DNA & RNA Element - AREsite Gene Name Motif CDS Area ARE Area Evidence Trim32 ATTTA 132-2099 3107-3111 Identification of a target RNA motif for RNA-binding protein HuR.#Proc Natl Acad Sci U S A 2004; 101(9): 2987-92.!

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004527 mmu-miR-124* 69807 Trim32 uaguuCCAGGCGACACUUGUGc || : |: ||||||| uaguuGGAUAGUGUUGAACACu 2 18 681 702 [mm9:4:65276890-65276911:+] 0.5901 145 7 -10.92 -0.5394 MIMAT0000137 mmu-miR-126-5p 69807 Trim32 gcgcAUGGUUUUCAUUAUUac || :||||||||||| aaacUAAUAAAAGUAAUAAcu 3 18 1033 1053 [mm9:4:65277242-65277262:+] 0.5901 153 0 -10.31 -0.1235 MIMAT0000143 mmu-miR-9* 69807 Trim32 ugAAAGC-CAAUAGAUCGAAAUa ||| | | | | ||||||| acUUUAGAGCU-UAGAGCUUUAc 2 21 205 226 [mm9:4:65276414-65276435:+] 0.5696 145 7 -10.59 -0.1508 MIMAT0003473 mmu-miR-133a* 69807 Trim32 uaAACCAAGGUAAAAUGGUCg || | || |||||||| ccUUUGAUCACCUUUACCAGu 2 20 527 547 [mm9:4:65276736-65276756:+] 0.5696 155 7 -13.33 -0.5187 MIMAT0003473 mmu-miR-133a* 69807 Trim32 uaaaccaagguaAAAUGGUCg |||||||| agagcuuagagcUUUACCAGg 2 10 210 230 [mm9:4:65276419-65276439:+] 0.5696 145 7 -11.22 -0.4896 MIMAT0004541 mmu-miR-188-3p 69807 Trim32 acGUUUGGGACG--UACACCCUc || |:|| || |||||||| aaCAUAUCCAGCAAAUGUGGGAu 2 20 792 814 [mm9:4:65277001-65277023:+] 0.5901 162 7 -20.70 -0.8350 MIMAT0004547 mmu-miR-203* 69807 Trim32 acaacuugacagUUCUUGGUGa :|||||||| ggcuuuaguaaaGAGAACCACu 2 11 297 318 [mm9:4:65276506-65276527:+] 0.5696 146 7 -16.69 -0.9274 MIMAT0000367 mmu-miR-291a-5p 69807 Trim32 ucUC-UCCCGGAGGUGAAACUAc || | | : ||: ||||||| guAGCAUGAUGUCUCCUUUGAUc 2 21 513 535 [mm9:4:65276722-65276744:+] 0.5696 151 7 -12.04 -0.1607 MIMAT0000367 mmu-miR-291a-5p 69807 Trim32 ucucucccgGAGGUGAAACUac :|: ||||||| ugcauauugUUUGACUUUGAga 3 14 987 1008 [mm9:4:65277196-65277217:+] 0.5901 129 0 -10.74 -0.1218 MIMAT0004574 mmu-miR-294* 69807 Trim32 ucUAUCCCGGAGGUAAAACUCa ||| | :|: | |||||| gcAUAUUG-UUUGACUUUGAGa 2 21 988 1008 [mm9:4:65277197-65277217:+] 0.5901 122 6 -7.19 -0.1428 MIMAT0004575 mmu-miR-295* 69807 Trim32 cuucacacgggguguAAACUCa |||||| ugcauauuguuugacUUUGAGa 2 8 987 1008 [mm9:4:65277196-65277217:+] 0.5901 120 6 -11.73 -0.1414 MIMAT0004629 mmu-miR-22* 69807 Trim32 auuUCGAA-CGGUGACUUCUUGa | :|| ::||| |||||| uccAUUUUCAUUACUAAAGAACa 2 20 925 947 [mm9:4:65277134-65277156:+] 0.5901 126 6 -10.36 -0.1350 MIMAT0000551 mmu-miR-323-3p 69807 Trim32 ucuccagcUGGCACAUUACAc |::||||||||| uugaaagaAUUGUGUAAUGUg 2 14 871 891 [mm9:4:65277080-65277100:+] 0.5901 157 7 -18.83 -0.6707 MIMAT0004647 mmu-miR-338-5p 69807 Trim32 guGAG-UCGUGGUCCUAUAACAa :|| ||:: | ||||||| ucUUCAAGUGAGUGCAUAUUGUu 2 21 975 997 [mm9:4:65277184-65277206:+] 0.5901 147 7 -10.01 -0.4752 MIMAT0000593 mmu-miR-344 69807 Trim32 ugUCAGUCCGAAACCGAUC-UAGu ||| ||| || |||| ||| cuAGU-AGGGUUGCUCUAGAAUCg 2 22 109 131 [mm9:4:65276318-65276340:+] 0.5696 123 0 -17.45 -0.1420 MIMAT0000706 mmu-miR-362-5p 69807 Trim32 uaAGUGUGG-AUC--CAAGGU-UCCUAa || ||:: || || ||| ||||| cuUCUCAUUGAAGAUGUGCCAGAGGAUg 2 23 640 667 [mm9:4:65276849-65276876:+] 0.5804 120 0 -13.23 -0.2007 MIMAT0003388 mmu-miR-376b* 69807 Trim32 auugguaucuuccuUAUAGGUg ||||||| aagcagaugcuaacAUAUCCAg 2 9 781 802 [mm9:4:65276990-65277011:+] 0.5901 140 7 -10.55 -0.3194 MIMAT0002106 mmu-miR-465a-5p 69807 Trim32 agUGUA-GUCACGGUAA-GAUUUau |||| || | :|||| ||||| acACAUCCAUUUUCAUUACUAAAga 3 22 920 944 [mm9:4:65277129-65277153:+] 0.5901 120 0 -15.65 -0.1169 MIMAT0003166 mmu-miR-546 69807 Trim32 cugaggCACGGUGGUa ||||||||| cauuaaGUGCCACCAa 2 11 560 575 [mm9:4:65276769-65276784:+] 0.5702 150 7 -19.07 -0.7922 MIMAT0003166 mmu-miR-546 69807 Trim32 cugAGGCACGGUGGUa |:: |||||||| gaaUUUCUGCCACCAu 2 14 617 632 [mm9:4:65276826-65276841:+] 0.5708 149 7 -20.08 -0.9461 MIMAT0004786 mmu-miR-540-5p 69807 Trim32 ugucUCAGUCU---CCCACUGGGAAc ||| :|| | |||||||| cuccAGUGGGAUCUGCUUGACCCUUc 2 20 471 496 [mm9:4:65276680-65276705:+] 0.5696 150 7 -20.11 -0.5234 MIMAT0005295 mmu-miR-376c* 69807 Trim32 auUUGUAUCUUC--CU-------UAUAGGUg |||||| ||| || ||||||| ggAACAUAUAAGCAGAUGCUAACAUAUCCAg 2 21 772 802 [mm9:4:65276981-65277011:+] 0.5901 146 7 -14.61 -0.3194 MIMAT0003189 mmu-miR-291b-5p 69807 Trim32 ccUC-UCCCGGAGGUGAAACUAg || | | : ||: ||||||| guAGCAUGAUGUCUCCUUUGAUc 2 21 513 535 [mm9:4:65276722-65276744:+] 0.5696 151 7 -16.07 -0.1607 MIMAT0003189 mmu-miR-291b-5p 69807 Trim32 ccucucccgGAGGUGAAACUag :|: ||||||| ugcauauugUUUGACUUUGAga 3 14 987 1008 [mm9:4:65277196-65277217:+] 0.5901 129 0 -11.26 -0.1218 MIMAT0004825 mmu-miR-423-5p 69807 Trim32 uuucAGAGCGA--GAGACGGGGAGu |:|:|:| :| |||||||| gugaUUUUGUUUGUUAUGCCCCUCu 2 20 150 174 [mm9:4:65276359-65276383:+] 0.5696 158 7 -23.79 -0.8537 MIMAT0003471 mmu-miR-692 69807 Trim32 cucacUCCGCGA--GUUUCUCUa |||| :| :||||||| uuccaAGGCUUUAGUAAAGAGAa 2 17 291 313 [mm9:4:65276500-65276522:+] 0.5696 151 7 -14.26 -0.7942 MIMAT0003472 mmu-miR-693-5p 69807 Trim32 cuuuugaAAGCCUACACCGAc |||| ||||||| agugugcUUCGUCUGUGGCUu 2 15 423 443 [mm9:4:65276632-65276652:+] 0.5696 154 7 -15.95 -0.3251 MIMAT0003474 mmu-miR-694 69807 Trim32 gaaguccguuGUAAAAGUc |||||||| uugacacaucCAUUUUCAu 2 10 917 935 [mm9:4:65277126-65277144:+] 0.5901 145 7 -8.06 -0.5361 MIMAT0003493 mmu-miR-703 69807 Trim32 aaGAAAGGAAGACUUC--CAAAa ||| ||||:| ||| |||| caCUUGCCUUUUAAAGGAGUUUa 2 20 716 738 [mm9:4:65276925-65276947:+] 0.5901 123 0 -15.85 -1.0084 MIMAT0003498 mmu-miR-708* 69807 Trim32 gaUCUUCG-AGUGUC-AGAUCAAc |||| | | : || ||||||| cuAGAAUCGUAGAAGCUCUAGUUu 2 21 123 146 [mm9:4:65276332-65276355:+] 0.5696 154 7 -18.71 -0.4266 MIMAT0004237 mmu-miR-742 69807 Trim32 aaAUGGGUCGUACCACCGAAAg |:|:: |: | |||||||| ugUGCUUCGUCU-GUGGCUUUa 2 21 425 445 [mm9:4:65276634-65276654:+] 0.5696 154 7 -14.56 -0.5372 MIMAT0004938 mmu-miR-875-3p 69807 Trim32 guaUCGGAGUCAUAAAAGUCc |||: :|| ||||||| agaAGCUCUAG--UUUUCAGu 2 19 133 151 [mm9:4:65276342-65276360:+] 0.5696 151 7 -14.01 -0.3379 MIMAT0007874 mmu-miR-1904 69807 Trim32 ggagggaggucuccUCGUCUUg ||||||| uagaugaugcucuuAGCAGAAg 2 9 250 271 [mm9:4:65276459-65276480:+] 0.5696 140 7 -13.33 -0.5433 MIMAT0007875 mmu-miR-1898 69807 Trim32 cuAGGGGACACUUG--GAACUGGa ||| || || | ||||||| gcUCCAGUGGGAUCUGCUUGACCc 2 21 470 493 [mm9:4:65276679-65276702:+] 0.5696 155 7 -22.99 -0.2137 MIMAT0009391 mmu-miR-1928 69807 Trim32 cucgaccguuACAUCGa |||||| uauuauauucUGUAGCa 2 8 502 518 [mm9:4:65276711-65276727:+] 0.5696 120 6 -5.83 -0.1297 MIMAT0009424 mmu-miR-1953 69807 Trim32 