DNA & RNA Element - microRNA |
Mirbase Acc | miRNA Name | Gene ID | Gene Symbol | miRNA Alignment | Alignment | Gene Alignment | miRNA Start | miRNA End | Gene Start | Gene End | Genome Coordinates | Conservation | Align Score | Seed Cat | Energy | mirSVR Score |
MIMAT0004523 | mmu-miR-29b* | 244178 | Ubqln3 | auUUGGUGGUAUACUUUGGUcg | |:|::| ||| |||||| | acAGCUGCACUAU-AAACCAaa | 3 | 21 | 82 | 102 | [mm9:7:111289317-111289337:-] | 0.6334 | 138 | 0 | -11.51 | -0.3133 |
MIMAT0004533 | mmu-miR-141* | 244178 | Ubqln3 | agguugugacgugaCCUUCUAc | ||||||| | ucuggagucaauaaGGAAGAUg | 2 | 9 | 136 | 157 | [mm9:7:111289262-111289283:-] | 0.6334 | 140 | 7 | -16.07 | -1.0671 |
MIMAT0004537 | mmu-miR-154* | 244178 | Ubqln3 | uuauccaguuggcacAUACUAa | |||||| | uauaaaccaaauuacUAUGAUg | 2 | 8 | 92 | 113 | [mm9:7:111289306-111289327:-] | 0.6334 | 120 | 6 | -5.67 | -0.2406 |
MIMAT0000374 | mmu-miR-296-5p | 244178 | Ubqln3 | uguccuAACUCCCCCCCGGGa | || | ||||||| | cacucuUUUACCUGGGGCCCu | 2 | 16 | 206 | 226 | [mm9:7:111289193-111289213:-] | 0.6465 | 143 | 7 | -18.26 | -1.0187 |
MIMAT0000377 | mmu-miR-299* | 244178 | Ubqln3 | uacauacacccugccAUUUGGu | |||||| | aauacagcugcacuaUAAACCa | 2 | 8 | 79 | 100 | [mm9:7:111289319-111289340:-] | 0.6334 | 120 | 6 | -7.87 | -0.3044 |
MIMAT0004640 | mmu-miR-325 | 244178 | Ubqln3 | aacuauccuCCACGAGUUAUUu | || | ||||||| | caauguucuGGAG-UCAAUAAg | 2 | 14 | 130 | 150 | [mm9:7:111289269-111289289:-] | 0.6334 | 143 | 7 | -12.17 | -0.2961 |
MIMAT0003166 | mmu-miR-546 | 244178 | Ubqln3 | cuGAGGCACGGUGGua | :|: |||||||| | ucUUUAGUGCCACC-- | 3 | 15 | 269 | 282 | [mm9:7:111289137-111289150:-] | 0.6465 | 134 | 0 | -17.63 | -0.1531 |
MIMAT0003167 | mmu-miR-540-3p | 244178 | Ubqln3 | ggucCUAGCUGGAGAC-UGGa | || :|| :|||| ||| | ccuuGAAUGAGUUCUGUACCu | 2 | 17 | 224 | 244 | [mm9:7:111289175-111289195:-] | 0.6465 | 120 | 0 | -20.88 | -1.0719 |
MIMAT0003896 | mmu-miR-763 | 244178 | Ubqln3 | cggugaccaagaaggGUCGACc | |||||| | uccuauucuugaauaCAGCUGc | 2 | 8 | 68 | 89 | [mm9:7:111289330-111289351:-] | 0.6334 | 120 | 6 | -13.31 | -0.2344 |
MIMAT0003457 | mmu-miR-680 | 244178 | Ubqln3 | ggGGGUACAGUCGUCUACGgg | ||:|| |:: |||||| | uaCCUAUCUUG--AGAUGCaa | 3 | 20 | 240 | 258 | [mm9:7:111289161-111289179:-] | 0.6465 | 132 | 0 | -14.07 | -0.1240 |
MIMAT0003498 | mmu-miR-708* | 244178 | Ubqln3 | gaucuucgagugUC-AGAUCAAc | || ||||||| | -----------gAGCUCUAGUUa | 2 | 11 | 1 | 12 | [mm9:7:111289407-111289418:-] | 0.6889 | 141 | 7 | -8.96 | -0.8608 |
MIMAT0004840 | mmu-miR-743b-3p | 244178 | Ubqln3 | agaUAAGUCGUACUAC-AGAAAg | | |:| :|||||| ||||| | ccaAAUUACUAUGAUGUUCUUUa | 2 | 20 | 98 | 120 | [mm9:7:111289299-111289321:-] | 0.6334 | 135 | 0 | -13.06 | -1.1620 |
MIMAT0004844 | mmu-miR-880 | 244178 | Ubqln3 | agaugagucucuccuACCUCAu | |||||| | guggagacaauguucUGGAGUc | 2 | 8 | 123 | 144 | [mm9:7:111289275-111289296:-] | 0.6334 | 120 | 6 | -10.33 | -0.1240 |
