iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

SNP - dbSNP
dbSNP	Type	Alleles	Het	Se(het)	Fxn-class	Gene Name	Assembly	Chr-pos	Sequence	Entrez Gene
rs4226880	snp	G/T	0.226843	0.248925	utr-variant-3-prime	Tnrc6a	GRCm38.p3	7:123194878	TAGGACGCTGTCACG[G/T]CAGTCAGCTTCGTGT	233833
rs6267480	snp	A/G	0.375	0.216506	intron-variant	Tnrc6a	Mm_Celera	7:123033918	TAAACAAATTGTCTG[A/G]TCTGTGCATCTCCAT	233833
rs6268531	snp	A/C	0.5	0	intron-variant	Tnrc6a	Mm_Celera	7:123034087	GAGTGGAGAGATGTA[A/C]CCTTGATTGGGGAAC	233833
rs6268570	snp	C/T	0.304688	0.243945	intron-variant	Tnrc6a	Mm_Celera	7:123034106	TGATTGGGGAACTTA[C/T]AAAATACNATGCCTA	233833
rs6268577	snp	A/T	0.5	0	intron-variant	Tnrc6a	Mm_Celera	7:123034114	GAACTTANAAAATAC[A/T]ATGCCTANTTATTTT	233833
rs6268590	snp	C/T	0.5	0	intron-variant	Tnrc6a	Mm_Celera	7:123034122	AAAATACNATGCCTA[C/T]TTATTTTCCAGACTG	233833
rs6269631	snp	C/T	0.5	0	intron-variant	Tnrc6a	Mm_Celera	7:123034364	ggccaacgagtccag[C/T]tgaatgaatggttga	233833
rs6270594	snp	A/G	0.5	0	intron-variant	Tnrc6a	Mm_Celera	7:123034501	cacacacacacgctc[A/G]ctcacatatacacac	233833
rs13464492	snp	C/T			utr-variant-3-prime, downstream-variant-500B	Tnrc6a	Mm_Celera	7:123193373	ATATGGGGGCAGCTG[C/T]TCCAGTGTAGATGTT	233833
rs13479499	snp	A/G	0.189624	0.2426	intron-variant	Tnrc6a	Mm_Celera	7:123037967	TCTAGTGGATAACTC[A/G]ACTGTGCACATTCTG	233833
rs30628704	snp	A/G	0.475309	0.108333	intron-variant	Tnrc6a	Mm_Celera	7:123068631	CAGAAGCAGAAAGAT[A/G]AACAAAGAACCCAAT	233833
rs30666710	snp	C/G	0.375	0.216506	intron-variant	Tnrc6a	Mm_Celera	7:123069954	CCCTGACCACCACGC[C/G]TGTGCCATGGTATAC	233833
rs30681282	snp	C/T	0.444444	0.157135	intron-variant	Tnrc6a	Mm_Celera	7:123069490	GTGGAACAGCACAGA[C/T]AAAGCCTGGCAGAGT	233833
rs30720066	snp	A/G	0.487535	0.077957	intron-variant	Tnrc6a	Mm_Celera	7:123069159	TGCATCTAATTCTGA[A/G]TTCAAACCCCAAATT	233833
rs30790333	snp	A/T	0.444444	0.157135	intron-variant	Tnrc6a	Mm_Celera	7:123070396	ATTCCCAGAACTCAC[A/T]TTAAAAAACAAACAA	233833
rs30873734	snp	C/T	0.375	0.216506	intron-variant	Tnrc6a	Mm_Celera	7:123066142	CCTGAACGCCCGCTG[C/T]GCAGATATTTTGAGT	233833
rs30916047	snp	C/T	0.375	0.216506	intron-variant	Tnrc6a	Mm_Celera	7:123065520	TTTTAGGTATATGGG[C/T]ATTTTGTCCTCATGT	233833
rs30975013	snp	C/T	0.375	0.216506	intron-variant	Tnrc6a	Mm_Celera	7:123066865	ACTGATGTTTCACCT[C/T]TTTAATTAATTTAAC	233833
rs31014079	snp	G/T	0.197531	0.244432	intron-variant	Tnrc6a	Mm_Celera	7:123068850	TCCGGAGCTTGGCTA[G/T]CGGCCAGAGAACACA	233833
rs31016313	snp	A/G	0.444444	0.157135	intron-variant	Tnrc6a	Mm_Celera	7:123140113	TGGTGGTTTGAATAC[A/G]CTTGGCCCAGGAGTG	233833
rs31042086	snp	A/G	0.444444	0.157135	intron-variant	Tnrc6a	Mm_Celera	7:123185137	CTAACTAAAGGTTGA[A/G]CAATACACTGATCTA	233833