gucuucggacucuuGAAAGGGu ||||||| aauaccacuuucuuCUUUCCCu 2 9 13 34 [mm9:4:65276222-65276243:+] 0.5521 140 7 -13.51 -0.6395 MIMAT0009430 mmu-miR-1957 69807 Trim32 caguauacgagAUGGUGAc ||||||| augaggagaaaUACCACUu 2 9 4 22 [mm9:4:65276213-65276231:+] 0.5521 140 7 -10.07 -0.6123 MIMAT0009431 mmu-miR-1958 69807 Trim32 ugaauGACGAAGGUGAAAGGAu :| ||||| ||||||| agaguUUCCUUCC-CUUUCCUu 2 18 39 59 [mm9:4:65276248-65276268:+] 0.5017 159 7 -18.39 -0.2533 MIMAT0009444 mmu-miR-1970 69807 Trim32 guUUCG-GAUAGGGGUCACUGUGu |||: | | | :||||||| uuAAGUGCCACCAAAGGUGACACa 2 22 562 585 [mm9:4:65276771-65276794:+] 0.5702 148 7 -21.84 -0.6299 MIMAT0012772 mmu-miR-599 69807 Trim32 caaACU-AUUUGACUGUGUu ||| |:::||||||| augUGAGGAGGUUGACACAu 2 17 906 925 [mm9:4:65277115-65277134:+] 0.5901 151 7 -16.84 -0.5563 MIMAT0012772 mmu-miR-599 69807 Trim32 caaacuaUUUGACUGUGUu ||: ||||||| gccaccaAAGGUGACACAu 2 13 568 586 [mm9:4:65276777-65276795:+] 0.5702 148 7 -12.26 -0.2688 MIMAT0012773 mmu-miR-767 69807 Trim32 acGAGUCUGUUGGUACCACGu ||: | :: : ||||||| ucCUUCGUUGUUGAUGGUGCc 2 20 59 79 [mm9:4:65276268-65276288:+] 0.5770 147 7 -12.98 -0.2012 MIMAT0000124 mmu-miR-15b 69807 Trim32 acAUUUGGUACUACACG-ACGAu |: |:: || ||||| |||| gcUGCAUUCUG-UGUGCAUGCUc 2 21 452 473 [mm9:4:65276661-65276682:+] 0.5696 122 0 -13.35 -0.4115 MIMAT0000125 mmu-miR-23b 69807 Trim32 ccaUUAGGGAC-CGUUACACUa || :|| |:||||||| ugaAAGAAUUGUGUAAUGUGAg 2 19 872 893 [mm9:4:65277081-65277102:+] 0.5901 149 7 -14.13 -0.6789 MIMAT0000125 mmu-miR-23b 69807 Trim32 ccauuagggaccGUUACACUa |||||||| agcuucgaccaaCAAUGUGAg 2 10 892 912 [mm9:4:65277101-65277121:+] 0.5901 145 7 -12.90 -0.1636 MIMAT0000142 mmu-miR-9 69807 Trim32 agUAUGUCGAUCUAU--UGGUUUCu |||: :|| :|: ||||||| guAUAUCAUUAAGUGCCACCAAAGg 2 22 554 578 [mm9:4:65276763-65276787:+] 0.5702 152 7 -14.65 -0.1859 MIMAT0000151 mmu-miR-140 69807 Trim32 gauggUAUCCCAUUUUGGUGAc :|| | |:||||||| cuuuaGUAAAG-AGAACCACUu 2 18 299 319 [mm9:4:65276508-65276528:+] 0.5696 147 7 -12.27 -0.4482 MIMAT0000165 mmu-miR-155 69807 Trim32 ugGGGAUAGUGUUAAUCGUAAUu |:||:|: :| ||||||| agCUCUGUUCUAUCAAGCAUUAa 2 22 1012 1034 [mm9:4:65277221-65277243:+] 0.5901 157 7 -16.78 -1.1506 MIMAT0000210 mmu-miR-181a 69807 Trim32 ugAGUGGCUGUCGCA--AC-UUACAa |:|::|| || | || ||||| agUUAUUGAAAGAAUUGUGUAAUGUg 2 22 866 891 [mm9:4:65277075-65277100:+] 0.5901 120 0 -11.61 -0.6536 MIMAT0000220 mmu-miR-190 69807 Trim32 uggaUUAUAUA-GUUUGUAUAGu |: | || | |||||||| uauaAGCAGAUGCUAACAUAUCc 2 19 778 800 [mm9:4:65276987-65277009:+] 0.5901 153 7 -8.77 -0.4384 MIMAT0000224 mmu-miR-194 69807 Trim32 agguguaccucAACGACAAUGu || ||||||| cuacugucuccUUCCUGUUACa 2 12 402 423 [mm9:4:65276611-65276632:+] 0.5696 147 7 -12.94 -0.5725 MIMAT0000225 mmu-miR-195 69807 Trim32 cgguuaUAA-AGACACG-ACGAu ||| | ||||| |||| ggcugcAUUCUGUGUGCAUGCUc 2 16 451 473 [mm9:4:65276660-65276682:+] 0.5696 122 0 -13.58 -0.4115 MIMAT0000239 mmu-miR-206 69807 Trim32 ggUGUGUGAAGGAAUGUA-AGGu | :|| | || |||| ||| auAAGCAGAUGCUAACAUAUCCa 2 21 779 801 [mm9:4:65276988-65277010:+] 0.5901 120 0 -11.82 -0.7653 MIMAT0000526 mmu-miR-15a 69807 Trim32 guguuugGUA--AUACACG-ACGAu ||| |:||||| |||| cuggcugCAUUCUGUGUGCAUGCUc 2 16 449 473 [mm9:4:65276658-65276682:+] 0.5696 122 0 -15.03 -0.4147 MIMAT0000527 mmu-miR-16 69807 Trim32 gcgguuaUAA-AUGCACG-ACGAu ||| |::|||| |||| uggcugcAUUCUGUGUGCAUGCUc 2 16 450 473 [mm9:4:65276659-65276682:+] 0.5696 122 0 -14.23 -0.4115 MIMAT0000532 mmu-miR-23a 69807 Trim32 ccUUUAGGGAC-CGUUACACUa ||| :|| |:||||||| ugAAAGAAUUGUGUAAUGUGAg 2 20 872 893 [mm9:4:65277081-65277102:+] 0.5901 154 7 -17.62 -0.6789 MIMAT0000532 mmu-miR-23a 69807 Trim32 ccuuuagggaccGUUACACUa |||||||| agcuucgaccaaCAAUGUGAg 2 10 892 912 [mm9:4:65277101-65277121:+] 0.5901 145 7 -12.90 -0.1636 MIMAT0000590 mmu-miR-342-3p 69807 Trim32 ugcccacgcuAAA--GACACACUCu ||| | ||||||| uuugaucaccUUUACCAGUGUGAGa 2 14 529 553 [mm9:4:65276738-65276762:+] 0.5696 144 7 -13.94 -0.8776 MIMAT0000597 mmu-miR-346 69807 Trim32 ucuCCGUCCGUGAGCCCGUCUGu | || | :| ||||||| uauGCCAUG-GCCAAGGCAGACg 2 21 750 771 [mm9:4:65276959-65276980:+] 0.5901 142 7 -19.57 -0.4492 MIMAT0000662 mmu-miR-216a 69807 Trim32 agugucAACGGUCGACUCUAAu ||| | :||||||| uauuguUUGAC-UUUGAGAUUu 2 17 991 1011 [mm9:4:65277200-65277220:+] 0.5901 146 7 -10.65 -0.8139 MIMAT0000669 mmu-miR-221 69807 Trim32 cuuugggucgucuguuACAUCGa |||||| cagugauauuauauucUGUAGCa 2 8 496 518 [mm9:4:65276705-65276727:+] 0.5696 120 6 -10.74 -0.1310 MIMAT0000670 mmu-miR-222 69807 Trim32 ugggucaucggucuACAUCGa |||||| gugauauuauauucUGUAGCa 2 8 498 518 [mm9:4:65276707-65276727:+] 0.5696 120 6 -9.29 -0.1297 MIMAT0000673 mmu-miR-181b 69807 Trim32 ugGGUGGCUGUCGU--UAC-UUACAa ::|::|| || | :|| ||||| agUUAUUGAAAGAAUUGUGUAAUGUg 2 22 866 891 [mm9:4:65277075-65277100:+] 0.5901 120 0 -12.80 -0.6536 MIMAT0003151 mmu-miR-378 69807 Trim32 ggaagacUGAGGUUCAGGUCa |||:| ||||||| guugaacACUUC-AGUCCAGa 2 15 693 712 [mm9:4:65276902-65276921:+] 0.5901 152 7 -18.64 -0.7956 MIMAT0000746 mmu-miR-381 69807 Trim32 ugUCUCUCGAACGGGA-ACAUAu ||: |||| | || ||||| uuAGGUAGCUAG--CUCUGUAUu 2 21 953 973 [mm9:4:65277162-65277182:+] 0.5901 121 0 -19.16 -0.6227 MIMAT0004747 mmu-miR-411 69807 Trim32 gcAUGCGAUAUG--CCAGAUGAu ||:| :| | ||||||| acUAUGAGGUCCCUAGUCUACUg 2 20 385 407 [mm9:4:65276594-65276616:+] 0.5696 142 7 -15.59 -0.3270 MIMAT0001542 mmu-miR-449a 69807 Trim32 ugGUC-GAUUGUUAUGUG-ACGGu ||| | |: ||| ||| |||| uuCAGUCCAGAAAU-CACUUGCCu 2 21 702 724 [mm9:4:65276911-65276933:+] 0.5901 121 0 -16.28 -1.0064 MIMAT0003727 mmu-miR-374 69807 Trim32 guGAAUCGUCCAACAUAAUAUa ||| || || ||||||| ccCUU--CA-GUGAUAUUAUAu 2 21 491 509 [mm9:4:65276700-65276718:+] 0.5696 147 7 -8.15 -0.7865 MIMAT0003453 mmu-miR-497 69807 Trim32 auguuugguGUCACACG-ACGAc | |||||| |||| ggcugcauuCUGUGUGCAUGCUc 2 14 451 473 [mm9:4:65276660-65276682:+] 0.5696 121 0 -16.30 -0.4210 MIMAT0003456 mmu-miR-495 69807 Trim32 uucuUCACGUGGUACAAACAAa |||| |:: |||||||| uuucAGUG-AUUUUGUUUGUUa 2 19 145 165 [mm9:4:65276354-65276374:+] 0.5696 160 7 -12.92 -0.9950 MIMAT0003460 mmu-miR-449c 69807 Trim32 ggUC-GAUCGUUACGUG-ACGGa || | || ||| ||| |||| ucAGUCCAGAAAU-CACUUGCCu 2 20 703 724 [mm9:4:65276912-65276933:+] 0.5901 120 0 -18.15 -1.0006 MIMAT0004852 mmu-miR-190b 69807 Trim32 uugGGUUAUAGUUUGUAUAGu | :||: | |||||||| aagCAGAUG-CUAACAUAUCc 2 19 781 800 [mm9:4:65276990-65277009:+] 0.5901 152 7 -10.73 -0.4384 MIMAT0004852 mmu-miR-190b 69807 Trim32 uuGGGUUAUAGUUUGUAU-AGu || || :| | ||||| || caCCAAAGGUGACACAUAGUCc 2 20 570 591 [mm9:4:65276779-65276800:+] 0.5702 123 0 -8.77 -0.2162 MIMAT0004855 mmu-miR-876-3p 69807 Trim32 acuuAAUGA-AACAUUUGGUGAu ||| | | :||||||| ggcuUUAGUAAAGAGAACCACUu 2 19 297 319 [mm9:4:65276506-65276528:+] 0.5696 145 7 -13.26 -0.4515 MIMAT0004869 mmu-miR-421 69807 Trim32 cgCGGGUUAAUUACAGAC-AACUa ||:| | |:: |||| |||| auGCUCCAGUGGGAUCUGCUUGAc 2 22 468 491 [mm9:4:65276677-65276700:+] 0.5696 125 0 -17.47 -0.2438 MIMAT0004896 mmu-miR-590-3p 69807 Trim32 ugaUCG-AAUAUG--UAUUUUAAu ||| ||| || |||||| | ucaAGCAUUAAACUAAUAAAAGUa 2 19 1024 1047 [mm9:4:65277233-65277256:+] 0.5901 128 0 -5.05 -0.1618 MIMAT0005850 mmu-miR-1192 69807 Trim32 uuAAACCAGACAAACAAACAAa || || |||||||||| uuUUCAGUGAUUUUGUUUGUUa 2 21 144 165 [mm9:4:65276353-65276374:+] 0.5696 160 7 -9.26 -0.9979

