DNA & RNA Element - AREsite Gene Name Motif CDS Area ARE Area Evidence Trim15; mCG_23227 ATTTA 15-959 1714-1718;1797-1801

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004529 mmu-miR-125b* 69097 Trim15 uccagGGUUCUUGG--ACUGAACa |||:||||| ||||||| gguaaCCAGGAACCUGUGACUUGu 2 18 727 750 [mm9:17:36997770-36997793:-] 0.5253 168 7 -29.01 -0.3859 MIMAT0004530 mmu-miR-127* 69097 Trim15 uagUCUCGGGAGACUCGAAGUc | |||: | ||||||| caaAAAGCUGUAAAAGCUUCAa 2 20 691 712 [mm9:17:36997808-36997829:-] 0.5253 151 7 -13.17 -0.8548 MIMAT0004534 mmu-miR-145* 69097 Trim15 guucuUGUCAUAAAGGUCCUUa ::|| :| ||||||| ccacuGUAGGGUAACCAGGAAc 2 18 718 739 [mm9:17:36997781-36997802:-] 0.5253 149 7 -13.31 -0.4916 MIMAT0000376 mmu-miR-298 69097 Trim15 ccCUUCUUGUCGGGAGGAGACGg |:| |::| :|||||||| cuGGAAAGUA-AGUUCCUCUGCc 2 22 444 465 [mm9:17:36998055-36998076:-] 0.5227 151 7 -24.42 -0.5266 MIMAT0004628 mmu-miR-21* 69097 Trim15 cugucgGGUA-GCUGACGACAAc |::| | :|||||||| ---guaCUGUGCUGCUGCUGUUc 2 17 1 20 [mm9:17:36998500-36998519:-] 0.5322 151 7 -13.98 -0.5053 MIMAT0004630 mmu-miR-26b* 69097 Trim15 cuCGGUUC-AUUACCUCU-UGUCc |||| | || ||||| |||| cuGCCAUGCAAAAGGAGACACAGc 2 21 323 346 [mm9:17:36998174-36998197:-] 0.5703 131 0 -16.28 -0.2585 MIMAT0004661 mmu-miR-28* 69097 Trim15 aggucGUCGAGU-GUUAGAU-CAc ||||||| : ||||| || cccuuCAGCUCAUUUAUCUACGUu 2 18 827 850 [mm9:17:36997670-36997693:-] 0.5316 128 0 -20.87 -0.7056 MIMAT0004746 mmu-miR-409-5p 69097 Trim15 uacguuucaACGAGCCCAUUGGa || | |||||||| aaugaccacUG-UAGGGUAACCa 2 15 713 734 [mm9:17:36997786-36997807:-] 0.5253 148 7 -16.05 -0.4666 MIMAT0004746 mmu-miR-409-5p 69097 Trim15 uacguuucaacgagccCAUUGGa |||||| uguuuuaauaaaauauGUAACCu 2 8 860 882 [mm9:17:36997638-36997660:-] 0.5316 120 6 -10.11 -0.1071 MIMAT0001094 mmu-miR-412 69097 Trim15 gcCGAUCACCUGGU-CCACUu |:| |||| || ||||| cuGUUCCUGGA-CACGGUGAu 2 19 583 602 [mm9:17:36997918-36997937:-] 0.5227 120 0 -17.14 -0.1368 MIMAT0002889 mmu-miR-532-5p 69097 Trim15 ugccaggaugugagUUCCGUAc ||||||| agccagcagacaggAAGGCAUu 2 9 617 638 [mm9:17:36997882-36997903:-] 0.5227 140 7 -12.42 -0.1724 MIMAT0002889 mmu-miR-532-5p 69097 Trim15 ugCCAGGA--UGUGAGUUCC-GUAc || ||| :||| ||||| ||| caGGACCUGAGCAC-CAAGGACAUu 2 21 257 280 [mm9:17:36998240-36998263:-] 0.5854 125 0 -19.09 -0.2674 MIMAT0004781 mmu-miR-532-3p 69097 Trim15 acguucggaacCCACACCCUCc |||||||||| agaugugaccaGGUGUGGGAGa 2 12 362 383 [mm9:17:36998137-36998158:-] 0.5552 155 7 -23.34 -0.4258 MIMAT0003732 mmu-miR-668 69097 Trim15 ccaucACCCGGCUCGGCU-CACUGu || || | |: || ||||| uguccUGCGCAGUGUAGAUGUGACc 2 20 347 371 [mm9:17:36998149-36998173:-] 0.5552 123 0 -11.61 -0.1535 MIMAT0003734 mmu-miR-667 69097 Trim15 gaaccCGACCCACCGUCCACAGu || ||| | ||||||| cugaaGCGGGGAAG-AGGUGUCa 2 19 126 147 [mm9:17:36998373-36998394:-] 0.5534 152 7 -22.45 -0.1599 MIMAT0003891 mmu-miR-770-3p 69097 Trim15 gguCGAGG-UG--CAGUC-CGGGUGc ||||| || | ||| |||||| uuuGCUCCAACUGGCCAGCGCCCACc 2 20 298 323 [mm9:17:36998197-36998222:-] 0.5854 129 6 -25.59 -0.1989 MIMAT0014815 mmu-miR-3099* 69097 Trim15 guucccGACCU-UCCUUCGACc :|||| | ||||||| ugacuuUUGGACACGAAGCUGg 2 16 760 781 [mm9:17:36997739-36997760:-] 0.5228 154 7 -19.93 -0.2737 MIMAT0003897 mmu-miR-759 69097 Trim15 cagUUUUAACAAACGUGAGACg :||: || | ||||||| gggGAAGAGGUGU-CACUCUGg 2 20 133 153 [mm9:17:36998367-36998387:-] 0.5534 149 7 -15.24 -0.1409 MIMAT0003897 mmu-miR-759 69097 Trim15 caguUUUAACAAACGUGA-GACg ||:| ||| |||| ||| uagcAAGUCCUUU-CACUCCUGu 2 19 565 586 [mm9:17:36997934-36997955:-] 0.5227 120 0 -11.64 -0.2446 MIMAT0003898 mmu-miR-760 69097 Trim15 agGGGUGUCUGGGUC-UCGGc ||: |||| ||| |||| guCCUUCAGAAACAGAAGCCu 2 19 70 90 [mm9:17:36998430-36998450:-] 0.4492 126 0 -21.40 -0.1082 MIMAT0003454 mmu-miR-423-3p 69097 Trim15 ugACUCCCC-GGAGU-CUGG-CUCGa ||||||| : || |||| |||| ggUGAGGGGAUGGCAGGACCUGAGCa 2 22 244 269 [mm9:17:36998251-36998276:-] 0.5854 131 0 -30.22 -0.2633 MIMAT0003464 mmu-miR-686 69097 Trim15 agaaguggcagaCCCUUCGUUa ||||||||| ugggauuuggaaGGGAAGCAAa 2 11 669 690 [mm9:17:36997830-36997851:-] 0.5240 150 7 -16.09 -0.6810 