DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004523 mmu-miR-29b* 217194 Klhl11 auUUGGUGGUAUA-CUUUG-GUCg || | || || ||||| ||| uuAAAAAACAAAUAGAAACUCAGu 2 21 134 157 [mm9:11:100324021-100324044:-] 0.5892 123 0 -13.12 -1.1148 MIMAT0004529 mmu-miR-125b* 217194 Klhl11 uccaggguucuuggACUGAAca |||||| gaaaaguaugucaaUGACUUau 3 9 72 93 [mm9:11:100324085-100324106:-] 0.5892 120 0 -7.94 -0.1081 MIMAT0004531 mmu-miR-135a* 217194 Klhl11 gcggugccgagguuaGGGAUAu |||||| uacuuggacuuauuaCCCUAUa 2 8 98 119 [mm9:11:100324059-100324080:-] 0.5892 120 6 -16.50 -0.3605 MIMAT0000152 mmu-miR-140* 217194 Klhl11 ggcaccaagaugggACACCAu |||||| gaaacucaguucaaUGUGGUa 2 8 148 168 [mm9:11:100324010-100324030:-] 0.5892 120 6 -13.45 -0.2911 MIMAT0004541 mmu-miR-188-3p 217194 Klhl11 acgUUUGGGACG---UACACCCUc ||||:| |: |||||| | uagAAACUCAGUUCAAUGUGGUAa 2 19 146 169 [mm9:11:100324009-100324032:-] 0.5892 125 0 -12.11 -0.1246 MIMAT0004545 mmu-miR-200b* 217194 Klhl11 agguUACGACGGGUCAUUCUAc :||||| : | |||||| uuguGUGCUGGUAAAUAAGAUc 2 19 206 227 [mm9:11:100323951-100323972:-] 0.5905 134 6 -13.01 -0.1021 MIMAT0004583 mmu-miR-130b* 217194 Klhl11 ucaucacguugucccUUUCUCa |||||| aaauaagaucuuauuAAAGAGa 2 8 218 239 [mm9:11:100323939-100323960:-] 0.5905 120 6 -5.49 -0.1187 MIMAT0004619 mmu-miR-200a* 217194 Klhl11 agguCGUGACAGGCCAUUCUAc |::||| : |||||| uuguGUGCUGGUAAAUAAGAUc 2 19 206 227 [mm9:11:100323951-100323972:-] 0.5905 122 6 -11.20 -0.1052 MIMAT0004631 mmu-miR-29a* 217194 Klhl11 gacUUGUGGUUUUCUUU-AGUCa || || || ||||| |||| uaaAAAACAAAUAGAAACUCAGu 2 20 135 157 [mm9:11:100324021-100324043:-] 0.5892 135 0 -12.60 -1.1126 MIMAT0002105 mmu-miR-464 217194 Klhl11 auagagugucuuauuUGAACCau |||||| aaugacuuauuuucuACUUGGac 3 9 84 106 [mm9:11:100324072-100324094:-] 0.5892 120 0 -11.69 -0.2283 MIMAT0003373 mmu-miR-302b* 217194 Klhl11 ucuUUCGUAAGGGUACAAUUUca ||| | | :| |||||| uacAAGAAGU-AUA-GUUAAAaa 3 21 120 140 [mm9:11:100324038-100324058:-] 0.5892 124 0 -5.61 -0.2434 MIMAT0003373 mmu-miR-302b* 217194 Klhl11 ucuuucguaaggguacAAUUUCa |||||| gguaaauaagaucuuaUUAAAGa 2 8 215 237 [mm9:11:100323941-100323963:-] 0.5905 120 6 -7.44 -0.1513 MIMAT0003375 mmu-miR-302c* 217194 Klhl11 cguccAUUGGGGUACAAUUUCg ||| :| | |||||| guaaaUAAGAUCUUAUUAAAGa 2 18 216 237 [mm9:11:100323941-100323962:-] 0.5905 125 6 -8.59 -0.1499 MIMAT0003375 mmu-miR-302c* 217194 Klhl11 cguccauugggGUA-CAAUUUcg :|| |||||| uauacaagaagUAUAGUUAAAaa 3 12 118 140 [mm9:11:100324038-100324060:-] 0.5892 122 0 -5.41 -0.2607 MIMAT0003728 mmu-miR-374* 217194 Klhl11 gaGCCUG-UUACU---AU-UAUGUUgg :|||| || | || |||||| cuUGGACUUAUUACCCUAUAUACAAga 3 21 100 126 [mm9:11:100324052-100324078:-] 0.5892 125 0 -12.30 -0.2341 MIMAT0003740 mmu-miR-674 217194 Klhl11 augUGGUGAGGGUAGAGUCAcg || | | | |||||| aaaACAAAUAGAAACUCAGUuc 3 20 138 159 [mm9:11:100324019-100324040:-] 0.5892 127 0 -8.96 -0.2125 MIMAT0003471 