DNA & RNA Element - AREsite Gene Name Motif CDS Area ARE Area Evidence Trim16; Ebbp ATTTA 253-1923 2684-2688;3815-3819;3819-3823 Trim16; Ebbp TTATTTATT 253-1923 3817-3825 Trim16; Ebbp WTATTTATW 253-1923 3817-3825 Trim16; Ebbp WWATTTAWW 253-1923 3817-3825

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004529 mmu-miR-125b* 94092 Trim16 uccaGGGUUCU---UGGACUGAACa |:: ||| |::||||||| guugCUUUAGACUUAUUUGACUUGa 2 19 1178 1202 [mm9:11:62655655-62655679:+] 0.5286 149 7 -15.56 -0.9678 MIMAT0000143 mmu-miR-9* 94092 Trim16 ugaaagccaauagauCGAAAUa |||||| uuuugaaauaaaccuGCUUUAa 2 8 1935 1956 [mm9:11:62656412-62656433:+] 0.5010 120 6 -5.54 -0.1064 MIMAT0004531 mmu-miR-135a* 94092 Trim16 gcggugccgaGGUUAGGGAUAu |: |||||||| agaacauauaCUUAUCCCUAUa 2 13 1861 1882 [mm9:11:62656338-62656359:+] 0.5010 148 7 -16.02 -1.0554 MIMAT0004532 mmu-miR-136* 94092 Trim16 uucuGAGUAAA-C--UCUGCUACUa ||| ||| | ||||||||| cauuCUCCUUUAGACAGACGAUGAa 2 19 986 1010 [mm9:11:62655463-62655487:+] 0.5138 160 7 -16.34 -0.3079 MIMAT0000217 mmu-miR-188-5p 94092 Trim16 ggGAGGUGGUACGUUCCCUAc ||: ||| ||||||| uuCUUGCCCA---AAGGGAUa 2 20 850 867 [mm9:11:62655327-62655344:+] 0.5284 143 7 -16.11 -0.3477 MIMAT0004573 mmu-miR-293* 94092 Trim16 guuuUACAGUGUGUCA-AACUCa || | |||||| ||||| ccgcAUAGCCCACAGUCUUGAGc 2 19 576 598 [mm9:11:62655053-62655075:+] 0.4880 130 0 -14.66 -0.2041 MIMAT0004574 mmu-miR-294* 94092 Trim16 ucuAUCCCGGAGGUAAAACUCa ||| | :| ||||||| uuuUAGCGAGGUCCUUUUGAGa 2 20 775 796 [mm9:11:62655252-62655273:+] 0.5165 151 7 -14.30 -0.1287 MIMAT0000377 mmu-miR-299* 94092 Trim16 uacAUAC--ACCCUGCCAUUUGGu |||| || |: |||||||| aguUAUGCCUGAGG-GGUAAACCa 2 20 544 566 [mm9:11:62655021-62655043:+] 0.5163 156 7 -17.70 -0.1696 MIMAT0004578 mmu-miR-300* 94092 Trim16 ugUUUCCUAUUGGAGAGAAGUu |||| ||| ||||||| guAAAGAAUA----CUCUUCAa 2 21 1710 1727 [mm9:11:62656187-62656204:+] 0.5031 151 7 -13.75 -0.8417 MIMAT0004578 mmu-miR-300* 94092 Trim16 ugUUUCCUAUUGGAGAGAAGUu |||||| | ||||||| gcAAAGGA----C-CUCUUCAa 2 21 1657 1673 [mm9:11:62656134-62656150:+] 0.5041 145 7 -19.91 -0.2156 MIMAT0000378 mmu-miR-300 94092 Trim16 cuucucUCGAACGGGAACGUAu || |::||||||| uucucaAGACAGUUCUUGCAUg 2 17 138 159 [mm9:11:62654615-62654636:+] 0.5056 148 7 -15.82 -0.2506 MIMAT0004617 mmu-miR-148a* 94092 Trim16 ucagccucacAGAGUCUUGAAa ||| ||||||| caucuuugccUCUAAGAACUUa 2 13 1216 1237 [mm9:11:62655693-62655714:+] 0.5286 152 7 -9.56 -0.8801 MIMAT0004625 mmu-miR-16* 94092 Trim16 agUCGUCGUGUCAGUUAU-GACc :|:|| |||| |||| ||| aaGGUAG-ACAG-AAAUACCUGc 2 21 62 82 [mm9:11:62654539-62654559:+] 0.4776 120 0 -14.83 -0.1342 MIMAT0004627 mmu-miR-20a* 94092 Trim16 gaaauUCACGAGC--A-UUACGUCa ||| ||:| | ||||||| aagacAGUUCUUGCAUGAAUGCAGa 2 18 143 167 [mm9:11:62654620-62654644:+] 0.4555 151 7 -15.41 -0.1303 MIMAT0004636 mmu-miR-93* 94092 Trim16 gcccuucacgaucgAGUCGUCa ||||||| aggaucaccauuaaUCAGCAGc 2 9 716 737 [mm9:11:62655193-62655214:+] 0.5011 140 7 -14.61 -0.3992 MIMAT0000571 mmu-miR-331-3p 94092 Trim16 aaGAUCCU--AU-CCGGGUCCCCg |||||| || |||||||| uuCUAGGAUCUACCUCCCAGGGGu 2 20 2 25 [mm9:11:62654479-62654502:+] 0.5107 157 7 -31.14 -0.1068 MIMAT0004660 mmu-miR-19a* 94092 Trim16 caucACGUUGAUACGU-UUUGAu |||| ||||| ||||| uucuUGCAUGAAUGCAGAAACUc 2 19 150 172 [mm9:11:62654627-62654649:+] 0.4555 130 0 -12.11 -0.3534 MIMAT0004661 mmu-miR-28* 94092 Trim16 aggucgucGAGUGUUAGAUCAc :|||::||||||| gagauacuUUCAUGAUCUAGUg 2 15 1278 1299 [mm9:11:62655755-62655776:+] 0.5164 158 7 -18.72 -0.1080 MIMAT0002105 mmu-miR-464 94092 Trim16 auAGAGUGUCUUAUUUGAACCAu | | |||: | |||||||| caUGUGCCAGGCUCAACUUGGUc 2 22 630 652 [mm9:11:62655107-62655129:+] 0.4928 161 7 -15.34 -0.1190 MIMAT0004759 mmu-miR-466a-5p 94092 Trim16 auacaUGUACAUGUGUGU-GUAu :| | ||::|||| ||| aucaaGCCUUUAUGCACACCAUc 2 18 1016 1038 [mm9:11:62655493-62655515:+] 0.5510 121 0 -10.72 -0.5417 MIMAT0004790 mmu-miR-503* 94092 Trim16 gguccgUCACCUUUGU-UAUGAg ||| :|||| ||||| uaaccaAGUAAGAACAUAUACUu 2 17 1851 1873 [mm9:11:62656328-62656350:+] 0.5010 124 0 -13.04 -0.3784 MIMAT0004188 mmu-miR-802 94092 Trim16 uuccuACUUAGAAACAAUGACu ||: | ||||||| aauccUGGUCCAGAGUUACUGa 2 18 1363 1384 [mm9:11:62655840-62655861:+] 0.4988 141 7 -11.58 -0.2074 MIMAT0014816 mmu-miR-3099 94092 Trim16 agggguuggAGAGAGAUCGGAu |: | ||||||| ggauuucuaUUGCCCUAGCCUg 2 14 1046 1067 [mm9:11:62655523-62655544:+] 0.5510 145 7 -17.56 -0.1087 MIMAT0003737 mmu-miR-666-5p 94092 Trim16 ccgaGAGUGUCGACACGGG-CGa ||||:: | ||||| || cuucCUCAUGUCACUGCCCUGCa 2 19 1253 1275 [mm9:11:62655730-62655752:+] 0.5141 122 0 -16.50 -0.2964 MIMAT0003455 mmu-miR-679 94092 Trim16 ugguucucaGUGGAGUGUCAGg :| | ||||||| uaaaccgcaUAGCCCACAGUCu 2 14 572 593 [mm9:11:62655049-62655070:+] 0.4880 145 7 -20.86 -0.1357 MIMAT0003459 mmu-miR-682 94092 Trim16 gucugaagugacaCUGACGUc ||||||| caaaccauaacaaGACUGCAc 2 9 269 289 [mm9:11:62654746-62654766:+] 0.5571 140 7 -13.51 -0.5115 MIMAT0003461 mmu-miR-683 94092 Trim16 cuCCU-GUGUCGAAU-GUCGUCc ||| ||| :| | |||||| caGGAUCACCAUUAAUCAGCAGc 2 20 715 737 [mm9:11:62655192-62655214:+] 0.5011 122 6 -18.05 -0.3998 MIMAT0003471 mmu-miR-692 94092 Trim16 cucacuccgcGAG-UUUCUCUa :|| ||||||| aagaauacucUUCAAAAGAGAa 2 12 1713 1734 [mm9:11:62656190-62656211:+] 0.5031 142 7 -9.20 -0.4188 MIMAT0003472 mmu-miR-693-5p 94092 Trim16 cuuuugaAAGCCUACACCGAc ||| | ||||||| uauggaaUUCAG-UGUGGCUu 2 15 1818 1837 [mm9:11:62656295-62656314:+] 0.5010 148 7 -13.61 -0.2480 MIMAT0003472 mmu-miR-693-5p 94092 Trim16 cuuuUGAAAGCCU--ACACCGAc ::| |:| | ||||||| gucuGUUGUUGAACUUGUGGCUa 2 18 491 513 [mm9:11:62654968-62654990:+] 0.5188 144 7 -12.06 -0.8031 MIMAT0003476 mmu-miR-669b 94092 Trim16 uguACGUGUAC-GUGUGUU-UUGa | :| || ||||||| ||| auuUUUAAUUGACACACAAUAACa 2 20 1787 1810 [mm9:11:62656264-62656287:+] 0.5008 122 0 -10.49 -0.8501 MIMAT0003492 mmu-miR-702 94092 Trim16 cucgccccauuucCCACCCGu ||||||| gccugaagucccuGGUGGGCu 2 9 1063 1083 [mm9:11:62655540-62655560:+] 0.5510 140 7 -14.97 -0.1643 MIMAT0003493 mmu-miR-703 94092 Trim16 aaGAAAGGAAGACUUC-CAAAa | |||| ||| ||| |||| agCAUUCC-UCUUAAGAGUUUg 2 20 596 616 [mm9:11:62655073-62655093:+] 0.4880 129 0 -11.96 -0.3014 MIMAT0003501 mmu-miR-711 94092 Trim16 gaAUGUAGAGAGGGGC-CCAGGg || || |:|: || ||||| aaUAAAUGUUUUAGCGAGGUCCu 2 21 767 789 [mm9:11:62655244-62655266:+] 0.5046 124 0 -16.46 -0.2497 MIMAT0004236 mmu-miR-741 94092 Trim16 agAUGUAUCUUA-CCGUA-GAGAGu |: : :||:| | ||| ||||| uuUGAGAGGAGUAGUCAUCCUCUCu 2 22 790 814 [mm9:11:62655267-62655291:+] 0.5165 120 0 -14.49 -0.1060 MIMAT0004237 mmu-miR-742 94092 Trim16 aaaUGGGUCGUACCACCGAAAg |::|||: |||||||| ggaAUUCAGU---GUGGCUUUu 2 20 1821 1839 [mm9:11:62656298-62656316:+] 0.5010 151 7 -18.61 -0.2422 MIMAT0004237 mmu-miR-742 94092 Trim16 aaAUGGGUCG-UACC----ACCGAAAg ||||:: : |||| ||||||| aaUACCUGCUGAUGGUAGUUGGCUUUa 2 21 74 100 [mm9:11:62654551-62654577:+] 0.5082 150 7 -19.08 -0.6575 MIMAT0004237 mmu-miR-742 94092 Trim16 aaaugggucGUACCA-CCGAAAg | |||| |||||| ccugaagucCCUGGUGGGCUUUa 2 14 1064 1086 [mm9:11:62655541-62655563:+] 0.5510 121 6 -16.94 -0.3789 MIMAT0004238 mmu-miR-743a 94092 Trim16 agAUGAGUCGAACCACAGAAAg || |:| :| |||||||| aaUA-UUACUUCCGUGUCUUUu 2 21 1092 1112 [mm9:11:62655569-62655589:+] 0.5398 154 7 -13.53 -0.1125 MIMAT0004238 mmu-miR-743a 94092 Trim16 agauGAGUCGAACCACAGAAag :|: :|| |||||| uucuUUUUUUUUUUUGUCUUau 3 19 1767 1788 [mm9:11:62656244-62656265:+] 0.5006 126 0 -7.20 -0.1052 MIMAT0004840 mmu-miR-743b-3p 94092 Trim16 agAUAAGUCGUACUACAGAAAg |||| | : :||||||| aaUAUU-ACUUCCGUGUCUUUu 2 21 1092 1112 [mm9:11:62655569-62655589:+] 0.5398 146 7 -9.17 -0.1125 MIMAT0004840 mmu-miR-743b-3p 94092 Trim16 agauAAGUCGUACUACAGAAag ||: : | |||||| uucuUUUUUUUUUUUGUCUUau 3 19 1767 1788 [mm9:11:62656244-62656265:+] 0.5006 122 0 -6.22 -0.1063 MIMAT0004842 mmu-miR-879 94092 Trim16 ccGAAUCUCGAUAUUCGGAGa || ||: | ||||||| cuCUAAGGCACAAAAGCCUCu 2 20 170 190 [mm9:11:62654647-62654667:+] 0.4054 151 7 -16.34 -0.1415 MIMAT0004845 mmu-miR-881* 94092 Trim16 ucuacaCUGACAAUAGAGAGAc |||| ||||||| gccucaGACUCAGUUCUCUCUu 2 17 1578 1599 [mm9:11:62656055-62656076:+] 0.5010 148 7 -14.81 -0.2646 MIMAT0004848 mmu-miR-883a-5p 94092 Trim16 cauugaCGAUGAAGA-GAGUCGu ||||| | | |||||| gcaugaGCUACCUAUGCUCAGCu 2 17 1627 1649 [mm9:11:62656104-62656126:+] 0.5010 128 6 -17.03 -0.1049 MIMAT0004850 mmu-miR-883b-5p 94092 Trim16 acUG-ACGAUGGGUAAGAGUCAu || ||||| | |||||||| acACAUGCUAGC--UUCUCAGUa 2 21 1399 1419 [mm9:11:62655876-62655896:+] 0.4991 160 7 -19.84 -0.2477 MIMAT0004875 mmu-miR-466b-5p 94092 Trim16 