DNA & RNA Element - RepTar |
Gene Name | miRNA | Begin | End | Profile |
Wdr27 | mmu-miR-669d | beg:74 | end:86 | pic:3' TGTATATGTACGTGTGTGTTCA 5'& .|||||||| &5' -------------TACACAAGT 3' |
Wdr27 | mmu-miR-433 | beg:220 | end:239 | pic:3' TGTGGCTCCTCGGGTAGTACTA 5'& |.|| | |.||||||| &5' ---CTGACT-G-CTATCATGA- 3' |
Wdr27 | mmu-miR-1186 | beg:269 | end:280 | pic:3' GTACGGAAATTAAGGTCGTGAG 5'& |||||||| &5' --------------CAGCACTC 3' |
Wdr27 | mmu-miR-709 | beg:293 | end:308 | pic:3' AGGAGGACGGAGACGGAGG 5'& ||. |||||||| &5' -------GCTACTGCCTCC 3' |
Wdr27 | mmu-miR-140star | beg:134 | end:150 | pic:3' GGCACCAAGATGGGACACCAT 5'& ||. ||||||||. &5' --------CTGGCCTGTGGTG 3' |
Wdr27 | mmu-miR-509-3p | beg:248 | end:265 | pic:3' GGTAATGTCTTTACAGTTAGT 5'& |||.|.|||||||| &5' ------CAGGAGTGTCAATC- 3' |
Wdr27 | mmu-miR-770-5p | beg:132 | end:151 | pic:3' GCACCGGGTCTGTGCACCACGA 5'& ||| | | .||||||| &5' ----GCCTGG-CCTGTGGTGC- 3' |
Wdr27 | mcmv-miR-m01-3 | beg:313 | end:330 | pic:3' AGCTCCGTTGTCAG---CGAAGTGGC 5'& ||| ||||||.| &5' -----------GTCCTGGCTTCATC- 3' |
Wdr27 | mcmv-miR-m21-1 | beg:271 | end:291 | pic:3' GCCGAACTTGCACAGGGGATA 5'& || |||||.||. &5' --GCACTCCA-TGTCCTCTG- 3' |
Wdr27 | mcmv-miR-M23-2 | beg:111 | end:132 | pic:3' GGCGAACTGGCTC-----CGGGGGTA 5'& |..||| ||||||| &5' -------ATTGAGAAAATGCCCCCA- 3' |
Wdr27 | mcmv-miR-m59-1 | beg:211 | end:233 | pic:3' GACTGCCAGCTCCGTGACGATT 5'& |||. ||| | ||||||| &5' CTGGTAGTCCT-G-ACTGCTA- 3' |
Wdr27 | mmu-let-7a | beg:283 | end:307 | pic:3' TTGATATGT--TGGATGATGGAGT 5'& || |.|| | |||||.|||| &5' --CTCTGCATCAGCTACTGCCTC- 3' |
Wdr27 | mmu-let-7b | beg:285 | end:307 | pic:3' TTGGTGTGTTGGATGATGGAGT 5'& | ||. | |||||.|||| &5' --CTGCATCAGCTACTGCCTC- 3' |
Wdr27 | mmu-let-7c | beg:288 | end:307 | pic:3' TTGGTATGTTGGATGATGGAGT 5'& ||| ||. |||||.|||| &5' ---CAT-CAG-CTACTGCCTC- 3' |
Wdr27 | mmu-let-7d | beg:283 | end:307 | pic:3' TTGATACGT--TGGATGATGGAGA 5'& || |||| | |||||.|||| &5' --CTCTGCATCAGCTACTGCCTC- 3' |
Wdr27 | mmu-let-7f | beg:283 | end:307 | pic:3' TTGATATGTTA--GATGATGGAGT 5'& || |.|| |||||.|||| &5' --CTCTGCATCAGCTACTGCCTC- 3' |
Wdr27 | mmu-let-7g | beg:285 | end:307 | pic:3' TTGACATGTTTGATGATGGAGT 5'& ||| |. |.|||||.|||| &5' --CTGCATCAGCTACTGCCTC- 3' |
Wdr27 | mmu-miR-122 | beg:261 | end:282 | pic:3' GTTTGTGGTAACAG--TGTGAGGT 5'& ||| .||||||| &5' ------CCAGAAAGCAGCACTCCA 3' |
Wdr27 | mmu-miR-127star | beg:309 | end:328 | pic:3' TAGTCTCGGGAGACTCGAAGTC 5'& || |.||| .|||||| &5' -TCTT-GTCCT---GGCTTCA- 3' |