mmu-miR-692 217194 Klhl11 cucacuccgcgAGUUUCUCUa |:||||||| auaagaucuuaUUAAAGAGAa 2 11 220 240 [mm9:11:100323938-100323958:-] 0.5905 146 7 -9.96 -1.1817 MIMAT0003474 mmu-miR-694 217194 Klhl11 gaAGUCCGUUG--UAAAAGuc ||| ::|| |||||| ugUCA-AUGACUUAUUUUCua 3 18 80 99 [mm9:11:100324079-100324098:-] 0.5892 122 0 -5.23 -0.1257 MIMAT0003742 mmu-miR-455 217194 Klhl11 cacauaUACGGGCACCUGACg ||||| ||||||| gcggggAUGCC--UGGACUGu 2 16 47 65 [mm9:11:100324113-100324131:-] 0.5654 152 7 -19.86 -0.3313 MIMAT0003742 mmu-miR-455 217194 Klhl11 cacAUAUACGG-GCACCUGAcg ||| | |: | |||||| acuUAUUUUCUACUUGGACUua 3 19 88 109 [mm9:11:100324069-100324090:-] 0.5892 133 0 -8.34 -0.2568 MIMAT0004210 mmu-miR-804 217194 Klhl11 agguccacuccUUGUUGAGUgu |: |||||| aaaaaacaaauAGAAACUCAgu 3 12 136 157 [mm9:11:100324021-100324042:-] 0.5892 123 0 -7.79 -0.1074 MIMAT0004850 mmu-miR-883b-5p 217194 Klhl11 acugacgauggguaaGAGUCAu |||||| aaaaacaaauagaaaCUCAGUu 2 8 137 158 [mm9:11:100324020-100324041:-] 0.5892 120 6 -9.18 -0.1448 MIMAT0004863 mmu-miR-220 217194 Klhl11 uucacagacuGUGACACCAcc || |||||| aaacucaguuCAAUGUGGUaa 3 12 149 169 [mm9:11:100324009-100324029:-] 0.5892 127 0 -8.68 -0.2858 MIMAT0004891 mmu-miR-509-3p 217194 Klhl11 gguAAUGUCUU--UACAGUUAgu ||: | || |||||||| uacUUGGAAAAGUAUGUCAAUga 3 19 66 88 [mm9:11:100324090-100324112:-] 0.5892 137 0 -10.80 -0.1207 MIMAT0004892 mmu-miR-568 217194 Klhl11 cacacauauguaaAUAUGUa |||||| acuuauuacccuaUAUACAa 2 8 105 124 [mm9:11:100324054-100324073:-] 0.5892 120 6 -5.21 -0.1135 MIMAT0004935 mmu-miR-872* 217194 Klhl11 uccuccgaugacguUAUCAAgu |||||| uauauacaagaaguAUAGUUaa 3 9 116 137 [mm9:11:100324041-100324062:-] 0.5892 120 0 -4.79 -0.2387 MIMAT0005835 mmu-miR-1-2-as 217194 Klhl11 accuuacAUUUCUUCAUACAu |::| |||||||| uguuacuUGGAAAAGUAUGUc 2 15 63 83 [mm9:11:100324095-100324115:-] 0.5892 154 7 -10.83 -0.9405 MIMAT0005835 mmu-miR-1-2-as 217194 Klhl11 accuUACAU-UUCUUCAUA-CAu || || ||||||||| || cccuAUAUACAAGAAGUAUAGUu 2 18 113 135 [mm9:11:100324043-100324065:-] 0.5892 132 0 -10.64 -1.2453 MIMAT0005853 mmu-miR-669e 217194 Klhl11 uacuuguacGUGUGUGUUCUgu :|:|:|||||| uuauuacccUAUAUACAAGAag 3 14 107 128 [mm9:11:100324050-100324071:-] 0.5892 133 0 -12.47 -0.2418 MIMAT0005860 mmu-miR-1199 217194 Klhl11 ggcgcgcuggcccUGAGUCu |||||| aaaacaaauagaaACUCAGu 2 8 138 157 [mm9:11:100324021-100324040:-] 0.5892 120 6 -13.02 -0.1311 MIMAT0007868 mmu-miR-1903 217194 Klhl11 acagaguccuucuucUUCUUCc |||||| uauuacccuauauacAAGAAGu 2 8 108 129 [mm9:11:100324049-100324070:-] 0.5892 120 6 -5.54 -0.2496 MIMAT0009400 mmu-miR-1936 217194 Klhl11 cggucaagUGUCGUCCAGUCAAu |:|| | |||||| aaaaacaaAUAGAAACUCAGUUc 2 16 137 159 [mm9:11:100324019-100324041:-] 0.5892 123 6 -9.62 -0.2525 MIMAT0009406 mmu-miR-1941-3p 217194 Klhl11 uacccucuaugacgAUUCUAc |||||| ugugugcugguaaaUAAGAUc 2 8 207 227 [mm9:11:100323951-100323971:-] 0.5905 