guacaUGUACAUGUGUGU-GUAg :| | ||::|||| ||| aucaaGCCUUUAUGCACACCAUc 2 18 1016 1038 [mm9:11:62655493-62655515:+] 0.5510 121 0 -14.63 -0.5417 MIMAT0004879 mmu-miR-466e-5p 94092 Trim16 auacaUGUACAUGUGUGU-GUAg :| | ||::|||| ||| aucaaGCCUUUAUGCACACCAUc 2 18 1016 1038 [mm9:11:62655493-62655515:+] 0.5510 121 0 -14.63 -0.5417 MIMAT0004884 mmu-miR-466h 94092 Trim16 auGUGUGUUCG--UGUACGUGUGu ||: ||||| :|||||||| ucCAU-CAAGCCUUUAUGCACACc 2 21 1013 1035 [mm9:11:62655490-62655512:+] 0.5335 157 7 -21.39 -0.5846 MIMAT0004893 mmu-miR-574-5p 94092 Trim16 ugugugaguguGUGUGUGUGAGu | :|||||||| gcuguguguuuCUUACACACUCu 2 13 318 340 [mm9:11:62654795-62654817:+] 0.5092 148 7 -15.10 -0.4170 MIMAT0004897 mmu-miR-654-5p 94092 Trim16 ugUGUACAAGACGUCGAAUGGu ||||||| | ||||||| cuACAUGUUAU---GCUUACCu 2 21 511 529 [mm9:11:62654988-62655006:+] 0.5158 160 7 -19.49 -0.6050 MIMAT0004898 mmu-miR-654-3p 94092 Trim16 uuccacuaccAGUCGUC-UGUAu ||||||| |||| ucaccauuaaUCAGCAGCACAUg 2 13 720 742 [mm9:11:62655197-62655219:+] 0.5046 124 0 -16.44 -0.3734 MIMAT0004930 mmu-miR-466d-5p 94092 Trim16 guACAUGUACA-UGCGUGUGUGu || | : || | ||||||| ccUG-AGGGGUAAACCACACACu 2 21 551 572 [mm9:11:62655028-62655049:+] 0.5163 141 7 -13.61 -0.1108 MIMAT0004938 mmu-miR-875-3p 94092 Trim16 guaucgGAGUCAU----AAAAGUCc :|||||: ||||||| auggaaUUCAGUGUGGCUUUUCAGu 2 16 1819 1843 [mm9:11:62656296-62656320:+] 0.5010 146 7 -15.69 -0.1259 MIMAT0005291 mmu-miR-582-5p 94092 Trim16 ucauugaccaacuuGUUGACAu ||||||| ccgugauccugucuCAACUGUg 2 9 1155 1176 [mm9:11:62655632-62655653:+] 0.5286 140 7 -13.40 -0.2692 MIMAT0005292 mmu-miR-582-3p 94092 Trim16 aacccAAGUCAACAAGUU-GUCc ||| |||||||| ||| aaaucUUC--UUGUUCAAUCAGu 2 18 1133 1153 [mm9:11:62655610-62655630:+] 0.5286 126 0 -11.58 -0.1337 MIMAT0005293 mmu-miR-467e 94092 Trim16 ugUAUAUGUACGAGUGUG-AAUa :| | |||| | |||| ||| uuGUCUUCAUGAU-ACACAUUAg 2 21 398 419 [mm9:11:62654875-62654896:+] 0.5298 122 0 -10.47 -0.1234 MIMAT0005830 mmu-miR-466l 94092 Trim16 uuauacacacGUACAUAAAUAu :|| ||||||| uaccaaagacUAUUUAUUUAUu 2 13 1881 1902 [mm9:11:62656358-62656379:+] 0.5010 148 7 -3.62 -0.6823 MIMAT0005837 mmu-miR-1187 94092 Trim16 aauGUGUGUAUGUGUGUGU-GUAu || :| | :|::|||| ||| cauCAAGCCUUUAUGCACACCAUc 2 21 1015 1038 [mm9:11:62655492-62655515:+] 0.5510 124 0 -13.10 -0.5453 MIMAT0005845 mmu-miR-466k 94092 Trim16 agUGUACAUGUACAU---GUGUGUGu :| || | : ||| ||||||| auGCCUG-AGGGGUAAACCACACACu 2 22 548 572 [mm9:11:62655025-62655049:+] 0.5163 142 7 -16.72 -0.1075 MIMAT0005848 mmu-miR-466j 94092 Trim16 aaUGUGU-GUACG--UGUACGUGUGu |: || || || :|||||||| acAUCCAUCAAGCCUUUAUGCACACc 2 22 1010 1035 [mm9:11:62655487-62655512:+] 0.5335 151 7 -17.09 -0.5882 MIMAT0005849 mmu-miR-1191 94092 Trim16 aucCCGAUGUAUCAUUCUGAc | || || ||||||| uuuGACUUGAUUCUAAGACUc 2 19 1193 1213 [mm9:11:62655670-62655690:+] 0.5286 150 7 -9.10 -0.1376 MIMAT0005853 mmu-miR-669e 94092 Trim16 uaCUUGUACGUGUG----UGUUCUGu |:|: | || || ||||||| agGGAUCUUCAAACCAUAACAAGACu 2 21 260 285 [mm9:11:62654737-62654762:+] 0.5571 147 7 -12.26 -0.6211 MIMAT0005855 mmu-miR-467h 94092 Trim16 ugUAUAUGUACGUGUGUG-AAUa :| | |||| |:|||| ||| uuGUCUUCAUG-AUACACAUUAg 2 21 398 419 [mm9:11:62654875-62654896:+] 0.5298 126 0 -12.81 -0.1332 MIMAT0005859 mmu-miR-1198 94092 Trim16 gguucggUCGGUCCUUGUGUAu | :|: ||||||| cauaauaAAUCGCAAACACAUc 2 16 296 317 [mm9:11:62654773-62654794:+] 0.5331 143 7 -10.62 -0.1852 MIMAT0005860 mmu-miR-1199 94092 Trim16 ggCGCGCUGG-CCCUGAGUCu |: :|:|| ||||||| ucGUCUGGCCUCAGACUCAGu 2 19 1571 1591 [mm9:11:62656048-62656068:+] 0.5010 145 7 -23.76 -0.2594 MIMAT0007863 mmu-miR-1902 94092 Trim16 uuCAGUACGGAUG--ACGUGG-AGa ||||| || :| |||||| || ugGUCAU-CCAGCCUUGCACCAUCu 2 21 648 671 [mm9:11:62655125-62655148:+] 0.4977 125 0 -23.30 -0.1702 MIMAT0007864 mmu-miR-1897-5p 94092 Trim16 gggggaGAA-AGAGGUA-GGUUUc ||| || |:|| ||||| cauauaCUUAUCCCUAUACCAAAg 2 17 1865 1888 [mm9:11:62656342-62656365:+] 0.5010 123 0 -15.38 -0.7131 MIMAT0007874 mmu-miR-1904 94092 Trim16 ggAGGGAGGUCUCCUCGUCUUg |||:||| ||||||| ucUCCUUCC-----AGCAGAAa 2 21 1307 1323 [mm9:11:62655784-62655800:+] 0.5086 146 7 -23.89 -0.2745 MIMAT0009390 mmu-miR-1927 94092 Trim16 agUCAGGGAUUGUAGGUC-UCCAg | |::|| : |||||| |||| ugAAUUUCUUGGAUCCAGCAGGUa 2 22 1689 1712 [mm9:11:62656166-62656189:+] 0.5031 133 0 -19.81 -0.5010 MIMAT0009397 mmu-miR-1933-3p 94092 Trim16 uaUCAGUGUGACUACCAGGACc || || || ||||||| uuAGAAACUGUGUGGGUCCUGa 2 21 98 119 [mm9:11:62654575-62654596:+] 0.5106 152 7 -19.45 -0.4610 MIMAT0009422 mmu-miR-1951 94092 Trim16 auCGGUGUGGUC--AGAGG-UGAUg |:||: |||| |:||| |||| ccGUCAU-CCAGAAUUUCCAACUAg 2 21 238 261 [mm9:11:62654715-62654738:+] 0.5571 125 0 -19.33 -0.4813 MIMAT0009424 mmu-miR-1953 94092 Trim16 guCUUCGGACU--CUUGAAAGGGu |:: ||||| |||||||||| guGGGUCCUGAAUGAACUUUCCCg 2 21 109 132 [mm9:11:62654586-62654609:+] 0.5089 171 7 -27.74 -0.1621 MIMAT0009424 mmu-miR-1953 94092 Trim16 gucuucggacucuuGAAAGGGu ||||||| cacuggucgccuccCUUUCCCa 2 9 1440 1461 [mm9:11:62655917-62655938:+] 0.4991 140 7 -19.15 -0.1212 MIMAT0009425 mmu-miR-1954 94092 Trim16 uuGUCCCAGAGU-GAGA-CGUCa ||| || ||| |||| |||| gaCAGCGU-UCACCUCUCGCAGg 2 20 886 907 [mm9:11:62655363-62655384:+] 0.5199 128 0 -20.26 -0.1266 MIMAT0009433 mmu-miR-1960 94092 Trim16 ucGGGAGAAGAUUGUCGUG-ACc || |: : |:|||||| || caCCAUUAAUCAGCAGCACAUGa 2 21 721 743 [mm9:11:62655198-62655220:+] 0.5046 120 0 -16.48 -0.6835 MIMAT0009434 mmu-miR-1961 94092 Trim16 aaGAUUGAUGAUGGAGu |||: ||||||| uuCUAGGAUCUACCUCc 2 16 2 18 [mm9:11:62654479-62654495:+] 0.5107 147 7 -16.15 -0.1768 MIMAT0009436 mmu-miR-1963 94092 Trim16 cuuccGGAGUACUAG--AG-CAGGGu |:|| || || || ||||| caaauCUUCUUGUUCAAUCAGUCCCg 2 19 1132 1157 [mm9:11:62655609-62655634:+] 0.5286 121 0 -17.96 -0.4053 MIMAT0009446 mmu-miR-1971 94092 Trim16 agAGUCGGGUCGGAAAUg || :| |||||||| caUCCAUCAAGCCUUUAu 2 17 1011 1028 [mm9:11:62655488-62655505:+] 0.5335 152 7 -14.18 -0.4101 MIMAT0009456 mmu-miR-1839-5p 94092 Trim16 guucuggacAAGA---UAGAUGGAa |||| |||||||| --------aUUCUAGGAUCUACCUc 2 14 1 17 [mm9:11:62654478-62654494:+] 0.5107 148 7 -12.77 -0.4844 MIMAT0009458 mmu-miR-1981 94092 Trim16 cggUGCAGAUUCGGGUCGGAAAUg || || | :| |||||||| ugaACAUCCA--UCAAGCCUUUAu 2 22 1007 1028 [mm9:11:62655484-62655505:+] 0.5335 154 7 -14.18 -0.4164 MIMAT0012771 mmu-miR-432 94092 Trim16 gaCGGGUGACUAGAUGAG-GUUCu |:| || |: || ||| |||| gaGUCAAC-GGCCUUCUCUCAAGu 2 22 1337 1359 [mm9:11:62655814-62655836:+] 0.4986 123 0 -16.70 -0.1860 MIMAT0012772 mmu-miR-599 94092 Trim16 caaacuAUUUGACUGUGUu | ||:||||||| uuauuuUUAAUUGACACAc 2 14 1785 1803 [mm9:11:62656262-62656280:+] 0.5008 153 7 -11.95 -0.8735 MIMAT0015646 mmu-miR-3474 94092 Trim16 cuuAGGUGC-AGA-GGAGGGUCCc ||:| | ||| ||||||||| -auUCUAGGAUCUACCUCCCAGGg 2 20 1 23 [mm9:11:62654478-62654500:+] 0.5107 165 7 -31.79 -0.1257 MIMAT0000121 mmu-let-7g 94092 Trim16 uugacAUGUUUGAUGAUGGAGu | :|:: | ||||||| ---auUCUAGGAU-CUACCUCc 2 18 1 18 [mm9:11:62654478-62654495:+] 0.5107 143 7 -12.28 -0.1707 MIMAT0000122 mmu-let-7i 94092 Trim16 uugucguGUUUGAUGAUGGAGu :|:: | ||||||| ---auucUAGGAU-CUACCUCc 2 16 1 18 [mm9:11:62654478-62654495:+] 0.5107 141 7 -12.28 -0.1723 MIMAT0000125 mmu-miR-23b 94092 Trim16 ccauuagggaccGUUACACUa |||||||| aauggcagaaauCAAUGUGAa 2 10 1672 1692 [mm9:11:62656149-62656169:+] 0.5036 145 7 -12.11 -0.4239 MIMAT0000128 mmu-miR-30a 94092 Trim16 gaAGGUCAGCUCC---UACAAAUGu ||: :|:|| |||||||| caUCUUUAUGGGGUAAAUGUUUACa 2 21 373 397 [mm9:11:62654850-62654874:+] 0.5092 147 7 -18.24 -0.6365 MIMAT0000130 mmu-miR-30b 94092 Trim16 ucgACUCACAUCCUACAAAUGu ||:| ||| |||||||| uuaUGGG-GUA-AAUGUUUACa 2 20 378 397 [mm9:11:62654855-62654874:+] 0.5092 155 7 -16.79 -0.6254 MIMAT0000142 mmu-miR-9 94092 Trim16 agUAUGUCGAU--CUAU-UGGUUUCu |||:| :|| || ||||||| acAUAUACUUAUCCCUAUACCAAAGa 2 22 1864 1889 [mm9:11:62656341-62656366:+] 0.5010 151 7 -16.80 -1.0864 MIMAT0000158 mmu-miR-146a 94092 Trim16 uuggGUACCUUAAGUCAAGAGu | | :| ||||||||| cuggCCUCAGACUCAGUUCUCu 2 19 1575 1596 [mm9:11:62656052-62656073:+] 0.5010 154 7 -17.50 -0.1697 MIMAT0000158 mmu-miR-146a 94092 Trim16 uuGGGUACCUUAAGUCAA-GAGu || | ||:|| |||| ||| gcCCAAAGGGAU--AGUUCCUCa 2 21 855 875 [mm9:11:62655332-62655352:+] 0.5284 121 0 -19.61 -0.2535 MIMAT0000162 mmu-miR-152 94092 Trim16 gguucaaGACAGUACGUGACu ||| | ||||||| caugucaCUGCCCUGCACUGa 2 15 1259 1279 [mm9:11:62655736-62655756:+] 0.5141 154 7 -17.73 -0.1140 MIMAT0000162 mmu-miR-152 94092 Trim16 gguucAAGACAGUAC-GUGACu ||| ||||| ||||| ccugcUUC-CUCAUGUCACUGc 2 17 1249 1269 [mm9:11:62655726-62655746:+] 