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G055982 Trim32 Mus musculus 69807 19536157 0 0 R51291; MOUSE$TRIM32_01; Binding factors: mmu-miR-128-3p , mmu-miR-27a-3p , mmu-miR-27b-3p , mmu-miR-673-5p // 0 0 R51427; MOUSE$TRIM32_02; Binding factors: mmu-miR-21a-5p , mmu-miR-590-5p // 0 0 R51428; MOUSE$TRIM32_03; Binding factors: mmu-miR-26a-5p , mmu-miR-26b-5p

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Trim32 mmu-miR-692 beg:294 end:313 pic:3' CTCACTCCGCGA--GTTTCTCTA 5'& |||| .||||||| &5' -----AGGCTTTAGTAAAGAGA- 3' Trim32 mghv-miR-M1-9 beg:795 end:811 pic:3' TTTTTCCAGGTCCGTTTACACT 5'& |||| |||||||||. &5' -------TCCA-GCAAATGTGG 3' Trim32 mmu-miR-876-3p beg:306 end:319 pic:3' ACTTAATGAAACATTTGGTGAT 5'& | .||||||| &5' -----------GAGAACCACT- 3' Trim32 mmu-miR-23a beg:877 end:893 pic:3' CCTTTAGGGAC-CGTTACACTA 5'& .|| |.||||||| &5' --------TTGTGTAATGTGA- 3' Trim32 mmu-miR-23b beg:877 end:893 pic:3' CCATTAGGGAC-CGTTACACTA 5'& .|| |.||||||| &5' --------TTGTGTAATGTGA- 3' Trim32 mmu-miR-23a beg:897 end:912 pic:3' CCTTTAGGGACCGTTACACTA 5'& || |||||||| &5' ------CCAA--CAATGTGA- 3' Trim32 mmu-miR-23b beg:897 end:912 pic:3' CCATTAGGGACCGTTACACTA 5'& || |||||||| &5' ------CCAA--CAATGTGA- 3' Trim32 mmu-miR-378 beg:697 end:712 pic:3' GGAAGACTGAGGTTCAGGTCA 5'& |||.| ||||||| &5' -------ACTTC-AGTCCAG- 3' Trim32 mmu-miR-767 beg:60 end:79 pic:3' ACGAGTCTGTTGGTACCACGT 5'& ||. | . ||||||| &5' --CTTCGTTGTTGATGGTGC- 3' Trim32 mmu-miR-1953 beg:17 end:34 pic:3' GTCTTCGGACTCTTGAAAGGGT 5'& || ||||||| &5' -------CTTTCTTCTTTCCC- 3' Trim32 mmu-miR-203star beg:301 end:319 pic:3' ACAACTTGACAG--TTCTTGGTGA 5'& || .||||||||| &5' ---------GTAAAGAGAACCACT 3' Trim32 mmu-miR-546 beg:563 end:574 pic:3' CTGAGGCACGGTGGTA 5'& ||||||||| &5' ------GTGCCACCA- 3' Trim32 mmu-miR-546 beg:616 end:633 pic:3' CTGAGGCACGGTGGTA 5'& |.|.| ||||||||| &5' -ATTTC-TGCCACCAT 3' Trim32 mmu-miR-423-5p beg:156 end:174 pic:3' TTTCAGAGCGAGAGACGGGGAGT 5'& .|.|.| |||||||| &5' -----TTTGTTA--TGCCCCTC- 3' Trim32 mmu-miR-323-3p beg:874 end:892 pic:3' TCTCCAGC-TGGCACATTACAC 5'& | |..|||||||||| &5' -------GAATTGTGTAATGTG 3' Trim32 mmu-miR-342-3p beg:543 end:554 pic:3' TGCCCACGCTAAAGACACACTCT 5'& |||||||| &5' ---------------GTGTGAGA 3' Trim32 mmu-miR-495 beg:146 end:165 pic:3' TTCTTCACGTGGTACAAACAAA 5'& |||| |. |||||||| &5' ----AGTG-ATTTTGTTTGTT- 3' Trim32 mcmv-miR-m01-1 beg:508 end:532 pic:3' GGCAA---GCTGCAATAAGAGGAGA 5'& |.|| .||.| ||||||.| &5' CTGTAGCATGATG----TCTCCTTT 3' Trim32 mcmv-miR-m01-1 beg:626 end:646 pic:3' GGCAAGCTGCAATAAGAGGAGA 5'& || ||. |||.||| &5' CCATA-GATTG---TCTTCTC- 3' Trim32 mcmv-miR-m01-3 beg:208 end:228 pic:3' AGCTCCGTTGTCAGCGAAGTGGC 5'& || || .|| ||||.||| &5' --GA-GCT-TAGA-GCTTTACC- 3' Trim32 mcmv-miR-m88-1 beg:600 end:626 pic:3' TCTGGGG--CTGTAGCTGAAGAC 5'& .||||.| |||. |.||||| &5' GGACCTCTTGACGGGAATTTCTG 3' Trim32 mghv-miR-M1-8 beg:972 end:990 pic:3' CTGGTTTGGGGG-TCACTCACGA 5'& .|..| ||||||||| &5' -------TCTTCAAGTGAGTGC- 3' Trim32 mmu-let-7c-2star beg:870 end:887 pic:3' CCTTTCTGTCATCTAACATATC 5'& |||||| |||||.|| &5' -GAAAGA------ATTGTGTA- 3' Trim32 mmu-miR-101a beg:494 end:516 pic:3' AAGTCA--ATAGTGTCATGACAT 5'& ||||| |||.|.| ||||| &5' -TCAGTGATATTATATT-CTGTA 3' Trim32 mmu-miR-101b beg:494 end:516 pic:3' AAGTCG--ATAGTGTCATGACAT 5'& ||||. |||.|.| ||||| &5' -TCAGTGATATTATATT-CTGTA 3' Trim32 mmu-miR-1198 beg:759 end:782 pic:3' GGTTCGGTCGGTCCTTGTGTAT 5'& ||||| ||| |.||||||.||| &5' CCAAGGCAGACGGGAACATATA 3' Trim32 mmu-miR-124star beg:683 end:702 pic:3' TAGTTCCAGGCGACACTTGTGC 5'& || |. ||||||| &5' -----GGATAGTGTTGAACAC- 3' Trim32 mmu-miR-125a-3p beg:704 end:722 pic:3' CCGAGGGTTCTTGGAGTGGACA 5'& .|| |||| ||||.|| &5' ----TCC-AGAAA-TCACTTG- 3' Trim32 mmu-miR-139-3p beg:508 end:529 pic:3' GAGGTTGTCCCGGC-GCAGAGGT 5'& || .|.|| .| .|||||| &5' CTGTAGCA----TGATGTCTCC- 3' Trim32 mmu-miR-143 beg:415 end:437 pic:3' CTCGATGT--CACGAAGTAGAGT 5'& |.|||| |||||||.||| &5' --GTTACAGTGTGCTTCGTCT-- 3' Trim32 mmu-miR-143 beg:139 end:162 pic:3' CTCGAT-GTCAC-GAAGTAGAGT 5'& ||.| ||||| .|| |.| &5' -AGTTTTCAGTGATTTTGTTT-- 3' Trim32 mmu-miR-144 beg:494 end:516 pic:3' TCA-TGTAGTAGATATGACAT 5'& ||| |.||.|| ||||| &5' AGTGATATTATATT--CTGTA 3' Trim32 mmu-miR-146a beg:131 end:150 pic:3' TTGGGTACCTTA-AG-TCAAGAGT 5'& ||| || ||||.||| &5' --------GAAGCTCTAGTTTTCA 3' Trim32 mmu-miR-155 beg:1011 end:1035 pic:3' TGGGGATAGTGTTAATCGTAATT 5'& |.||.|. .| |||||||| &5' --CTCTGTTCTATCAAGCATTAA 3' Trim32 mmu-miR-15astar beg:85 end:106 pic:3' ACTCCGTCGTGTCATACCGGAC 5'& || | || | |.||||||| &5' -GATGTGGC-C--TGTGGCCTG 3' Trim32 mmu-miR-15astar beg:77 end:99 pic:3' ACTCCGTCGTGTC-ATACCGGAC 5'& |.|| .|| |.||||||| &5' ----GTAGAGTAGATGTGGCCTG 3' Trim32 mmu-miR-184 beg:1007 end:1022 pic:3' TGGGAATAGTCAAGAGGCAGGT 5'& |.|| |||.||.| &5' -------TTAG--CTCTGTTC- 3' Trim32 mmu-miR-185 beg:183 end:200 pic:3' AGTCCTTGACGGAAAGAGAGGT 5'& || || ||.||||| &5' -------CTCCCCTTTTCTCC- 3' Trim32 mmu-miR-185 beg:16 end:33 pic:3' AGTCCTTGACGGAAAGAGAGGT 5'& ||| .| ||||.||| &5' ------ACTTTC-TTCTTTCC- 3' Trim32 mmu-miR-188-3p beg:462 end:482 pic:3' ACGTTTGGGACGTACACCCTC 5'& |||| .|.| || |||||| &5' TGCATGCTC--CA-GTGGGA- 3' Trim32 mmu-miR-188-3p beg:791 end:814 pic:3' ACGTTTGGGACGT--ACACCCTC 5'& || |.|| ||| ||||||| &5' --CATATCCAGCAAATGTGGGA- 3' Trim32 mmu-miR-1897-5p beg:185 end:206 pic:3' GGGGGAGAAAGAGGTAGGTTTC 5'& |||||. |||||| ||.|| &5' -CCCCTT-TTCTCCTTCTAA-- 3' Trim32 mmu-miR-1904 beg:586 end:607 pic:3' GGAGGGAGGTCTCCTCGTCTTG 5'& |||||.. || |||||.|| &5' --TCCCTTT-GAA-AGCAGGAC 3' Trim32 mmu-miR-192 beg:730 end:747 pic:3' CCGACAGTTAAGTATCCAGTC 5'& |.