MIMAT0004189 mmu-miR-693-3p 69097 Trim15 aaugUCGGUGUAGACUUUCGACg || || | | ||||||| gggaAG-CA-AACAAAAAGCUGu 2 20 681 701 [mm9:17:36997819-36997839:-] 0.5240 143 7 -12.46 -0.8389 MIMAT0003487 mmu-miR-697 69097 Trim15 agagguguccuggUCCUACAa ||||||| ucuacguucugagAGGAUGUu 2 9 843 863 [mm9:17:36997657-36997677:-] 0.5316 140 7 -16.12 -0.5465 MIMAT0003494 mmu-miR-704 69097 Trim15 gaUCCUCGUCUCGUGU-ACAGa || | || || ||| |||| ugAGCACCA-AGGACAUUGUCu 2 20 264 284 [mm9:17:36998236-36998256:-] 0.5854 121 0 -17.20 -0.1046 MIMAT0003498 mmu-miR-708* 69097 Trim15 gaucuUCGAGU-GUCAGAU-CAAc |||||| : |||| ||| ccuucAGCUCAUUUAUCUACGUUc 2 18 828 851 [mm9:17:36997669-36997692:-] 0.5316 120 0 -14.02 -0.8961 MIMAT0004845 mmu-miR-881* 69097 Trim15 ucuacacUGACAAUAGAGAGAc || || |||||||| ccuggacACGGUGAUCUCUCUg 2 16 588 609 [mm9:17:36997911-36997932:-] 0.5227 159 7 -20.40 -0.1429 MIMAT0004934 mmu-miR-872 69097 Trim15 ggACUUG-AUUGUUCAUUGGAa | ||: ||:| ||||||| uuUUAAUAAAAUAUGUAACCUa 2 20 862 883 [mm9:17:36997637-36997658:-] 0.5316 154 7 -10.49 -1.3279 MIMAT0005833 mmu-miR-669d 69097 Trim15 uguAUAUGUAC-GUGUGU-GUUCa |: | ||| | |||| |||| ccuUGCAAAUGUCCCACACCAAGg 2 20 386 409 [mm9:17:36998111-36998134:-] 0.5552 122 0 -13.35 -0.4194 MIMAT0005841 mmu-miR-669h-5p 69097 Trim15 cgugaguugauaugugGGUACGUa ||||||| ggccagcgcccaccugCCAUGCAa 2 9 310 333 [mm9:17:36998187-36998210:-] 0.5703 140 7 -17.91 -0.2299 MIMAT0005851 mmu-miR-1193 69097 Trim15 cuAUCAUUUUGCCCACUGGAu || |||||: || |||| uuUAAUAAAAUAUGUAACCUa 2 20 863 883 [mm9:17:36997637-36997657:-] 0.5316 135 0 -11.08 -0.1824 MIMAT0007872 mmu-miR-1906 69097 Trim15 ucgggacggagucCGACGACGu |||||||| ------guacuguGCUGCUGCu 2 10 1 16 [mm9:17:36998504-36998519:-] 0.5322 145 7 -17.19 -0.9574 MIMAT0007876 mmu-miR-1907 69097 Trim15 uggaggucUAGGAGACGACGAg :| || ||||||| --------GUACUGUGCUGCUg 2 15 1 14 [mm9:17:36998506-36998519:-] 0.5322 150 7 -14.80 -0.2705 MIMAT0009392 mmu-miR-1929 69097 Trim15 gagacgagauauuuCAGGAUCUu |||||||| gacaggaaggcauuGUCCUAGAc 2 10 625 647 [mm9:17:36997873-36997895:-] 0.5227 145 7 -11.53 -0.1967 MIMAT0009394 mmu-miR-1931 69097 Trim15 cgguagcguggUCGGGAACGUa || ||||||| aggugugggagAGACCUUGCAa 2 12 372 393 [mm9:17:36998127-36998148:-] 0.5552 147 7 -14.71 -0.5142 MIMAT0009399 mmu-miR-1935 69097 Trim15 ucucuaggcggucGGAGACGGa |||||||| uggaaaguaaguuCCUCUGCCu 2 10 445 466 [mm9:17:36998054-36998075:-] 0.5227 145 7 -18.91 -0.2832 MIMAT0009402 mmu-miR-1938 69097 Trim15 cuGGCUUGAUGUUCAGGGUGGc :| ||| :| ||||||| uuUCUAACCCUA--UCCCACCu 2 21 426 445 [mm9:17:36998075-36998094:-] 0.5389 145 7 -14.30 -0.6887 MIMAT0009423 mmu-miR-1952 69097 Trim15 gucuuccUCCCACCUCu | ||||||| aaagacuAAGGUGGAGc 2 11 474 490 [mm9:17:36998030-36998046:-] 0.5227 142 7 -14.11 -0.2010 MIMAT0009428 mmu-miR-1956 69097 Trim15 agGCGACUGAG--UCGGGACCUGa | :| |||| : :||||||| ucCUUUCACUCCUGUUCCUGGACa 2 21 572 595 [mm9:17:36997925-36997948:-] 0.5227 151 7 -21.80 -0.4329 MIMAT0009435 mmu-miR-1962 69097 Trim15 uacacaGGGUCACGGUC-GGAGa || ||| |||| |||| acaaagCCAAGU-CCAGUCCUCu 2 17 165 186 [mm9:17:36998334-36998355:-] 0.5954 122 0 -21.04 -0.2921 MIMAT0009445 mmu-miR-1274a 69097 Trim15 acCGCGGACUUGUC--CCUGGACu |:| |:|::| ||||||| ggGUGAGGGGAUGGCAGGACCUGa 2 21 243 266 [mm9:17:36998254-36998277:-] 0.5854 147 7 -26.97 -0.2484 MIMAT0009460 mmu-miR-1982.1 69097 Trim15 gacacccUCUUGUAUCCCACUCu || :: |||||||| uccccuaAGUGUCCAGGGUGAGg 2 17 228 250 [mm9:17:36998270-36998292:-] 0.5854 148 7 -17.12 -0.2625 MIMAT0011222 mmu-miR-2146 69097 Trim15 guGUACCUUGGGAA-GAGGUg ||| ||::|| ||||| gcCAUAAUACUUUUGCUCCAa 2 19 287 307 [mm9:17:36998213-36998233:-] 0.5854 122 0 -14.89 -0.7314 MIMAT0000124 mmu-miR-15b 69097 Trim15 acauuugguacuACACGACGAu ||||||||| --------guacUGUGCUGCUg 2 11 1 14 [mm9:17:36998506-36998519:-] 0.5322 150 7 -15.91 -0.2681 MIMAT0000133 mmu-miR-101a 69097 Trim15 aagucaauaguguCAUGACAu ||||||| -------------GUACUGUg 2 9 1 8 [mm9:17:36998512-36998519:-] 0.5322 140 7 -9.56 -0.2082 MIMAT0000141 mmu-miR-130a 69097 Trim15 uaCGGGA-AAAUUGUAAC-GUGAc |:||| | |: |||| |||| caGUCCUCUCUGUGAUUGCCACUu 