rs31089284	snp	A/T	0.493827	0.0552116	intron-variant	Tnrc6a, LOC105243050	Mm_Celera	7:123090570	ATAGGACATCTTCTA[A/T]TGGTATGGATATGTA	233833
rs31097123	snp	A/G	0.429688	0.173817	intron-variant	Tnrc6a	Mm_Celera	7:123039656	GCTTGTTTTCTCTGG[A/G]TGGAAAGAAATCCAA	233833
rs31097947	snp	C/T	0.375	0.216506	intron-variant, downstream-variant-500B, nc-transcript-variant	Tnrc6a, LOC105243050	Mm_Celera	7:123075980	GTAAGTAGACTCAAA[C/T]GTGGGTCTTCTGTGA	233833
rs31101049	snp	C/T	0.444444	0.157135	intron-variant	Tnrc6a	Mm_Celera	7:123043974	ATTAACTTAGGACTC[C/T]CTTGGTGGCAAGTGT	233833
rs31101311	snp	A/G	0.32	0.24	intron-variant	Tnrc6a	Mm_Celera	7:123046671	ACACGTCTGAGTGCT[A/G]AGCTGCCTGGTGCTT	233833
rs31103009	snp	C/T	0.18	0.24	intron-variant	Tnrc6a	Mm_Celera	7:123058108	TGAGGTAAGTTAGCA[C/T]AGTCTGGTCTAAAAC	233833
rs31103602	snp	C/T	0.444444	0.157135	intron-variant	Tnrc6a	Mm_Celera	7:123150883	TCTCTGTGTTCAAGG[C/T]CAACCTGGTCTACAG	233833
rs31143420	snp	A/G	0.432133	0.171253	upstream-variant-2KB	Tnrc6a	Mm_Celera	7:123030223	AATCAAAGCAGAGAA[A/G]AAACAAAGCAAGCAG	233833
rs31149819	snp	A/C/G	0.52071	0.181417	intron-variant	Tnrc6a	GRCm38.p3	7:123113920	ATAAGGTATATGTGT[A/C/G]TTTATATATTTAGAG	233833
rs31189593	snp	A/G	0.375	0.216506	intron-variant, nc-transcript-variant	Tnrc6a, LOC105243050	Mm_Celera	7:123084325	GGGTCTGCAGGGAGG[A/G]TGGACCCTGGGGGAA	233833
rs31197662	snp	C/T	0.444444	0.157135	upstream-variant-2KB, intron-variant	Tnrc6a	Mm_Celera	7:123061633	TGGGGGATTGGTATT[C/T]GGTGGCCAATGACCA	233833
rs31231704	snp	G/T	0.375	0.216506	intron-variant	Tnrc6a	Mm_Celera	7:123113602	TGTCCTGGAACTCAC[G/T]CTTTAGACCAGGCTG	233833
rs31240744	snp	C/G	0.487535	0.077957	intron-variant	Tnrc6a	Mm_Celera	7:123162172	CCCATTTGTTCTTTT[C/G]CTGTATATTTTAAGT	233833
rs31251064	snp	A/G	0.498615	0.0262793	intron-variant	Tnrc6a	Mm_Celera	7:123178274	ACAAATGTGTTTTCA[A/G]TAAATACCATTTCCT	233833
rs31256416	snp	C/T	0.432133	0.171253	intron-variant, nc-transcript-variant	Tnrc6a, LOC105243050	Mm_Celera	7:123085179	TACACGAAGATTCCC[C/T]TAGAGTCTTCCAAAT	233833
rs31276332	snp	A/G	0.359862	0.224567	intron-variant	Tnrc6a	Mm_Celera	7:123114041	TGAACAGCAAGTGAC[A/G]GTGATGGGAACAGGA	233833
rs31277471	snp	C/G	0.415225	0.187619	intron-variant, nc-transcript-variant	Tnrc6a, LOC105243050	Mm_Celera	7:123083681	CCCCTAACGGAGGCC[C/G]AGTATTAGGTTTCAA	233833
rs31286041	snp	A/T	0.46875	0.121031	intron-variant	Tnrc6a	Mm_Celera	7:123161025	AGTCCCAGAGTTCTG[A/T]TTTGTTCTGTAGTGG	233833
rs31303892	snp	C/G	0.255	0.24995	intron-variant	Tnrc6a	Mm_Celera	7:123036230	GTTGTTTGCCCCACA[C/G]ATAGCATTTTTCCAA	233833
