+] 0.4944 140 7 -15.19 -0.4317 MIMAT0004859 mmu-miR-193b 320040 Rnf222 ucgcccugaaacacCCGGUCAa ||||||| cgccacaccagccaGGCCAGUu 2 9 977 998 [mm9:11:68707723-68707744:+] 0.6355 140 7 -13.99 -0.2479 MIMAT0004889 mmu-miR-504 320040 Rnf222 cuaucucacgucugGUCCCAGa ||||||| ccacugcucuccuaCAGGGUCa 2 9 362 383 [mm9:11:68707108-68707129:+] 0.5090 140 7 -14.52 -0.4149 MIMAT0004936 mmu-miR-873 320040 Rnf222 uccucUGAGUGUUCA-AGGACg :|| |: ||| ||||| gcuguGCUAAUCAGUGUCCUGa 2 17 1581 1602 [mm9:11:68708327-68708348:+] 0.5847 120 0 -12.30 -0.3318

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G071604 Rnf222 Mus musculus 320040

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Rnf222 RAID00081209 mmu-miR-6904-5p miRNA MIMAT0027708 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID00155798 mmu-miR-6981-5p miRNA MIMAT0027864 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID00185284 mmu-miR-7688-3p miRNA MIMAT0029907 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID00257952 mmu-miR-542-3p miRNA MIMAT0003172 Rnf222 mRNA 320040 Prediction 0.2202 Rnf222 RAID00280374 mmu-miR-27a-3p miRNA MIMAT0000537 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID00282376 mmu-miR-7652-3p miRNA MIMAT0029811 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID00324781 mmu-miR-6971-3p miRNA MIMAT0027845 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID00326696 mmu-miR-7068-5p miRNA MIMAT0028042 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID00406324 mmu-miR-302a-3p miRNA MIMAT0000380 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID00414702 mmu-miR-302d-3p miRNA MIMAT0003377 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID00423503 mmu-miR-129-1-3p miRNA MIMAT0016994 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID00517460 mmu-miR-7020-5p miRNA MIMAT0027944 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID00522877 mmu-miR-6384 miRNA MIMAT0025130 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID00755010 mmu-miR-3106-5p miRNA MIMAT0014817 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID00827315 mmu-miR-7008-5p miRNA MIMAT0027920 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID00881067 mmu-miR-6934-3p miRNA MIMAT0027769 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID00891966 mmu-miR-677-5p miRNA MIMAT0003451 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID01051920 mmu-miR-7682-3p miRNA MIMAT0029885 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID01094452 mmu-miR-7066-5p miRNA MIMAT0028036 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID01159017 mmu-miR-383-5p miRNA MIMAT0000748 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID01283541 mmu-miR-128-3p miRNA MIMAT0000140 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID01523143 mmu-miR-10a-5p miRNA MIMAT0000648 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID01529262 mmu-miR-3088-3p miRNA MIMAT0014898 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID01674279 mmu-miR-688 miRNA MIMAT0003467 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID01747124 mmu-miR-670-3p miRNA MIMAT0017242 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID01845873 mmu-miR-149-3p miRNA MIMAT0016990 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID01907054 mmu-miR-873a-5p miRNA MIMAT0004936 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID01919716 mmu-miR-10b-5p miRNA MIMAT0000208 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID01981679 mmu-miR-6356 miRNA MIMAT0025099 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID02072848 mmu-miR-7234-5p miRNA MIMAT0028436 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID02084738 mmu-miR-295-3p miRNA MIMAT0000373 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID02318990 mmu-miR-31-5p miRNA MIMAT0000538 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID02319555 mmu-miR-3113-3p miRNA MIMAT0014960 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID02352322 mmu-miR-27b-3p miRNA MIMAT0000126 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID02393183 mmu-miR-193a-3p miRNA MIMAT0000223 Rnf222 mRNA 320040 Prediction 0.2202 Rnf222 RAID02397268 mmu-miR-6961-3p miRNA MIMAT0027823 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID02422624 mmu-miR-145a-3p miRNA MIMAT0004534 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID02426400 mmu-miR-7658-3p miRNA MIMAT0029823 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID02494325 mmu-miR-504-5p miRNA MIMAT0004889 Rnf222 mRNA 320040 Prediction 0.2202 Rnf222 RAID02530474 mmu-miR-592-5p miRNA MIMAT0003730 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID02573614 mmu-miR-291a-3p miRNA MIMAT0000368 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID02678899 mmu-miR-6991-3p miRNA MIMAT0027885 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID02700398 mmu-miR-125b-5p miRNA MIMAT0000136 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID02774712 mmu-miR-1982-5p miRNA MIMAT0009459 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID02787130 mmu-miR-3085-3p miRNA MIMAT0014879 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID02817184 mmu-miR-7069-5p miRNA MIMAT0028044 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID02863169 mmu-miR-138-5p miRNA MIMAT0000150 Rnf222 mRNA 320040 Prediction 0.2381 Rnf222 RAID02914408 mmu-miR-6947-3p miRNA MIMAT0027795 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID02918602 mmu-miR-153-5p miRNA MIMAT0016992 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID02939883 mmu-miR-193b-3p miRNA MIMAT0004859 Rnf222 mRNA 320040 Prediction 0.2381 Rnf222 RAID02991927 mmu-miR-5127 miRNA MIMAT0020638 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID02999247 mmu-miR-466l-3p miRNA MIMAT0005830 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID03038536 mmu-miR-302b-3p miRNA MIMAT0003374 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID03044800 mmu-miR-6928-3p miRNA MIMAT0027757 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID03080463 mmu-miR-294-3p miRNA MIMAT0000372 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID03139349 mmu-miR-1896 miRNA MIMAT0007873 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID03153426 mmu-miR-351-5p miRNA MIMAT0000609 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID03155088 mmu-miR-874-5p miRNA MIMAT0017268 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID03164444 mmu-miR-378a-3p miRNA MIMAT0003151 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID03179925 mmu-miR-301b-3p miRNA MIMAT0004186 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID03204326 mmu-miR-129-2-3p miRNA MIMAT0000544 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID03210383 mmu-miR-758-3p miRNA MIMAT0003889 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID03253352 mmu-miR-7009-5p miRNA MIMAT0027922 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID03255855 mmu-miR-6914-5p miRNA MIMAT0027728 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID03357402 mmu-miR-3073a-5p miRNA MIMAT0014854 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID03419396 mmu-miR-1943-5p miRNA MIMAT0009408 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID03546267 mmu-miR-370-3p miRNA MIMAT0001095 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID03568798 mmu-miR-7016-5p miRNA MIMAT0027936 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID03600539 mmu-miR-6935-5p miRNA MIMAT0027770 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID03655512 mmu-miR-125a-5p miRNA MIMAT0000135 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID03674097 mmu-miR-7233-5p miRNA MIMAT0028434 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID03734126 mmu-miR-3073b-5p miRNA MIMAT0022375 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID03824122 mmu-miR-374b-5p miRNA MIMAT0003727 Rnf222 mRNA 320040 Prediction 0.2202 Rnf222 RAID03911725 mmu-miR-3064-5p miRNA MIMAT0014834 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID03998077 mmu-miR-361-3p miRNA MIMAT0017075 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID04018341 mmu-miR-7052-3p miRNA MIMAT0028009 Rnf222 mRNA 320040 Prediction 0.1828 Rnf222 RAID04041514 mmu-miR-6967-5p miRNA MIMAT0027836 Rnf222 mRNA 320040 Prediction 0.1828