||.||||||.|| &5' -------AGTTTATAGGTTAG 3' Trim32 mmu-miR-1940 beg:44 end:67 pic:3' TTGACGAGGTGGAAGAGTCAGGAGGTA 5'& ||.| |||| | ||||.|.| &5' -----CTTC-CCTTTCCT-TCCTTCGT 3' Trim32 mmu-miR-194 beg:399 end:424 pic:3' AGGTGTACCTCAAC-GACAATGT 5'& ||.|| |||||||| &5' TCTACTGTCTCCTTCCTGTTACA 3' Trim32 mmu-miR-1943 beg:42 end:64 pic:3' AGGTCCACGGGTCTAGGAGGGAA 5'& ||| ||| ||||.|||| &5' TCCTT---CCCTT-TCCTTCCTT 3' Trim32 mmu-miR-1948 beg:466 end:491 pic:3' GACATGCTCACG--AGACGGATTT 5'& || | |||| |||||.|.| &5' -TGCTCCAGTGGGATCTGCTTGA- 3' Trim32 mmu-miR-1957 beg:8 end:22 pic:3' CAGTATACGAGATGGTGAC 5'& | ||||||| &5' -------GAAATACCACT- 3' Trim32 mmu-miR-1958 beg:39 end:59 pic:3' TGAATGACGAAGGT---GAAAGGAT 5'& |.|||| ||||||| &5' -------GTTTCCTTCCCTTTCCT- 3' Trim32 mmu-miR-1959 beg:844 end:863 pic:3' GAGGTGACTCGATGTAGGGG 5'& |||||||| |||.. |. &5' -TCCACTGACCTATG-CT-- 3' Trim32 mmu-miR-1969 beg:913 end:933 pic:3' TGGGTACAATTTCAGAGGTAGAA 5'& |||.| |||||.|| &5' ------GTTGACACATCCATTTT 3' Trim32 mmu-miR-1970 beg:565 end:586 pic:3' GTTTCGGATAGGGG--TCACTGTGT 5'& ||| || .|||||||| &5' ----GCCA---CCAAAGGTGACACA 3' Trim32 mmu-miR-206 beg:12 end:33 pic:3' GGTGTGTGAAGGAATGTAAGGT 5'& .|| |||||.||| | |||| &5' -TAC-CACTTTCTT-CTTTCC- 3' Trim32 mmu-miR-21 beg:730 end:746 pic:3' AGTTGTAGTCAGACTATTCGAT 5'& |||.| |||.|.|| &5' --------AGTTT-ATAGGTTA 3' Trim32 mmu-miR-2135 beg:587 end:611 pic:3' CAAAGCCGGGG---------TTCTGGAGA 5'& |.||| |.||||||| &5' ------GTCCCTTTGAAAGCAGGACCTCT 3' Trim32 mmu-miR-2140 beg:555 end:574 pic:3' TGGTGGTTCTAGAC-GTGGA 5'& |.||..||| || |||| &5' ATCATTAAG---TGCCACC- 3' Trim32 mmu-miR-215 beg:733 end:746 pic:3' CAGACAGTTTAGTATCCAGTA 5'& |.||||||.| &5' ----------TTATAGGTTA- 3' Trim32 mmu-miR-222 beg:75 end:96 pic:3' TGGGTCATCG-GTCTACATCGA 5'& || |||| .||||||.|| &5' --CC-GTAGAGTAGATGTGGC- 3' Trim32 mmu-miR-23a beg:534 end:552 pic:3' CCTTTAGGGACC-GTTACACTA 5'& ||.| ||.||||| &5' ------CCTTTACCAGTGTGA- 3' Trim32 mmu-miR-23b beg:529 end:552 pic:3' CCATTAG-GGACC--GTTACACTA 5'& |.||| ||| ||.||||| &5' --TGATCACCTTTACCAGTGTGA- 3' Trim32 mmu-miR-25 beg:870 end:890 pic:3' AGTCTGGCTCTGTTCACGTTAC 5'& || ||| |||.|||| &5' ---GAA--AGAATTGTGTAATG 3' Trim32 mmu-miR-300star beg:969 end:982 pic:3' TGTTTCCTATTGGAGAGAAGTT 5'& .|.||||||| &5' ------------TTTTCTTCAA 3' Trim32 mmu-miR-30astar beg:856 end:878 pic:3' CGACGTTTGTAGGCTGACTTTC 5'& ||| || | |.|||||| &5' --TGCTAAGAGTT-ATTGAAAG 3' Trim32 mmu-miR-30bstar beg:230 end:243 pic:3' CTGCATTTGTAGGTGTAGGGTC 5'& || .|||||| &5' -----------CCTTATCCCA- 3' Trim32 mmu-miR-327 beg:962 end:984 pic:3' TAGGAGTACG----GGGAGTTCA 5'& ||| ||. .|.|||||| &5' ---CTC-TGTATTTTCTTCAAGT 3' Trim32 mmu-miR-327 beg:157 end:174 pic:3' TAGGAGTACGGGGAGTTCA 5'& |. |.||||||||| &5' -TTGTTATGCCCCTC---- 3' Trim32 mmu-miR-3470a beg:1008 end:1029 pic:3' GGTCG-GACCAGATGTTTCACT 5'& .||| ||| ||||. ||| &5' -TAGCTCTGTTCTATCAAG--- 3' Trim32 mmu-miR-3474 beg:396 end:417 pic:3' CTTAGGTG-CAGAGGAGGGTCCC 5'& |.||.|| |||||||.|| &5' -AGTCTACTGTCTCCTTCC---- 3' Trim32 mmu-miR-363 beg:870 end:889 pic:3' ATGTCTACCTATGGCACGTTAA 5'& || || |..|||.||| &5' ----GAAAGA-ATTGTGTAAT- 3' Trim32 mmu-miR-370 beg:222 end:248 pic:3' TGGTCCAAGG--TGGGG-TCGTCCG 5'& ||||||| || |.||| ||.|| &5' ACCAGGTACCTTATCCCAAGTAG-- 3' Trim32 mmu-miR-381 beg:323 end:339 pic:3' TGTCTCTCGAACGGGAACATAT 5'& .||||||||||.| &5' --------TTTGCCCTTGTGT- 3' Trim32 mmu-miR-381 beg:332 end:352 pic:3' TGTCTCTCGAACGG-GAACATAT 5'& | |.||| .|||||| &5' -----GTGTTTGAAATTTGTAT- 3' Trim32 mmu-miR-383 beg:514 end:536 pic:3' TCGGTGT-CAGTGGAAGACTAGA 5'& ||| ||| || |.||||| &5' AGCATGATGTCTCC-TTTGATC- 3' Trim32 mmu-miR-431 beg:513 end:535 pic:3' ACGTACTGCCGGACGTT-CTGT 5'& ||||||. |.|| | ||. &5' -GCATGAT-GTCTCCTTTGAT- 3' Trim32 mmu-miR-432 beg:961 end:983 pic:3' GACGGGTGAC-TAGATGAGGTTCT 5'& ||. ||| ||.| ||.|||| &5' --GCT--CTGTATTTTCTTCAAG- 3' Trim32 mmu-miR-470star beg:338 end:356 pic:3' AGAAGAGTCTTTC--CATGACCAA 5'& |||| |||.|||| &5' --------GAAATTTGTATTGGT- 3' Trim32 mmu-miR-484 beg:85 end:107 pic:3' TAGCCCTCC-CCTGAC-TCGGACT 5'& || | || ||| .|||||| &5' -----GATGTGGCCTGTGGCCTGA 3' Trim32 mmu-miR-488 beg:705 end:730 pic:3' CTGGTTCTTTGT----CGGAAAGTT 5'& || |||||. ||||||.|| &5' --CC-AGAAATCACTTGCCTTTTAA 3' Trim32 mmu-miR-505 beg:57 end:75 pic:3' TCTTTTGGTCGTTCACAACTGC 5'& || |. ||||||.| &5' ------CCTTCGT-TGTTGATG 3' Trim32 mmu-miR-540-5p beg:475 end:496 pic:3' TGTCTCAGTCTCCC-------ACTGGGAAC 5'& | ||| |||||||| &5' ---------GTGGGATCTGCTTGACCCTT- 3' Trim32 mmu-miR-541 beg:575 end:595 pic:3' TCACACTGGTTGTAGTCTTAGGGAA 5'& ||||| |||| |.|||||| &5' ---GTGAC--ACAT---AGTCCCTT 3' Trim32 mmu-miR-668 beg:482 end:504 pic:3' CCATCACCCG-GCTCGGC--TCACTGT 5'& || .|| || |||||.| &5' --------GCTTGACCCTTCAGTGATA 3' Trim32 mmu-miR-669g beg:893 end:910 pic:3' TAGTACAGTTGTGTATGTTACGT 5'& ||.|| || ||||||. &5' ------TCGAC-CA-ACAATGT- 3' Trim32 mmu-miR-669k beg:451 end:472 pic:3' AACGTAC-GCACATATACGTAT 5'& ||||| .||||. |||| &5' -TGCATTCTGTGTGCATGC--- 3' Trim32 mmu-miR-674 beg:134 end:153 pic:3' ATGTGGTGAGGGT-AGAGTCACG 5'& .|||. |.|||||| &5' ------GCTCTAGTTTTCAGTG- 3' Trim32 mmu-miR-674 beg:480 end:501 pic:3' ATGTGGTGA---GGGTAGAGTCACG 5'& | || ||| .|||||| &5' ----CTGCTTGACCC--TTCAGTG- 3' Trim32 mmu-miR-680 beg:773 end:792 pic:3' GGGGGTACAGTCGTCTACGGG 5'& ||| |||||||||. &5' ----CATATAAGCAGATGCT- 3' Trim32 mmu-miR-688 beg:81 end:101 pic:3' CTTATTCATCAGCGGACGCT 5'& ||.||. || |||||.|. &5' GAGTAGAT-GTGGCCTGTGG 3' Trim32 mmu-miR-693-5p beg:425 end:443 pic:3' CTTTTGAAAGCCTACACCGAC 5'& .| |||| ||||||| &5' ----GC-TTCGTCTGTGGCT- 3' Trim32 mmu-miR-709 beg:42 end:62 pic:3' AGGAGGACGGAGACGGAGG 5'& ||||.| |||.| |.||| &5' TCCTTC--CCTTTCCTTCC 3' Trim32 mmu-miR-713 beg:457 end:479 pic:3' CGACACACG---GAAGTCACGT 5'& |||||||| || ||||| &5' -CTGTGTGCATGCTCCAGTG-- 3' Trim32 mmu-miR-742 beg:424 end:445 pic:3' AAATGGGTCGTACCACCGAAAG 5'& |.|. |. |||||||| &5' --TGCTTCGTCT-GTGGCTTT- 3' Trim32 mmu-miR-743b-3p beg:507 end:527 pic:3' AGATAAGTCGTACTACAGAAAG 5'& |||.| |||||||||||| &5' TCTGT--AGCATGATGTCT--- 3' Trim32 mmu-miR-759 beg:447 end:464 pic:3' CAGTTTTAACAAACGTGAGACG 5'& || ||||.||||. &5' --------TGGCTGCATTCTGT 3' Trim32 mmu-miR-883a-5p beg:249 end:268 pic:3' CATTGACGATGAAGAGAGTCGT 5'& | ||||.|||| &5' ------GATGATGCTCTTAGCA 3' Trim32 mmu-miR-93star beg:249 end:269 pic:3' GCCCTTC-ACGATCGAGTCGTCA 5'& || | |||| ||.||||| &5' ---GATGATGCT--CTTAGCAG- 3' Trim32 mmu-miR-9star beg:283 end:304 pic:3' TGAAAGCCAAT-AGA--TCGAAATA 5'& ||| || .|||||| &5' ------GGTACTTCCAAGGCTTTA- 3' Trim32 mmu-miR-9star beg:202 end:226 pic:3' TGAAAG--CCAATAGATCGAAATA 5'& ||||| | ||| ||||||| &5' ACTTTAGAGCTTAG--AGCTTTA- 3' Trim32 mmu-miR-599 beg:572 end:586 pic:3' CAAACTATTTGACTGTGTT 5'& ||. ||||||| &5' -------AAGGTGACACA- 3' Trim32 mmu-miR-599 beg:906 end:925 pic:3' CAAACTA-TTTGACTGTGTT 5'& ||| | .||||||| &5' ---TGAGGAGGTTGACACA- 3' Trim32 mmu-miR-133astar beg:219 end:230 pic:3' TAAACCAAGGTAAAATGGTCG 5'& |||||||| &5' ------------TTTACCAG- 3' Trim32 mmu-miR-133astar beg:534 end:548 pic:3' TAAACCAAGGTAAAATGGTCG 5'& || ||||||||. &5' --------CC--TTTACCAGT 3'