rs31320970	snp	A/G	0.277778	0.248452	intron-variant, nc-transcript-variant	Tnrc6a, LOC105243050	Mm_Celera	7:123083607	GGGGTAATAGGAGCA[A/G]CCCCAGTCCCAGTGC	233833
rs31338908	snp	A/G	0.375	0.216506	intron-variant	Tnrc6a	Mm_Celera	7:123040017	GAGGTTGGGCAGGGG[A/G]ACTCACCCCCATGTA	233833
rs31349146	snp	C/T	0.277778	0.248452	intron-variant	Tnrc6a	Mm_Celera	7:123039831	TTTAGGAACATGTTT[C/T]ATATTTTATATTATT	233833
rs31369794	snp	A/G	0.484429	0.0868505	intron-variant	Tnrc6a	Mm_Celera	7:123139731	TTCTCATATACACAC[A/G]CCGTATGGTCTAGTG	233833
rs31374886	snp	C/T	0.408163	0.193609	intron-variant	Tnrc6a	Mm_Celera	7:123039677	AGAAATCCAATAATA[C/T]CTTTCTATAATTATA	233833
rs31381065	snp	A/G	0.375	0.216506	intron-variant	Tnrc6a	Mm_Celera	7:123047269	ATGAACCCAAACAAA[A/G]TTAACTAGAAACTTA	233833
rs31383268	snp	C/T	0.375	0.216506	intron-variant	Tnrc6a	Mm_Celera	7:123036350	CAAAACAAAACAAAT[C/T]CATAACTGTCTCTCT	233833
rs31421479	snp	A/G	0.444444	0.157135	intron-variant	Tnrc6a	Mm_Celera	7:123133000	ATTTGTTGAAAAGAT[A/G]GTTTCTCTGGTATCC	233833
rs31429019	snp	A/G	0.375	0.216506	intron-variant, upstream-variant-2KB	Tnrc6a, LOC105243050	Mm_Celera	7:123102469	AGTTAGGGTTTTACT[A/G]CTGTGAACAGATACC	233833
rs31430208	snp	C/T	0.359862	0.224567	intron-variant, nc-transcript-variant	Tnrc6a, LOC105243050	Mm_Celera	7:123082550	CTCCATGACTGTAGT[C/T]GGGTGCACTGAGGTG	233833
rs31433245	snp	A/T	0.444444	0.157135	intron-variant	Tnrc6a, LOC105243050	Mm_Celera	7:123092402	AGTTTGACTAAAGTC[A/T]CGCTGTGATTTTGGA	233833
rs31440697	snp	A/G	0.255	0.24995	intron-variant	Tnrc6a	Mm_Celera	7:123106991	ATGTGAACAGGCTTG[A/G]TTTCAGGTATCTGGG	233833
rs31453172	snp	C/T	0.432133	0.171253	intron-variant	Tnrc6a	Mm_Celera	7:123032897	GAAATAACAGGGTAC[C/T]CGGAAAATATAGAAG	233833
rs31459320	snp	A/G	0.375	0.216506	intron-variant, downstream-variant-500B	Tnrc6a, LOC105243050	Mm_Celera	7:123076168	GAAAAAAAAAAAAAA[A/G]AAAAGAAAAGAAAGT	233833
rs31471052	snp	A/G	0.432133	0.171253	intron-variant	Tnrc6a	Mm_Celera	7:123189608	AGCAGTTCTCTGCTT[A/G]CATAGTCTCAGGACA	233833
rs31493346	snp	A/C	0.375	0.216506	intron-variant	Tnrc6a	Mm_Celera	7:123104496	GCTTTCCTCCCAAGT[A/C]CTGGAATTAAAGGTA	233833
rs31496756	snp	C/T	0.432133	0.171253	intron-variant	Tnrc6a	Mm_Celera	7:123183260	ACAGCCTGTCCCTTC[C/T]GCTTCATTCACACAG	233833
rs31508887	snp	A/T	0.375	0.216506	intron-variant, nc-transcript-variant	Tnrc6a, LOC105243050	Mm_Celera	7:123082611	CTCTCTCTCTCTCTC[A/T]CACACACACACACAC	233833
rs31508892	snp	A/T	0.290657	0.246672	intron-variant	Tnrc6a	Mm_Celera	7:123037874	CTGTTCATTTCCATC[A/T]GTGACAGACTCCAGC	233833
rs31521028	snp	C/T	0.475309	0.108333	intron-variant	Tnrc6a	Mm_Celera	7:123146809	AAGTTCATCACAACC[C/T]GCCTGCTCTGTCTGT	233833