120 6 -9.31 -0.1063 MIMAT0009428 mmu-miR-1956 217194 Klhl11 aggcgacugagucgGGACCUGa ||||||| gugaggcggggaugCCUGGACu 2 9 42 63 [mm9:11:100324115-100324136:-] 0.5654 140 7 -21.03 -0.1663 MIMAT0000127 mmu-miR-29b 217194 Klhl11 uuGUGACUAAA-GUUUAC-CACGAu | :||:||| :: || ||||| gaCUUUGGUUUGUGUUUGUGUGCUg 2 22 191 215 [mm9:11:100323963-100323987:-] 0.5905 120 0 -16.35 -1.1415 MIMAT0000144 mmu-miR-132 217194 Klhl11 gcuggUACCGACAUCUGACAAu ||| ||| ||||||| cggggAUGCCUG--GACUGUUa 2 18 48 67 [mm9:11:100324111-100324130:-] 0.5654 154 7 -20.00 -0.4211 MIMAT0000150 mmu-miR-138 217194 Klhl11 gccggacuaaguguuGUGGUCGa ||||||| ------------gcuCACCAGCg 2 9 1 11 [mm9:11:100324167-100324177:-] 0.7590 140 7 -12.77 -0.4563 MIMAT0000224 mmu-miR-194 217194 Klhl11 agGUGUACCUCAACGACAAUGu ::| |||| ||||||| gaUGCCUGGA----CUGUUACu 2 21 52 69 [mm9:11:100324109-100324126:-] 0.5654 143 7 -13.40 -0.6466 MIMAT0000366 mmu-miR-290-5p 217194 Klhl11 uuucaCGGG-GGUAUCAAAC-UCa ||:| ||| ||||| || -----GCUCACCAGCGUUUGCAGc 2 18 1 19 [mm9:11:100324159-100324177:-] 0.7590 120 0 -14.62 -0.7859 MIMAT0000533 mmu-miR-26a 217194 Klhl11 ucGGAUAGGACCUAAUGAACUu |:|||::| ||||||: gaCUUAUUUU---CUACUUGGa 2 21 87 105 [mm9:11:100324073-100324091:-] 0.5892 132 0 -14.34 -0.1805 MIMAT0000534 mmu-miR-26b 217194 Klhl11 ugGAUAGGACUUAAUGAACUu :|||::| ||||||: acUUAUUUU---CUACUUGGa 2 20 88 105 [mm9:11:100324073-100324090:-] 0.5892 127 0 -14.07 -0.1805 MIMAT0000555 mmu-miR-324-5p 217194 Klhl11 ugugguuacgggauCCCCUACGc |||||||| cuguucugugaggcGGGGAUGCc 2 10 35 57 [mm9:11:100324121-100324143:-] 0.5415 145 7 -19.87 -0.1097 MIMAT0000582 mmu-miR-338-3p 217194 Klhl11 guuguuuuaguGAC-UACGACCu :|| :|||||| uugguuuguguUUGUGUGCUGGu 2 12 195 217 [mm9:11:100323961-100323983:-] 0.5905 126 6 -12.92 -0.1366 MIMAT0000659 mmu-miR-212 217194 Klhl11 accggcACUGACCUCUGACAAu || ||| ||||||| cggggaUGCCUG--GACUGUUa 2 17 48 67 [mm9:11:100324111-100324130:-] 0.5654 149 7 -17.92 -0.4243 MIMAT0000671 mmu-miR-224 217194 Klhl11 uugccuuggugaucACUGAAu |||||| gaaaaguaugucaaUGACUUa 2 8 72 92 [mm9:11:100324086-100324106:-] 0.5892 120 6 -9.36 -0.1755

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G070180 Klhl11 Mus musculus 217194 19536157 0 0 R44426; MOUSE$KLHL11_01; Binding factors: mmu-let-7a-5p , mmu-let-7b-5p , mmu-let-7c-5p , mmu-let-7d-5p , mmu-let-7e-5p , mmu-let-7f-5p , mmu-let-7g-5p , mmu-let-7i-5p , mmu-miR-196a-5p , mmu-miR-196b-5p , mmu-miR-98-5p // 0 0 R44427; MOUSE$KLHL11_02; Binding factors: mmu-let-7a-5p , mmu-let-7b-5p , mmu-let-7c-5p , mmu-let-7d-5p , mmu-let-7e-5p , mmu-let-7f-5p , mmu-let-7g-5p , mmu-let-7i-5p , mmu-miR-202-3p , mmu-miR-98-5p