0.5141 122 0 -14.89 -0.1599 MIMAT0000163 mmu-miR-153 94092 Trim16 cuaGUGAAAACACU-GAU-ACGUu :||||| ||| ||| |||| agaUACUUUCAUGAUCUAGUGCAu 2 20 1279 1302 [mm9:11:62655756-62655779:+] 0.5164 130 0 -14.05 -0.1171 MIMAT0000246 mmu-miR-122 94092 Trim16 guuuguGGUAACA---GUGUGAGGu ::||||| ||||||| auuuauUUAUUGUAAGAACACUCCa 2 17 1892 1916 [mm9:11:62656369-62656393:+] 0.5010 147 7 -20.01 -0.9726 MIMAT0000247 mmu-miR-143 94092 Trim16 cucGAUGUC-AC-GAAGU-AGAGu ||:: | || ||||| |||| accCUGUUGAUGACUUCAUUCUCc 2 19 970 993 [mm9:11:62655447-62655470:+] 0.5114 120 0 -12.19 -0.3826 MIMAT0000248 mmu-miR-30e 94092 Trim16 gaaggUCAGUUCCUACAAAUGu :| :|| |||||||| uuaugGGGUAA--AUGUUUACa 2 18 378 397 [mm9:11:62654855-62654874:+] 0.5092 146 7 -13.03 -0.6328 MIMAT0000366 mmu-miR-290-5p 94092 Trim16 uuucacggGGGUAUCA-AACUCa |||| ||| ||||| ccgcauagCCCACAGUCUUGAGc 2 15 576 598 [mm9:11:62655053-62655075:+] 0.4880 126 0 -15.71 -0.1985 MIMAT0000369 mmu-miR-292-5p 94092 Trim16 guuuUCUCGGGGGUCA-AACUCa | ||||| |||| ||||| ccgcAUAGCCCACAGUCUUGAGc 2 19 576 598 [mm9:11:62655053-62655075:+] 0.4880 138 0 -20.72 -0.1966 MIMAT0000381 mmu-miR-34c 94092 Trim16 cguuagucGAUUGAUGUGACGGa || |: ||||||| ccugcuucCUCAUGUCACUGCCc 2 16 1249 1271 [mm9:11:62655726-62655748:+] 0.5141 147 7 -16.46 -0.2637 MIMAT0000382 mmu-miR-34b-5p 94092 Trim16 uguuagucGAUUAAUGUGACGGa || || ||||||| ccugcuucCUCAUGUCACUGCCc 2 16 1249 1271 [mm9:11:62655726-62655748:+] 0.5141 151 7 -14.42 -0.2637 MIMAT0000383 mmu-let-7d 94092 Trim16 uugaUACGUUGGAUGAUGGAGa || | | ||||||| ----AUUCUAGGAUCUACCUCc 2 19 1 18 [mm9:11:62654478-62654495:+] 0.5107 142 7 -12.16 -0.1836 MIMAT0000514 mmu-miR-30c 94092 Trim16 cgACUCUCACAUCCUACAAAUGu | | :| ||| |||||||| cuUUAUGGGGUA-AAUGUUUACa 2 22 376 397 [mm9:11:62654853-62654874:+] 0.5092 155 7 -14.51 -0.6254 MIMAT0000515 mmu-miR-30d 94092 Trim16 gaAGGUCAGCCCC---UACAAAUGu ||: :|||| |||||||| caUCUUUAUGGGGUAAAUGUUUACa 2 21 373 397 [mm9:11:62654850-62654874:+] 0.5092 151 7 -21.31 -0.6328 MIMAT0000516 mmu-miR-148a 94092 Trim16 uguuucaaGACAUCACGUGACu ||| ||||||| ucaugucaCUGCCCUGCACUGa 2 15 1258 1279 [mm9:11:62655735-62655756:+] 0.5141 146 7 -16.89 -0.1140 MIMAT0000520 mmu-miR-208a 94092 Trim16 uguucGAAAAACGAGCAGAAUa :||||| :|:|||||| uucuuUUUUUUUUUUGUCUUAu 2 18 1767 1788 [mm9:11:62656244-62656265:+] 0.5006 153 6 -14.39 -0.1199 MIMAT0000521 mmu-let-7a 94092 Trim16 uugaUAUGUUGGAUGAUGGAGu || | | ||||||| ----AUUCUAGGAUCUACCUCc 2 19 1 18 [mm9:11:62654478-62654495:+] 0.5107 142 7 -11.62 -0.1836 MIMAT0000522 mmu-let-7b 94092 Trim16 uugguguguuggauGAUGGAGu ||||||| ----auucuaggauCUACCUCc 2 9 1 18 [mm9:11:62654478-62654495:+] 0.5107 140 7 -11.47 -0.1854 MIMAT0000523 mmu-let-7c 94092 Trim16 uuggUAUGUUGGAUGAUGGAGu || | | ||||||| ----AUUCUAGGAUCUACCUCc 2 19 1 18 [mm9:11:62654478-62654495:+] 0.5107 142 7 -11.65 -0.1836 MIMAT0000524 mmu-let-7e 94092 Trim16 uugaUAUGUUGGAGGAUGGAGu || | | :||||||| ----AUUCUAGGAUCUACCUCc 2 19 1 18 [mm9:11:62654478-62654495:+] 0.5107 146 7 -12.36 -0.1836 MIMAT0000525 mmu-let-7f 94092 Trim16 uuGAUAUGUUAGAUGAUGGAGu :| || :|| ||||||| -aUUCUAGGAU---CUACCUCc 2 21 1 18 [mm9:11:62654478-62654495:+] 0.5107 144 7 -11.89 -0.1690 MIMAT0000532 mmu-miR-23a 94092 Trim16 ccuuuagggaccGUUACACUa |||||||| aauggcagaaauCAAUGUGAa 2 10 1672 1692 [mm9:11:62656149-62656169:+] 0.5036 145 7 -12.26 -0.4239 MIMAT0000538 mmu-miR-31 94092 Trim16 gucGAUACGGUCGUAGAACGGa :|:| |:| : ||||||| gacUUGU-CUAUUUUCUUGCCc 2 20 838 858 [mm9:11:62655315-62655335:+] 0.5284 149 7 -16.14 -0.4342 MIMAT0000538 mmu-miR-31 94092 Trim16 gucGAUAC--GGUCGUAG-AACGGa ||| | :| ||||| ||||| auuCUAAGACUCCGCAUCUUUGCCu 2 20 1202 1226 [mm9:11:62655679-62655703:+] 0.5286 126 0 -19.42 -0.4620 MIMAT0000542 mmu-miR-34a 94092 Trim16 uguUGGUCGA-UUCUGUGACGGu :|: || | | ||||||| ccuGCUUCCUCAUGUCACUGCCc 2 20 1249 1271 [mm9:11:62655726-62655748:+] 0.5141 146 7 -15.87 -0.2660 MIMAT0000545 mmu-miR-98 94092 Trim16 uuguUAUGUUGAAUGAUGGAGu || | | ||||||| ----AUUCUAGGAUCUACCUCc 2 19 1 18 [mm9:11:62654478-62654495:+] 0.5107 142 7 -10.78 -0.1836 MIMAT0000565 mmu-miR-328 94092 Trim16 ugccuucccgucuCUCCCGGUc |||||||| uuacugagacuauGAGGGCCAa 2 10 1378 1399 [mm9:11:62655855-62655876:+] 0.4991 145 7 -17.02 -0.2236 MIMAT0000580 mmu-miR-148b 94092 Trim16 uguuucaaGACACUACGUGACu ||| ||||||| ucaugucaCUGCCCUGCACUGa 2 15 1258 1279 [mm9:11:62655735-62655756:+] 0.5141 146 7 -16.81 -0.1140 MIMAT0000661 mmu-miR-214 94092 Trim16 ugacggacagacACGGACGACa | ||||||| gguagacagaaaUACCUGCUGa 2 11 64 85 [mm9:11:62654541-62654562:+] 0.4776 142 7 -13.71 -0.4414 MIMAT0000677 mmu-miR-7a 94092 Trim16 uguuGUUUUAGUGAUCAGAAGGu | ||||| || ||||||| cacuCCAAAUC-CU-GUCUUCCa 2 20 1910 1930 [mm9:11:62656387-62656407:+] 0.5010 159 7 -19.48 -0.8290 MIMAT0000678 mmu-miR-7b 94092 Trim16 uguuGUUUUAGUGUUCAGAAGGu | ||||| : ||||||| cacuCCAAAUCCU--GUCUUCCa 2 20 1910 1930 [mm9:11:62656387-62656407:+] 0.5010 152 7 -17.26 -0.8290 MIMAT0000748 mmu-miR-383 94092 Trim16 ucgGUG--UCAGUGGAAG-ACUAGa ||| || :||:||| ||||| cugCACUGAGAUACUUUCAUGAUCu 2 20 1271 1295 [mm9:11:62655748-62655772:+] 0.5164 130 0 -19.82 -0.2690 MIMAT0004745 mmu-miR-384-5p 94092 Trim16 uguAACGGAUCCUUAACAAAUGu || : :| || ||||||| ucuUUAUGGGGUAAAUGUUUACa 2 21 375 397 [mm9:11:62654852-62654874:+] 0.5092 152 7 -14.53 -0.6328 MIMAT0001095 mmu-miR-370 94092 Trim16 ugguccaAGGUGGGGUCGUCCg |: : :|||||||| gaauuucUUGGAUCCAGCAGGu 2 16 1690 1711 [mm9:11:62656167-62656188:+] 0.5031 147 7 -20.75 -0.2652 MIMAT0001420 mmu-miR-433 94092 Trim16 uguggcuccucgggUAGUACUa ||||||| gcuuaccucauuagAUCAUGAa 2 9 522 543 [mm9:11:62654999-62655020:+] 0.5445 140 7 -9.40 -0.5195 MIMAT0001542 mmu-miR-449a 94092 Trim16 ugGUCGAUUG-UUAU-GUGACGGu | ||| | ||: ||||||| acCUGCUUCCUCAUGUCACUGCCc 2 21 1248 1271 [mm9:11:62655725-62655748:+] 0.5141 146 7 -21.28 -0.2637 MIMAT0001546 mmu-miR-450a-5p 94092 Trim16 uauaauccUUGUGUAGCGUUUu ||:| |||||||| gggaucauAAUAAAUCGCAAAc 2 15 291 312 [mm9:11:62654768-62654789:+] 0.5331 158 7 -13.29 -0.5956 MIMAT0003172 mmu-miR-542-3p 94092 Trim16 aaAGUCAAUAGUUAGACAGUGu |||| | :| ||||||| gcUCAGGU---GA-CUGUCACc 2 21 222 239 [mm9:11:62654699-62654716:+] 0.5602 142 7 -13.24 -0.1338 MIMAT0003730 mmu-miR-592 94092 Trim16 uguAGUAGCGUAUAACUGUGUua |:||: : ||||||||| gucUUAUUUUUAAUUGACACAca 3 21 1782 1804 [mm9:11:62656259-62656281:+] 0.5008 144 0 -11.28 -0.1111 MIMAT0003893 mmu-miR-761 94092 Trim16 acaCAGUCAAAGUGGGACGACg | ||| :| ||||||| guaGACAGAAAUA-CCUGCUGa 2 20 65 85 [mm9:11:62654542-62654562:+] 0.4776 145 7 -17.87 -0.4103 MIMAT0003738 mmu-miR-496 94092 Trim16 cucuaaCCGGUACAUUAUGAGu ||: | | ||||||| ccagcaGGUAAAG-AAUACUCu 2 17 1703 1723 [mm9:11:62656180-62656200:+] 0.5031 146 7 -11.16 -0.2195 MIMAT0003456 mmu-miR-495 94092 Trim16 uuCUUCACGUGGUACAAACAAa ||: | ::|| |||||||| agGAGCUAUGCC-UGUUUGUUu 2 21 905 925 [mm9:11:62655382-62655402:+] 0.5114 158 7 -18.50 -0.1630 MIMAT0003460 mmu-miR-449c 94092 Trim16 gguCGAUCG-UUAC-GUGACGGa ||| | ||| ||||||| ccuGCUUCCUCAUGUCACUGCCc 2 19 1249 1271 [mm9:11:62655726-62655748:+] 0.5141 148 7 -20.56 -0.2684 MIMAT0003475 mmu-miR-146b 94092 Trim16 ucggauaccUUAAGUCAAGAGu :| ||||||||| cuggccucaGACUCAGUUCUCu 2 14 1575 1596 [mm9:11:62656052-62656073:+] 0.5010 153 7 -19.49 -0.1697 MIMAT0003475 mmu-miR-146b 94092 Trim16 ucGGAUACCUUAAGUCAA-GAGu || | ||:|| |||| ||| gcCCAAAGGGAU--AGUUCCUCa 2 21 855 875 [mm9:11:62655332-62655352:+] 0.5284 121 0 -15.13 -0.2535 MIMAT0003482 mmu-miR-499 94092 Trim16 uuuguagugacguuCAGAAUu |||||| ucuuuuuuuuuuuuGUCUUAu 2 8 1768 1788 [mm9:11:62656245-62656265:+] 0.5006 120 6 -4.83 -0.1272 MIMAT0005447 mmu-miR-449b 94092 Trim16 cggucGAUUGUUGUGACGGa || |:: ||||||| gcuucCUCAUGUCACUGCCc 2 16 1252 1271 [mm9:11:62655729-62655748:+] 0.5141 151 7 -16.33 -0.2637 MIMAT0004939 mmu-miR-208b 94092 Trim16 uguuuGGAAAACAAGCAGAAUa ::|||| ||:|||||| uucuuUUUUUUUUUUGUCUUAu 2 18 1767 1788 [mm9:11:62656244-62656265:+] 0.5006 153 6 -13.69 -0.1223 MIMAT0004941 mmu-miR-544 94092 Trim16 cucGAACGAUUUUUACGUCUUa ||||| | :||||||||| guuCUUGC-AUGAAUGCAGAAa 2 20 149 169 [mm9:11:62654626-62654646:+] 0.4555 169 7 -18.94 -0.3957 MIMAT0005850 mmu-miR-1192 94092 Trim16 uuaaaCCAGACAAACAAACAAa | | || |||||||| caggaGCUAUGCCUGUUUGUUu 2 18 904 925 [mm9:11:62655381-62655402:+] 0.5114 153 7 -12.27 -0.1630

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G063695 Trim16 Mus musculus 94092