MIMAT0004883 | mmu-miR-466g | 244178 | Ubqln3 | acacacACGUACAC-AGACAUa | || ||| | |||||| | ggcccuUGAAUGAGUUCUGUAc | 2 | 16 | 221 | 242 | [mm9:7:111289177-111289198:-] | 0.6465 | 123 | 6 | -8.27 | -0.8680 |
MIMAT0004890 | mmu-miR-509-5p | 244178 | Ubqln3 | uacuaacGGUGUAAGACCUCAu | | |::||||||||| | guggagaCAAUGUUCUGGAGUc | 2 | 16 | 123 | 144 | [mm9:7:111289275-111289296:-] | 0.6334 | 159 | 7 | -17.37 | -1.0318 |
MIMAT0004935 | mmu-miR-872* | 244178 | Ubqln3 | ucCUCCGAUGACGUUA-UCAAGu | |:||| :|| ||| ||||| | cuGGGGCCCUUG-AAUGAGUUCu | 2 | 21 | 217 | 238 | [mm9:7:111289181-111289202:-] | 0.6465 | 126 | 0 | -16.79 | -0.8692 |
MIMAT0005291 | mmu-miR-582-5p | 244178 | Ubqln3 | ucauUGAC-CAACUUGUUGACAu | :||| || ||||||| | ggauGCUGUGUAAUCCAACUGUg | 2 | 19 | 178 | 200 | [mm9:7:111289219-111289241:-] | 0.6334 | 145 | 7 | -15.60 | -0.2778 |
MIMAT0005847 | mmu-miR-1190 | 244178 | Ubqln3 | cugucuccccuuggaGUCGACu | |||||| | uccuauucuugaauaCAGCUGc | 2 | 8 | 68 | 89 | [mm9:7:111289330-111289351:-] | 0.6334 | 120 | 6 | -11.76 | -0.2387 |
MIMAT0009423 | mmu-miR-1952 | 244178 | Ubqln3 | gucuuccuccCACCUCu | |||||| | guucuuuacuGUGGAGa | 2 | 8 | 113 | 129 | [mm9:7:111289290-111289306:-] | 0.6334 | 120 | 6 | -11.37 | -0.1185 |
MIMAT0009424 | mmu-miR-1953 | 244178 | Ubqln3 | gucuucggacucuuGAAAGGGu | ||||||| | cuuuuccuuucugcCUUUCCCc | 2 | 9 | 25 | 46 | [mm9:7:111289373-111289394:-] | 0.6334 | 140 | 7 | -13.24 | -0.6265 |
MIMAT0009441 | mmu-miR-1968 | 244178 | Ubqln3 | ucAGGUGGUAGGAAU---UGUCGACGu | ||: |:||:|||: |||||||| | guUCUCCUAUUCUUGAAUACAGCUGCa | 2 | 23 | 64 | 90 | [mm9:7:111289329-111289355:-] | 0.6334 | 169 | 7 | -28.37 | -1.3205 |
MIMAT0009461 | mmu-miR-1982.2 | 244178 | Ubqln3 | gacacccUCUUGUAUCCCACu | |||| |||||||| | agaagccAGAA-AUAGGGUGg | 2 | 15 | 158 | 177 | [mm9:7:111289242-111289261:-] | 0.6334 | 156 | 7 | -17.45 | -0.6210 |
MIMAT0011216 | mmu-miR-2140 | 244178 | Ubqln3 | uggugguUCUAGACGUGGa | | | ||||||: | cuugaauACAGCUGCACUa | 2 | 13 | 75 | 93 | [mm9:7:111289326-111289344:-] | 0.6334 | 128 | 0 | -10.50 | -0.2556 |
MIMAT0011222 | mmu-miR-2146 | 244178 | Ubqln3 | guguaccuUGGG---AAGAGGug | |||| |||||| | gucuuauuACCCUAGUUCUCCua | 3 | 13 | 50 | 72 | [mm9:7:111289347-111289369:-] | 0.6334 | 123 | 0 | -13.99 | -0.1475 |
MIMAT0000141 | mmu-miR-130a | 244178 | Ubqln3 | uacGGGAAAAU-UGU-AACGUGAc | ::||| | ||| |||||| | cuaUUCUUGAAUACAGCUGCACUa | 2 | 20 | 70 | 93 | [mm9:7:111289326-111289349:-] | 0.6334 | 121 | 6 | -13.44 | -0.2780 |
MIMAT0000142 | mmu-miR-9 | 244178 | Ubqln3 | agUAUGUCGAU---CUA-UUGGUUUcu | ||||||||: || ||||||| | gaAUACAGCUGCACUAUAAACCAAAuu | 3 | 22 | 78 | 104 | [mm9:7:111289315-111289341:-] | 0.6334 | 147 | 0 | -16.90 | -0.1443 |
MIMAT0000149 | mmu-miR-137 | 244178 | Ubqln3 | gaugcgcAUAAGAAUUC-GUUAUu | |:|||| :|| ||||| | gagacaaUGUUCUGGAGUCAAUAa | 2 | 17 | 126 | 149 | [mm9:7:111289270-111289293:-] | 0.6334 | 128 | 0 | -11.95 | -0.8258 |