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Klhl11 mmu-miR-1-2-as beg:67 end:83 pic:3' ACCTTACATTTCTTCATACAT 5'& ||||| |||||||| &5' TGGAA-------AAGTATGT- 3' Klhl11 mmu-miR-138 beg:0 end:11 pic:3' GCCGGACTAAGTGTTGTGGTCGA 5'& .| ||||||| &5' -----------GCT-CACCAGC- 3' Klhl11 mmu-miR-132 beg:46 end:67 pic:3' GCTGGTACCGACATCTGACAAT 5'& ||. ||| ||| |||||||| &5' CGGGGATGCCTG--GACTGTTA 3' Klhl11 mmu-miR-135astar beg:100 end:118 pic:3' GCGGTGCC-GAGGTTAGGGATAT 5'& || ||. ||||||| &5' ------GGACTTATTACCCTATA 3' Klhl11 mmu-miR-140star beg:153 end:169 pic:3' GGCACCAAGATGGGACACCAT 5'& |||| ||||||| &5' -----GTTCAA---TGTGGTA 3' Klhl11 mmu-miR-150 beg:233 end:249 pic:3' GTGACCATGTTCCCAACCCTCT 5'& .|| ||||.|| &5' ---------GAGAAGTGGGGGA 3' Klhl11 mmu-miR-1839-5p beg:84 end:103 pic:3' GTTCTGGACAAGATAGATGGAA 5'& |||.| ||. |||||.| &5' ---GACTTATTT--TCTACTT- 3' Klhl11 mmu-miR-190b beg:109 end:132 pic:3' TTGGGTTATA-GTTTG-TATAGT 5'& |||| |||| |||. .||| &5' -ACCCTATATACAAGAAGTAT-- 3' Klhl11 mmu-miR-1928 beg:152 end:168 pic:3' CTCGACCGTTACATCGA 5'& ||.| ||||||.|. &5' -AGTT--CAATGTGGT- 3' Klhl11 mmu-miR-1956 beg:43 end:64 pic:3' AGGCGACTGAGTCG--GGACCTGA 5'& |.| .| |||||||| &5' ------GGCGGGGATGCCTGGACT 3' Klhl11 mmu-miR-221 beg:145 end:168 pic:3' CTTTGGGTCGTCTGTTACATCGA 5'& |||||.|||. ||||||.|. &5' GAAACTCAGTT--CAATGTGGT- 3' Klhl11 mmu-miR-222 beg:148 end:168 pic:3' TGGGTCATCGGTCTACATCGA 5'& ||.|||| .|| ||||.|. &5' ACTCAGT--TCA-ATGTGGT- 3' Klhl11 mmu-miR-23a beg:145 end:166 pic:3' CCTTTAGGGACCGTTACACTA 5'& |||| | |||||||.| &5' -GAAACTCAGTTCAATGTGGT 3' Klhl11 mmu-miR-23b beg:149 end:166 pic:3' CCATTAGGGACC-GTTACACTA 5'& |.| |||||||.| &5' ------CTCAGTTCAATGTGGT 3' Klhl11 mmu-miR-26a beg:52 end:74 pic:3' TCGGATAGGACCTAATGAACTT 5'& ||||. ||| |||||||.| &5' -GCCTGGACTG--TTACTTGGA 3' Klhl11 mmu-miR-26b beg:52 end:74 pic:3' TGGATAGGACTTAATGAACTT 5'& .|||. ||| |||||||.| &5' GCCTGGACTG--TTACTTGGA 3' Klhl11 mmu-miR-291b-5p beg:180 end:201 pic:3' CCTCTCCCGG-AGG--TGAAACTAG 5'& || ||| ||||||.|. &5' -------GCAGTCCTGACTTTGGTT 3' Klhl11 mmu-miR-324-5p beg:36 end:57 pic:3' TGTGGTTACGGGAT------CCCCTACGC 5'& |..||. |||||||| &5' --------GTTCTGTGAGGCGGGGATGC- 3' Klhl11 mmu-miR-331-5p beg:48 end:73 pic:3' CCTAGGGACCCTGGT-ATGGATC 5'& |||| ||| ||||.. |||.|.| &5' GGATGCCT-GGACTGTTACTTGG 3' Klhl11 mmu-miR-337-3p beg:6 end:24 pic:3' TCCGTAGTATATCCTCGACTT 5'& ||.|. | ||||||| &5' --GCGTTT----GCAGCTGAA 3' Klhl11 mmu-miR-338-3p beg:203 end:217 pic:3' GTTGTTTTAGTGAC-TACGACCT 5'& .|| .|||||| &5' -----------TTGTGTGCTGG- 3' Klhl11 mmu-miR-3471 beg:209 end:231 pic:3' TTACGGAATGTCAACCTAGAGT 5'& .|||. |||||.| &5' -GTGCTGGTAAATAAGATCTTA 3' Klhl11 mmu-miR-466f-3p beg:198 end:219 pic:3' CACACATACACAC-ACACATAC 5'& ||||| |||||| || ||| &5' -TGTGTTTGTGTGCTG-GTA-- 3' Klhl11 mmu-miR-532-3p beg:238 end:248 pic:3' ACGTTCGGAACCCACACCCTCC 5'& |||||.| &5' --------------GTGGGGG- 3' Klhl11 mmu-miR-669j beg:195 end:214 pic:3' ACAAACGTACACTCATATACGT 5'& |. |||| |.|.||| &5' -----GTTTGTGTTTGTGTGC- 3' Klhl11 mmu-miR-684 beg:235 end:251 pic:3' AACTGAACTTCCCTTTTGA 5'& || || .||||||.| &5' --GAAGTG-GGGGAAAGC- 3' Klhl11 mmu-miR-455 beg:46 end:66 pic:3' CACATATACGGGCACCTGACG 5'& | ||||| |||||||. &5' --GGGGATGCC--TGGACTGT 3'