2 21 178 201 [mm9:17:36998319-36998342:-] 0.5205 123 0 -13.06 -0.1418 MIMAT0000146 mmu-miR-134 69097 Trim15 ggggagaccaguuGGUCAGUGu :||||||| ccacaccaaggcuUCAGUCACc 2 10 399 420 [mm9:17:36998100-36998121:-] 0.5552 141 7 -16.23 -0.7417 MIMAT0000148 mmu-miR-136 69097 Trim15 ggUAGUAGUUUUGUUUACCUCa :| ||| ::||||||| cgGUGAUCUCUCUGAAUGGAGa 2 21 596 617 [mm9:17:36997903-36997924:-] 0.5227 148 7 -13.65 -0.2295 MIMAT0000150 mmu-miR-138 69097 Trim15 gcCGGACUAAGUGUUGUGGUCGa || | :| | :|||||||| agGCAUUGUCCUAGACACCAGCa 2 22 632 654 [mm9:17:36997866-36997888:-] 0.5227 157 7 -21.44 -0.9507 MIMAT0000150 mmu-miR-138 69097 Trim15 gccggACUAAGUGU-UGUGGUCGa || || | |||||||| ggaaaUGCGGCAGACACACCAGCa 2 19 494 517 [mm9:17:36998003-36998026:-] 0.5227 149 7 -21.56 -0.3692 MIMAT0000158 mmu-miR-146a 69097 Trim15 uuGGGU--ACC-UUAAGUCAA-GAGu |||| ||| || | |||| ||| auCCCACCUGGAAAGUAAGUUCCUCu 2 21 437 462 [mm9:17:36998058-36998083:-] 0.5389 126 0 -18.32 -0.1952 MIMAT0000159 mmu-miR-149 69097 Trim15 cccucACUUCUGUGCCUCGGUCu |||| : | ||||||| cucucUGAAUGGA--GAGCCAGc 2 19 603 623 [mm9:17:36997897-36997917:-] 0.5227 147 7 -15.62 -0.2213 MIMAT0000164 mmu-miR-154 69097 Trim15 gcuuccGUUGUGCCUAUUGGAu :|| |: :|||||| uuuuaaUAAAAUAUGUAACCUa 2 17 862 883 [mm9:17:36997637-36997658:-] 0.5316 132 6 -12.06 -0.5397 MIMAT0000225 mmu-miR-195 69097 Trim15 cgguuauaAAGACACGACGAu | |||||||||| -------gUACUGUGCUGCUg 2 14 1 14 [mm9:17:36998506-36998519:-] 0.5322 157 7 -20.89 -0.2611 MIMAT0000385 mmu-miR-106a 69097 Trim15 gauggacgugacaaucGUGAAAc |||||| gcuguucuggccacuuCACUUUa 2 8 14 36 [mm9:17:36998484-36998506:-] 0.5322 120 6 -13.15 -0.1452 MIMAT0000386 mmu-miR-106b 69097 Trim15 uaGACGUGA-CAGU--CGUGAAAu |||: || | || |||||| ugCUGUUCUGGCCACUUCACUUUa 2 20 13 36 [mm9:17:36998484-36998507:-] 0.5322 121 6 -16.55 -0.1452 MIMAT0000387 mmu-miR-130b 69097 Trim15 uaCGGGAAAG-UAGUAAC-GUGAc |:||| || :| |||| |||| caGUCCUCUCUGUGAUUGCCACUu 2 21 178 201 [mm9:17:36998319-36998342:-] 0.5205 131 0 -17.91 -0.1418 MIMAT0000526 mmu-miR-15a 69097 Trim15 guguuugguaAU-ACACGACGAu || ||||||||| ---------gUACUGUGCUGCUg 2 13 1 14 [mm9:17:36998506-36998519:-] 0.5322 151 7 -15.91 -0.2681 MIMAT0000527 mmu-miR-16 69097 Trim15 gcgguuauaaAUG-CACGACGAu ||| |||||||| ---------gUACUGUGCUGCUg 2 13 1 14 [mm9:17:36998506-36998519:-] 0.5322 151 7 -17.84 -0.2611 MIMAT0000529 mmu-miR-20a 69097 Trim15 gauggacgugauauucGUGAAAu |||||| gcuguucuggccacuuCACUUUa 2 8 14 36 [mm9:17:36998484-36998506:-] 0.5322 120 6 -16.27 -0.1452 MIMAT0000540 mmu-miR-93 69097 Trim15 gauggacgugcuugucGUGAAAc |||||| gcuguucuggccacuuCACUUUa 2 8 14 36 [mm9:17:36998484-36998506:-] 0.5322 120 6 -12.67 -0.1452 MIMAT0000548 mmu-miR-322 69097 Trim15 agguuuUGUACUUAACGACGAc || || : ||||||| ----guAC-UGUGCUGCUGCUg 2 17 1 17 [mm9:17:36998503-36998519:-] 0.5322 146 7 -15.87 -0.9493 MIMAT0000597 mmu-miR-346 69097 Trim15 ucUCCGUCCGUGAGC-CCGUCUGu || |||| | :| ||||||| ggAGCCAGGGAAAUGCGGCAGACa 2 22 486 509 [mm9:17:36998011-36998034:-] 0.5227 160 7 -29.87 -0.1367 MIMAT0000616 mmu-miR-101b 69097 Trim15 aagucgauaguguCAUGACAu ||||||| -------------GUACUGUg 2 9 1 8 [mm9:17:36998512-36998519:-] 0.5322 140 7 -9.56 -0.2082 MIMAT0000649 mmu-miR-17 69097 Trim15 gauggacgugacauucGUGAAAc |||||| gcuguucuggccacuuCACUUUa 2 8 14 36 [mm9:17:36998484-36998506:-] 0.5322 120 6 -13.15 -0.1452 MIMAT0000656 mmu-miR-139-5p 69097 Trim15 gaccucUGUGCACGUGACAUCu | |:| |||||||| gcuucaAAAUGACCACUGUAGg 2 17 706 727 [mm9:17:36997793-36997814:-] 0.5253 152 7 -16.42 -0.2512 MIMAT0000671 mmu-miR-224 69097 Trim15 uugCCUUGGUGAUCACUGAAu ||||| || ||||||| ccaGGAAC--CU-GUGACUUg 2 19 732 749 [mm9:17:36997771-36997788:-] 0.5253 153 7 -21.66 -0.3535 MIMAT0003151 mmu-miR-378 69097 Trim15 ggaagacugaGGUUCAGGUCa |||||||||| gaccacaaagCCAAGUCCAGu 2 12 161 181 [mm9:17:36998339-36998359:-] 0.5954 155 7 -22.56 -0.3702 MIMAT0003172 mmu-miR-542-3p 69097 Trim15 aaAGUCAAUAGUUAGACAGUGu |||| | ||: ||||||| ccUCAGACA-CAG-CUGUCACu 2 21 47 66 [mm9:17:36998454-36998473:-] 0.5322 152 7 -16.32 -0.2320 MIMAT0003187 mmu-miR-20b 69097 