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Trim16 mmu-miR-204 beg:855 end:866 pic:3' TCCGTATCCTACTGTTTCCCTT 5'& |||||||| &5' -------------CAAAGGGA- 3' Trim16 mmu-miR-211 beg:855 end:866 pic:3' TCCGTTTCCTACTGTTTCCCTT 5'& |||||||| &5' -------------CAAAGGGA- 3' Trim16 mmu-miR-128 beg:91 end:110 pic:3' TTTCTCTGGCCAAG-TGACACT 5'& |.|. |||||| &5' -----GGCTTTAGAAACTGTG- 3' Trim16 mmu-miR-151-5p beg:95 end:120 pic:3' TGATCT--GACAC-TCGAGGAGCT 5'& .|||| ||||| .| |||| || &5' -TTAGAAACTGTGTGGGTCCT-GA 3' Trim16 mmu-miR-128 beg:1156 end:1177 pic:3' TTTCTCTGGCCAAG-TGACACT 5'& || |.| || |||||| &5' ---GATCCTGTCTCAACTGTG- 3' Trim16 mmu-miR-151-5p beg:24 end:45 pic:3' TGATCTGACACTCGAGGAGCT 5'& .||| ||||||| | || |. &5' GCTA-ACTGTGA-CAACTGGG 3' Trim16 mmu-miR-188-5p beg:849 end:867 pic:3' GGGAGGTGGTACGTTCCCTAC 5'& |.| | ||| ||||||| &5' -CTTGC-CCA---AAGGGAT- 3' Trim16 mmu-miR-496 beg:1706 end:1723 pic:3' CTCTAACCGGTACATTATGAGT 5'& ||. ||||||| &5' ------GGTAAAG-AATACTC- 3' Trim16 mmu-miR-9 beg:1870 end:1890 pic:3' AGTATGTCGATCTATTGGTTTCT 5'& ||. ||| |||||||| &5' ---TATCCCTAT---ACCAAAGA 3' Trim16 mmu-miR-431star beg:1110 end:1124 pic:3' TCTTCGGGACGTTCTGCTGGAC 5'& ||| |||||||| &5' -----CCC------ACGACCTG 3' Trim16 mmu-miR-464 beg:634 end:652 pic:3' ATAGAGTGTCTTATTTGAACCAT 5'& ||| | |||||||| &5' -------CAGGCTCAACTTGGT- 3' Trim16 mmu-miR-148astar beg:1219 end:1237 pic:3' TCAGCCTCACAGAG--TCTTGAAA 5'& || ||| ||||||| &5' --------TGCCTCTAAGAACTT- 3' Trim16 mmu-miR-328 beg:1388 end:1399 pic:3' TGCCTTCCCGTCTCTCCCGGTC 5'& |||||||| &5' -------------GAGGGCCA- 3' Trim16 mmu-miR-872star beg:859 end:872 pic:3' TCCTCCGATGACGTTATCAAGT 5'& | .||||||| &5' -----------GGGATAGTTC- 3' Trim16 mmu-miR-28star beg:1283 end:1300 pic:3' AGGTCGTCGAGTGTTAGATCAC 5'& .||| |||||||| &5' --------TTCATGATCTAGTG 3' Trim16 mmu-miR-582-5p beg:1160 end:1177 pic:3' TCATTGACCAACTTGTTGACAT 5'& ||| |||||||. &5' -----CTGTCT---CAACTGTG 3' Trim16 mmu-miR-466d-5p beg:556 end:572 pic:3' GTACATGTACATGC-GTGTGTGT 5'& ||| ||||||| &5' ---------GTAAACCACACAC- 3' Trim16 mmu-miR-1983 beg:218 end:232 pic:3' TCTTTTGTACGAGGTCCACTC 5'& |||| ||||||| &5' --------TGCT-CAGGTGA- 3' Trim16 mcmv-miR-M95-1-5p beg:1110 end:1122 pic:3' GTTCGCTGTGTTCGGGTGCTGG 5'& ||||||||| &5' -------------CCCACGACC 3' Trim16 mmu-miR-331-3p beg:7 end:26 pic:3' AAGATCCTATCCGGGTCCCCG 5'& |||| ||||||||. &5' -TCTACCT----CCCAGGGGT 3' Trim16 mmu-miR-1982star beg:2 end:20 pic:3' GGAGGGGTCCTG---GGAGGGTT 5'& .|.||||. ||||||| &5' ----TCTAGGATCTACCTCCCA- 3' Trim16 mmu-miR-1943 beg:1439 end:1457 pic:3' AGGTCCACGGGTCTA-GGAGGGAA 5'& | | |||||||| &5' ---------CTGGTCGCCTCCCTT 3' Trim16 mmu-miR-761 beg:67 end:85 pic:3' ACACAGTCAAAGTGGGACGACG 5'& ||| ||||||| &5' -----CAGAAATA-CCTGCTG- 3' Trim16 mmu-miR-1931 beg:655 end:678 pic:3' CGGTAGCGTGGTCGGGAACGTA 5'& ||| |.|||||| .|. |||| &5' GCC-TTGCACCA-TCTGAGCAT 3' Trim16 mmu-miR-1961 beg:0 end:18 pic:3' AAGATTGATGATGGAGT 5'& |||||. ||||||| &5' TTCTAGGATCTACCTC- 3' Trim16 mmu-miR-98 beg:2 end:18 pic:3' TTGTTATGTTGAATGATGGAGT 5'& || .|. ||||||| &5' -----TAGGAT---CTACCTC- 3' Trim16 mmu-let-7e beg:7 end:18 pic:3' TTGATATGTTGGAGGATGGAGT 5'& .||||||| &5' -------------TCTACCTC- 3' Trim16 mmu-miR-300star beg:1654 end:1674 pic:3' TGTTTCCTATTGGAGAGAAGTT 5'& .||||||| | |||||||| &5' GCAAAGGA----C-CTCTTCAA 3' Trim16 mmu-miR-542-3p beg:221 end:239 pic:3' AAAGTCAATAGTTAGACAGTGT 5'& |||| ..| ||||||| &5' --TCAGG---TGA-CTGTCAC- 3' Trim16 mmu-miR-421 beg:961 end:981 pic:3' CGCGGGTTAATTACAGACAACTA 5'& |||.| |||||||| &5' ---CCCGACACC---CTGTTGAT 3' Trim16 mmu-miR-31star beg:575 end:585 pic:3' CTACCGTTATACAACCGTATCGT 5'& ||||||| &5' ---------------GCATAGC- 3' Trim16 mmu-miR-1981 beg:1011 end:1029 pic:3' CGGTGCAGATTCGGG---TCGGAAATG 5'& || ||||||||. &5' ------------CCATCAAGCCTTTAT 3' Trim16 mmu-miR-2183 beg:1424 end:1442 pic:3' TCCTCCAGTCCCCAAGTT 5'& | ||| || ||||||| &5' -GCAGGGCA-GGGTTCA- 3' Trim16 mmu-miR-1933-3p beg:101 end:119 pic:3' TATCAGTGTGACTA--CCAGGACC 5'& |||| ||||||| &5' --------ACTGTGTGGGTCCTG- 3' Trim16 mmu-miR-7a beg:1913 end:1931 pic:3' TGTTGTTTTAGTGATCAGAAGGT 5'& ||||| || |||||||| &5' ------AAATC-CT-GTCTTCCA 3' Trim16 mmu-miR-7b beg:1913 end:1931 pic:3' TGTTGTTTTAGTGTTCAGAAGGT 5'& ||||| | |||||||| &5' ------AAATC-CT-GTCTTCCA 3' Trim16 mmu-miR-802 beg:1374 end:1385 pic:3' TTCCTACTTAGAAACAATGACT 5'& |||||||| &5' --------------GTTACTGA 3' Trim16 mmu-miR-495 beg:906 end:926 pic:3' TTCTTCACG---TGGTACAAACAAA 5'& || .|| ||||||||| &5' -------GCTATGCC-TGTTTGTTT 3' Trim16 mmu-miR-1192 beg:913 end:928 pic:3' TTAAACCAGACAAACAAACAAA 5'& |||||||||||| &5' --------CTGTTTGTTTGT-- 3' Trim16 mcmv-miR-m01-1 beg:1581 end:1600 pic:3' GGCAAGCTG---CAATAAGAGGAGA 5'& ||| ||| ||||.||| &5' ------GACTCAGTTC-TCTCTTCT 3' Trim16 mcmv-miR-m01-2 beg:343 end:366 pic:3' TGGCAAGGTTGGGCTAAGAGAAG 5'& ||||. .| . |||||||. &5' --CGTTTGGAGTGCTTTCTCTTT 3' Trim16 mcmv-miR-m01-2 beg:1748 end:1770 pic:3' TGGCAAGGTTGGGCT--AAGAGAAG 5'& || .||| ||||.||| &5' ------CCTGCCCTTTCTTCTTTTC 3' Trim16 mcmv-miR-m108-2-5p.1 beg:214 end:236 pic:3' GCCACGAGCGCAGCTCACTGGCG 5'& || .|| || |||||.|. &5' ---TGTCTGC-TCAGGTGACTGT 3' Trim16 mcmv-miR-m22-1 beg:868 end:888 pic:3' ACCGGAG-CCATGCCTGCCCCTT 5'& |||| ||||. .||||| &5' ---CCTCAGGTATT--TGGGGA- 3' Trim16 mcmv-miR-m59-1 beg:800 end:820 pic:3' GACTGCCAGCTCCGT-GACGATT 5'& ||| ||||||| &5' ------GTCATCCTCTCTGCTAA 3' Trim16 mghv-miR-M1-3 beg:511 end:531 pic:3' TTCGCGTTGAGGACGAGTGGAG 5'& || ||||.||||| &5' -----CATGTTATGCTTACCTC 3' Trim16 mghv-miR-M1-3 beg:880 end:901 pic:3' TTCGC-GTTGAGGACGAGTGGAG 5'& .| | ||.| |.||||||| &5' -GGGGACAGC----GTTCACCTC 3' Trim16 mghv-miR-M1-3 beg:943 end:962 pic:3' TTCGCGTTGAGGACGAGTGGAG 5'& ||.|. | |||||.|| &5' ----GCGATGA-T-CTCACTTC 3' Trim16 mghv-miR-M1-5 beg:1633 end:1651 pic:3' CTCTGCTGGGCTAGAGTTGAGA 5'& |||. ||||.||| &5' ------ACCTATGCTCAGCTC- 3' Trim16 mghv-miR-M1-6 beg:179 end:203 pic:3' TTTTGGT--GGAGTGTGTCAAAGT 5'& |||.|| |||||||. ||| &5' AAAGCCTCTCCTCACATC--TTC- 3' Trim16 mghv-miR-M1-6 beg:731 end:751 pic:3' TTTTGGTGGAGTG-TGTCAAAGT 5'& || | ||. |.|||||. &5' -----CAGCACATGATAGTTTT- 3' Trim16 mghv-miR-M1-7-5p beg:1025 end:1041 pic:3' TCCAATGGCGTGGAGGTGGAAA 5'& .|||| |||.||| &5' -------TGCACA-CCATCTT- 3' Trim16 mmu-let-7a beg:509 end:532 pic:3' TTGATATGTTGGATG-ATGGAGT 5'& .||| |.. |.| ||||||| &5' -GCTACATGTTATGCTTACCTCA 3' Trim16 mmu-let-7b beg:511 end:532 pic:3' TTGGTGTGTTGGATG-ATGGAGT 5'& .|||.. |.| ||||||| &5' ---TACATGTTATGCTTACCTCA 3' Trim16 mmu-let-7c beg:511 end:532 pic:3' TTGGTATGTTGG--ATG-ATGGAGT 5'& |||| |.| ||||||| &5' -----TACATGTTATGCTTACCTCA 3' Trim16 mmu-let-7d beg:0 end:18 pic:3' TTGATACGTTGGAT----GATGGAGA 5'& .||| ||||||| &5' ----------TCTAGGATCTACCTC- 3' Trim16 mmu-let-7d beg:1206 end:1229 pic:3' TTGATACGTTGGATGATGGAGA 5'& .||| || |.|| .|.||||| &5' GACTCCGC-ATCT-TTGCCTCT 3' Trim16 mmu-let-7e beg:1236 end:1257 pic:3' TTGATATGTT-GGAGGATGGAGT 5'& |||| || |||.|.|| &5' ----ATACTTTCCACCTGCTTC- 3' Trim16 mmu-let-7e beg:120 end:141 pic:3' TTGATATGTTGGAGGATGGAGT 5'& |||| || |||.|.|| &5' AACTTTC---CCGCCTGCTTC- 3' Trim16 mmu-let-7f beg:515 end:532 pic:3' TTGATATGTTAGATGATGGAGT 5'& .|||.| .||||||| &5' --TTATGC------TTACCTCA 3' Trim16 mmu-let-7g beg:510 end:532 pic:3' TTGACATGTTTG--ATG-ATGGAGT 5'& |||| |.| ||||||| &5' -----TACATGTTATGCTTACCTCA 3' Trim16 mmu-let-7g beg:1212 end:1228 pic:3' TTGACATGTTTGATGATGGAGT 5'& .|| || .|.|||| &5' ------GCAT-CT-TTGCCTC- 3' Trim16 mmu-let-7i beg:511 end:532 pic:3' TTGTCGTGTTTGATG-ATGGAGT 5'& ||.. |.| ||||||| &5' -----CATGTTATGCTTACCTCA 3' Trim16 mmu-let-7istar beg:692 end:718 pic:3' TCGTTC-CGTCATCGAACG-CGTC 5'& ||||. |||| ||| || |||| &5' AGCAGCAGCAGCAGCA-GCGGCAG 3' Trim16 mmu-miR-1 beg:584 end:604 pic:3' TATGTATGAAGAAA-TGTAAGGT 5'& ||| |||| .|||||| &5' --ACAG---TCTTGAGCATTCC- 3' Trim16 mmu-miR-1188 beg:555 end:574 pic:3' AGGACCGGGTTGGAGTGTGGT 5'& ||. |||| |||||.| &5' ----GGTA-AACCACACACTA 3' Trim16 mmu-miR-1188 beg:1018 end:1037 pic:3' AGGACCGGGTTGGAGTGTGGT 5'& |||. ||||||| &5' -----GCCTTTATGCACACCA 3' Trim16 mmu-miR-1188 beg:182 end:200 pic:3' AGGACCGGGTTGGAGTGTGGT 5'& |||. |||||||.| &5' -----GCCTCTCCTCACATC- 3' Trim16 mmu-miR-1188 beg:643 end:669 pic:3' AGGACCG---GGTTGGAGTGTGGT 5'& |.|||. |||.||| ||||| &5' -CTTGGTCATCCAGCCTTGCACCA 3' Trim16 mmu-miR-1198 beg:1851 end:1871 pic:3' GGTTCGGTCGGTCCTTGTGTAT 5'& |||||. |||||.||| &5' CCAAGTAA-----GAACATATA 3' Trim16 mmu-miR-1199 beg:1569 end:1591 pic:3' GGCGCGCTGGCC-CTGAGTCT 5'& ||. .|.|| ||||||| &5' -CGTCTGGCCTCAGACTCAG- 3' Trim16 mmu-miR-122 beg:1895 end:1917 pic:3' GTTTGTGGTAACAG---TGTGAGGT 5'& ..