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 Klhl11 mmu-miR-132 45 69 GCUGGUACCGAC--AUCUGACAAU- |:| : || || |:|||||||| AGGCGG-GGAUGCCUGGACUGUUAC Klhl11 mmu-miR-136 225 248 AGGUAGUAGUUUUG-UUUACCUCA :| |:||:|||: ||:|||:| AUC-UUAUUAAAGAGAAGUGGGGG Klhl11 mmu-miR-145 48 75 UUCCCUAAGGACCCUUU--UGA-CCUG :||||| ||||| ||| ||| CGGGGAUGCCUGGACUGUUACUUGGAA Klhl11 mmu-miR-148b 36 62 UGUUUCAAGACACU--------ACGUGACU- ||||||||| ||| |||: ----UGUUCUGUGAGGCGGGGAUGC-CUGGA Klhl11 mmu-miR-152 32 62 -GGGUUCAAGACAGU--------ACGUGACU- ||| ||||||| | ||| |||: UCCCU-GUUCUGUGAGGCGGGGAUGC-CUGGA Klhl11 mmu-miR-15a 182 220 GUGU-----UUGGU----------AAUACACGACGAU- :|| :||: ||:||||||| || UGCAGUCCUGACUUUGGUUUGUGUUUGUGUGCUGGUAA Klhl11 mmu-miR-16 197 220 GCGGUUAUAAAUGCACGACGAU- |:: :|:|||::|||||| || GGUUUGUGUUUGUGUGCUGGUAA Klhl11 mmu-miR-195 197 220 -CGGUUAUAAAGACACGACGAU- |:: :|:||| ||||||| || GGUUUGUGUUUGUGUGCUGGUAA Klhl11 mmu-miR-207 43 63 -CUCC-CUCCUCUCGGUCCUCUUCG |||| |:||| ||| ||| UGAGGCGGGGAU-GCCUGGAC---- Klhl11 mmu-miR-212 45 69 -CCGGCACUGACC-UCUGACAAU- ||| | ||: :|||||||| AGGCGGGGAUGCCUGGACUGUUAC Klhl11 mmu-miR-217 145 170 UAGGUC----AGUCAAGGACUACGUCAU- :|| ||||||| |||::||| --AUAGAAACUCAGUUCA--AUGUGGUAA Klhl11 mmu-miR-221 148 169 -UUUGGGUCGUCUGUUACAUCGA ||||:|||: ||||||:|: GAAACUCAGUU--CAAUGUGGUA Klhl11 mmu-miR-222 147 169 -CUCUGGGUCAUCGGUCUACAUCGA || ||:|||| :|| ||||:|: AGAAACUCAGU--UCA-AUGUGGUA Klhl11 mmu-miR-24* 17 51 -UGACU----AUAGU-----CGAGUCA-UCCGUG :|||| |:|: |:|| || ||||: AGCUGAAAACUGUUCUCCCUGUUCUGUGAGGCGG Klhl11 mmu-miR-26a 46 75 -CGGAUA---GGACCU---AAUGAACUU- || : |||||| |||||||:| GGCGGGGAUGCCUGGACUGUUACUUGGAA Klhl11 mmu-miR-26b 54 75 UUGGAUAGGACUUAAUGAACUU- :|||: ||| |||||||:| UGCCUGGACUG--UUACUUGGAA Klhl11 mmu-miR-27a 46 67 -CGCCUUGAAUCGG---UGACACUU ||||:: ||| ||||| GGCGGGGAU--GCCUGGACUGUU-- Klhl11 mmu-miR-291a-5p 174 201 UCUCUCC--CGG-AGG--UGAAACUAC | ||| || ||| ||||||:| UGUUAGGUUGCAGUCCUGACUUUGGUU Klhl11 mmu-miR-291b-5p 177 202 CUCUCC--CGG-AGG--UGAAACUAG- ||| || ||| ||||||:|: --UAGGUUGCAGUCCUGACUUUGGUUU Klhl11 mmu-miR-296 42 60 UGUCCUAACUCC-CCCC--CGGGA ||||| |||| |||: ------GUGAGGCGGGGAUGCCUG Klhl11 mmu-miR-29b 190 217 -UUGUGACUAAAGUUU-AC-CACGAU- :|| ||:||| : || |||||: UGACUUUGGUUUGUGUUUGUGUGCUGG Klhl11 mmu-miR-324-3p 5 54 -GGUCG------UCGU-------------GGACC-------CCGUCACC ||||| ||| |||| |||:| || ACCAGCGUUUGCAGCUGAAAACUGUUCUCCCUGUUCUGUGAGGCGG-GGA Klhl11 mmu-miR-324-5p 3 58 -GUGGUU----------AC-----------GGGAU-----------CCCCUACGC |||||: || ||||: |||||||| UCACCAGCGUUUGCAGCUGAAAACUGUUCUCCCUGUUCUGUGAGGCGGGGAUGCC Klhl11 mmu-miR-326 39 63 UGAC-CUCCUUCC---CGGGUCUCC ||| |||| :|| |||::|| UCUGUGAGGCGGGGAUGCCUGGAC- Klhl11 mmu-miR-330 