Trim15 gauggacgugauacucGUGAAAc |||||| gcuguucuggccacuuCACUUUa 2 8 14 36 [mm9:17:36998484-36998506:-] 0.5322 120 6 -13.77 -0.1452 MIMAT0003450 mmu-miR-488 69097 Trim15 cugguUCUUUGUCGGAAAGUu || || : ||||||| uguguAGCAA-GUCCUUUCAc 2 17 561 580 [mm9:17:36997940-36997959:-] 0.5227 146 7 -11.23 -0.2342 MIMAT0003453 mmu-miR-497 69097 Trim15 auguuuggUGUCACACGACGAc ::| ||||||||| --------GUACUGUGCUGCUg 2 15 1 14 [mm9:17:36998506-36998519:-] 0.5322 154 7 -19.61 -0.2658 MIMAT0003475 mmu-miR-146b 69097 Trim15 ucGGAUACCUUAAGUCAA-GAGu |||: | || | |||| ||| caCCUG-GAAAGUAAGUUCCUCu 2 21 441 462 [mm9:17:36998058-36998079:-] 0.5389 122 0 -13.91 -0.1952 MIMAT0003515 mmu-miR-721 69097 Trim15 aaGGGGGAAAAUUAAC-GUGAc ||:|: | |:|||| |||| guCCUCUCUGUGAUUGCCACUu 2 20 180 201 [mm9:17:36998319-36998340:-] 0.5205 131 0 -17.96 -0.1418 MIMAT0004936 mmu-miR-873 69097 Trim15 uccucUGAGUGUUCAAGGACg |||| : ||||||| cuuucACUCCU--GUUCCUGg 2 17 574 592 [mm9:17:36997928-36997946:-] 0.5227 145 7 -16.69 -0.2169

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G116129 Trim15 Mus musculus 69097

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Trim15 mmu-miR-693-3p beg:682 end:702 pic:3' AATGTCGG-TGTAGACTTTCGACG 5'& ||| ||| |||||||. &5' ----AGCAAACAA---AAAGCTGT 3' Trim15 mmu-miR-139-5p beg:713 end:727 pic:3' GACCTCTGTGCACGTGACATCT 5'& ||| ||||||||. &5' -----GAC-----CACTGTAGG 3' Trim15 mmu-miR-127star beg:693 end:712 pic:3' TAGTCTCGGGAGACTCGAAGTC 5'& |||. | ||||||| &5' -----AGCTGTAAAAGCTTCA- 3' Trim15 mmu-miR-667 beg:128 end:148 pic:3' GAACCCGACCCACCGTCCACAGT 5'& || ||| | |||||||| &5' -----GCGGGGAAG-AGGTGTCA 3' Trim15 mmu-miR-378 beg:168 end:182 pic:3' GGAAGACTGAGGTTCAGGTCA 5'& ||||||||||| &5' ----------CCAAGTCCAGT 3' Trim15 mmu-miR-134 beg:401 end:420 pic:3' GGGGAGACCAGTTGGTCAGTGT 5'& || || | .||||||| &5' -CCAA--GG-CT-TCAGTCAC- 3' Trim15 mmu-miR-145star beg:724 end:739 pic:3' GTTCTTGTCATAAAGGTCCTTA 5'& .||| ||||||| &5' -------GGTAA--CCAGGAA- 3' Trim15 mmu-miR-669h-5p beg:317 end:333 pic:3' CGTGAGTTGATATGTG---GGTACGTA 5'& ||| ||||||| &5' -------------CACCTGCCATGCA- 3' Trim15 mmu-miR-488 beg:561 end:580 pic:3' CTGGTTCTTTG-TC-GGAAAGTT 5'& | |.| || ||||||| &5' ------GTAGCAAGTCCTTTCA- 3' Trim15 mmu-miR-1935 beg:448 end:467 pic:3' TCTCTAGGCGGTC--GGAGACGGA 5'& |. || ||||||||| &5' --------GTAAGTTCCTCTGCCT 3' Trim15 mmu-miR-1906 beg:0 end:16 pic:3' TCGGGACGGAGTCCGACGACGT 5'& | |||. |||||||| &5' -GTACTGT-----GCTGCTGC- 3' Trim15 mmu-miR-686 beg:678 end:690 pic:3' AGAAGTGGCAGACCCTTCGTTA 5'& ||||||||| &5' ------------GGGAAGCAA- 3' Trim15 mmu-miR-3099star beg:763 end:782 pic:3' GTTCCCGACCTTC-CTTCGACC 5'& .|||| |||||||| &5' ------TTGGACACGAAGCTGG 3' Trim15 mmu-miR-1982.1 beg:239 end:251 pic:3' GACACCCTCTTGTATCCCACTCT 5'& ||||||||. &5' --------------AGGGTGAGG 3' Trim15 mmu-miR-1952 beg:473 end:489 pic:3' GTCTTCCTCCCACCTCT 5'& ||| ||||||| &5' -AGACTAA-GGTGGAG- 3' Trim15 mmu-miR-872 beg:868 end:883 pic:3' GGACTTGATTGTTCATTGGAA 5'& ||.| ||||||| &5' --------AATATGTAACCT- 3' Trim15 mmu-miR-101a beg:0 end:9 pic:3' AAGTCAATAGTGTCATGACAT 5'& |||||||. &5' -------------GTACTGTG 3' Trim15 mmu-miR-224 beg:732 end:750 pic:3' TTGCCTTGGTGATCACTGAAT 5'& |||||| |||||||. &5' ---GGAACCT---GTGACTTG 3' Trim15 mmu-miR-873 beg:573 end:592 pic:3' TCCTCTGAGTGTT--CAAGGACG 5'& .|||| ||||||| &5' ------TTCACTCCTGTTCCTG- 3' Trim15 mcmv-miR-m01-3 beg:778 end:802 pic:3' AGCTC--CGTTGTCAGCGAAGTGGC 5'& ||| || |||| ||||||.| &5' --GAGATGCTACAGG-GCTTCATC- 3' Trim15 mcmv-miR-m01-3star beg:441 end:462 pic:3' CGGCACTTCGCTCGCAAGGAGC 5'& |.| |||. ||||||| &5' -CTGGAAAGTAA--GTTCCTC- 3' Trim15 mcmv-miR-m108-1 beg:60 end:82 pic:3' GCTGTGCTCGGT--GGCAGTCTTT 5'& | ||| || || ||||||| &5' -GTCACT--CCTGTCCTTCAGAAA 3' Trim15 mcmv-miR-m21-1 beg:444 end:464 pic:3' GCCGAACTTGCACAGGGGATA 5'& || || |||.||. &5' -GGAAAGTAAGT-TCCTCTG- 3' Trim15 mcmv-miR-m88-1 beg:758 end:781 pic:3' TCTGGGG--CTGTAGCTGAAGAC 5'& |||... |||| ||| ||| &5' -GACTTTTGGACA-CGAAG-CTG 3' Trim15 mghv-miR-M1-3 beg:822 end:842 pic:3' TTCGCGTTGAGGACGAGTGGAG 5'& || ||.