||||| |||||||| &5' ------TTATTGTAAGAACACTCCA 3' Trim16 mmu-miR-122 beg:330 end:340 pic:3' GTTTGTGGTAACAGTGTGAGGT 5'& |||||||. &5' -------------CACACTCT- 3' Trim16 mmu-miR-1224 beg:950 end:972 pic:3' GAG-GTGGAGGGGTCAGGA-GTG 5'& || |||.||||| || ||| &5' -TCTCACTTCCCC---CCGACAC 3' Trim16 mmu-miR-125a-3p beg:1649 end:1672 pic:3' CCGAGG-G-TTCTTGGAGTGGACA 5'& ||||| | |||.||||| .| &5' -GCTCCGCAAAGGACCTCTTC--- 3' Trim16 mmu-miR-125b-3p beg:12 end:34 pic:3' TCGAGGGTTCTCG--GATTGGGCA 5'& ||||||.|.|. |||||. &5' --CTCCCAGGGGTTGCTAACT--- 3' Trim16 mmu-miR-135b beg:409 end:433 pic:3' AGTGTA--TCCTTACTTTTCGGTAT 5'& ||||| .||.|||. .|||| &5' -CACATTAGGGGATGGT-GGCCA-- 3' Trim16 mmu-miR-145 beg:17 end:47 pic:3' TCCCTAAG----GACCCTTTTGACCTG 5'& ||||.|| ||| || ||||||.| &5' AGGGGTTGCTAACTGTGACAACTGGGC 3' Trim16 mmu-miR-146a beg:137 end:155 pic:3' TTGGGTACCTTAAGTCAAGAGT 5'& |.|| || |||||||. &5' --CTCAA-GA---CAGTTCTT- 3' Trim16 mmu-miR-146a beg:1574 end:1596 pic:3' TTGGGTACCTTAAGTCAAGAGT 5'& ..||. || ||||||||| &5' GGCCTCA-GAC-TCAGTTCTC- 3' Trim16 mmu-miR-146b beg:133 end:155 pic:3' TCGGATACCTTAAGTCAAGAGT 5'& ||.| || |||||||. &5' -GCTTCTC-AAGACAGTTCTT- 3' Trim16 mmu-miR-146b beg:1574 end:1596 pic:3' TCGGATACCTTAAGTCAAGAGT 5'& .|||| || ||||||||| &5' GGCCTCA-GAC-TCAGTTCTC- 3' Trim16 mmu-miR-148a beg:1263 end:1280 pic:3' TGTTTCAAGACATCACGTGACT 5'& ||| |||||||| &5' --------CTGCCCTGCACTGA 3' Trim16 mmu-miR-148b beg:1263 end:1280 pic:3' TGTTTCAAGACACTACGTGACT 5'& ||| |||||||| &5' --------CTGCCCTGCACTGA 3' Trim16 mmu-miR-150star beg:619 end:640 pic:3' GATAGGGGGTCCGGACATGGTC 5'& |.. | || |||.|||| &5' ---TTTTTCT-GCATGTGCCAG 3' Trim16 mmu-miR-152 beg:1285 end:1305 pic:3' GGTTCAAGACAGTACGTGACT 5'& || | ||| .||||.|| &5' -CATGATCTA--GTGCATTG- 3' Trim16 mmu-miR-152 beg:1263 end:1280 pic:3' GGTTCAAGACAGTACGTGACT 5'& ||| | |||||||| &5' -------CTGCCCTGCACTGA 3' Trim16 mmu-miR-152 beg:222 end:245 pic:3' GGTTCAA-GACAGTA-C-GTGACT 5'& ||.|| |||||| | ||. &5' -CAGGTGACTGTCACCGTCAT--- 3' Trim16 mmu-miR-15astar beg:1818 end:1838 pic:3' ACTCCGTCGTGTCATACCGGAC 5'& || ||||.||||.| &5' ---GGAATT-CAGTGTGGCTT- 3' Trim16 mmu-miR-16star beg:727 end:752 pic:3' AGTCGTCGTGT-CAGTTATGACC 5'& ||||||||||| | .|.| .|| &5' TCAGCAGCACATGATAGTTTTG- 3' Trim16 mmu-miR-16star beg:697 end:719 pic:3' AGTCGTCGT-GTCAGTTATGACC 5'& |||||||| ||| | .| || &5' -CAGCAGCAGCAG-CG--GCAGG 3' Trim16 mmu-miR-1839-3p beg:96 end:116 pic:3' CGACAACCATCTATT---CATCCAGA 5'& |||| ||.|||| &5' --------TAGAAACTGTGTGGGTC- 3' Trim16 mmu-miR-1839-5p beg:0 end:17 pic:3' GTTCTGGACAAGAT---AGATGGAA 5'& ||||| ||||||| &5' ---------TTCTAGGATCTACCT- 3' Trim16 mmu-miR-185 beg:1469 end:1494 pic:3' AGTC-CTTGACGGAAAGAGAGGT 5'& ||| ||.|| . ||||||.| &5' TCAAAGAGCTTTTCTTCTCTTC- 3' Trim16 mmu-miR-185 beg:1579 end:1599 pic:3' AGTCCTTGACGGAAAGAGAGGT 5'& |||| ||| | |||||||. &5' TCAG--ACT-CAGTTCTCTCT- 3' Trim16 mmu-miR-185 beg:1746 end:1765 pic:3' AGTCCTTGACGGAAAGAGAGGT 5'& || ||||| |.|||.| &5' ---GGC-CTGCCC-TTTCTTC- 3' Trim16 mmu-miR-1894-3p beg:1484 end:1506 pic:3' GAGGGAAGTGGGAGAGGGAACG 5'& ||.|||| |..|.| ||| &5' -TCTCTTCTCTTTTTTTCTT-- 3' Trim16 mmu-miR-1897-5p beg:229 end:250 pic:3' GGGGGAGAAAGAGGTAGGTTTC 5'& |. || .||||||.| &5' --CTGTCACCG-TCATCCAGA- 3' Trim16 mmu-miR-1897-5p beg:1589 end:1613 pic:3' GGGGGAGAAAGAGGT--AGGTTTC 5'& .|.||| ||||. |||||| &5' -TCTCTC-TTCTTAGCTTCCAAA- 3' Trim16 mmu-miR-18astar beg:1415 end:1436 pic:3' GTCTTCCTCGTGAATCCCGTCA 5'& .|||| | | ||||||| &5' TAGAACT-GTGC--AGGGCAG- 3' Trim16 mmu-miR-18astar beg:464 end:478 pic:3' GTCTTCCTCGTGAATCCCGTCA 5'& |. .|||||| &5' ----------ATGGGGGGCAG- 3' Trim16 mmu-miR-1904 beg:1662 end:1682 pic:3' GGAGGGAGGTCTCCTCGTCTTG 5'& ||||. .|||||| &5' ----CCTCTTCAATGGCAGAA- 3' Trim16 mmu-miR-1927 beg:4 end:27 pic:3' AGTCAGGGATTGTAGGTCTCCAG 5'& .|| .||| | ||||.|||. &5' -TAGGATCTACCTCCCAGGGGTT 3' Trim16 mmu-miR-1928 beg:1817 end:1837 pic:3' CTCGACC----GTTACATCGA 5'& ||| ||.|||.||| &5' ----TGGAATTCAGTGTGGCT 3' Trim16 mmu-miR-1931 beg:144 end:159 pic:3' CGGTAGCGTGGTCGGGAACGTA 5'& |||..||||||| &5' ----------CAGTTCTTGCAT 3' Trim16 mmu-miR-1933-5p beg:1377 end:1403 pic:3' TTTGATTCTGG--CTTGTGGTACTGA 5'& |||.||||. ||. .||| || &5' --ACTGAGACTATGAGGGCCAACAC- 3' Trim16 mmu-miR-1934 beg:415 end:443 pic:3' TCTCCTGCT-TC-GTCCC-CTGGTCT 5'& ||.|||.|. .| |||| | ||| &5' AGGGGATGGTGGCCAGGTTGGTCAG- 3' Trim16 mmu-miR-1937a beg:467 end:488 pic:3' ACCCCCGAGC-AGGCCCTAA 5'& |||||| | ||.|||||| &5' -GGGGGCA-GATCTGGGATT 3' Trim16 mmu-miR-1937c beg:467 end:487 pic:3' ACCCCCGAGAAGGCCCTA 5'& |||||| ||.||||| &5' -GGGGGCAGATCTGGGAT 3' Trim16 mmu-miR-1940 beg:1295 end:1317 pic:3' TTGACGAGGTGGAAGAGTCAGGAGGTA 5'& ||| . || |||| |.|||| &5' ---TGCATTGCC-TCTC---CTTCCA- 3' Trim16 mmu-miR-1941-5p beg:180 end:204 pic:3' TTCGGAGACATGGTCGTAGAGGGA 5'& |||||||| .|| |||||.|. &5' AAGCCTCTCC-TCA-CATCTTCT- 3' Trim16 mmu-miR-1942 beg:653 end:674 pic:3' GTTGGTCTACTTCTGTAGACT 5'& ||.|| || ||||||| &5' CAGCCT--TGCAC-CATCTGA 3' Trim16 mmu-miR-1944 beg:271 end:294 pic:3' TTAGTCTTGAACTGTAAGTCGTGTCTC 5'& || ||| ||| ||||||.| &5' ---CATAACAAGACT----GCACAGGG 3' Trim16 mmu-miR-1948 beg:1053 end:1067 pic:3' GACATGCTCACGAGA-CGGATTT 5'& ||| || ||||.| &5' ---------TGCCCTAGCCTGA- 3' Trim16 mmu-miR-1950 beg:146 end:168 pic:3' ACTGGTATAGGAAT---C-TACGTCT 5'& .|.|||. | ||||||| &5' -------GTTCTTGCATGAATGCAGA 3' Trim16 mmu-miR-195 beg:1170 end:1184 pic:3' CGGTTATAAAGACACGACGAT 5'& | ||||.|||| &5' ---------TGTGTGTTGCT- 3' Trim16 mmu-miR-1953 beg:108 end:132 pic:3' GTCTTCGGACT--CTTGAAAGGGT 5'& |.. ||||| |||||||||| &5' --GGGTCCTGAATGAACTTTCCC- 3' Trim16 mmu-miR-1953 beg:1441 end:1462 pic:3' GTCTTCGGACTCTTGAAAGGGT 5'& .| |||| |||||||| &5' -GGTCGCCTCC---CTTTCCCA 3' Trim16 mmu-miR-1953 beg:1746 end:1764 pic:3' GTCTTCGGACTCTTGAAAGGGT 5'& .||||| |||||.. &5' ----GGCCTGCC--CTTTCTT- 3' Trim16 mmu-miR-1953 beg:1099 end:1117 pic:3' GTCTTCGGACTCTTGAAAGGGT 5'& || | .||||||| &5' ------CCGT-GTCTTTTCCCA 3' Trim16 mmu-miR-1955 beg:1540 end:1558 pic:3' TTTTCGACGTCACGTAGGACCCTGA 5'& |||||| |||||||. &5' --AAGCTGG-------CCTGGGAT- 3' Trim16 mmu-miR-1955 beg:465 end:487 pic:3' TTTTCGACGTCACGTA-GGACCCTGA 5'& || .| ||| .||||||.| &5' ------TGGGGGGCAGATCTGGGATT 3' Trim16 mmu-miR-1958 beg:1744 end:1771 pic:3' TGAAT-GACG---AAGGTGAAAGGAT 5'& || |||| |||. ||||.|| &5' -CTGGCCTGCCCTTTCTTCTTTTCT- 3' Trim16 mmu-miR-1958 beg:1487 end:1510 pic:3' TGAATGACGAAGGT--GAAAGGAT 5'& ||| || |||.. ||||.|| &5' -CTT-CT-CTTTTTTTCTTTTCT- 3' Trim16 mmu-miR-1959 beg:1268 end:1289 pic:3' GAGGTGACTCGATGTAGGGG 5'& || ||||||| ||| | | &5' CTGCACTGAGATAC-TTTC- 3' Trim16 mmu-miR-1961 beg:518 end:532 pic:3' AAGATTGATG-ATGGAGT 5'& |.| ||||||| &5' -------TGCTTACCTCA 3' Trim16 mmu-miR-1962 beg:643 end:663 pic:3' TACACAGGGTCAC--GGTCGGAGA 5'& |. || |||||||. &5' ------CTTGGTCATCCAGCCTT- 3' Trim16 mmu-miR-1967 beg:1101 end:1123 pic:3' CGTAGAAGAGGGGTCCTAGGAGT 5'& |..||||.|||| || ||| &5' GTGTCTTTTCCCAC-GA-CCT-- 3' Trim16 mmu-miR-1967 beg:249 end:271 pic:3' CGTAGAAGAGGGG---TCCTAGGAGT 5'& |.||| .|||||.||| &5' ------TTTCCAACTAGGGATCTTCA 3' Trim16 mmu-miR-196a beg:1623 end:1641 pic:3' GGGTTGTTGTACTTTGATGGAT 5'& |.|||| |.||||||| &5' ------AGCATG-AGCTACCTA 3' Trim16 mmu-miR-196astar beg:480 end:503 pic:3' AGTCCGTCAA--AGAACAACGGCT 5'& .|| || |||||..|| &5' --GGGATTCAAGTC-TGTTGTTGA 3' Trim16 mmu-miR-196b beg:1623 end:1641 pic:3' GGGTTGTTGTCCTTTGATGGAT 5'& |.|| .|.||||||| &5' ------AGCAT-GAGCTACCTA 3' Trim16 mmu-miR-1970 beg:677 end:696 pic:3' GTTTCGGA--TAGGGGTCACTGTGT 5'& ||| ||||| ||||||| &5' ----GCCCTCATCCC---TGACACA 3' Trim16 mmu-miR-1970 beg:1657 end:1681 pic:3' GTTTC-GGATAGGGGTCACTGTGT 5'& ||.| || ||..|| ||.|| | &5' -AAGGACC--TCTTCAATGGCAGA 3' Trim16 mmu-miR-1971 beg:1008 end:1029 pic:3' AGAGTCGGG---TCGGAAATG 5'& || || ||||||||. &5' ---CATCCATCAAGCCTTTAT 3' Trim16 mmu-miR-208a beg:1769 end:1789 pic:3' TGTTCGAAAAACGAGCAGAATA 5'& .||||| .|.||||||| &5' -----TTTTTTTTTTGTCTTAT 3' Trim16 mmu-miR-208b beg:1769 end:1789 pic:3' TGTTTGGAAAACAAGCAGAATA 5'& ..|||| ||.||||||| &5' -----TTTTTTTTTTGTCTTAT 3' Trim16 mmu-miR-20a beg:1263 end:1288 pic:3' GAT-GGACGTGATATTC-GTGAAAT 5'& ||. |||||||| .|| .||||| &5' CTGCCCTGCACT--GAGATACTTT- 3' Trim16 mmu-miR-20astar beg:145 end:167 pic:3' GAAATTCACGAGCA---TTACGTCA 5'& ||| ||.| ||||||| &5' -----AGTTCTTGCATGAATGCAG- 3' Trim16 mmu-miR-20b beg:1263 end:1288 pic:3' GAT-GGACGTGATACTC-GTGAAAC 5'& ||. ||||||| |||| .||||| &5' CTGCCCTGCAC--TGAGATACTTT- 3' Trim16 mmu-miR-2134 beg:130 end:148 pic:3' CGTGGGGCAAAGGGTTCTG 5'& ||.