180 205 AGAGACGUCCGGGAC----ACGAAACG- :|||| |:|||| || ||||: --GUUGCA-GUCCUGACUUUGGUUUGUG Klhl11 mmu-miR-339 37 55 ACUCGAGGAC-CUCCUGUCCCU- |:||| |||| |:|||| ----GUUCUGUGAGG-CGGGGAU Klhl11 mmu-miR-340 17 53 CCGAUAUUU-----------CAUUG-ACUCUGCCU- |||: ||| || ||||:|||: AGCUGAAAACUGUUCUCCCUGUUCUGUGAGGCGGGG Klhl11 mmu-miR-377 191 214 -UGUUUUCAA-CGGAAACACACUA || :||| |: |||||||| GACUUUGGUUUGUGUUUGUGUGC- Klhl11 mmu-miR-424 5 23 AGGUUUUGUACUUAACGACGAC- ||| :|:| |||| |||| ACCA--GCGU---UUGCAGCUGA Klhl11 mmu-miR-455-3p 44 67 -UCA--CAUAUACGGGCACCUGACGUA || | ||||| |||||||: GAGGCGGGG-AUGCC--UGGACUGUU- Klhl11 mmu-miR-484 42 62 UAGC-CCUCCCCUGACUCGGACU- :| || |||||: |||||: -GUGAGGCGGGGAU---GCCUGGA Klhl11 mmu-miR-503 14 41 -CGUCA-----UGACAAGGGCGACGAU |||| |||||||:| |||:| UGCAGCUGAAAACUGUUCUCCCUGUUC Klhl11 mmu-miR-680 30 60 -GGGGGUACAG------UCG--UCUACGGG- |:||| |||: :|| :||||||: UCUCCC-UGUUCUGUGAGGCGGGGAUGCCUG Klhl11 mmu-miR-681 16 50 -UCGAC------------GGAC-GGUCGCUCCGAC ||||| |||| :| |:||||| CAGCUGAAAACUGUUCUCCCUGUUCUGUGAGGCG- Klhl11 mmu-miR-684 237 253 AACUGAACUUCCCUUUUGA || ::||||||:| -AGAAGU-GGGGGAAAGC- Klhl11 mmu-miR-689 32 57 CCUGGGGCG----GCU-CGCCCCUGC- |||:|: :|| |||||||:| --UCCCUGUUCUGUGAGGCGGGGAUGC Klhl11 mmu-miR-693-3p 6 31 AAUGUCGG---UGUAGACUUUCGACG- |||| :|| |||||| |||: --CCAGCGUUUGCAGCUGAAAACUGUU Klhl11 mmu-miR-693-5p 190 217 CUUUUGAAAGCCU-------ACAC-CGAC- :||||| || |||| |||| --UGACUUU-GGUUUGUGUUUGUGUGCUGG Klhl11 mmu-miR-715 44 63 GUGCGCCCCCACACGUGCCUC | |||||| ||| :||| GAGGCGGGGA--UGCCUGGAC Klhl11 mmu-miR-718 51 76 GCUGUGGGCC-GGCCC---GCCUUC ||::||:|| |:| :|||| GGAUGCCUGGACUGUUACUUGGAAA Klhl11 mmu-miR-719 37 56 UUGUAAAAAGACA--UCGGCUCUA- |||||| :|| |:||| ------GUUCUGUGAGGCGGGGAUG Klhl11 mmu-miR-802 48 74 -UUCCUACUUAGAA---ACAAUGA-CU- ::||||| || ||||||| |: CGGGGAUGC--CUGGACUGUUACUUGGA Klhl11 mmu-miR-132 60 67 G--------------------CUGGUACCGAC--AUCUGACAAU |:| : || || |:|||||||| ACUGUUCUCCCUGUUCUGUGAGGCGG-GGAUGCCUGGACUGUUAC Klhl11 mmu-miR-212 60 67 ---------------------CCGGCACUGACC-UCUGACAAU ||| | ||: :|||||||| ACUGUUCUCCCUGUUCUGUGAGGCGGGGAUGCCUGGACUGUUAC Klhl11 mmu-miR-324-5p 50 57 ----------------GUGGUUACGGGAU------CCCCUACGC | || ||::||: |||||||| GCAGCUGAAAACUGUUCUCCC-UGUUCUGUGAGGCGGGGAUGCC Klhl11 mmu-miR-132 48 67 GCUGGUACCGACAUCUGACAAU ||: ||| ||| |||||||| CGGGGATGCCTG--GACTGTTA Klhl11 mmu-miR-136 224 247 agguAGUAGUUU-UGUUUACCUCa |:||:||| | ||:|||:| gatcTTATTAAAGAGAAGTGGGGg Klhl11 mmu-miR-148b 32 65 uguuuCAAGACACU------------ACGUGACu ||||||||| || |||| tccctGTTCTGTGAGGCGGGGATGCCTGGACTGt Klhl11 mmu-miR-152 33 65 GGGUUCAAGACA------------GUACGUGACu ||| ||||||| | || |||| CCC-TGTTCTGTGAGGCGGGGATGCCTGGACTGt Klhl11 mmu-miR-15a 197 218 guguuugguAAUACACGACGAU ||:||||||| || ggtttgtgtTTGTGTGCTGGTA Klhl11 mmu-miR-195 198 218 CGGUUAUAAAGACACGACGAU |:: :|:||| ||||||| || GTTTGTGTTTGTGTGCTGGTA Klhl11 