Wdr27 | mmu-miR-128 | beg:176 | end:197 | pic:3' TTTCTCT--GGCCAAGTGACACT 5'& |||. .| | ||||||||. &5' ---GAGGATTCAGATCACTGTGG 3' |
Wdr27 | mmu-miR-130bstar | beg:87 | end:106 | pic:3' TCATCACGTTGT-CCCTTTCTCA 5'& |. || |||||.||| &5' ------GTCACTTGGGAAGGAG- 3' |
Wdr27 | mmu-miR-139-5p | beg:176 | end:198 | pic:3' GACCTCTGTGCACGTGACATCT 5'& ||| || | ||||||.|. &5' --GGATTCAGAT-CACTGTGGG 3' |
Wdr27 | mmu-miR-145star | beg:241 | end:258 | pic:3' GTTCTTGTCATAAAGGTCCTTA 5'& |||| ||||||.| &5' -------AGTAAA-CCAGGAGT 3' |
Wdr27 | mmu-miR-1898 | beg:144 | end:163 | pic:3' CTAGGGGACACTT---GGAACTGGA 5'& ||| .|||||.| &5' --------GTGCGTCTTCTTGATC- 3' |
Wdr27 | mmu-miR-1907 | beg:299 | end:326 | pic:3' TGGAGGTCTAGGAGAC-GA-CGAG 5'& .|||||||||.||. || |||. &5' GCCTCCAGATTCTTGTCCTGGCTT 3' |
Wdr27 | mmu-miR-193 | beg:42 | end:65 | pic:3' TGACCCTGAAACATCCGGTCAA 5'& .||| .| |||| |||.|||| &5' GCTGATGCATTGTTGGCTAGTT 3' |
Wdr27 | mmu-miR-193b | beg:43 | end:65 | pic:3' TCGCCCTGAAACACCCGGTCAA 5'& | .| |||| |||.|||| &5' ---GATGCATTGTTGGCTAGTT 3' |
Wdr27 | mmu-miR-1946a | beg:121 | end:142 | pic:3' TTTTCACACACGGTGGTGA-CGGGCCGA 5'& |||| |||| |||.||| &5' ---------TGCCCCCACCAGCCTGGC- 3' |
Wdr27 | mmu-miR-1961 | beg:290 | end:307 | pic:3' AAGATTGATGATGGAGT 5'& || |.|||||.|||| &5' -TC-AGCTACTGCCTC- 3' |
Wdr27 | mmu-miR-196a | beg:288 | end:306 | pic:3' GGGTTGTTGTACTTTGATGGAT 5'& || ||.| |||.||| &5' --CATCAGCT----ACTGCCT- 3' |
Wdr27 | mmu-miR-196b | beg:287 | end:306 | pic:3' GGGTTGTTGTCCTTTGATGGAT 5'& | .|| ||| |||.||| &5' --CTGCATCAGCT-ACTGCCT- 3' |
Wdr27 | mmu-miR-201 | beg:225 | end:248 | pic:3' TTCTTGTTACGGAA------TGACTCAT 5'& |||. |||||||| &5' --------TGCTATCATGAAACTGAGTA 3' |
Wdr27 | mmu-miR-2140 | beg:274 | end:295 | pic:3' TGGTGGTTCT--AGACGTGGA 5'& | ||| | ||||||.| &5' --CTCCATGTCCTCTGCATC- 3' |
Wdr27 | mmu-miR-220 | beg:132 | end:150 | pic:3' TTCACAGACTGTGACACCACC 5'& | |||.| |||||||| &5' ----GCCTGGC-CTGTGGTG- 3' |
Wdr27 | mmu-miR-24-2star | beg:179 | end:200 | pic:3' TGACAAAGTCGAGT--CATCCGTG 5'& ||||| ||| ||.|||| &5' -----TTCAGATCACTGTGGGCA- 3' |
Wdr27 | mmu-miR-27a | beg:176 | end:197 | pic:3' CGC-CTTGAATC-GGTGACACTT 5'& | |.|.| || .|||||||. &5' --GAGGATTCAGATCACTGTGG- 3' |
Wdr27 | mmu-miR-27b | beg:175 | end:197 | pic:3' CGTCTTGAATC-GGTGACACTT 5'& | ||.|.| || .|||||||. &5' GGAGGATTCAGATCACTGTGG- 3' |
Wdr27 | mmu-miR-291a-3p | beg:74 | end:97 | pic:3' CGTGTGTTTCACCTTCGTGAAA 5'& .||||||. ||||. ||||| &5' -TACACAAGTTGGAGTCACTT- 3' |