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 Trim32 mmu-let-7f 384 413 -UGAUAU-------GUUAGAUGAUGGAGU |||||: :|:||||||::||| GACUAUGAGGUCCCUAGUCUACUGUCUCC Trim32 mmu-miR-122a 450 477 UGUUUGUGGUA----ACA-GUGUGAGGU- ::| ||| ||| ||::||||| --UGGCUGCAUUCUGUGUGCAUGCUCCAG Trim32 mmu-miR-127 465 487 -CGGUUCGA-GUCUGCCUAGGCU || ||| ||| |||||:| UGCAU-GCUCCAGUGGGAUCUGC Trim32 mmu-miR-135a 736 760 AGUGUAUCCUUAUUUUU---CGGUAU- :||||| ||:|| |||||: --UUAUAGGU-UAGAAUUAUGCCAUGG Trim32 mmu-miR-135b 736 760 GUGUAUCCUUACUUUU--CGGUAU- :||||| ||| |||||: -UUAUAGGUUAGAAUUAUGCCAUGG Trim32 mmu-miR-140* 77 103 AGGCA-C-CA---AGAUGGGACACCAU |||| | || | |: ||||||| GCCGUAGAGUAGAUGUGGCCUGUGGC- Trim32 mmu-miR-141 533 552 -GGUAGAAAUGGUCUGUCACAAU :|| ||||||||| ||| AUCACCUUUACCAGU--GUGA-- Trim32 mmu-miR-143 417 438 ACUCGAUGU--CACGAAGUAGAGU |:|||| |||||||:||| --UGUUACAGUGUGCUUCGUCUG- Trim32 mmu-miR-145 574 608 -UUCC-CUA------AGGACC-CUUUUGACCUG- |||| || ||| ||||:| |||| AAAGGUGACACAUAGUCCCUUUGAAAGCAGGACC Trim32 mmu-miR-149 647 664 CCUCACUUCUGUGCCUCGGUCU- ||||||: | |||||| ---UUGAAGAU---GUGCCAGAG Trim32 mmu-miR-15a 944 968 GUGUUUGGUAAUACA-CGA-CGAU ||||||::||| || ||| ||| AACAAACUGUUAGGUAGCUAGCUC Trim32 mmu-miR-182 731 766 ACACUCAAG--------------AUGGUAACGGUUU- |||||: |:|||| |||||: --GGAGUUUAUAGGUUAGAAUUAUGCCAUGGCCAAGG Trim32 mmu-miR-183 613 635 -GUCACUU-AAGAUGGUCACGGUAU- |:| ||| ||||:||| ||||| ACGG-GAAUUUCUGCCA---CCAUAG Trim32 mmu-miR-184 413 438 UGGGAAUA-GUCAA--GAGGCAGGU :||| |||| ||:||||: UUCCUGUUACAGUGUGCUUCGUCUG Trim32 mmu-miR-192 732 748 ACAGUUAAGUAUCCAGUC- |:||:||||||:|| ---GAGUUUAUAGGUUAGA Trim32 mmu-miR-199a 685 704 CUUGUCC-AUCA-GACUUGUGACCC || |||| :|||||||| ----UGGAUAGUGUUGAACACUU-- Trim32 mmu-miR-200a 664 698 UGUAGCAA------UGG------UCUGUCACAAU- || ||| ||| :||:||||||: -GAUGGUUUGACUGACCCUAGUUGGAUAGUGUUGA Trim32 mmu-miR-203 679 707 -GAUC-ACC----AGGAUUUGUAAAGU- |||| ||| | :|:|||| |||| CCUAGUUGGAUAGUGUUGAACACUUCAG Trim32 mmu-miR-214 426 457 GACGGA-CAGACACGGA---------CGACA |||:| ||||||| || |||| GUGCUUCGUCUGUGGCUUUAAAUCUGGCUGC Trim32 mmu-miR-22 420 458 -UGUCAA--GAAGUU--------------GACCGUCGAA ||||| ||||: ||||| || UACAGUGUGCUUCGUCUGUGGCUUUAAAUCUGGCUGCA- Trim32 mmu-miR-221 73 97 -UUUGGGUCGUCUG--UUACAUCGA :: || |:||| :||||:|| UGGUGCC-GUAGAGUAGAUGUGGCC Trim32 mmu-miR-222 73 97 CUCUGGGUCAUCG-GUCUACAUCGA :| || |||| :||||||:|| UGGUGCC-GUAGAGUAGAUGUGGCC Trim32 mmu-miR-23a 872 894 CCUUUAGGGAC-CGUUACACUA |||| :|| |:||||||| UGAAAGAAUUGUGUAAUGUGAG Trim32 mmu-miR-23b 530 553 CCAUUAG-GGACC--GUUACACUA |:||| ||| ||:||||| -UUGAUCACCUUUACCAGUGUGAG Trim32 mmu-miR-28 378 398 GAGUUAUCUGACACUCGAGGAA | |:|||| |||| ||| -CCUUUGGACUAUGAGGUCCC- Trim32 mmu-miR-290 648 675 -UUUUU-CACGGGGG--UAUCAAACUC :||:| ||||| ||:|||||| UGAAGAUGUGCCAGAGGAUGGUUUGAC Trim32 mmu-miR-291b-5p 522 537 CUCUCCCGGAGGUGAAACUAG- |:|||| ||||||| -----UGUCUCC--UUUGAUCA Trim32 mmu-miR-292-3p 439 461 UGUGAGUUUUGGACCGCCGUGAA :||: |||:||||| |||:| -GGCUUUAAAUCUGGCUGCAUUC Trim32 mmu-miR-29a 62 80 UUGGCUAAAGUCUACCACGAU :|| |||||||| -UUCGUUGUU-GAUGGUGCC- Trim32 mmu-miR-29b 962 991 -UUGUGACUA-----AAGUUUAC-CACGAU |:| ||| |||||:|| |||| UAGCUCUGUAUUUUCUUCAAGUGAGUGCA- Trim32 mmu-miR-300 306 340 CUUCUCU---------CG---AACGGGAACGUAU |||||| |: |||||||||::| AAAGAGAACCACUUUAGUCCUUUGCCCUUGUGUU Trim32 mmu-miR-302b 120 143 -GAUGAUUUU-GUACCUUCGUGAA || |||:|| |:| ||||| || GCU-CUAGAAUCGUAGAAGCUCUA Trim32 mmu-miR-323 863 893 -UCUCC--AGCU-----GGCACAUUACACG |||| |:|| ::|||||||||| AAGAGUUAUUGAAAGAAUUGUGUAAUGUGA Trim32 mmu-miR-324-5p 452 488 -GUGGU----------UACGGGAUC-CCCU--ACGC | || ||||:| || |||| ||| GCUGCAUUCUGUGUGCAUGCUCCAGUGGGAUCUGCU Trim32 mmu-miR-331 806 835 AAGAUCCUA--------UCCGGGUCCCCG- | |:|||| :|||:|| || AUGUGGGAUAUUUUCUAGGGCUCAAA-GCG Trim32 mmu-miR-342 449 468 CUGCCCACGCUAAAGACACACUCU :|| ||| ||||||||| -CUGGCUGCA--UUCUGUGUGC-- Trim32 mmu-miR-346 757 790 UCUCCG--UCCGUGAGCC----------CGUCUGU ||| ||||| ||| |||||: --UGGCCAAGGCAGACGGGAACAUAUAAGCAGAUG Trim32 mmu-miR-362 714 767 AAGUG--UGGA---------------UCCAA---------------GGUUCCUAA |||| :||| ||||| |||||| AUCACUUGCCUUUUAAAGGAGUUUAUAGGUUAGAAUUAUGCCAUGGCCAAGGC-- Trim32 mmu-miR-370 224 249 UUGGUCCAAGG--UGGGGU-CGUCCG ||||||| || |:|||| |:|| UACCAGGUACCUUAUCCCAAGUAGA- Trim32 mmu-miR-375 886 908 AGUGCGCUCGGC-UUGCUUGUUU |:|:||||: :|| ||||| -AAUGUGAGCUUCGACCAACAAU Trim32 mmu-miR-378 599 620 UGUGUCCUGGACCUCAGUCCUC :|||||||| | |:||| -AGCAGGACCUCUUGACGGGAA Trim32 mmu-miR-379 385 408 GGAUGCA--AGGUAUCAGAUGGU |||:| ||| ||||||||: ACUAUGAGGUCCCUAGUCUACUG Trim32 mmu-miR-381 307 340 UGUCUCU---------CG---AACGGGAACAUAU ||||| |: ||||||||||:| -AAGAGAACCACUUUAGUCCUUUGCCCUUGUGUU Trim32 mmu-miR-383 514 537 -UCGGUGU-CAGUGGAAGACUAGA ||| ||| || |:||||| UAGCAUGAUGUCUCC-UUUGAUCA Trim32 mmu-miR-384 806 827 -ACA-CUUGUUAAAGAUCCUUA ||| |:|:| ||||||||: AUGUGGGAUAUUUUCUAGGGC- Trim32 mmu-miR-455-3p 422 460 -UCACAUAUA-CGGGCACC-----------UGACGUA- |||||: |:|:|||| :|||||| CAGUGUGCUUCGUCUGUGGCUUUAAAUCUGGCUGCAUU Trim32 mmu-miR-469 898 919 CCUGUGGUUCUAGUUAC-UUUCUCCGU ||||| ||||| :|:||||: ---GACCAA---CAAUGUGAGGAGGUU Trim32 mmu-miR-484 78 108 UAGCC-CUCC------CCUGAC-UCGGACU- || ||| || ||| :|||||| -CCGUAGAGUAGAUGUGGCCUGUGGCCUGAU Trim32 mmu-miR-485-3p 659 677 CUCUCCUCUCGGCACAUACUGA- |||||| :|:: ||||| CAGAGGAUGGUU-----UGACUG Trim32 mmu-miR-488* 707 731 CUGGUUCUUUGU----CGGAAAGUU- || |||||: ||||||:|| -UCC-AGAAAUCACUUGCCUUUUAAA Trim32 mmu-miR-491 377 401 -GGAGUACCU-----UCCCAAGGGGUGA |||: |||| ||| ||||:| CCCUU-UGGACUAUGAGG--UCCCUAG- Trim32 mmu-miR-495 979 1001 -UUC-UUCACGUGGUACAAACAAA ||| :||||||: |||||| CAAGUGAGUGCAUAUUGUUUGA-- Trim32 mmu-miR-497 464 489 -AUGUUUGGUGUCACAC--GACGAC |:|| :|: ||||| ||||| GUGCAUGCUCCAGUGGGAUCUGCUU