MIMAT0000158 | mmu-miR-146a | 244178 | Ubqln3 | uuGGGUAC--CUUAA----GUCAAGAGu | |||||| ||| :||||||| | ccCCCAUGUCUUAUUACCCUAGUUCUCc | 2 | 21 | 43 | 70 | [mm9:7:111289349-111289376:-] | 0.6334 | 146 | 7 | -18.93 | -1.0305 |
MIMAT0000212 | mmu-miR-183 | 244178 | Ubqln3 | ucacuUAAGAUGGUCACGGUau | | ||| ::||||||| | cauccAGUCU-UUAGUGCCAcc | 3 | 18 | 262 | 282 | [mm9:7:111289137-111289157:-] | 0.6465 | 135 | 0 | -14.53 | -0.1444 |
MIMAT0000215 | mmu-miR-186 | 244178 | Ubqln3 | ucgGGUUU--UCCU-CU-UAAGAAAc | ||||| | | || :|||||| | aaaCCAAAUUACUAUGAUGUUCUUUa | 2 | 20 | 95 | 120 | [mm9:7:111289299-111289324:-] | 0.6334 | 132 | 6 | -9.94 | -0.1607 |
MIMAT0000215 | mmu-miR-186 | 244178 | Ubqln3 | ucggguuuuccucuUAAGAAac | |||||| | acccuaguucuccuAUUCUUga | 3 | 9 | 58 | 79 | [mm9:7:111289340-111289361:-] | 0.6334 | 120 | 0 | -10.76 | -0.1409 |
MIMAT0000379 | mmu-miR-301a | 244178 | Ubqln3 | cgaAACUGUUAUGAUAACGUGAc | ||| ||||| : |||||| | uucUUG--AAUACAGCUGCACUa | 2 | 21 | 73 | 93 | [mm9:7:111289326-111289346:-] | 0.6334 | 133 | 6 | -11.86 | -0.2756 |
MIMAT0000387 | mmu-miR-130b | 244178 | Ubqln3 | uacGGGAAAGUA-GU-AACGUGAc | ::||| || || |||||| | cuaUUCUUGAAUACAGCUGCACUa | 2 | 20 | 70 | 93 | [mm9:7:111289326-111289349:-] | 0.6334 | 121 | 6 | -13.19 | -0.2780 |
MIMAT0000534 | mmu-miR-26b | 244178 | Ubqln3 | uggAUAGGACUUAAUGA-ACUu | || | ||||||| ||| | cuaUAAACCAAAUUACUAUGAu | 2 | 19 | 91 | 112 | [mm9:7:111289307-111289328:-] | 0.6334 | 122 | 0 | -9.50 | -1.1265 |
MIMAT0000541 | mmu-miR-96 | 244178 | Ubqln3 | ucguuuUUACACGAUCACGGUuu | |:| | :|||||||| | acauccAGUCU-UUAGUGCCAcc | 3 | 18 | 261 | 282 | [mm9:7:111289137-111289158:-] | 0.6465 | 135 | 0 | -13.34 | -0.1473 |
MIMAT0000555 | mmu-miR-324-5p | 244178 | Ubqln3 | ugugguuacgggauCCCCUACGc | |||||||| | gccagaaauaggguGGGGAUGCu | 2 | 10 | 162 | 184 | [mm9:7:111289235-111289257:-] | 0.6334 | 145 | 7 | -19.29 | -0.7896 |
MIMAT0001092 | mmu-miR-376b | 244178 | Ubqln3 | uucaccuacaaggaGAUACUa | |||||| | uauaaaccaaauuaCUAUGAu | 2 | 8 | 92 | 112 | [mm9:7:111289307-111289327:-] | 0.6334 | 120 | 6 | -9.58 | -0.1381 |
MIMAT0004186 | mmu-miR-301b | 244178 | Ubqln3 | cgaAACUGUUAUGGUAACGUGAc | ||| ||||| : |||||| | uucUUG--AAUACAGCUGCACUa | 2 | 21 | 73 | 93 | [mm9:7:111289326-111289346:-] | 0.6334 | 133 | 6 | -12.98 | -0.2756 |
MIMAT0003475 | mmu-miR-146b | 244178 | Ubqln3 | ucGGAUACCUUAAGUCAAGAGu | |:||| | :||||||| | guCUUAU-UACCCUAGUUCUCc | 2 | 21 | 50 | 70 | [mm9:7:111289349-111289369:-] | 0.6334 | 146 | 7 | -12.82 | -1.0305 |
MIMAT0003515 | mmu-miR-721 | 244178 | Ubqln3 | aagggggaaaauuaACGUGAc | |||||| | uucuugaauacagcUGCACUa | 2 | 8 | 73 | 93 | [mm9:7:111289326-111289346:-] | 0.6334 | 120 | 6 | -9.19 | -0.2878 |
MIMAT0004895 | mmu-miR-590-5p | 244178 | Ubqln3 | gacguGA-AAAUACUUAU-UCGAg | || || |||||| |||| | uucucCUAUUCUUGAAUACAGCUg | 2 | 18 | 65 | 88 | [mm9:7:111289331-111289354:-] | 0.6334 | 124 | 0 | -9.39 | -1.1509 |