| |||.|||||| &5' ----CCTGCTTCTCAAGAC 3' Trim16 mmu-miR-2135 beg:1649 end:1670 pic:3' CAAAGCCGGGGT----TCTGGAGA 5'& ||.||. .||||||| &5' ------GCTCCGCAAAGGACCTCT 3' Trim16 mmu-miR-2135 beg:817 end:835 pic:3' CAAAGCCGG-GGTTCTGGAGA 5'& ||.| || ||||.|| &5' -----GGTCACCCAGACTTC- 3' Trim16 mmu-miR-2138 beg:1738 end:1760 pic:3' TAAGGCGGTTCGGGCAAGGGAA 5'& .||.| || .|||.| ||||| &5' GTTTC-CCTGGCCTG--CCCTT 3' Trim16 mmu-miR-2140 beg:1262 end:1278 pic:3' TGGTGGTTCTAGACGTGGA 5'& || || ||||||. &5' ACTGCC-----CTGCACT- 3' Trim16 mmu-miR-2140 beg:269 end:290 pic:3' TGGTG--GTTCTAGACGTGGA 5'& ||||. ||||| |||||| &5' ACCATAACAAGA-CTGCAC-- 3' Trim16 mmu-miR-2141 beg:1475 end:1495 pic:3' TTGAAAAGACTGTGGAGGA 5'& |.||||||| | |.||. &5' AGCTTTTCTT-CTCTTCT- 3' Trim16 mmu-miR-2141 beg:941 end:963 pic:3' TTGAAAAGACT--------GTGGAGGA 5'& ||||| |||.||| &5' -----TTCTGCGATGATCTCACTTCC- 3' Trim16 mmu-miR-2141 beg:888 end:902 pic:3' TTGAAAAGACTGTGGAGGA 5'& | ||||||. &5' -------CGTTCACCTCT- 3' Trim16 mmu-miR-2141 beg:442 end:462 pic:3' TTGAAAAGACT-GTGGAGGA 5'& ||||| ||||. |||| | &5' AACTTGTCTGGTCACC-C-- 3' Trim16 mmu-miR-216a beg:466 end:488 pic:3' AGTGTCAACGGTC--GACTCTAAT 5'& |..| | ||| |||.|||| &5' --ATGGGGGGCAGATCTGGGATT- 3' Trim16 mmu-miR-218 beg:172 end:183 pic:3' TGTACCAATCTAGTTCGTGTT 5'& |.|||||| &5' -------------AGGCACAA 3' Trim16 mmu-miR-21star beg:483 end:502 pic:3' CTGTCGGGTAGCTGACGACAAC 5'& ..|| | |||.||||| &5' -----TTCAA-GTCTGTTGTTG 3' Trim16 mmu-miR-26b beg:1185 end:1203 pic:3' TGGATAGGACTTAATGAACTT 5'& ||.|||.. |||||| &5' ACTTATTTG-----ACTTGA- 3' Trim16 mmu-miR-27a beg:18 end:38 pic:3' CGCCTTGAATCGG-TGACACTT 5'& || .| ||. ||||||| &5' --GGGGTT--GCTAACTGTGA- 3' Trim16 mmu-miR-27b beg:16 end:38 pic:3' CGTCTTGAATCGG-TGACACTT 5'& |||.. || ||. ||||||| &5' -CAGGGGTT-GCTAACTGTGA- 3' Trim16 mmu-miR-2861 beg:624 end:644 pic:3' GGCGGGCGGCGGTCCGGGG 5'& |.|| .| .|||||||.| &5' CTGCATG-TGCCAGGCTC- 3' Trim16 mmu-miR-28star beg:435 end:457 pic:3' AGGTC-GTCGAGTGT-TAGATCAC 5'& .| ||||| || .|||.|| &5' ---GGTCAGCTAACTTGTCTGGT- 3' Trim16 mmu-miR-299star beg:545 end:567 pic:3' TACATAC--AC-CCTGCCATTTGGT 5'& |||| || || ||||||||| &5' ---TATGCCTGAGG--GGTAAACCA 3' Trim16 mmu-miR-300star beg:254 end:272 pic:3' TGTTTCCTATTGGAGAGAAGTT 5'& || |.||| ||||||| &5' ACTAGGGA-------TCTTCAA 3' Trim16 mmu-miR-302c beg:1376 end:1398 pic:3' GGTGACTTTG-TACCTTCGTGAA 5'& .|||||.|| ||| .|| | &5' -TACTGAGACTATGAGGGC-C-- 3' Trim16 mmu-miR-3072 beg:466 end:476 pic:3' TCTTCCGAAGGACCTCCCCCGT 5'& .||||||| &5' --------------GGGGGGCA 3' Trim16 mmu-miR-30a beg:373 end:398 pic:3' GAAGGTCAGCTCC---TACAAATGT 5'& ||. .|.|| ||||||||| &5' --TCTTTATGGGGTAAATGTTTACA 3' Trim16 mmu-miR-30b beg:378 end:398 pic:3' TCGACTCACATCCTACAAATGT 5'& ||.| ||| ||||||||| &5' ---TGGG-GTAA-ATGTTTACA 3' Trim16 mmu-miR-30c beg:379 end:398 pic:3' CGACTCTCACATCCTACAAATGT 5'& |.| ||| ||||||||| &5' -----GGG-GTAA-ATGTTTACA 3' Trim16 mmu-miR-30c-1star beg:1334 end:1357 pic:3' CCTCATTTGTTGGGAGAGGGTC 5'& |||| |||..||.||||.|| &5' -GAGTCAACGGCCTTCTCTCA- 3' Trim16 mmu-miR-30c-1star beg:1441 end:1462 pic:3' CCTCATTTGTTGGGAGAGGGTC 5'& .|| .| ||||.||||| &5' --GGTC-GCCTCCCTTTCCCA- 3' Trim16 mmu-miR-30c-2star beg:1445 end:1462 pic:3' TCTCATTTGTCGGA---AGAGGGTC 5'& |||| |.||||| &5' ----------GCCTCCCTTTCCCA- 3' Trim16 mmu-miR-30c-2star beg:1103 end:1117 pic:3' TCTCATTTGTCGGAAGAGGGTC 5'& |.|||.||||| &5' ----------GTCTTTTCCCA- 3' Trim16 mmu-miR-30c-2star beg:1333 end:1357 pic:3' TCTCATTTGTCGGAAGAGGGTC 5'& ||||| |||.||||||||.|| &5' AGAGTCAACGGCCTTCTCTCA- 3' Trim16 mmu-miR-30d beg:378 end:398 pic:3' GAAGGTCAGCCCC---TACAAATGT 5'& .|||| ||||||||| &5' --------TGGGGTAAATGTTTACA 3' Trim16 mmu-miR-30e beg:379 end:398 pic:3' GAAGGTCAGTTCC---TACAAATGT 5'& ..|| ||||||||| &5' ---------GGGGTAAATGTTTACA 3' Trim16 mmu-miR-30estar beg:1268 end:1282 pic:3' CGACATTTGTAGGC-TGACTTTC 5'& |.| |||||.| &5' -----------CTGCACTGAGA- 3' Trim16 mmu-miR-31 beg:834 end:858 pic:3' GTCGATACGGTCGT-AGAACGGA 5'& .| ||.| ||||||| &5' -GGACTTGTCTATTTTCTTGCC- 3' Trim16 mmu-miR-322 beg:1163 end:1184 pic:3' AGGTTTTGTACTTAACGACGAC 5'& .| ||| || ||.|||| &5' -TCTCAAC-TGTG-TGTTGCT- 3' Trim16 mmu-miR-327 beg:1344 end:1360 pic:3' TAGGAGTACGGGGAGTTCA 5'& |||. |.||||||| &5' --CCTT----CTCTCAAGT 3' Trim16 mmu-miR-327 beg:587 end:611 pic:3' TAGGA---GTACGGGGAGTTCA 5'& .||. ||| ||.||.||| &5' GTCTTGAGCATTCCTCTTAAG- 3' Trim16 mmu-miR-339-5p beg:1420 end:1438 pic:3' GCACTCGAGGAC-C-TCCTGTCCCT 5'& ||| | |||.||||| &5' ---------CTGTGCAGGGCAGGG- 3' Trim16 mmu-miR-342-3p beg:91 end:114 pic:3' TGCCCACG-CTAAAGACACACTCT 5'& || || |||||||.| &5' --GGCTTTAGAAA-CTGTGTGGG- 3' Trim16 mmu-miR-342-5p beg:1079 end:1103 pic:3' GAGTTAGTGTCTATCGTGGGGA 5'& ||. |||||| ||| .||..| &5' CTTTATCACAAATATTACTTC- 3' Trim16 mmu-miR-3471 beg:1034 end:1053 pic:3' TTACGGAATGTCAACCTAGAGT 5'& .|||| |||||.|| &5' ----TCTTAAAA-TGGATTTC- 3' Trim16 mmu-miR-3471 beg:251 end:269 pic:3' TTACGGAATGTCAACCTAGAGT 5'& || || ||||||. &5' ----CCA-ACTAG-GGATCTT- 3' Trim16 mmu-miR-3471 beg:942 end:958 pic:3' TTACGGAATGTCAACCTAGAGT 5'& |.|. ||||||| &5' -------TGCGAT--GATCTCA 3' Trim16 mmu-miR-3473 beg:1583 end:1601 pic:3' CCGACTCGGTAGAGAGGT 5'& || ||. |||||.| &5' --CTCAGTTCTCTCTTC- 3' Trim16 mmu-miR-3473 beg:1746 end:1765 pic:3' CCGACTCGGTAGAGAGGT 5'& ||| ||| |.|||.| &5' GGCCT-GCCCTTTCTTC- 3' Trim16 mmu-miR-3474 beg:0 end:24 pic:3' CTTAGGTGC-AGA-GGAGGGTCCC 5'& ||.| | ||| |||||||||| &5' ---TCTAGGATCTACCTCCCAGGG 3' Trim16 mmu-miR-34b-5p beg:1249 end:1271 pic:3' TGTTAGTCGATTAAT----GTGACGGA 5'& ||| ||||||| &5' -------GCTTCCTCATGTCACTGCC- 3' Trim16 mmu-miR-34b-5p beg:1286 end:1308 pic:3' TGTTAG-TCGATTAATGTGACGGA 5'& | ||| ||. .||.||||| &5' ATGATCTAGT-----GCATTGCCT 3' Trim16 mmu-miR-34c beg:1249 end:1271 pic:3' CGTTAGTCGATTGAT----GTGACGGA 5'& ||| || ||||||| &5' -------GCTTCCTCATGTCACTGCC- 3' Trim16 mmu-miR-370 beg:1691 end:1712 pic:3' TGGTCCAAGGTG--GGGTCGTCCG 5'& |||. .||||||||. &5' ------TTCTTGGATCCAGCAGGT 3' Trim16 mmu-miR-378 beg:1356 end:1376 pic:3' GGAAGACTGAGGTTCAGGTCA 5'& ||| ||| .|||||| &5' ---TCTAAATCCTGGTCCAG- 3' Trim16 mmu-miR-384-5p beg:378 end:398 pic:3' TGTAACGGATCCTTA--ACAAATGT 5'& |.||. |||||||| &5' --------TGGGGTAAATGTTTACA 3' Trim16 mmu-miR-423-5p beg:1744 end:1761 pic:3' TTTCAGAGCGAGAGACGGGGAGT 5'& || || ||||||.|. &5' -----CTGGC---CTGCCCTTT- 3' Trim16 mmu-miR-431 beg:743 end:763 pic:3' ACGT-ACTGCCGGACGTTCTGT 5'& |. ||| | ||||||. &5' -GTTTTGAA---CAGCAAGAT- 3' Trim16 mmu-miR-448 beg:1012 end:1032 pic:3' TACCCTGTAGGATGT--ATACGTT 5'& |||| .| |||||| &5' ------CATCAAGCCTTTATGCA- 3' Trim16 mmu-miR-449a beg:1249 end:1271 pic:3' TGGTCGATT--GTTATGTGACGGT 5'& ||| || ||||||| &5' ----GCTTCCTCATGTCACTGCC- 3' Trim16 mmu-miR-449b beg:1249 end:1271 pic:3' CGGTCGATTGTTGTGACGGA 5'& ||. || |.. ||||||| &5' GCTTCCTCATGTCACTGCC- 3' Trim16 mmu-miR-449c beg:1249 end:1271 pic:3' GGTCGATCGT-TAC-GTGACGGA 5'& ||| | ||| ||||||| &5' ---GCTTCCTCATGTCACTGCC- 3' Trim16 mmu-miR-450a-3p beg:1899 end:1918 pic:3' TACTTACGTTTC-GTAGGGGTTA 5'& ||.||. || |.|||| &5' -----TGTAAGAACA-CTCCAA- 3' Trim16 mmu-miR-450a-3p beg:1654 end:1675 pic:3' TACTTACGTTTCGT--AGGGGTTA 5'& |||||| | ||..|||| &5' ------GCAAAGGACCTCTTCAAT 3' Trim16 mmu-miR-450b-3p beg:237 end:258 pic:3' TAC-GTACGTTTTACAAGGGTTA 5'& | ||| ||.||| |.|||| &5' --GTCATCCAGAAT--TTCCAA- 3' Trim16 mmu-miR-450b-5p beg:146 end:169 pic:3' ATAAGTCCTTGTATG-ACGTTTT 5'& .||| .|||. ||||.|| &5' -GTTCTT--GCATGAATGCAGAA 3' Trim16 mmu-miR-465a-3p beg:1362 end:1373 pic:3' AGATGAATCTTTCCGGGACTAG 5'& .||||.|| &5' --------------TCCTGGTC 3' Trim16 mmu-miR-465b-3p beg:1362 end:1373 pic:3' AGATGAATCTTTCCGGGACTAG 5'& .||||.|| &5' --------------TCCTGGTC 3' Trim16 mmu-miR-465c-3p beg:1362 end:1373 pic:3' AGATGAATCTTTCCGGGACTAG 5'& .||||.|| &5' --------------TCCTGGTC 3' Trim16 mmu-miR-470 beg:622 end:646 pic:3' TGAGTGGT-CACGGTCA-GGTTCTT 5'& .|| || ||||||| .||| &5' -TTCTGCATGTGCCAGGCTCAA--- 3' Trim16 mmu-miR-484 beg:1057 end:1069 pic:3' TAGCCCTCCCCTGACTCGGACT 5'& || ||||||| &5' ------------CT-AGCCTGA 3' Trim16 mmu-miR-485 beg:644 end:663 pic:3' CTTAAGTAGTGCCGGTCGGAGA 5'& || .|||. |||||||. &5' ---TTGGTCAT--CCAGCCTT- 3' Trim16 mmu-miR-488star beg:439 end:455 pic:3' AACTCTCACGAT--AATAGACCC 5'& |||| ||.||||| &5' --------GCTAACTTGTCTGG- 3' Trim16 mmu-miR-490 beg:417 end:438 pic:3' GTCGTACCTCAGGAGGTCCAAC 5'& .| |||| | |||||||| &5' -GGGATGGTGG---CCAGGTTG 3' Trim16 mmu-miR-496 beg:1601 end:1619 pic:3' CTCTAACCGGTACATTATGAGT 5'& ||. |||.