Trim32 mmu-miR-541 577 596 ACACUGGUUGUAGUCUUAGGGAA- ||||| |||| |:|||||| GGUGAC--ACAU---AGUCCCUUU Trim32 mmu-miR-542-3p 493 520 AAAGUCA--AUAGUU--AGACAGUGU- |||||| |||:| ||||| :|| CUUCAGUGAUAUUAUAUUCUGUAGCAU Trim32 mmu-miR-546 560 576 CUGAGGCACGGUGGUA |:| ||||||||| CAUUAAGUGCCACCAA Trim32 mmu-miR-547 643 663 -AGUGAGUUUCUACAUGGUUC |||:| :|||||||:|||: CUCAUU-GAAGAUGUGCCAGA Trim32 mmu-miR-592 555 587 -UGUAGUA----GCGUAUA-----ACUGUGUUA |:||||| :|| ||||||| UAUAUCAUUAAGUGCCACCAAAGGUGACACAU- Trim32 mmu-miR-665 388 415 -AUUCCCUGGAGU------CGGAGGACCA |:||| ||| |:||||| AUGAGGUCCCUAGUCUACUGUCUCCUU-- Trim32 mmu-miR-668 72 104 CCAUCACC-CGGC------------UCGGCUCACUGU ||| |||| :||| |||:| ----AUGGUGCCGUAGAGUAGAUGUGGCCU-GUGGCC Trim32 mmu-miR-672 580 611 GUGUGUGUCAUGUGG-----------UUGGAGU |||||:||| | || :||||| GACACAUAGU-C-CCUUUGAAAGCAGGACCUCU Trim32 mmu-miR-674 451 480 AUGUGGUGAGG-----GUA-GA-GUCACG :| ||:||: ||| || ||||| GGCUGCAUUCUGUGUGCAUGCUCCAGUGG Trim32 mmu-miR-675-5p 614 633 UGACACCCGGGAAAGGC-GUGGU- ||| ||||:| ||||| ----CGGGAA-UUUCUGCCACCAU Trim32 mmu-miR-676* 58 88 CGUUCAGGAUU---------CCAA--CAUCUCA- |||| ||| ||||||| ----UUCCUUCGUUGUUGAUGGUGCCGUAGAGUA Trim32 mmu-miR-677 131 155 AGUCUUCGA--UUAGUAGUGACUU :||||||| |:|: ||| ||| GUAGAAGCUCUAGUUUUCAGUGAU Trim32 mmu-miR-679 570 593 -UGGUUCUCAGUGGAGUGUCAGG- ||||| :|| || ||:||||| CACCAAAGGUGACA-CAUAGUCCC Trim32 mmu-miR-680 751 793 GGGGGUACA------G---------------UCGUCUACGGG : ||||| | |||||||||: AUGCCAUGGCCAAGGCAGACGGGAACAUAUAAGCAGAUGCUA Trim32 mmu-miR-682 421 459 -GUC---UGAAGU-GACAC------------UGACGUC ||| :||||: ||||| :||||| ACAGUGUGCUUCGUCUGUGGCUUUAAAUCUGGCUGCAU Trim32 mmu-miR-683 576 606 CUC-CUGUGUC-----GAAUG--UCGUCC- :| |||||| ||| |||||| AGGUGACACAUAGUCCCUUUGAAAGCAGGA Trim32 mmu-miR-688 82 103 CUUAUUCAU---CAGCGGACGCU- :|||| || |||||:|: ---AGAGUAGAUGUGGCCUGUGGC Trim32 mmu-miR-689 602 619 -CCUGGGGCGGCUCGCCCCUGC |||||:| ::|| |||| AGGACCUC-UUGA-CGGGA--- Trim32 mmu-miR-690 72 106 AAACCA-------------ACACUCGGA--UCGGAAA |||| |||| |||| :|||| -AUGGUGCCGUAGAGUAGAUGUG-GCCUGUGGCCUG- Trim32 mmu-miR-693-3p 418 458 -AAUGUCGGU----GUAGACUU-----------UCGACG- ||||||: |:|||| :||||| GUUACAGUGUGCUUCGUCUGUGGCUUUAAAUCUGGCUGCA Trim32 mmu-miR-693-5p 427 444 CUUUUGAAAGCCUACACCGAC :| |||| ||||||| ---UGC-UUCGUCUGUGGCUU Trim32 mmu-miR-696 753 773 GGGUGUCG--UUCGUGUGCG |||::|| |:||| ||| GCCAUGGCCAAGGCAGACGG Trim32 mmu-miR-698 757 777 UCCC--UUCC-UUUGCUCUUAC || |||| |:|||:||| -UGGCCAAGGCAGACGGGAAC- Trim32 mmu-miR-7 383 414 GUUG---UUUUAGUGAUCAGA------AGGU :|| :|::|| ||||||| ||| GGACUAUGAGGUCCCUAGUCUACUGUCUCCU Trim32 mmu-miR-705 165 194 -ACGGGU--------GGGGUGGAGGGUGG- ||||| |||| |||||| |: AUGCCCCUCUUCCCCCCCCCCCUCCC-CUU Trim32 mmu-miR-706 96 126 AAAAAACUCUG-----------UCCCAAAGAGA- || |:| |||||| |||| ----CUGUGGCCUGAUUCUAGUAGGGUUGCUCUA Trim32 mmu-miR-708 131 153 -AUCUUCGAGUGUCAGA--UCAAC ||||||||| :|||:| ||| GUAGAAGCUC-UAGUUUUCAGUG- Trim32 mmu-miR-709 393 414 -AGGAGGACGGA-GACGGAGG- ||| |: |:|| |||:|||| GUCC-CUAGUCUACUGUCUCCU Trim32 mmu-miR-713 459 482 CGACACACG---GAAGUCACGU- |||||||| || ||||| : UCUGUGUGCAUGCUCCAGUGGGA Trim32 mmu-miR-714 663 688 CGCUG----GCUGGCCGGGAGCAGC- ||: :|||:| |||| ||:| -GGAUGGUUUGACUGACCCUAGUUGG Trim32 mmu-miR-720 469 484 ACCUCCGGGGUCGCUCUA- ||:||||:|:||| ----UGCUCCAGUGGGAUC Trim32 mmu-miR-744 949 973 CGACAAUCGG--GAUCGGGGCGU- ||||||| : |||||:|:|:| ACUGUUAGGUAGCUAGCUCUGUAU Trim32 mmu-miR-759 442 465 CAGUUUUAACAAACGUGAGACG- |:||| || ||||:||||: UUUAAAUCUGGCUGCAUUCUGUG Trim32 mmu-miR-761 432 458 ACACAGUCAAAG-----UGGGACGACG- ||| || |:|: ||||| --CGUCUGUGGCUUUAAAUCUGGCUGCA Trim32 mmu-miR-762 170 193 CGAGACAGGGCC-GGGGUCGGGG- |||| |||| |||| |||| CCUCU-UCCCCCCCCCCCUCCCCU Trim32 mmu-miR-763 656 689 -CGGUG----ACCAAGAA-----GGGUCGACC- |||| |||||: ||:||:||| UGCCAGAGGAUGGUUUGACUGACCCUAGUUGGA Trim32 mmu-miR-764-3p 420 446 -UGUCA-ACGGU---GAUACCGGAGGA ||||| |||: ||:||||:|: UACAGUGUGCUUCGUCUGUGGCUUUA- Trim32 mmu-miR-7b 263 297 -UUGUUUU-----AGUGUUCA------GAAGGU- |:||:|| |:| |||| |||||| UAGCAGAAGUUGCUUAGAAGUUAGGUACUUCCAA Trim32 mmu-miR-99a 597 619 UGUUCUAGCCU--AGA--UGCCCA ||| ||| ||| ||||| -AAAGCA-GGACCUCUUGACGGGA Trim32 mmu-miR-140 312 319 -------------GAUGGUAUCCCA---------UUUUGGUGAC || ||| ||| |:||||||| UAGAAGUUAGGUACUUCCA-AGGCUUUAGUAAAGAGAACCACUU Trim32 mmu-miR-155 1027 1034 G---------------------GGGAUAGUGUUAAUCGUAAUU |:||:|: :| |||||||| AUUGUUUGACUUUGAGAUUUAGCUCUGUUCUAUCAAGCAUUAAA Trim32 mmu-miR-23a 886 893 C---------------------CUUUAGGGAC-CGUUACACUA |||| :|| |:||||||| CUGACCUAUGCUAAGAGUUAUUGAAAGAAUUGUGUAAUGUGAG Trim32 mmu-miR-291b-5p 528 535 CUCUCC------------------------CGGAGGUGAAACUAG |:||| |||||||| CUUCAGUGAUAUUAUAUUCUGUAGCAUGAUGUCUC--CUUUGAUCA Trim32 mmu-miR-323 885 892 --------------UCUCC--AGC-----UGGCACAUUACACG |||| |:| |::|||||||||| ACUGACCUAUGCUAAGAGUUAUUGAAAGAAUUGUGUAAUGUGA Trim32 mmu-miR-346 764 771 UC---------UCCGU-------------CCGUGAGCCCGUCUGU |||: ||| | |||||||: AAGGAGUUUAUAGGUUAGAAUUAUGCCAUGGC-CAA-GGCAGACGG Trim32 mmu-miR-546 568 575 C---------------------------UGAGGCACGGUGGUA |:| ||||||||| AUCACCUUUACCAGUGUGAGAGUAUAUCAUUAAGUGCCACCAA Trim32 mmu-miR-546 625 632 C----------------------------UGAGGCACGGUGGUA |:|:| ||||||||| CCCUUUGAAAGCAGGACCUCUUGACGGGAAUUUC-UGCCACCAUA Trim32 mmu-miR-693-5p 436 443 CUUU-----------------------UGAAAGCCUACACCGAC :||| || ||||||| UCUACUGUCUCCUUCCUGUUACAGUGUGCUU-CGUCUGUGGCUU Trim32 mmu-miR-708 139 146 ----------------------------AUCUUCGAGUGUCAGAUCAAC ||||||| ||||||| UGAUUCUAGUAGGGUUGCUCUAGAAUCGUAGAAGC------UCUAGUUU Trim32 mmu-let-7f 385 412 UGAUAU-------GUUAGAUGAUGGAGu |||||: :|:||||||::||| ACTATGAGGTCCCTAGTCTACTGTCTCc Trim32 mmu-miR-122a 451 475 uguuuGUGGUA-ACA-GUGUGAGGU ||:: | ||| ||::||||| ggctgCATTCTGTGTGCATGCTCCA Trim32 mmu-miR-135a 734 758 agugUAUCC--UUAUUUUUCGGUAu ||||| |: | | ||||| gtttATAGGTTAGAATTATGCCATg Trim32 mmu-miR-135b 735 758 gugUAUCCUUACUU--UUCGGUAu ||||| ||| | ||||| tttATAGGTTAGAATTATGCCATg Trim32 mmu-miR-140 290 319 GAUGGUAUCC-----CAUU----UUGGUGAc || ||| ||| |||| ||||||| CTTCCA-AGGCTTTAGTAAAGAGAACCACTt Trim32 mmu-miR-140* 82 103 aggCACCAAGAUGGGACACCau || | | |: ||||||| agaGTAGATGTGGCCTGTGGcc Trim32 mmu-miR-141 534 551 gGUAGAAAUGGUCUGUCACAau || |||||| |||||| tCACCTTTAC----CAGTGTga Trim32 mmu-miR-143 415 438 acuCGAUGU--CACGAAGUAGAgu |:|||| |||||||:||| cctGTTACAGTGTGCTTCGTCTgt Trim32 mmu-miR-145 575 606 UUCC-CU-------AAGGACCCUUUUGACCUG |||| || | ||| ||||:| |||| AAGGTGACACATAGTCCCTTTGAAAGCAGGAC Trim32 mmu-miR-149 644 662 ccUCACUUCUGUGCCUCGGUCU | ||||||: | |||||| tcATTGAAGAT---GTGCCAGA Trim32 mmu-miR-155 1013 1034 gGGGAUAGUGUUAAUCGUAAUU |:||:|: :| |||||||| gCTCTGTTCTATCAAGCATTAA Trim32 mmu-miR-182 743 764 acaCUCAAGAUGGUAACGGUUu || || |:|||| ||||| ttaGAATTATGCCATGGCCAAg Trim32 mmu-miR-183 630 662 GUCACUUA-AGAUG-GU--------CACGGUau || || | ||| | || |||||| CATAGATTGTCTTCTCATTGAAGATGTGCCAga Trim32 mmu-miR-184 394 417 uGGGAAUAG-UCA-AGAGGCAGGu |||| :|| | | ||||| ||| tCCCTAGTCTACTGTCTCCTTCCt Trim32 mmu-miR-192 729 746 acagUUAAGUAUCCAGUC |:||:||||||:|| aaggAGTTTATAGGTTAG Trim32 mmu-miR-199a 681 705 cUUGUCC-AUCA-GACUUGUGAccc |:: || |||| :|||||||| tAGTTGGATAGTGTTGAACACTtca Trim32 mmu-miR-200a 678 696 uGUAGCAAUGGUCUGUCACAAu | | ||| :||:|||||| cCCTAGTT---GGATAGTGTTg Trim32 mmu-miR-203 680 705 GAUCA--C---CAGGAUUUGUAAAGU ||||| | || :|:|||| |||| CTAGTTGGATAGTGTTGAACACTTCA Trim32 mmu-miR-214 449 474 GACGGAC---AG--ACACGGACGAca ||| ||| || ||||| |||| CTGGCTGCATTCTGTGTGCATGCTcc Trim32 mmu-miR-22 434 458 uGUCA-AGAAGUU--GACCGUCGaa | || |||:|| ||||| || tCTGTGGCTTTAAATCTGGCTGCat Trim32 mmu-miR-221 74 96 uuugGGUCGUCU-GU-UACAUCGa || |:||| :| ||||:|| ggtgCC-GTAGAGTAGATGTGGCc Trim32 mmu-miR-222 71 96 CU-CUGGGUCAUC-GGUCUACAUCGa || |:: | |||| :||||||:|| GATGGTGCCGTAGAGTAGATGTGGCc Trim32 mmu-miR-23a 872 893 cCUUUAGGGAC-CGUUACACUa |||| :|| |:||||||| tGAAAGAATTGTGTAATGTGAg Trim32 mmu-miR-23b 529 552 ccAUUAG-GG--ACCGUUACACUa |:||| || | ||:||||| ttTGATCACCTTTACCAGTGTGAg Trim32 mmu-miR-28 377 398 GAGUUAUCUGACACUCGAGGaa | | |:|||| |||| ||| CCCTTTGGACTATGAGGTCCct Trim32 mmu-miR-290 650 674 UUUUUCACGG--GGGUAUCAAACUc ||:| ||||| ||:|||||| AAGATGTGCCAGAGGATGGTTTGAc Trim32 mmu-miR-291b-5p 517 535 cucuccCGGAGGUGAAACUAG |:||| |||||||| catgatGTCTC--CTTTGATC Trim32 mmu-miR-292-3p 438 460 uguGAGUUUUGGACCGCCGUGAa ||: |||:||||| |||:| tggCTTTAAATCTGGCTGCATTc Trim32 mmu-miR-29a 61 80 uugGCUAAAGUCUACCACGau || || : |||||||| cttCG-TTGTTGATGGTGCcg Trim32 mmu-miR-29b 963 991 UUGUGAC-UA----AAGUUUAC-CACGau |:| ||| || |||||:|| |||| AGCTCTGTATTTTCTTCAAGTGAGTGCat Trim32 mmu-miR-300 317 339 cuucUCUCG-AACGGGAACGUAu || | |||||||||::| ctttAGTCCTTTGCCCTTGTGTt Trim32 mmu-miR-302b 121 142 GAUGAUUUU-GUACCUUCGUGAa || |||:|| |:| ||||| || CT-CTAGAATCGTAGAAGCTCTa Trim32 mmu-miR-323 864 892 UCUC--CAGC-----UGGCACAUUACACg |||| |:| |::|||||||||| AGAGTTATTGAAAGAATTGTGTAATGTGa Trim32 mmu-miR-324-5p 463 487 gugguUACGGGAUC-CCCU--ACGc ||||:| || |||| ||| tgtgcATGCTCCAGTGGGATCTGCt Trim32 mmu-miR-342 448 469 cugCCCACGCUAAAGACACACucu || ||| | ||||||||| tctGGCTGC-A-TTCTGTGTGcat Trim32 mmu-miR-346 745 771 UCUCCGUCCGUGAGC----CCGUCUGu ||| :| || | | ||||||| AGAATTATGCCATGGCCAAGGCAGACg Trim32 mmu-miR-362 748 768 aAGUGUGGAUCCAAGGUUCCuaa |:|::|| || |||||| aTTATGCCATGG--CCAAGGcag Trim32 mmu-miR-370 224 249 uUGGUCCAAGG--UGGGG-UCGUCcg ||||||| || |:||| ||:|| tACCAGGTACCTTATCCCAAGTAGaa Trim32 mmu-miR-375 885 907 AGUGCGCUCG--GCUUGCUUGUUu | |:|:|||| || || ||||| TAATGTGAGCTTCG-ACCAACAAt Trim32 mmu-miR-378 598 619 UGUGUCCUGGACCUCAGUCCUc | :|||||||| | |:||| AAGCAGGACCTCTTGACGGGAa Trim32 mmu-miR-381 317 339 ugucUCUCG-AACGGGAACAUAu || | ||||||||||:| ctttAGTCCTTTGCCCTTGTGTt Trim32 mmu-miR-383 515 536 UCGGUGU-CAGUGGAAGACUAGa ||| | ||| || |:||||| AGCATGATGTCTCC-TTTGATCa Trim32 mmu-miR-384 807 827 ACA-CUUGUUAAAGAUCCuua ||| |:|:| |||||||| TGTGGGATATTTTCTAGGgct Trim32 mmu-miR-455-3p 423 458 UCACAU-AUACGGGCAC-----------CUGACGUA |||||: | |:|:||| |:|||||| AGTGTGCTTCGTCTGTGGCTTTAAATCTGGCTGCAT Trim32 mmu-miR-469 895 918 ccugUGGUUCUAGUUAC-UUUCUCCgu ||||| ||||| :|:|||| ttcgACCAA---CAATGTGAGGAGGtt Trim32 mmu-miR-484 83 106 uagccCU-CCCCUGAC-UCGGACU || | || ||| :|||||| gagtaGATGTGGCCTGTGGCCTGA Trim32 mmu-miR-488* 706 729 CUGGUUCUUUGU---CGGAAAGUU | |||: || || ||||||:|| GTCCAGAAATCACTTGCCTTTTAA Trim32 mmu-miR-491 378 401 GGAGUACCU--U-CCCAAGGGGUga |||: |||| | | | ||||:| CCTT-TGGACTATGAGGTCCCTAgt Trim32 mmu-miR-495 980 1002 UUC-UUCACGUGGUACAAACaaa ||| :||||||: |||||| AAGTGAGTGCATATTGTTTGact Trim32 mmu-miR-497 447 473 auGUUUGGUGU----CACACG-ACGAc | ::|::|| |||||| |||| atCTGGCTGCATTCTGTGTGCATGCTc Trim32 mmu-miR-542-5p 512 531 gCACUGUACUACUAGGGGcuc || :||||||| ||:|| tGTAGCATGATG-TCTCCttt Trim32 mmu-miR-546 617 632 CUGAGGCACGGUGGUA || |:: ||||||||| GAATTTCTGCCACCAT Trim32 mmu-miR-546 560 575 cUGAGGCACGGUGGUa |:| ||||||||| cATTAAGTGCCACCAa Trim32 mmu-miR-547 644 662 AGUGAGUUUCUACAUGGUuc ||| |::|||||||:||| TCA-TTGAAGATGTGCCAga Trim32 mmu-miR-592 556 587 UGUAGUA----GCG-----UAUAACUGUGUua |:||||| :|| | : ||||||| ATATCATTAAGTGCCACCAAAGGTGACACAta Trim32 mmu-miR-665 389 416 AUUCCCUGGA------GUCGGAGGAcca |:||| ||| | |:||||| TGAGGTCCCTAGTCTACTGTCTCCTtcc Trim32 mmu-miR-668 67 96 cCAUC-ACC-CGG---CUCGGCU-CACUGu || | ||| ||| |||: || |||:| tGTTGATGGTGCCGTAGAGTAGATGTGGCc Trim32 mmu-miR-674 479 501 auguGGUGA---GGGUAGAGUCACg |::|| ||| :|||||| ggatCTGCTTGACCC--TTCAGTGa Trim32 mmu-miR-675-5p 609 631 ugACACCCGGGAAAGGC-GUGGU || || ||||:| ||||| ctTGACGGGAATTTCTGCCACCA Trim32 mmu-miR-676* 65 86 cguucaggauuccaaCAUCUCA ||||||| gttgttgatggtgccGTAGAGT Trim32 mmu-miR-679 571 591 UGGUUCUCAGUGGAGUGUCAGG ||||| :|| | | ||:||||| ACCAAAGGTGA-CACATAGTCC Trim32 mmu-miR-680 772 792 ggggGUACAGUCGUCUACGgg ||| | ||||||||| ggaaCATATAAGCAGATGCta Trim32 mmu-miR-682 437 458 guCUGAAG-UGACACUGACGUc |:|||: | | ||:||||| gtGGCTTTAAATCTGGCTGCAt Trim32 mmu-miR-683 577 604 CUCCUGUG--UC---GAA--UGUCGUCC |: ||||| || ||| | |||||| GGTGACACATAGTCCCTTTGAAAGCAGG Trim32 mmu-miR-688 83 101 CUUAUUCAUCAGCGGACGCu ||:||: | || |||||:| GAGTAGAT-GTGGCCTGTGg Trim32 mmu-miR-689 603 621 CCUGGGGCGGCUCGCCCCUgc |||||:| ::|| |||| | GGACCTC-TTGA-CGGGAAtt Trim32 mmu-miR-690 84 106 aaACCAACACUCGG--AUCGGAaa | | |||| ||| |:|||| agTAGATGTG-GCCTGTGGCCTga Trim32 mmu-miR-693-3p 419 452 AAUGU----CGGUGUAGAC-------UUUCGACg ||||| ||: |:|||| ||| ||| TTACAGTGTGCTTCGTCTGTGGCTTTAAATCTGg Trim32 mmu-miR-693-5p 423 443 cuuuugaAAGCCUACACCGAc |||| ||||||| agtgtgcTTCGTCTGTGGCTt Trim32 mmu-miR-698 756 777 UCCC--UUCC-UUUGCUCUUac | || |||| |:|||:||| ATGGCCAAGGCAGACGGGAAca Trim32 mmu-miR-7 386 407 GUUGUUUUAGUGAUCAGAAGgu | |::|::|| ||||||| | CTATGAGGTCCCTAGTCTACtg Trim32 mmu-miR-705 174 193 ACGGGUGGGGUGGAGGGugg | ||| |||| |||||| TTCCCCCCCCCCCTCCCctt Trim32 mmu-miR-706 104 124 aaaAAACUCUGUCCCAAAGAGA || || :|||||| |||| tgaTTCTAG-TAGGGTTGCTCT Trim32 mmu-miR-708 124 146 AUCUUCGAGUGUC----AGAUCAAc ||||| ||::|| ||||||| TAGAA--TCGTAGAAGCTCTAGTTt Trim32 mmu-miR-709 394 412 AGGAGGACGGA-GACGGAGG ||| |: |:|| |||:|||| TCC-CTAGTCTACTGTCTCC Trim32 mmu-miR-714 666 686 cgCUGGCUGGCCGGGAGCAGC | ::|||:| |||| ||:| tgGTTTGACTGACCCTAGTTG Trim32 mmu-miR-720 465 482 ACCUCCGGGGUCGCUCUA || | ||:||||:|:||| TGCATGCTCCAGTGGGAT Trim32 mmu-miR-761 436 456 ACACAGUCAAAGUGGGA-CGACG |||| | ||| | :|| ||||| TGTGGC--TTTAAATCTGGCTGC Trim32 mmu-miR-763 657 687 CGGU----GACCAA---GA--AGGGUCGACC |||| ||||| || ||:||:||| GCCAGAGGATGGTTTGACTGACCCTAGTTGG Trim32 mmu-miR-764-3p 421 446 UGUCA-ACG--GU-GAUACCGGAgga ||||| ||| |: ||:||||:| ACAGTGTGCTTCGTCTGTGGCTTtaa Trim32 mmu-miR-7b 276 295 uuguUUUAGUGUUCA-GAAGGU ||:| :|:|| |||||| ttagAAGT--TAGGTACTTCCA Trim32 mmu-miR-99a 600 618 uGUUCUAGCCUAGA--UGCCCa ||:|| | ||| ||||| gCAGGACC---TCTTGACGGGa