| |||||..| &5' ----GCCCCTTCAGCTCATTT- 3' Trim15 mghv-miR-M1-5 beg:822 end:838 pic:3' CTCTGCTGGGCTAGAGTTGAGA 5'& .||| .|||.||| &5' ------GCCCC--TTCAGCTC- 3' Trim15 mghv-miR-M1-9 beg:353 end:370 pic:3' TTTTTCCAGGTC-CGTTTACACT 5'& ||| |.|.|||||| &5' ---------CAGTGTAGATGTGA 3' Trim15 mmu-miR-106b beg:16 end:37 pic:3' TAGAC--GTGACAGTCGTGAAAT 5'& |||| |||| ||||||| &5' -TCTGGCCACTT----CACTTTA 3' Trim15 mmu-miR-1188 beg:383 end:407 pic:3' AGGACCGGGTT--GGAGTGTGGT 5'& ||| || || ||||||| &5' -CCTTGCAAATGTCC-CACACCA 3' Trim15 mmu-miR-1193 beg:588 end:604 pic:3' CTATCATTTTGC-CCACTGGAT 5'& ..|| |||||.|| &5' -------GGACACGGTGATCT- 3' Trim15 mmu-miR-1197 beg:625 end:645 pic:3' TCTTCATCTGGTACACAGGAT 5'& |.| ||.| ||||||| &5' --AGGAAGGCAT--TGTCCTA 3' Trim15 mmu-miR-125bstar beg:729 end:751 pic:3' TCCAGGGTTCTTGG--ACTGAACA 5'& |||.||||| |||||||| &5' -----CCAGGAACCTGTGACTTGT 3' Trim15 mmu-miR-1274a beg:246 end:267 pic:3' ACCGCGGACTTGTCCCTGGACT 5'& || | || .|| |||||||| &5' -GGGGA-TG-GCA-GGACCTGA 3' Trim15 mmu-miR-129-5p beg:679 end:707 pic:3' CGTTCGG--GTC---TGGCGTTTTTC 5'& | |||| || .|.|.||||. &5' GGAAGCAAACAAAAAGCTGTAAAAG- 3' Trim15 mmu-miR-1306 beg:644 end:671 pic:3' GTAGTGGTGGT-------CTCGGTTGCA 5'& ||||| || |||.|||.| &5' ---CACCAGCAAAGCTATGAGTCAATG- 3' Trim15 mmu-miR-135a beg:273 end:293 pic:3' AGTGTATCCTT--ATTT-TTCGGTAT 5'& ||| |. ..|||||| &5' -------GGACATTGTCTGGGCCATA 3' Trim15 mmu-miR-135b beg:273 end:293 pic:3' AGTGTATCCTT--ACTT-TTCGGTAT 5'& ||| || ..|||||| &5' -------GGACATTGTCTGGGCCATA 3' Trim15 mmu-miR-136 beg:472 end:489 pic:3' GGTAGTAGTTTTG--TTTACCTCA 5'& ||.|| |..||||| &5' --------AAGACTAAGGTGGAG- 3' Trim15 mmu-miR-136 beg:595 end:617 pic:3' GGTAGTAGTTTTGTTTACCTCA 5'& | .| ||| .||||||| &5' CGGTGATCTCTCTGAATGGAG- 3' Trim15 mmu-miR-138 beg:634 end:654 pic:3' GCCGGACTAAGTGTTGTGGTCGA 5'& .|| .|||||||| &5' ----TTGTCCTA-GACACCAGC- 3' Trim15 mmu-miR-145star beg:611 end:633 pic:3' GTTCTT-GTCATAAAGGTCCTTA 5'& .|||. ||| |||||| &5' -GAGAGCCAGCAGA--CAGGAA- 3' Trim15 mmu-miR-150 beg:362 end:384 pic:3' GTGACCATGTTCCCAACCCTCT 5'& || || ||| ||||||| &5' ---TGTGACCAGGTGTGGGAGA 3' Trim15 mmu-miR-154 beg:868 end:883 pic:3' GCTTCCGTTGTGCCTATTGGAT 5'& ||.|.| ||||||| &5' -------AATATG--TAACCTA 3' Trim15 mmu-miR-15a beg:2 end:14 pic:3' GTGTTTGGTAATACACGACGAT 5'& |||||||||. &5' ------------TGTGCTGCTG 3' Trim15 mmu-miR-15b beg:2 end:14 pic:3' ACATTTGGTACTACACGACGAT 5'& |||||||||. &5' ------------TGTGCTGCTG 3' Trim15 mmu-miR-16 beg:0 end:14 pic:3' GCGGTTATAAATG-CACGACGAT 5'& ||| ||||||||. &5' ----------TACTGTGCTGCTG 3' Trim15 mmu-miR-1839-5p beg:452 end:467 pic:3' GTTCTGGACAAGATAGATGGAA 5'& |||| |||.||| &5' --------GTTCC-TCTGCCT- 3' Trim15 mmu-miR-184 beg:523 end:540 pic:3' TGGGAATAGTCAAGAGGCAGGT 5'& |||| |||.|||| &5' ACCCAG-------CTCTGTCC- 3' Trim15 mmu-miR-188-3p beg:362 end:383 pic:3' ACGTTTGGGACGTACACCCTC 5'& || | || .|||||||| &5' TGTGA-CCAG--GTGTGGGAG 3' Trim15 mmu-miR-188-5p beg:227 end:256 pic:3' GGG------AGGTGGTACGTTCCCTAC 5'& ||| |||| .|| |.|||||| &5' CCCTAAGTGTCCAGGGTG-AGGGGATG 3' Trim15 mmu-miR-18a beg:16 end:37 pic:3' GATAGAC--GTGATCTACGTGGAAT 5'& |||| |||| |||.||| &5' ---TCTGGCCACTT----CACTTTA 3' Trim15 mmu-miR-18b beg:17 end:37 pic:3' GATTGTCGTGATCTACGTGGAAT 5'& ||..| |||| |||.||| &5' CTGGC--CACTT----CACTTTA 3' Trim15 mmu-miR-1907 beg:1 end:21 pic:3' TGGAGGTCTAGGA-GACGACGAG 5'& |. .| || ||||||.|| &5' ----CT--GTGCTGCTGCTGTTC 3' Trim15 mmu-miR-1928 beg:551 end:569 pic:3' CTCGACCGTTACATCGA 5'& |.| .|||||| &5' GGGAATCTTGTGTAGC- 3' Trim15 mmu-miR-1929 beg:636 end:647 pic:3' GAGACGAGATATTTCAGGATCTT 5'& |||||||| &5' --------------GTCCTAGA- 3' Trim15 mmu-miR-1938 beg:429 end:445 pic:3' CTGGCTTGATGTTCAGGGTGGC 5'& ||| ||| ||||||| &5' -ACC---CTA----TCCCACC- 3' Trim15 mmu-miR-1940 beg:55 end:78 pic:3' TTGACGAGGTGGAAGAGTCAGGAGGTA 5'& |.|||. | ||| |||||.|| &5' AGCTGTCACTCCT-----GTCCTTCA- 3' Trim15 mmu-miR-195 beg:1 end:14 pic:3' CGGTTATAAAGACACGACGAT 5'& ||||||||||. &5' ----------CTGTGCTGCTG 3' Trim15 mmu-miR-1963 beg:627 end:645 pic:3' CTTCCGGAGTACTAGAGCAGGGT 5'& |||||| |.