rs31528173	snp	A/G	0.495	0.0497494	intron-variant	Tnrc6a	Mm_Celera	7:123189669	GATTGCCAGCTCTGG[A/G]CTCTTTGTCTTTCTC	233833
rs31529559	snp	A/G	0.444444	0.157135	intron-variant	Tnrc6a, LOC105243050	Mm_Celera	7:123089610	AGTGTTTGAATTAAA[A/G]GTGTGCTCCACTATA	233833
rs31532002	snp	G/T	0.444444	0.157135	intron-variant	Tnrc6a	Mm_Celera	7:123073548	TACAATCGATAAAAT[G/T]ATAATATTTTGAAGT	233833
rs31532724	snp	G/T	0.375	0.216506	intron-variant	Tnrc6a	Mm_Celera	7:123035887	TATAGAGTTTTTTTT[G/T]GGGGGGGGTAGTTTT	233833
rs31541313	snp	A/G	0.188366	0.242283	intron-variant	Tnrc6a	Mm_Celera	7:123053480	TGCATGCTAAGCGGG[A/G]GTTCTATTATTGAAC	233833
rs31542610	snp	A/C	0.444444	0.157135	intron-variant, downstream-variant-500B, nc-transcript-variant	Tnrc6a, LOC105243050	Mm_Celera	7:123075776	AAAAATGTGTTTATT[A/C]TGGTAATTATTTGTG	233833
rs31549601	snp	C/T	0.375	0.216506	intron-variant, utr-variant-3-prime	Tnrc6a	Mm_Celera	7:123180850	CTGTTCCTGGGGAGC[C/T]TGATGCCCTCCTCTG	233833
rs31551767	snp	A/G	0.475309	0.108333	intron-variant	Tnrc6a	Mm_Celera	7:123043131	TCTGAAATGGCCAAG[A/G]AAATAAAGATTTACT	233833
rs31571128	snp	A/C	0.33241	0.236027	intron-variant	Tnrc6a	Mm_Celera	7:123046720	TCGGTTAACAGTCCG[A/C]AGCCTGATTTGAAGC	233833
rs31573594	snp	C/T	0.493827	0.0552116	intron-variant, downstream-variant-500B, nc-transcript-variant	Tnrc6a, LOC105243050	Mm_Celera	7:123075926	AGATTTAGCTTTCTT[C/T]GGATTTATGTTTATT	233833
rs31574303	snp	A/G	0.375	0.216506	intron-variant	Tnrc6a	Mm_Celera	7:123125648	TTTTGCATCATATTT[A/G]GACACTCAGAAACTT	233833
rs31581206	snp	A/G	0.456747	0.140554	intron-variant	Tnrc6a	Mm_Celera	7:123111670	CGTTGATAGACATTT[A/G]AGTTATCTGTACTTC	233833
rs31599185	snp	C/T	0.444444	0.157135	intron-variant	Tnrc6a	Mm_Celera	7:123039052	CTTTTTTCTTTCTGG[C/T]TTAGCTCTGTAGAAT	233833
rs31604619	snp	A/C	0.484429	0.0868505	intron-variant	Tnrc6a	Mm_Celera	7:123071134	AGGACTGCCAGGCCG[A/C]TCCACAGCAAAATGC	233833
rs31613425	snp	A/C	0.375	0.216506	intron-variant	Tnrc6a	Mm_Celera	7:123055106	ACAACAAAAAAAAAA[A/C]AAAAAAAAAAAACCA	233833
rs31618465	snp	A/C/T	0.444444	0.157135	intron-variant	Tnrc6a, LOC105243050	GRCm38.p3	7:123091156	ATACATACATAAACA[A/C/T]ACATACATACATACA	233833
rs31648826	snp	A/C	0.444444	0.157135	intron-variant	Tnrc6a, LOC105243050	Mm_Celera	7:123091152	ATACATACATACATA[A/C]ACATACATACATACA	233833
rs31651335	snp	A/G	0.32	0.24	intron-variant	Tnrc6a	Mm_Celera	7:123036185	AGTGGGGACTTGTCT[A/G]CTGTGGAGCTTTTGG	233833
rs31653581	snp	G/T	0.444444	0.157135	intron-variant	Tnrc6a	Mm_Celera	7:123039113	GGACCCTATACTTTG[G/T]CATATAATATTTTTA	233833
rs31655580	snp	C/T	0.401235	0.199068	intron-variant	Tnrc6a	Mm_Celera	7:123043169	GCTGTTAATTGGGTG[C/T]ACGATGGTCAGTCTT	233833