mmu-miR-207 44 78 CUCC-CUCCU------CU--CGGU---CCUCUUCg |||| |:||| || |::| ||| ||| GAGGCGGGGATGCCTGGACTGTTACTTGGAAAAGt Klhl11 mmu-miR-212 46 67 CCGGC---ACUGACCUCUGACAAU ||| | || ||| |||||||| GGCGGGGATGCCTG--GACTGTTA Klhl11 mmu-miR-217 147 168 uaggUCAGUCAAGGACUACGUCAU | ||||||| |||::||| agaaACTCAGTTC--AATGTGGTA Klhl11 mmu-miR-221 149 168 UUUGGGUCGUCUGUUACAUCga ||||:|||: ||||||:| AAACTCAGT--TCAATGTGGta Klhl11 mmu-miR-222 148 168 CUCUGGGUCAUCGGUCUACAUCga || ||:|||| :|| ||||:| GAAACTCAGT--TCA-ATGTGGta Klhl11 mmu-miR-24* 25 50 UGACUAUA--GUCGAGUCA-UCCGug |||| | | | |:|| || |||| ACTGTTCTCCCTGTTCTGTGAGGCgg Klhl11 mmu-miR-26a 55 73 CGGAUAGGACCUAAUGAACUU ||||: ||| |||||||:| GCCTGGACTG--TTACTTGGA Klhl11 mmu-miR-27a 47 68 CGCCUUGAAUCGG---UGACACUu ||||:: | ||| ||||| | GCGGGGAT--GCCTGGACTGTTAc Klhl11 mmu-miR-291b-5p 175 200 cucUCC--CG-GAGG--UGAAACUAg ||| || ||| ||||||:| gttAGGTTGCAGTCCTGACTTTGGTt Klhl11 mmu-miR-296 36 59 uguccuaACUCC-CCCC--CGGga ||||| |||| ||| tgttctgTGAGGCGGGGATGCCtg Klhl11 mmu-miR-29b 191 215 uUGUGACUAAA-GUUUAC-CACGAu || :||:||| :: || ||||| gACTTTGGTTTGTGTTTGTGTGCTg Klhl11 mmu-miR-324-3p 33 53 GGUCGUCGUGG-ACCCCGUCACc || | |: |: || |||:| | CC--CTGTTCTGTGAGGCGGGGa Klhl11 mmu-miR-324-5p 31 57 GUGGUUACGGGAU------CCCCUACGc | || ||::||: |||||||| CTCC-CTGTTCTGTGAGGCGGGGATGCc Klhl11 mmu-miR-326 39 63 uGAC-CUCCUUCC---CGGGUCUcc ||| |||| :|| |||::|| tCTGTGAGGCGGGGATGCCTGGAct Klhl11 mmu-miR-330 178 203 agagACGUCCGG---GACACGAAACg ||||| || || || |||| aggtTGCAGTCCTGACTTTGGTTTGt Klhl11 mmu-miR-339 27 53 ACUCGA-GGAC----CUC-CUGUCCCU || || |||| | | |:|:|||| TGTTCTCCCTGTTCTGTGAGGCGGGGA Klhl11 mmu-miR-340 29 51 ccgauauuucauugACUCUGCCu ||||:||| ttctccctgttctgTGAGGCGGg Klhl11 mmu-miR-377 193 214 uguuuucAACGGAAACACACua |||: |||||||| ctttggtTTGTGTTTGTGTGct Klhl11 mmu-miR-455-3p 46 67 uCACAUAUACGGGCACCUGACgua | | : ||||| ||||||| gGCGGGGATGCC--TGGACTGtta Klhl11 mmu-miR-484 38 60 uAG-CCCUCC-CCUGACU-CGGACu || | |||| ||: || ||||| tTCTGTGAGGCGGG--GATGCCTGg Klhl11 mmu-miR-503 15 40 CGUC-A----UGACAAGGGCGACGAu |||| | |||||||:| |||:| GCAGCTGAAAACTGTTCTCCCTGTTc Klhl11 mmu-miR-680 31 58 GGGGG----UACAGU-CG--UCUACGGg |:||| ||| | || :|||||| CTCCCTGTTCTGTGAGGCGGGGATGCCt Klhl11 mmu-miR-681 29 50 ucGACGGAC-GGUCGCUCCGac || |||| :| |:||||| ttCTCCCTGTTCTGTGAGGCgg Klhl11 mmu-miR-684 236 252 aaCUGAACUUCCCUUUUGa || || :||||||:| gaGAAGTG-GGGGAAAGC- Klhl11 mmu-miR-689 30 55 ccuGGGGC--GGC---UCGCCCCUGC |||:| |:| :|||||||:| tctCCCTGTTCTGTGAGGCGGGGATG Klhl11 mmu-miR-693-3p 4 29 aauGUCG---GUGUAGACUUUCGACg |||| ::|| |||||| ||| cacCAGCGTTTGCAGCTGAAAACTGt Klhl11 mmu-miR-693-5p 194 215 cuuuugAAAGCCUACAC-CGAC || :| |||| |||| tttggtTTGTGTTTGTGTGCTG Klhl11 mmu-miR-718 28 53 gcuGUGGGCC--GGC---CCGCCuuc | ||| | |:| ||||| gttCTCCCTGTTCTGTGAGGCGGgga Klhl11 mmu-miR-719 31 54 uuguaAAAAGACA--UCGGCUCUA | |||||| :|| |:||| ctcccTGTTCTGTGAGGCGGGGAT Klhl11 mmu-miR-802 49 71 uuCCUACUUAGA---AACAAUGAcu ||||| || ||||||| ggGGATG--CCTGGACTGTTACTtg