||||.| &5' GAAGGCA--------TTGTCCTA 3' Trim15 mmu-miR-1968 beg:194 end:215 pic:3' TCAGGTGGTAGGAATTGTCGACGT 5'& ||||. |..|.|||||| &5' ---CCACTTGAG-TGGCGGCTGCA 3' Trim15 mmu-miR-1968 beg:39 end:63 pic:3' TCAGGTGGTAGGAAT---TGTCGACGT 5'& || ||||| |||||||. &5' ----CAA-ATCCTCAGACACAGCTGT- 3' Trim15 mmu-miR-1981 beg:452 end:474 pic:3' CGGTGCAGATTCGGGTCGGAAATG 5'& |. | ||| |||. ||||||. &5' GTTCC-TCT--GCCT-GCCTTTG- 3' Trim15 mmu-miR-1982.2 beg:239 end:249 pic:3' GACACCCTCTTGTATCCCACT 5'& ||||||| &5' --------------AGGGTGA 3' Trim15 mmu-miR-19astar beg:649 end:661 pic:3' CATCACGTTGATACGTTTTGAT 5'& |||||.||| &5' -------------GCAAAGCTA 3' Trim15 mmu-miR-204 beg:665 end:685 pic:3' TCCGTATCCTACTGTTTCCCTT 5'& ||.|||| .||||||| &5' ----ATGGGATTTGGAAGGGAA 3' Trim15 mmu-miR-20a beg:16 end:37 pic:3' GATGGAC--GTGATATTCGTGAAAT 5'& .||| |||| ||||||| &5' ---TCTGGCCACTT----CACTTTA 3' Trim15 mmu-miR-20bstar beg:715 end:727 pic:3' GATCTTCACGAGTGTGACGTCA 5'& | |||||.|| &5' -----------C-CACTGTAG- 3' Trim15 mmu-miR-211 beg:663 end:685 pic:3' TCCGTT-TCCTACTGTTTCCCTT 5'& | ||| .|||| .||||||| &5' -GTCAATGGGATTTGGAAGGGAA 3' Trim15 mmu-miR-2132 beg:312 end:328 pic:3' GTAGCGCAGTTGTGGGCGG 5'& ||| | ||||.||| &5' ----GCG-CC-CACCTGCC 3' Trim15 mmu-miR-2140 beg:399 end:421 pic:3' TGGTGGTTCT--AGAC-GTGGA 5'& |||||||. || | |||| &5' --CACCAAGGCTTCAGTCACC- 3' Trim15 mmu-miR-2145 beg:365 end:392 pic:3' TTGGTCCGGG------CTGGGACGA 5'& .||||||. . ||||.||| &5' GACCAGGTGTGGGAGAGACCTTGC- 3' Trim15 mmu-miR-21star beg:1 end:20 pic:3' CTGTCGGGTA-GCTGACGACAAC 5'& |..| | .|||||||| &5' ------CTGTGCTGCTGCTGTT- 3' Trim15 mmu-miR-221 beg:611 end:636 pic:3' CTTTGGGTCGTCTGTTACATCGA 5'& ||.| ||||||||||. .|| &5' GAGAGCCAGCAGACAGGAAGGC- 3' Trim15 mmu-miR-27a beg:176 end:193 pic:3' CGCCTTGAATC-GGT--GACACTT 5'& || || |||||| &5' ---------AGTCCTCTCTGTGA- 3' Trim15 mmu-miR-27b beg:730 end:746 pic:3' CGTCTTGAATCGGTGACACTT 5'& |||.| | |||||| &5' -CAGGAA-----C-CTGTGA- 3' Trim15 mmu-miR-296-3p beg:516 end:536 pic:3' CCTCTCGGAGG--TGGGTTGGGAG 5'& |||. |||||.|.|| &5' ------CCTTGGAACCCAGCTCT- 3' Trim15 mmu-miR-298 beg:443 end:466 pic:3' CCCTTCTTGTCGGGAGGAGACGG 5'& |||| ||. ||||||||| &5' -GGAAAGTAAGT--TCCTCTGCC 3' Trim15 mmu-miR-29bstar beg:615 end:624 pic:3' ATTTGGTGGTATACTTTGGTCG 5'& .|.||||| &5' --------------GAGCCAGC 3' Trim15 mmu-miR-327 beg:58 end:79 pic:3' TAG-GAGTACGGGGAGTTCA 5'& .|| ||| ||.||.|||. &5' GTCACTCCTGTCCTTCAG-- 3' Trim15 mmu-miR-328 beg:269 end:291 pic:3' TGCCTTCCCGTCTCT--CCCGGTC 5'& |||| || | |||||| &5' ----AAGGACATTGTCTGGGCCA- 3' Trim15 mmu-miR-331-5p beg:825 end:847 pic:3' CCTAGGGACCCTGGT---ATGGATC 5'& |||| .|. ||.||| &5' ----CCCTTCAGCTCATTTATCTA- 3' Trim15 mmu-miR-342-5p beg:45 end:70 pic:3' GAGTTAGTGTCTATCGTGGGGA 5'& ||||. ||||| |. |||.||| &5' CTCAGACACAGCTGTCACTCCT 3' Trim15 mmu-miR-342-5p beg:501 end:523 pic:3' GAGTTAGTGTCTATCGTGGGGA 5'& ||. |||| |||||||.| &5' --CAGACACACC-AGCACCCTT 3' Trim15 mmu-miR-346 beg:488 end:510 pic:3' TCTCCGTCCGTGAGC-CCGTCTGT 5'& | |||| | .| |||||||| &5' ---GCCAGGGAAATGCGGCAGACA 3' Trim15 mmu-miR-3470b beg:228 end:249 pic:3' GGTCGGAC-CAGATGTCTCACT 5'& ||| || | |||.|||| &5' ----CCTAAGTGTCCAGGGTGA 3' Trim15 mmu-miR-384-3p beg:75 end:96 pic:3' TAACAC-TTGTTAAA-GATCCTTA 5'& | ||||. ||||||| &5' -----GAAACAGAAGCCTAGGAA- 3' Trim15 mmu-miR-433 beg:201 end:222 pic:3' TGTGGCTCC-TCGG-GTAGTACTA 5'& | || .||. |||||||| &5' -----GTGGCGGCTGCATCATGA- 3' Trim15 mmu-miR-450a-3p beg:35 end:52 pic:3' TACTTACGTTTCGTAGGGGTTA 5'& ||| ||| ||||.||. &5' --GAAA-CAA---ATCCTCAG- 3' Trim15 mmu-miR-453 beg:716 end:734 pic:3' ACGTTCGAGTGATACTCCGTTGGA 5'& ||||.| ||.|||| &5' --------CACTGTAGGGTAACC- 3' Trim15 mmu-miR-470 beg:480 end:497 pic:3' TGAGTGGTCACGGTCAGGTTCTT 5'& .||| || |||.|.| &5' -------GGTGG-AG-CCAGGGA 3' Trim15 mmu-miR-488star beg:270 end:288 pic:3' AACTCTCACGATAATAGACCC 5'& || | |||.|||||| &5' -----AGGAC-ATTGTCTGGG 3' Trim15 mmu-miR-497 beg:0 end:18 pic:3' ATGTTTGGTGTCAC-ACGACGAC 5'& .|| ||| |||||||| &5' -------TACTGTGCTGCTGCTG 3' Trim15 mmu-miR-501-5p beg:234 end:255 pic:3' AAAGTGGGTCCCTGTTTCCTAA 5'& . |||||| |..