Wdr27 | mmu-miR-299star | beg:233 | end:253 | pic:3' TACATACACCCTG-C-CATTTGGT 5'& || || | |||||||| &5' -------TGAAACTGAGTAAACCA 3' |
Wdr27 | mmu-miR-338-3p | beg:160 | end:179 | pic:3' GTTGTTTTAGTGACTACGACCT 5'& .|| |.|||||.|||| &5' ------GATGATTGATGTTGGA 3' |
Wdr27 | mmu-miR-342-5p | beg:258 | end:281 | pic:3' GAGTTAGTGTCTA---TCGTGGGGA 5'& |||||| |||| |||||.|| &5' -TCAATC-CAGAAAGCAGCACTCC- 3' |
Wdr27 | mmu-miR-3470a | beg:129 | end:150 | pic:3' GGTCGGACCAGATGTTTCACT 5'& ||||||||| ||. .||| &5' CCAGCCTGGCCTGT--GGTG- 3' |
Wdr27 | mmu-miR-3475 | beg:290 | end:311 | pic:3' AAGTTTGGTACACGGAGGTCT 5'& || |.|.| |||||||||| &5' -TC-AGCTAC-TGCCTCCAGA 3' |
Wdr27 | mmu-miR-433 | beg:326 | end:346 | pic:3' TGTGGCTCCTCGGGTAGTACTA 5'& || || . .||||||| &5' ---CCAATGA-TGTATCATGA- 3' |
Wdr27 | mmu-miR-505 | beg:40 | end:60 | pic:3' TCTTTTGGT--CGTTCACAACTGC 5'& .|. ||| |||||.| &5' -----GCTGATGCAT-TGTTGGC- 3' |
Wdr27 | mmu-miR-509-5p | beg:76 | end:92 | pic:3' TACTAACGGTGTAAGACCTCAT 5'& |||| .|||||| &5' --------CACAAGTTGGAGT- 3' |
Wdr27 | mmu-miR-541 | beg:357 | end:376 | pic:3' TCACACTGGTTGTAGTCTTAGGGAA 5'& ||| || |.|||||| &5' --------CAAAATAA-AGTCCCTT 3' |
Wdr27 | mmu-miR-546 | beg:122 | end:135 | pic:3' CTGAGGCACGGTGGTA 5'& .| || |||||| &5' -GC-CC---CCACCA- 3' |
Wdr27 | mmu-miR-665 | beg:192 | end:213 | pic:3' TCCCTGGAGTCG-GAGGACCA 5'& ||.| || | ||||||| &5' --GGGCAGCACCACTCCTGG- 3' |
Wdr27 | mmu-miR-673-3p | beg:304 | end:323 | pic:3' CCACGTGTCTTGAGT-CGGGGCCT 5'& ||| |.|| |.||.|| &5' ------CAG-ATTCTTGTCCTGG- 3' |
Wdr27 | mmu-miR-688 | beg:137 | end:148 | pic:3' CTTATTCATCAGCGGACGCT 5'& |||||.|. &5' ------------GCCTGTGG 3' |
Wdr27 | mmu-miR-720 | beg:99 | end:121 | pic:3' ACCTCC--GGGGTC-GCTCTA 5'& ||||| ||.|| .|||| &5' -GGAGGAACCTCAATTGAGA- 3' |
Wdr27 | mmu-miR-744star | beg:183 | end:202 | pic:3' TCCAACTCCAATCA-CCGTTGTC 5'& || || ||||.|| &5' -----GATCACTGTGGGCAGCA- 3' |
Wdr27 | mmu-miR-762 | beg:121 | end:139 | pic:3' CGAGACAGGGCCGG-GGTCGGGG 5'& || ||| || ||||||. &5' ----TG-CCC--CCACCAGCCT- 3' |
Wdr27 | mmu-miR-767 | beg:132 | end:151 | pic:3' ACGAGTCTGTTGGTACCACGT 5'& || | |.| |..|||||| &5' -GC-CTGGC--CTGTGGTGC- 3' |
Wdr27 | mmu-miR-877 | beg:271 | end:292 | pic:3' GGGACGC--GGTAGAGGAGATG 5'& || |||| ||||||.| &5' ----GCACTCCATGTCCTCTGC 3' |
Wdr27 | mmu-miR-98 | beg:287 | end:307 | pic:3' TTGTTATGTTGAATGATGGAGT 5'& .|| ||.| ||||.|||| &5' -GCAT--CAGC-TACTGCCTC- 3' |
Wdr27 | mghv-miR-M1-5 | beg:67 | end:78 | pic:3' CTCTGCTGGGCTAGAGTTGAGA 5'& |||||||| &5' --------------TCAACTCT 3' |