|||| &5' -------GCTTCCAAATGCTCA 3' Trim16 mmu-miR-496 beg:1627 end:1647 pic:3' CTCTAAC-CGGTACATTATGAGT 5'& || ||.| ||.|||| &5' -----TGAGCTACCT-ATGCTCA 3' Trim16 mmu-miR-499 beg:575 end:597 pic:3' TTTGTAGTGACGT-TCAGAATT 5'& .||| .| || ||||||.| &5' --GCATAGCC-CACAGTCTTGA 3' Trim16 mmu-miR-504 beg:1422 end:1440 pic:3' CTATCTCACGTCTGGTCCCAGA 5'& ||||||. ||||||. &5' ------GTGCAGGGCAGGGTT- 3' Trim16 mmu-miR-505 beg:962 end:982 pic:3' TCTTTTGGTCGTTC-ACAACTGC 5'& ||. || ||||||.| &5' ------CCGACACCCTGTTGATG 3' Trim16 mmu-miR-509-5p beg:338 end:356 pic:3' TACTAACGGTGTAAGACCTCAT 5'& ||| |.||||||. &5' -------CCAGCGTTTGGAGTG 3' Trim16 mmu-miR-511 beg:161 end:180 pic:3' ACTCACGTCTCGTT--TTCCGTA 5'& |||||| |||||| &5' ----TGCAGAAACTCTAAGGCA- 3' Trim16 mmu-miR-541 beg:1057 end:1076 pic:3' TCACACTGGTTGTAGTCTTAGGGAA 5'& |.|.| | | |.||||| &5' -------CTAGCCTGA-AGTCCCT- 3' Trim16 mmu-miR-544 beg:149 end:169 pic:3' CTCGAACGATTTTTACGTCTTA 5'& ||||| .||||||||| &5' ---CTTGCAT-GAATGCAGAA- 3' Trim16 mmu-miR-544 beg:1323 end:1341 pic:3' CTCGAACGATTTTTACGTCTTA 5'& |.| ||||||.| &5' ------GTTTCCC-TGCAGAGT 3' Trim16 mmu-miR-592 beg:679 end:696 pic:3' TGTAGTAGCGTATAACTGTGTTA 5'& ||||| | |||||||. &5' ---TCATC-CC---TGACACAG- 3' Trim16 mmu-miR-599 beg:1790 end:1803 pic:3' CAAACTATTTGACTGTGTT 5'& ||.||||||| &5' --------AATTGACACA- 3' Trim16 mmu-miR-599 beg:685 end:696 pic:3' CAAACTATTTGACTGTGTT 5'& ||||||||. &5' ----------CTGACACAG 3' Trim16 mmu-miR-654-5p beg:509 end:529 pic:3' TGTGTACAAGACGTCGAATGGT 5'& .||||||| ||||||| &5' -TACATGTTAT---GCTTACC- 3' Trim16 mmu-miR-665 beg:205 end:225 pic:3' TCCCTGGAGT-CGGAGGACCA 5'& |||| .||| |.|| || &5' AGGG-TCTCCTGTCTGCT--- 3' Trim16 mmu-miR-666-5p beg:896 end:921 pic:3' CCGAGAGTG---TCGACACGGGCGA 5'& |||||.| |||| ||||.|.| &5' --CTCTCGCAGGAGCTATGCCTGTT 3' Trim16 mmu-miR-669e beg:129 end:149 pic:3' TACTTGTACGTGTGTGTTCTGT 5'& .| ||| | ||||||| &5' ----GCCTGCTT-CTCAAGACA 3' Trim16 mmu-miR-678 beg:1366 end:1388 pic:3' GGAGGTCAGGAA-C-GTGGCTCTG 5'& | |||| | .||.||||| &5' ---CTGGTCCAGAGTTACTGAGAC 3' Trim16 mmu-miR-679 beg:572 end:594 pic:3' TGGTTCTCAGTGGAGTGTCAGG 5'& |||. .|| |||||||. &5' ACCGCATA--GCC-CACAGTCT 3' Trim16 mmu-miR-679 beg:812 end:835 pic:3' TGGTTCTCAGTGGAGTGTCAGG 5'& .|.||| |||||| || | |.| &5' GCTAAG-GTCACC-CAGACTTC 3' Trim16 mmu-miR-680 beg:1253 end:1272 pic:3' GGGGGTACAGTCGTCTACGGG 5'& ||.||||||| | ||||| &5' -CCTCATGTCA-C---TGCCC 3' Trim16 mmu-miR-683 beg:702 end:719 pic:3' CTCCTGTGTCGAATGTCGTCC 5'& .|||| .|.||||| &5' ------GCAGCA-GCGGCAGG 3' Trim16 mmu-miR-693-5p beg:1822 end:1837 pic:3' CTTTTGAAAGCCTACACCGAC 5'& ||| .||||||| &5' -------TTCA-GTGTGGCT- 3' Trim16 mmu-miR-693-5p beg:498 end:513 pic:3' CTTTTGAAAGCCTACACCGAC 5'& .|||| ||||||| &5' --GAACT------TGTGGCT- 3' Trim16 mmu-miR-696 beg:581 end:603 pic:3' GGGTGTCG---TTCGTGTGCG 5'& |||||||. .||||. | &5' CCCACAGTCTTGAGCATTC-- 3' Trim16 mmu-miR-702 beg:1063 end:1083 pic:3' CTCGCCCCATTTC-----CCACCCGT 5'& |.||| ||||||| &5' --------TGAAGTCCCTGGTGGGC- 3' Trim16 mmu-miR-704 beg:504 end:520 pic:3' GATCCTCGTCTCG-TGTACAGA 5'& |. .|| ||||||. &5' ------GT--GGCTACATGTT- 3' Trim16 mmu-miR-705 beg:1445 end:1464 pic:3' ACGGGTGGGGTGGAGGGTGG 5'& |||. |||. .||||||. &5' -GCCT-CCCT--TTCCCACT 3' Trim16 mmu-miR-705 beg:943 end:966 pic:3' ACG--GGTGGGGTGGAGGGTGG 5'& || . |.|.|||.|||| || &5' -GCGATGATCTCACTTCCCCCC 3' Trim16 mmu-miR-709 beg:1208 end:1229 pic:3' AGGAGGAC-GGAGACGGAGG 5'& |||| .||.||||||. &5' --CTCCGCATCTTTGCCTCT 3' Trim16 mmu-miR-709 beg:1744 end:1765 pic:3' AGGA--GGACGGAGACGGAGG 5'& ||| |||||| || .||.| &5' -CCTGGCCTGCC-CTTTCTTC 3' Trim16 mmu-miR-710 beg:824 end:844 pic:3' GAGTTGAGAGGGGTTCTGAACC 5'& ||. ||.| .|||||| &5' --CAGA-CTTCAT-GGACTTG- 3' Trim16 mmu-miR-713 beg:1826 end:1846 pic:3' CGACACACGGA--AGTCACGT 5'& ||||| || ||||||. &5' ---GTGTGGCTTTTCAGTGT- 3' Trim16 mmu-miR-713 beg:1169 end:1188 pic:3' CGACACACG--GAAGTCACGT 5'& |||||||. |||.|| &5' -CTGTGTGTTGCTTTAG---- 3' Trim16 mmu-miR-741 beg:1342 end:1357 pic:3' AGATGTATCTTACCGT-AGAGAGT 5'& ||| ||||||| &5' ------------GGCCTTCTCTCA 3' Trim16 mmu-miR-742 beg:1821 end:1840 pic:3' AAATGGGTCGTACCACCGAAAG 5'& |..|||. ||||||||. &5' ---ATTCAGT---GTGGCTTTT 3' Trim16 mmu-miR-742 beg:84 end:100 pic:3' AAATGGGTCGTACCACCGAAAG 5'& .|.| ||||||| &5' -------GGTAGT-TGGCTTT- 3' Trim16 mmu-miR-743a beg:1093 end:1113 pic:3' AGATGAGTCGAACCACAGAAAG 5'& .||||. ||||||||. &5' -TTACTTCC----GTGTCTTTT 3' Trim16 mmu-miR-743b-5p beg:1456 end:1469 pic:3' ACTACCTGTGGTCAGACTTGT 5'& ||| ||||||| &5' ---------CCA--CTGAACA 3' Trim16 mmu-miR-743b-5p beg:660 end:677 pic:3' ACTACCTGTGGTCAGACTTGT 5'& .||||| |||||.|| &5' ------GCACCA-TCTGAGCA 3' Trim16 mmu-miR-743b-5p beg:735 end:756 pic:3' ACTACCTGTG--GTC-AGACTTGT 5'& | |||. .|| |.|||||| &5' ----GCACATGATAGTTTTGAACA 3' Trim16 mmu-miR-744 beg:1259 end:1276 pic:3' ACGACAATCGG-GATCGGGGCGT 5'& |.| || ||||.||| &5' --------GTCACT-GCCCTGCA 3' Trim16 mmu-miR-744star beg:32 end:52 pic:3' TCCAACTCCAATCACCGTTGTC 5'& ||| ||||.||| &5' ----TGACAACTG-GGCAGCAG 3' Trim16 mmu-miR-758 beg:1516 end:1535 pic:3' ATCACCTGGTCC--AGTGTTT 5'& |||. .|| |||||| &5' ----GGATAGGGCTTCACAA- 3' Trim16 mmu-miR-758 beg:1611 end:1628 pic:3' ATCACCTG-GTCCAGTGTTT 5'& .| |||||.||||. &5' ------GCTCAGGTTACAAG 3' Trim16 mmu-miR-758 beg:1073 end:1094 pic:3' ATCACCTGGTCCAGTGTTT 5'& |.||||.|. ||||||| &5' TGGTGGGCTTTATCACAAA 3' Trim16 mmu-miR-762 beg:1048 end:1067 pic:3' CGAGACAGGGC-CGGGGTCGGGG 5'& ||. ||||.||||. &5' ------TCTATTGCCCTAGCCT- 3' Trim16 mmu-miR-764-5p beg:584 end:602 pic:3' TCCTCCTGTAC--ACTCGTGG 5'& ||| ||||||.. &5' ------ACAGTCTTGAGCATT 3' Trim16 mmu-miR-764-5p beg:664 end:678 pic:3' TCCTCCTGTACACTCGTGG 5'& ||| ||||||. &5' -------CATCTGAGCAT- 3' Trim16 mmu-miR-872star beg:352 end:375 pic:3' TCCTCCGAT-----GACGTTATCAAGT 5'& ||| .||. ||||||| &5' -----GCTTTCTCTTTGT--TAGTTCA 3' Trim16 mmu-miR-873 beg:137 end:157 pic:3' TCCTCTGAGTGT--TCAAGGACG 5'& |||| |||||.||| &5' ------CTCAAGACAGTTCTTGC 3' Trim16 mmu-miR-877 beg:977 end:998 pic:3' GGGAC-GCGGT-AGAGGAGATG 5'& || | .|| ||||||.|| &5' ---TGACTTCATTCTCCTTTA- 3' Trim16 mmu-miR-877star beg:872 end:890 pic:3' ACCCTCCTCCCTCTTCTCCTGT 5'& ||| |.||||| &5' -------AGGTATTTGGGGACA 3' Trim16 mmu-miR-879 beg:169 end:191 pic:3' CCGAATCTCGATA-TTCGGAGA 5'& || || || |||||||| &5' --CTAAG-GCACAAAAGCCTCT 3' Trim16 mmu-miR-880 beg:368 end:388 pic:3' AGATGAGTCTCTCCTACCTCAT 5'& .||| ||||.||| &5' ----TTCATCTTT-ATGGGGTA 3' Trim16 mmu-miR-881star beg:1581 end:1599 pic:3' TCTACACTGACAATAGAGAGAC 5'& |||| ||||||| &5' ------GACTCAGTTCTCTCT- 3' Trim16 mmu-miR-882 beg:1587 end:1602 pic:3' TGATTACGCGATTGAGAGAGGA 5'& |.| ||||||.|| &5' --------GTT--CTCTCTTCT 3' Trim16 mmu-miR-882 beg:1476 end:1495 pic:3' TGATTACGCGATT--GAGAGAGGA 5'& ||| .|||||.|| &5' --------GCTTTTCTTCTCTTCT 3' Trim16 mmu-miR-883a-5p beg:1401 end:1420 pic:3' CATTGACGATGAAGAGAGTCGT 5'& ||||| .||||||.| &5' -----TGCTAGC-TTCTCAGTA 3' Trim16 mmu-miR-883b-5p beg:1401 end:1420 pic:3' ACTGACGATGGGTAAGAGTCAT 5'& ||||| |. |||||||| &5' ----TGCTAGCT--TCTCAGTA 3' Trim16 mmu-miR-93star beg:727 end:737 pic:3' GCCCTTCACGATCGAGTCGTCA 5'& ||||||| &5' --------------TCAGCAG- 3' Trim16 mmu-miR-96 beg:625 end:639 pic:3' TCGTTTTTACACGATCACGGTTT 5'& ||| ||||||. &5' ----------TGCATGTGCCAG- 3' Trim16 mmu-miR-96 beg:911 end:933 pic:3' TCGTTTTTACACGATCACGGTTT 5'& || .| ||.| ||||.||. &5' -GCCT--GTTTGTTTGTGCTAAG 3' Trim16 mmu-miR-98 beg:1086 end:1103 pic:3' TTGTTATGTTGAATGATGGAGT 5'& |||| ||.|||.|| &5' ------ACAAA-TATTACTTC- 3' Trim16 mmu-miR-98 beg:518 end:532 pic:3' TTGTTATGTTGAATG-ATGGAGT 5'& |.| ||||||| &5' ------------TGCTTACCTCA 3' Trim16 mmu-miR-9star beg:79 end:101 pic:3' TGAAAGCCAATAGATCGAAATA 5'& .|| .||| .|.|||||| &5' GCTGATGGTAG-TTGGCTTTA- 3' Trim16 mmu-miR-9star beg:1072 end:1088 pic:3' TGAAAGCCAATAGATCGAAATA 5'& .||| .||||||| &5' -----TGGTG----GGCTTTAT 3' Trim16 mmu-miR-433star beg:224 end:242 pic:3' CTTATTACTGTCCGAGTGGCAT 5'& ..|||| | ||||||| &5' ----GGTGACT-G-TCACCGT- 3' Trim16 mmu-miR-1932 beg:1642 end:1661 pic:3' GGCTGGATCGCGACAGGCGTTG 5'& | .| ||| ||||||| &5' -CAGCTCAGC----TCCGCAA- 3' Trim16 mmu-miR-466h beg:1016 end:1035 pic:3' ATGTGTGTTCGT--GTACGTGTGT 5'& ||||| .|||||||| &5' ------CAAGCCTTTATGCACAC- 3' Trim16 mmu-miR-466j beg:1018 end:1035 pic:3' AATGTGTGTACGT--GTACGTGTGT 5'& || .|||||||| &5' ----------GCCTTTATGCACAC- 3'