|||| &5' ---TGTCCAGGGTGAGGGGAT- 3' Trim15 mmu-miR-503 beg:0 end:18 pic:3' GACGTCATGACAAGGGCGACGAT 5'& ||||||| |.||||||. &5' -----GTACTGTG-CTGCTGCTG 3' Trim15 mmu-miR-511 beg:619 end:638 pic:3' ACTCACGTCTCGTTTTCCGTA 5'& ||||| ..||||||| &5' -----GCAGACAGGAAGGCAT 3' Trim15 mmu-miR-532-3p beg:362 end:383 pic:3' ACGTTCGGAACCCACACCCTCC 5'& || | || |||||||||| &5' TGTGA-CCA--GGTGTGGGAG- 3' Trim15 mmu-miR-540-3p beg:15 end:26 pic:3' GGTCCTAGCTGGAGACTGGA 5'& .||||.|| &5' -----------TTCTGGCC- 3' Trim15 mmu-miR-541 beg:558 end:578 pic:3' TCACACTGGTTGTAGTCTTAGGGAA 5'& |||| .|.|| |.|||.|| &5' --TGTG--TAGCA----AGTCCTTT 3' Trim15 mmu-miR-542-3p beg:46 end:66 pic:3' AAAGTCAATAGTTAGACAGTGT 5'& |||| ||. ||||||| &5' --TCAGACA-CAG-CTGTCAC- 3' Trim15 mmu-miR-543 beg:845 end:865 pic:3' TTCTTCACGTGGCG--CTTACAAA 5'& |. |.| |.|||||| &5' -------GTTCTGAGAGGATGTTT 3' Trim15 mmu-miR-592 beg:324 end:345 pic:3' TGTAGTAGCGTATAA--CTGTGTTA 5'& ||| ||| ||||||. &5' ----CAT-GCAAAAGGAGACACAG- 3' Trim15 mmu-miR-665 beg:333 end:354 pic:3' TCC-CTGGAGTCGG-AGGACCA 5'& ||| ||| ||||. ||||| &5' AGGAGACA-CAGCTGTCCTG-- 3' Trim15 mmu-miR-666-5p beg:452 end:469 pic:3' CCGAGAGTGTCGACACGGGCGA 5'& |.|| || ||||.|| &5' -GTTC------CTCTGCCTGC- 3' Trim15 mmu-miR-670 beg:479 end:497 pic:3' AAGTGGTGTATG-TGAGTCCCTA 5'& | .|. .| |||||| &5' ------AGGTGGAGC-CAGGGA- 3' Trim15 mmu-miR-673-3p beg:576 end:594 pic:3' CCACGTGTCTTGAGT-C-GGGGCCT 5'& |||| | .||.||| &5' ----------ACTCCTGTTCCTGGA 3' Trim15 mmu-miR-673-5p beg:724 end:746 pic:3' GAGGTTCC--TGGTCTC--GACACTC 5'& |.|| |||||. |||||| &5' ----AGGGTAACCAGGAACCTGTGA- 3' Trim15 mmu-miR-673-5p beg:173 end:193 pic:3' GAGGTTCCTGGTCTCGACACTC 5'& ||||. || |||||| &5' -TCCAGT--CCTCT-CTGTGA- 3' Trim15 mmu-miR-676star beg:719 end:730 pic:3' CGTTCAGGATTCCAACATCTCA 5'& |||||.|| &5' --------------TGTAGGGT 3' Trim15 mmu-miR-680 beg:768 end:789 pic:3' GGGGGTACAGTCG---TCTACGGG 5'& || | ||| ||||||. &5' ----CACGA-AGCTGGAGATGCT- 3' Trim15 mmu-miR-686 beg:84 end:99 pic:3' AGAAGTGGCAGACCCTTCGTTA 5'& .|| |||||||. &5' -----GCCTA---GGAAGCAG- 3' Trim15 mmu-miR-691 beg:615 end:633 pic:3' AAAAGACGGAGAGAAGTCCTTA 5'& ||| |||||| &5' ------GCCAGCAGACAGGAA- 3' Trim15 mmu-miR-691 beg:718 end:739 pic:3' AAAAGACGGAGAGAA-GTCCTTA 5'& |||. |||||| &5' ----CTGTAGGGTAACCAGGAA- 3' Trim15 mmu-miR-696 beg:535 end:554 pic:3' GGGTGTCGTTCGTGTGCG 5'& ||| .|||| || |.| &5' CCC-TAGCATTCAAATG- 3' Trim15 mmu-miR-696 beg:646 end:663 pic:3' GGGT-GTCG-TTCGTGTGCG 5'& || |||| |||| .|.| &5' --CACCAGCAAAGC-TATG- 3' Trim15 mmu-miR-705 beg:308 end:330 pic:3' ACGGGTG-GGGTGGAGGGTGG 5'& ||| .| ||||||| |||. &5' -GCCAGCGCCCACCTGCCAT- 3' Trim15 mmu-miR-709 beg:454 end:473 pic:3' AGGAGGACGGAGACGGAGG 5'& |||| ||||| |||||.. &5' TCCT-CTGCC--TGCCTTT 3' Trim15 mmu-miR-741 beg:587 end:608 pic:3' AGATGTATCTTA-CCG-TAGAGAGT 5'& |.|| ||. ||||||| &5' ------TGGACACGGTGATCTCTC- 3' Trim15 mmu-miR-759 beg:132 end:153 pic:3' CAGTTTTAACAAAC-GTGAGACG 5'& ..|| || ||||||| &5' ---GGAAGAGG-TGTCACTCTG- 3' Trim15 mmu-miR-760 beg:152 end:173 pic:3' AGGGGTGTCTGG-GTCTCGGC 5'& |||||||||| || |||| &5' --CCCACAGACCACAAAGCC- 3' Trim15 mmu-miR-764-5p beg:252 end:272 pic:3' TCC-TCCTGTACACTCGTGG 5'& || ||||| |||||||| &5' -GGCAGGACC--TGAGCACC 3' Trim15 mmu-miR-804 beg:367 end:393 pic:3' AGGTCCAC-TCCTTGTT-GAGTGT 5'& ||||||| .|||. .| || || &5' -CCAGGTGTGGGAGAGACCTTGCA 3' Trim15 mmu-miR-873 beg:332 end:355 pic:3' TCCTCTGAGTGTTCA-AGGACG 5'& ||||||| |||. |||||| &5' AGGAGAC--ACAGCTGTCCTGC 3' Trim15 mmu-miR-876-3p beg:703 end:724 pic:3' ACTTAATGAAACAT--TTGGTGAT 5'& .||| .||||||. &5' ------GCTTCAAAATGACCACTG 3' Trim15 mmu-miR-876-5p beg:540 end:561 pic:3' ATCAC-TAAGTGTCTCTTTAGGT 5'& | ||||| .|.||||. &5' ----GCATTCAAATGGGAATCT- 3' Trim15 mmu-miR-881 beg:580 end:600 pic:3' AGATAAGTCTTTTCTGTGTCAA 5'& ||.||| .|||||.|| &5' -CTGTTCCT---GGACACGGT- 3' Trim15 mmu-miR-881star beg:589 end:610 pic:3' TCTACACTGA--CAATAGAGAGAC 5'& ||| || ||||||||| &5' ------GACACGGTGATCTCTCTG 3' Trim15 mmu-miR-882 beg:593 end:609 pic:3' TGATTACGCGATTGAGAGAGGA 5'& || |.| ||||||. &5' -------CGGTGA-TCTCTCT- 3' Trim15 mmu-miR-99bstar beg:149 end:172 pic:3' GCCTGGGTGTCT-GTGC-TCGAAC 5'& ||||||||||| ||| ||| &5' -GGACCCACAGACCACAAAGC--- 3' Trim15 mcmv-miR-m21-1 beg:219 end:235 pic:3' GCCGAACTTGCACAGGGGATA 5'& |||.| |||||||| &5' ------GAATG-GTCCCCTA- 3'