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Trim32 RAID00019649 mmu-miR-190a-5p miRNA MIMAT0000220 Trim32 mRNA 69807 Prediction 0.1828 Trim32 RAID00077488 mmu-miR-7092-3p miRNA MIMAT0028091 Trim32 mRNA 69807 Prediction 0.1828 Trim32 RAID00153207 mmu-miR-194-1-3p miRNA MIMAT0016999 Trim32 mRNA 69807 Prediction 0.1828 Trim32 RAID00175310 mmu-miR-421-3p miRNA MIMAT0004869 Trim32 mRNA 69807 Prediction 0.1828 Trim32 RAID00219008 mmu-miR-3078-5p miRNA MIMAT0014864 Trim32 mRNA 69807 Prediction 0.1828 Trim32 RAID00246589 mmu-miR-374c-3p miRNA MIMAT0014954 Trim32 mRNA 69807 Prediction 0.1828 Trim32 RAID00308751 mmu-miR-7646-3p miRNA MIMAT0029795 Trim32 mRNA 69807 Prediction 0.1828 Trim32 RAID00311433 mmu-miR-590-3p miRNA MIMAT0004896 Trim32 mRNA 69807 Prediction 0.1828 Trim32 RAID00374720 mmu-miR-374b-5p miRNA MIMAT0003727 Trim32 mRNA 69807 Prediction 0.1828 Trim32 RAID00426233 mmu-miR-181a-5p miRNA MIMAT0000210 Trim32 mRNA 69807 Prediction 0.1828 Trim32 RAID00428503 mmu-miR-7041-5p miRNA MIMAT0027986 Trim32 mRNA 69807 Prediction 0.1828 Trim32 RAID00739725 mmu-miR-16-5p miRNA MIMAT0000527 Trim32 mRNA 69807 Prediction 0.1828 Trim32 RAID00767131 mmu-miR-221-3p miRNA MIMAT0000669 Trim32 mRNA 69807 Prediction 0.1828 Trim32 RAID00850344 mmu-miR-15a-5p miRNA MIMAT0000526 Trim32 mRNA 69807 Prediction 0.1828 Trim32 RAID00857742 mmu-miR-181b-1-3p miRNA MIMAT0017067 Trim32 mRNA 69807 Prediction 0.1828 Trim32 RAID00867651 mmu-miR-7044-3p miRNA MIMAT0027993 Trim32 mRNA 69807 Prediction 0.1828 Trim32 RAID01008566 mmu-miR-378a-3p miRNA MIMAT0003151 Trim32 mRNA 69807 Prediction 0.1828 Trim32 RAID01056416 mmu-miR-9-5p miRNA MIMAT0000142 Trim32 mRNA 69807 Prediction 0.1828 Trim32 RAID01187283 mmu-miR-195a-5p miRNA MIMAT0000225 Trim32 mRNA 69807 Prediction 0.1828 Trim32 RAID01243620 mmu-miR-1970 miRNA MIMAT0009444 Trim32 mRNA 69807 Prediction 0.1828 Trim32 RAID01400986 mmu-miR-23a-3p miRNA MIMAT0000532 Trim32 mRNA 69807 Prediction 0.1828 Trim32 RAID01401732 mmu-miR-320-3p miRNA MIMAT0000666 Trim32 mRNA 69807 Prediction 0.1828 Trim32 RAID01513438 mmu-miR-26a-1-3p miRNA MIMAT0017020 Trim32 mRNA 69807 Prediction 0.1828 Trim32 RAID01717495 mmu-miR-497a-5p miRNA MIMAT0003453 Trim32 mRNA 69807 Prediction 0.1828 Trim32 RAID01804886 mmu-miR-546 miRNA MIMAT0003166 Trim32 mRNA 69807 Prediction 0.1828 Trim32 RAID01885428 mmu-miR-876-3p miRNA MIMAT0004855 Trim32 mRNA 69807 Prediction 0.1828 Trim32 RAID01957585 mmu-miR-183-5p miRNA MIMAT0000212 Trim32 mRNA 69807 Prediction 0.1828 Trim32 RAID02080324 mmu-miR-874-3p miRNA MIMAT0004853 Trim32 mRNA 69807 Prediction 0.1828 Trim32 RAID02087028 mmu-miR-449c-5p miRNA MIMAT0003460 Trim32 mRNA 69807 Prediction 0.1828 Trim32 RAID02170928 mmu-miR-15b-5p miRNA MIMAT0000124 Trim32 mRNA 69807 Prediction 0.1828 Trim32 RAID02247660 mmu-miR-6999-5p miRNA MIMAT0027900 Trim32 mRNA 69807 Prediction 0.1828 Trim32 RAID02385945 mmu-miR-346-5p miRNA MIMAT0000597 Trim32 mRNA 69807 Prediction 0.1828 Trim32 RAID02446700 mmu-miR-1192 miRNA MIMAT0005850 Trim32 mRNA 69807 Prediction 0.1828 Trim32 RAID02452353 mmu-miR-23b-3p miRNA MIMAT0000125 Trim32 mRNA 69807 Prediction 0.1828 Trim32 RAID02455542 mmu-miR-495-3p miRNA MIMAT0003456 Trim32 mRNA 69807 Prediction 0.2202 Trim32 RAID02510714 mmu-miR-742-3p miRNA MIMAT0004237 Trim32 mRNA 69807 Prediction 0.1828 Trim32 RAID02520509 mmu-miR-7054-5p miRNA MIMAT0028012 Trim32 mRNA 69807 Prediction 0.1828 Trim32 RAID02541769 mmu-miR-216a-5p miRNA MIMAT0000662 Trim32 mRNA 69807 Prediction 0.1828 Trim32 RAID02781402 mmu-miR-133a-5p miRNA MIMAT0003473 Trim32 mRNA 69807 Prediction 0.1828 Trim32 RAID02805399 mmu-miR-181b-5p miRNA MIMAT0000673 Trim32 mRNA 69807 Prediction 0.1828 Trim32 RAID02953517 mmu-miR-155-5p miRNA MIMAT0000165 Trim32 mRNA 69807 Prediction 0.2381 Trim32 RAID03031913 mmu-miR-206-3p miRNA MIMAT0000239 Trim32 mRNA 69807 Prediction 0.1828 Trim32 RAID03035863 mmu-miR-140-5p miRNA MIMAT0000151 Trim32 mRNA 69807 Prediction 0.1828 Trim32 RAID03038212 mmu-miR-7652-5p miRNA MIMAT0029810 Trim32 mRNA 69807 Prediction 0.1828 Trim32 RAID03085096 mmu-miR-181b-2-3p miRNA MIMAT0017084 Trim32 mRNA 69807 Prediction 0.1828 Trim32 RAID03229507 mmu-miR-381-3p miRNA MIMAT0000746 Trim32 mRNA 69807 Prediction 0.1828 Trim32 RAID03389569 mmu-miR-190b-5p miRNA MIMAT0004852 Trim32 mRNA 69807 Prediction 0.1828 Trim32 RAID03421014 mmu-miR-449a-5p miRNA MIMAT0001542 Trim32 mRNA 69807 Prediction 0.1828 Trim32 RAID03503479 mmu-miR-194-5p miRNA MIMAT0000224 Trim32 mRNA 69807 Prediction 0.2202 Trim32 RAID03742473 mmu-miR-1953 miRNA MIMAT0009424 Trim32 mRNA 69807 Prediction 0.1828 Trim32 RAID03751501 mmu-miR-1198-3p miRNA MIMAT0017332 Trim32 mRNA 69807 Prediction 0.1828 Trim32 RAID03777420 mmu-miR-6935-3p miRNA MIMAT0027771 Trim32 mRNA 69807 Prediction 0.1828 Trim32 RAID03794848 mmu-miR-411-5p miRNA MIMAT0004747 Trim32 mRNA 69807 Prediction 0.1828 Trim32 RAID03847991 mmu-miR-6926-3p miRNA MIMAT0027753 Trim32 mRNA 69807 Prediction 0.1828 Trim32 RAID03897491 mmu-miR-222-3p miRNA MIMAT0000670 Trim32 mRNA 69807 Prediction 0.1828 Trim32 RAID03897526 mmu-miR-694 miRNA MIMAT0003474 Trim32 mRNA 69807 Prediction 0.1828 Trim32 RAID03997144 mmu-miR-505-3p miRNA MIMAT0003513 Trim32 mRNA 69807 Prediction 0.1828 Trim32 RAID04015350 mmu-miR-6902-5p miRNA MIMAT0027704 Trim32 mRNA 69807 Prediction 0.1828 Trim32 RAID04027875 mmu-miR-342-3p miRNA MIMAT0000590 Trim32 mRNA 69807 Prediction 0.1828 Trim32 RAID05240695 G730013B05Rik lncRNA 619312 Trim32 protein 69807 Microarray//RNA-seq 0.6606