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Klhl11 RAID00022813 mmu-miR-692 miRNA MIMAT0003471 Klhl11 mRNA 217194 Prediction 0.1828 Klhl11 RAID00457852 mmu-miR-3098-5p miRNA MIMAT0014917 Klhl11 mRNA 217194 Prediction 0.1828 Klhl11 RAID00669744 mmu-miR-1912-3p miRNA MIMAT0014958 Klhl11 mRNA 217194 Prediction 0.1828 Klhl11 RAID00740674 mmu-miR-19b-3p miRNA MIMAT0000513 Klhl11 mRNA 217194 Prediction 0.1828 Klhl11 RAID00879538 mmu-miR-132-3p miRNA MIMAT0000144 Klhl11 mRNA 217194 Prediction 0.1828 Klhl11 RAID01034264 mmu-miR-324-5p miRNA MIMAT0000555 Klhl11 mRNA 217194 Prediction 0.1828 Klhl11 RAID01122167 mmu-miR-29b-3p miRNA MIMAT0000127 Klhl11 mRNA 217194 CLIP-seq//Prediction 0.6308 Klhl11 RAID01356364 mmu-miR-224-5p miRNA MIMAT0000671 Klhl11 mRNA 217194 Prediction 0.1828 Klhl11 RAID01453015 mmu-miR-6964-3p miRNA MIMAT0027829 Klhl11 mRNA 217194 Prediction 0.1828 Klhl11 RAID01798761 mmu-miR-26b-5p miRNA MIMAT0000534 Klhl11 mRNA 217194 Prediction 0.1828 Klhl11 RAID02026461 mmu-miR-338-3p miRNA MIMAT0000582 Klhl11 mRNA 217194 Prediction 0.1828 Klhl11 RAID02128077 mmu-miR-8118 miRNA MIMAT0031424 Klhl11 mRNA 217194 Prediction 0.1828 Klhl11 RAID02192345 mmu-miR-212-3p miRNA MIMAT0000659 Klhl11 mRNA 217194 Prediction 0.2202 Klhl11 RAID02265193 mmu-miR-7028-3p miRNA MIMAT0027961 Klhl11 mRNA 217194 Prediction 0.1828 Klhl11 RAID02386718 mmu-miR-7009-3p miRNA MIMAT0027923 Klhl11 mRNA 217194 Prediction 0.1828 Klhl11 RAID02429939 mmu-miR-494-3p miRNA MIMAT0003182 Klhl11 mRNA 217194 Prediction 0.1828 Klhl11 RAID02680095 mmu-miR-138-5p miRNA MIMAT0000150 Klhl11 mRNA 217194 Prediction 0.1828 Klhl11 RAID02720908 mmu-miR-7215-5p miRNA MIMAT0028398 Klhl11 mRNA 217194 Prediction 0.1828 Klhl11 RAID02781315 mmu-miR-26a-5p miRNA MIMAT0000533 Klhl11 mRNA 217194 Prediction 0.1828 Klhl11 RAID03201942 mmu-miR-219a-5p miRNA MIMAT0000664 Klhl11 mRNA 217194 Prediction 0.1828 Klhl11 RAID03430912 mmu-miR-7002-3p miRNA MIMAT0027907 Klhl11 mRNA 217194 Prediction 0.1828 Klhl11 RAID03561015 mmu-miR-92b-3p miRNA MIMAT0004899 Klhl11 mRNA 217194 Prediction 0.1828 Klhl11 RAID03650215 mmu-miR-6958-3p miRNA MIMAT0027817 Klhl11 mRNA 217194 Prediction 0.1828 Klhl11 RAID03726413 mmu-miR-194-5p miRNA MIMAT0000224 Klhl11 mRNA 217194 Prediction 0.2381 Klhl11 RAID03749912 mmu-miR-1b-5p miRNA MIMAT0005835 Klhl11 mRNA 217194 Prediction 0.1828 Klhl11 RAID03886100 mmu-miR-290a-5p miRNA MIMAT0000366 Klhl11 mRNA 217194 Prediction 0.1828 Klhl11 RAID03911647 mmu-miR-23a-3p miRNA MIMAT0000532 Klhl11 mRNA 217194 CLIP-seq 0.5483 Klhl11 RAID03998558 mmu-miR-6715-3p miRNA MIMAT0029877 Klhl11 mRNA 217194 Prediction 0.1828 Klhl11 RAID04346952 G730013B05Rik lncRNA 619312 Klhl11 protein 217194 Microarray//RNA-seq 0.6606