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Trim15 RAID00015360 mmu-miR-8091 miRNA MIMAT0031392 Trim15 mRNA 69097 Prediction 0.1828 Trim15 RAID00015733 mmu-miR-542-3p miRNA MIMAT0003172 Trim15 mRNA 69097 Prediction 0.1828 Trim15 RAID00156016 mmu-miR-7087-5p miRNA MIMAT0028080 Trim15 mRNA 69097 Prediction 0.1828 Trim15 RAID00189000 mmu-miR-17-5p miRNA MIMAT0000649 Trim15 mRNA 69097 Prediction 0.1828 Trim15 RAID00271821 mmu-miR-146b-5p miRNA MIMAT0003475 Trim15 mRNA 69097 Prediction 0.1828 Trim15 RAID00310695 mmu-miR-224-5p miRNA MIMAT0000671 Trim15 mRNA 69097 Prediction 0.1828 Trim15 RAID00352467 mmu-miR-23a-5p miRNA MIMAT0017019 Trim15 mRNA 69097 Prediction 0.1828 Trim15 RAID00419282 mmu-miR-136-5p miRNA MIMAT0000148 Trim15 mRNA 69097 Prediction 0.1828 Trim15 RAID00546423 mmu-miR-130b-3p miRNA MIMAT0000387 Trim15 mRNA 69097 Prediction 0.1828 Trim15 RAID00573684 mmu-miR-93-5p miRNA MIMAT0000540 Trim15 mRNA 69097 Prediction 0.1828 Trim15 RAID00599895 mmu-miR-101a-3p miRNA MIMAT0000133 Trim15 mRNA 69097 Prediction 0.1828 Trim15 RAID00621947 mmu-miR-134-5p miRNA MIMAT0000146 Trim15 mRNA 69097 Prediction 0.1828 Trim15 RAID00651986 mmu-miR-7032-3p miRNA MIMAT0027969 Trim15 mRNA 69097 Prediction 0.1828 Trim15 RAID00659027 mmu-miR-146a-5p miRNA MIMAT0000158 Trim15 mRNA 69097 Prediction 0.1828 Trim15 RAID00879590 mmu-miR-20a-5p miRNA MIMAT0000529 Trim15 mRNA 69097 Prediction 0.1828 Trim15 RAID01031836 mmu-miR-6963-5p miRNA MIMAT0027826 Trim15 mRNA 69097 Prediction 0.1828 Trim15 RAID01161006 mmu-miR-16-5p miRNA MIMAT0000527 Trim15 mRNA 69097 Prediction 0.1828 Trim15 RAID01184724 mmu-miR-106a-5p miRNA MIMAT0000385 Trim15 mRNA 69097 Prediction 0.1828 Trim15 RAID01244313 mmu-miR-15a-5p miRNA MIMAT0000526 Trim15 mRNA 69097 Prediction 0.1828 Trim15 RAID01346585 mmu-miR-101b-3p miRNA MIMAT0000616 Trim15 mRNA 69097 Prediction 0.1828 Trim15 RAID01374266 mmu-miR-138-5p miRNA MIMAT0000150 Trim15 mRNA 69097 Prediction 0.2202 Trim15 RAID01420410 mmu-miR-378a-3p miRNA MIMAT0003151 Trim15 mRNA 69097 Prediction 0.1828 Trim15 RAID01430015 mmu-miR-154-5p miRNA MIMAT0000164 Trim15 mRNA 69097 Prediction 0.1828 Trim15 RAID01513684 mmu-miR-7656-5p miRNA MIMAT0029818 Trim15 mRNA 69097 Prediction 0.1828 Trim15 RAID01600912 mmu-miR-195a-5p miRNA MIMAT0000225 Trim15 mRNA 69097 Prediction 0.1828 Trim15 RAID01881264 mmu-miR-873a-5p miRNA MIMAT0004936 Trim15 mRNA 69097 Prediction 0.1828 Trim15 RAID02038722 mmu-miR-322-5p miRNA MIMAT0000548 Trim15 mRNA 69097 Prediction 0.1828 Trim15 RAID02144648 mmu-miR-497a-5p miRNA MIMAT0003453 Trim15 mRNA 69097 Prediction 0.1828 Trim15 RAID02284450 mmu-miR-7049-5p miRNA MIMAT0028002 Trim15 mRNA 69097 Prediction 0.1828 Trim15 RAID02380751 mmu-miR-7223-5p miRNA MIMAT0028414 Trim15 mRNA 69097 Prediction 0.1828 Trim15 RAID02545038 mmu-miR-15b-5p miRNA MIMAT0000124 Trim15 mRNA 69097 Prediction 0.1828 Trim15 RAID02557229 mmu-miR-130a-3p miRNA MIMAT0000141 Trim15 mRNA 69097 Prediction 0.1828 Trim15 RAID02807961 mmu-miR-721 miRNA MIMAT0003515 Trim15 mRNA 69097 Prediction 0.1828 Trim15 RAID02824320 mmu-miR-346-5p miRNA MIMAT0000597 Trim15 mRNA 69097 Prediction 0.1828 Trim15 RAID02862016 mmu-miR-139-5p miRNA MIMAT0000656 Trim15 mRNA 69097 Prediction 0.1828 Trim15 RAID03021467 mmu-miR-20b-5p miRNA MIMAT0003187 Trim15 mRNA 69097 Prediction 0.1828 Trim15 RAID03028222 mmu-miR-7211-3p miRNA MIMAT0028391 Trim15 mRNA 69097 Prediction 0.1828 Trim15 RAID03113554 mmu-miR-106b-5p miRNA MIMAT0000386 Trim15 mRNA 69097 Prediction 0.1828 Trim15 RAID03327215 mmu-miR-488-3p miRNA MIMAT0003450 Trim15 mRNA 69097 Prediction 0.1828 Trim15 RAID03955458 mmu-miR-149-5p miRNA MIMAT0000159 Trim15 mRNA 69097 Prediction 0.1828