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Trim16 RAID00060879 mmu-miR-6346 miRNA MIMAT0025089 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID00083208 mmu-miR-328-3p miRNA MIMAT0000565 Trim16 mRNA 94092 Prediction 0.2202 Trim16 RAID00111974 mmu-miR-34c-5p miRNA MIMAT0000381 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID00136764 mmu-miR-466h-5p miRNA MIMAT0004884 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID00175000 mmu-miR-23a-3p miRNA MIMAT0000532 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID00183494 mmu-miR-3087-5p miRNA MIMAT0014895 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID00320271 mmu-miR-6925-5p miRNA MIMAT0027750 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID00368736 mmu-let-7e-5p miRNA MIMAT0000524 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID00386304 mmu-miR-31-5p miRNA MIMAT0000538 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID00482896 mmu-miR-292a-5p miRNA MIMAT0000369 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID00483505 mmu-miR-98-5p miRNA MIMAT0000545 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID00521884 mmu-miR-592-5p miRNA MIMAT0003730 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID00700473 mmu-miR-208b-3p miRNA MIMAT0004939 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID00737062 mmu-miR-7b-5p miRNA MIMAT0000678 Trim16 mRNA 94092 Prediction 0.2202 Trim16 RAID00834159 mmu-miR-449c-5p miRNA MIMAT0003460 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID00876384 mmu-miR-8120 miRNA MIMAT0031426 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID00970205 mmu-miR-30d-5p miRNA MIMAT0000515 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID00977710 mmu-miR-153-3p miRNA MIMAT0000163 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID00996414 mmu-miR-6903-3p miRNA MIMAT0027707 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID01026251 mmu-miR-135a-1-3p miRNA MIMAT0004531 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID01134835 mmu-miR-6950-3p miRNA MIMAT0027801 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID01179396 mmu-miR-148a-3p miRNA MIMAT0000516 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID01183402 mmu-miR-495-3p miRNA MIMAT0003456 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID01212458 mmu-miR-6944-3p miRNA MIMAT0027789 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID01219743 mmu-let-7c-5p miRNA MIMAT0000523 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID01226536 mmu-miR-1192 miRNA MIMAT0005850 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID01226667 mmu-miR-23b-3p miRNA MIMAT0000125 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID01274930 mmu-miR-6903-5p miRNA MIMAT0027706 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID01293532 mmu-miR-742-3p miRNA MIMAT0004237 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID01321042 mmu-miR-30e-5p miRNA MIMAT0000248 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID01335538 mmu-miR-300-5p miRNA MIMAT0004578 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID01351983 mmu-miR-496a-3p miRNA MIMAT0003738 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID01364474 mmu-miR-7025-3p miRNA MIMAT0027955 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID01418471 mmu-let-7a-5p miRNA MIMAT0000521 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID01532044 mmu-let-7i-5p miRNA MIMAT0000122 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID01559121 mmu-miR-599 miRNA MIMAT0012772 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID01781278 mmu-miR-7652-5p miRNA MIMAT0029810 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID01789072 mmu-miR-1258-5p miRNA MIMAT0029904 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID01794521 mmu-miR-8106 miRNA MIMAT0031411 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID01799924 mmu-miR-6395 miRNA MIMAT0025146 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID01847599 mmu-miR-6350 miRNA MIMAT0025093 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID01848114 mmu-miR-370-3p miRNA MIMAT0001095 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID02071394 mmu-miR-761 miRNA MIMAT0003893 Trim16 mRNA 94092 Prediction 0.2202 Trim16 RAID02162601 mmu-miR-449a-5p miRNA MIMAT0001542 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID02223448 mmu-miR-449b miRNA MIMAT0005447 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID02302421 mmu-let-7f-5p miRNA MIMAT0000525 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID02373533 mmu-let-7g-5p miRNA MIMAT0000121 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID02439762 mmu-miR-542-3p miRNA MIMAT0003172 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID02547337 mmu-miR-122-5p miRNA MIMAT0000246 Trim16 mRNA 94092 Prediction 0.2202 Trim16 RAID02599191 mmu-miR-148b-3p miRNA MIMAT0000580 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID02602336 mmu-miR-384-5p miRNA MIMAT0004745 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID02664855 mmu-miR-194-2-3p miRNA MIMAT0017073 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID02684391 mmu-miR-7116-5p miRNA MIMAT0028129 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID02692124 mmu-miR-146b-5p miRNA MIMAT0003475 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID02723234 mmu-miR-383-5p miRNA MIMAT0000748 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID02741688 mmu-miR-883b-5p miRNA MIMAT0004850 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID02765519 mmu-miR-143-3p miRNA MIMAT0000247 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID02804659 mmu-miR-433-3p miRNA MIMAT0001420 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID02816844 mmu-miR-214-3p miRNA MIMAT0000661 Trim16 mRNA 94092 Prediction 0.2202 Trim16 RAID02863990 mmu-miR-7a-5p miRNA MIMAT0000677 Trim16 mRNA 94092 Prediction 0.2202 Trim16 RAID02917298 mmu-miR-6926-5p miRNA MIMAT0027752 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID02968209 mmu-miR-499-5p miRNA MIMAT0003482 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID03063304 mmu-miR-146a-5p miRNA MIMAT0000158 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID03089582 mmu-miR-30c-5p miRNA MIMAT0000514 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID03092305 mmu-miR-7052-5p miRNA MIMAT0028008 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID03099215 mmu-miR-152-3p miRNA MIMAT0000162 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID03219938 mmu-miR-466l-5p miRNA MIMAT0017322 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID03269804 mmu-miR-208a-3p miRNA MIMAT0000520 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID03340359 mmu-let-7b-5p miRNA MIMAT0000522 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID03414862 mmu-miR-30b-5p miRNA MIMAT0000130 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID03460467 mmu-miR-3620-3p miRNA MIMAT0029879 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID03481301 mmu-miR-290a-5p miRNA MIMAT0000366 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID03511769 mmu-miR-34b-5p miRNA MIMAT0000382 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID03606026 mmu-let-7d-5p miRNA MIMAT0000383 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID03650513 mmu-miR-7089-5p miRNA MIMAT0028084 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID03706471 mmu-miR-544-3p miRNA MIMAT0004941 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID03727285 mmu-miR-30a-5p miRNA MIMAT0000128 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID03842298 mmu-miR-7055-5p miRNA MIMAT0028014 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID03901938 mmu-miR-9-5p miRNA MIMAT0000142 Trim16 mRNA 94092 Prediction 0.2202 Trim16 RAID03905632 mmu-miR-125b-2-3p miRNA MIMAT0004529 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID03936706 mmu-miR-5619-3p miRNA MIMAT0022366 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID03939113 mmu-miR-34a-5p miRNA MIMAT0000542 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID03960309 mmu-miR-7212-3p miRNA MIMAT0028393 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID03978872 mmu-miR-7094-3p miRNA MIMAT0028095 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID04041460 mmu-miR-672-3p miRNA MIMAT0017241 Trim16 mRNA 94092 Prediction 0.1828 Trim16 RAID04042122 mmu-miR-450a-5p miRNA MIMAT0001546 Trim16 mRNA 94092 Prediction 0.1828