rs31697209	snp	A/G	0.475309	0.108333	intron-variant	Tnrc6a, LOC105243050	Mm_Celera	7:123092434	GCCCCAAAGCTCCAT[A/G]TTCGTAAGGACCGAG	233833
rs31711281	snp	A/G	0.197531	0.244432	intron-variant	Tnrc6a	Mm_Celera	7:123135838	TTGGTTTAGCTGCCT[A/G]TACTCTGGAACTGGT	233833
rs31717748	snp	A/G	0.475309	0.108333	intron-variant	Tnrc6a	Mm_Celera	7:123166473	AATGAGAAAAATACC[A/G]AGTTAAGGAAAATTA	233833
rs31735178	snp	A/G	0.5	0	intron-variant, nc-transcript-variant	Tnrc6a, LOC105243050	Mm_Celera	7:123076480	ACTTGAGAGGTGGAG[A/G]CAGGGGGATCAAGGT	233833
rs31743274	snp	A/C	0.456747	0.140554	intron-variant	Tnrc6a	Mm_Celera	7:123146684	AGTCACAAACTGTTA[A/C]GACAAGGTTTGTGGA	233833
rs31744492	snp	C/T	0.444444	0.157135	intron-variant	Tnrc6a	Mm_Celera	7:123052147	AGTTGTGACCAAGCC[C/T]GCTCAGTCAACAGGT	233833
rs31760076	snp	C/T	0.444444	0.157135	intron-variant	Tnrc6a	Mm_Celera	7:123036596	GCTGCCCAGTTAGTG[C/T]ATACACGGTGGCAAT	233833
rs31767196	snp	A/G	0.487535	0.077957	intron-variant	Tnrc6a	Mm_Celera	7:123179475	AAAACCTACACTTTA[A/G]CCAGGTGTGTGGACC	233833
rs31767449	snp	C/T	0.444444	0.157135	intron-variant	Tnrc6a, LOC105243050	Mm_Celera	7:123091154	ACATACATACATAAA[C/T]ATACATACATACATA	233833
rs31821270	snp	A/G	0.265928	0.249492	intron-variant	Tnrc6a, LOC105243050	Mm_Celera	7:123091215	GGGATGTTGCTTAGC[A/G]GTAGAGCATTTGCTT	233833
rs31864714	snp	G/T	0.387812	0.208586	synonymous-codon	Tnrc6a	Mm_Celera	7:123170368	ACAAAATAATGAACT[G/T]CCTACTAGTAATCCA	233833
rs31871854	snp	A/C	0.375	0.216506	intron-variant	Tnrc6a	Mm_Celera	7:123164688	CTAGGCAAAAAAAAA[A/C]CCCCAAAACCCAAGA	233833
rs31876478	snp	A/G	0.33241	0.236027	intron-variant, upstream-variant-2KB	Tnrc6a, LOC105243050	Mm_Celera	7:123088445	GACATCAGTTCCAAG[A/G]TCCTCCATTGTTGTC	233833
rs31898148	snp	C/T	0.401235	0.199068	intron-variant	Tnrc6a	Mm_Celera	7:123040744	TTGTATATCCAGTTC[C/T]AACCAGGGCTGTTCA	233833
rs31936105	snp	A/T	0.375	0.216506	intron-variant	Tnrc6a	Mm_Celera	7:123147738	TTTTAAAGATTTTTT[A/T]AAAAAATGTATATAA	233833
rs31954030	snp	A/G	0.375	0.216506	intron-variant	Tnrc6a	Mm_Celera	7:123131671	ACTATGGAATCATGC[A/G]ATAGAATTCTTTAGT	233833
rs31971182	snp	C/G	0.487535	0.077957	intron-variant	Tnrc6a, LOC105243050	Mm_Celera	7:123078277	CTTCCCTTTCGTATC[C/G]GGTGATCCTACCCTC	233833
rs31977901	snp	A/G	0.265928	0.249492	intron-variant	Tnrc6a	Mm_Celera	7:123049077	GCCTATATTTCAGAG[A/G]AGGGCTCTGTATTCT	233833
rs31985387	snp	C/T	0.375	0.216506	intron-variant	Tnrc6a, LOC105243050	Mm_Celera	7:123093277	ATTTTGAGTTGTTTA[C/T]TCCTGATCTTTTAAA	233833
rs31994015	snp	A/G	0.484429	0.0868505	intron-variant	Tnrc6a	Mm_Celera	7:123130261	TAAAAGGATGGCCAC[A/G]AACATAAATATAGTT	233833

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