DNA & RNA Element - AREsite Gene Name Motif CDS Area ARE Area Evidence Sae1; Aos1; Sua1; Ubl1a1; Uble1a ATTTA 48-1100 1566-1570;1627-1631 Identification of a target RNA motif for RNA-binding protein HuR.#Proc Natl Acad Sci U S A 2004; 101(9): 2987-92.!

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004521 mmu-miR-15b* 56459 Sae1 auCUCGUCGUUU--AUUACUA-AGc ||||| || | | ||||| || gaGAGCAUCAUACUUCAUGAUGUCa 2 21 197 221 [mm9:7:16912965-16912989:-] 0.5005 127 0 -13.07 -0.4645 MIMAT0004523 mmu-miR-29b* 56459 Sae1 auUUGGUGGUAUACUUUGGUCg |:|| :| ||||||| uaAGCCUUCUCCAAAAACCAGg 2 21 115 136 [mm9:7:16906100-16906121:-] 0.5000 144 7 -16.86 -0.3744 MIMAT0004523 mmu-miR-29b* 56459 Sae1 auUUGGUGGUAUACUUUGGUCg |:|| :| ||||||| uaAGCCUUCUCCAAAAACCAGg 2 21 82 103 [mm9:7:16906100-16906121:-] 0.5000 144 7 -16.86 -0.3810 MIMAT0004527 mmu-miR-124* 56459 Sae1 uaGUUCCAGGCGACACUU-GUGc | ||| : ||||||| ||| aaCCAGGAGUACUGUGAAGCACc 2 21 130 152 [mm9:7:16906084-16906106:-] 0.5000 128 0 -17.60 -0.1911 MIMAT0004527 mmu-miR-124* 56459 Sae1 uaGUUCCAGGCGACACUU-GUGc | ||| : ||||||| ||| aaCCAGGAGUACUGUGAAGCACc 2 21 97 119 [mm9:7:16906084-16906106:-] 0.5000 128 0 -17.60 -0.1951 MIMAT0004530 mmu-miR-127* 56459 Sae1 uagucuCGGGAGACUCGA-AGUc |:|:|| |||| ||| gccuuuGUCUUCGAAGCUAUCAg 2 17 83 105 [mm9:7:16913081-16913103:-] 0.5005 120 0 -18.20 -0.1467 MIMAT0004535 mmu-miR-150* 56459 Sae1 gauaggggguccggACAUGGUc ||||||| guuggucuacauaaUGUACCAa 2 9 551 572 [mm9:7:16912614-16912635:-] 0.5003 140 7 -13.01 -1.0459 MIMAT0004541 mmu-miR-188-3p 56459 Sae1 acguuUGGGACGU--AC-ACCCUc :||||||| || ||||| cagcuGCCCUGCAAGUGCUGGGAa 2 17 84 107 [mm9:7:16906129-16906152:-] 0.5000 127 0 -24.14 -0.4007 MIMAT0004541 mmu-miR-188-3p 56459 Sae1 acguuuGGGACGUAC-ACCCUc :|||| :|| ||||| ucugccUCCUGAGUGCUGGGAu 2 16 610 631 [mm9:7:16905605-16905626:-] 0.5010 123 0 -18.91 -0.2527 MIMAT0004541 mmu-miR-188-3p 56459 Sae1 acguuUGGGACGU--AC-ACCCUc :||||||| || ||||| cagcuGCCCUGCAAGUGCUGGGAa 2 17 51 74 [mm9:7:16906129-16906152:-] 0.5000 127 0 -24.14 -0.4021 MIMAT0004541 mmu-miR-188-3p 56459 Sae1 acguuuGGGACGUAC-ACCCUc :|||| :|| ||||| ucugccUCCUGAGUGCUGGGAu 2 16 577 598 [mm9:7:16905605-16905626:-] 0.5010 123 0 -18.91 -0.2572 MIMAT0004572 mmu-miR-290-3p 56459 Sae1 cccgaauuUUGAUCCG--CCGUGAAa ||:||| | ||||||| uggcaauuAAUUAGUCUUGGCACUUc 2 17 533 558 [mm9:7:16905678-16905703:-] 0.5000 155 7 -20.99 -0.2829 MIMAT0004572 mmu-miR-290-3p 56459 Sae1 cccgaauuUUGAUCCG--CCGUGAAa ||:||| | ||||||| uggcaauuAAUUAGUCUUGGCACUUc 2 17 500 525 [mm9:7:16905678-16905703:-] 0.5000 155 7 -20.99 -0.2878 MIMAT0000370 mmu-miR-292-3p 56459 Sae1 ugUGAGUU--UUGGACCGCCGUGAAa | |:|| |::|| :||||||| gcAAUUAAUUAGUCU--UGGCACUUc 2 23 535 558 [mm9:7:16905678-16905701:-] 0.5000 150 7 -16.30 -0.2829 MIMAT0000370 mmu-miR-292-3p 56459 Sae1 ugUGAGUU--UUGGACCGCCGUGAAa | |:|| |::|| :||||||| gcAAUUAAUUAGUCU--UGGCACUUc 2 23 502 525 [mm9:7:16905678-16905701:-] 0.5000 150 7 -16.30 -0.2878 MIMAT0004573 mmu-miR-293* 56459 Sae1 guuuUACAGUGUGUCAA-ACUCa ||||| : ::||| |||| ugucAUGUCUUUUGGUUGUGAGc 2 19 377 399 [mm9:7:16912787-16912809:-] 0.4968 126 0 -11.62 -0.2765 MIMAT0000376 mmu-miR-298 56459 Sae1 ccCUUCUUGUCGGGAGGAGACGg |:||| | |||: ||||||| ucGGAGAUCUGCCUGCCUCUGCc 2 22 593 615 [mm9:7:16905621-16905643:-] 0.5005 173 7 -31.16 -0.1730 MIMAT0000376 mmu-miR-298 56459 Sae1 ccCUUCUUGUCGGGAGGAGACGg |:||| | |||: ||||||| ucGGAGAUCUGCCUGCCUCUGCc 2 22 560 582 [mm9:7:16905621-16905643:-] 0.5005 173 7 -31.16 -0.1763 MIMAT0004630 mmu-miR-26b* 56459 Sae1 cucgguUCAUUACCUCU-UGUCc ||| | |||| |||| aucaauAGUUUUAGAGACACAGu 2 17 414 436 [mm9:7:16905800-16905822:-] 0.5000 120 0 -11.22 -0.3735 MIMAT0004630 mmu-miR-26b* 56459 Sae1 cucgguUCAUUACCUCU-UGUCc ||| | |||| |||| aucaauAGUUUUAGAGACACAGu 2 17 381 403 [mm9:7:16905800-16905822:-] 0.5000 120 0 -11.22 -0.3794 MIMAT0004631 mmu-miR-29a* 56459 Sae1 gacuuGUGGUUUUCUUUAGUCa :|: |||| |||||| auacuUAUGAAAAUUAAUCAGu 2 18 357 378 [mm9:7:16905858-16905879:-] 0.5000 129 6 -11.92 -0.2285 MIMAT0004631 mmu-miR-29a* 56459 Sae1 gacuuGUGGUUUUCUUUAGUCa :|: |||| |||||| auacuUAUGAAAAUUAAUCAGu 2 18 324 345 [mm9:7:16905858-16905879:-] 0.5000 129 6 -11.92 -0.2326 MIMAT0004635 mmu-miR-92a* 56459 Sae1 cauuACGGUGGUUAGGGGUGGa || |||: ||||||| gucuUGGCACUUCCCCCCACCc 2 19 546 567 [mm9:7:16905669-16905690:-] 0.5000 154 7 -23.32 -0.3017 MIMAT0004635 mmu-miR-92a* 56459 Sae1 cauuACGGUGGUUAGGGGUGGa || |||: ||||||| gucuUGGCACUUCCCCCCACCc 2 19 513 534 [mm9:7:16905669-16905690:-] 0.5000 154 7 -23.32 -0.3068 MIMAT0004636 mmu-miR-93* 56459 Sae1 gcccuucacgAUCGAGUCGUCa ||| ||||||| cuucccucuaUAG-UCAGCAGa 2 13 249 269 [mm9:7:16912917-16912937:-] 0.5005 146 7 -13.49 -0.1781 MIMAT0004636 mmu-miR-93* 56459 Sae1 gcccUUCACGAUC---GAGUC-GUCa |||| ||:| :|||| ||| ccccAAGUACUGGAAUUUCAGACAGg 2 19 309 334 [mm9:7:16905902-16905927:-] 0.5000 121 0 -15.16 -0.3449 MIMAT0004636 mmu-miR-93* 56459 Sae1 gcccUUCACGAUC---GAGUC-GUCa |||| ||:| :|||| ||| ccccAAGUACUGGAAUUUCAGACAGg 2 19 276 301 [mm9:7:16905902-16905927:-] 0.5000 121 0 -15.16 -0.3509 MIMAT0000556 mmu-miR-324-3p 56459 Sae1 ucgucGUGGACC----CCGUCACc |||: || ||||||| gcuguCACUGGGGACUGGCAGUGc 2 16 164 187 [mm9:7:16912999-16913022:-] 0.5005 142 7 -19.63 -0.1236 MIMAT0000569 mmu-miR-330* 56459 Sae1 agAGACGUCCGGGACACGAA-ACg |:| || | | |||||| || guUUUAGAGACACAGUGCUUCUGu 2 22 421 444 [mm9:7:16905792-16905815:-] 0.5000 125 0 -11.92 -0.2797 MIMAT0000569 mmu-miR-330* 56459 Sae1 agAGACGUCCGGGACACGAA-ACg |:| || | | |||||| || guUUUAGAGACACAGUGCUUCUGu 2 22 388 411 [mm9:7:16905792-16905815:-] 0.5000 125 0 -11.92 -0.2845 MIMAT0005444 mmu-miR-218-2* 56459 Sae1 gcgccacgaACUGUCUUGGUAc ||:: ||||||| uaccuuuaaUGGUUGAACCAUc 2 14 410 431 [mm9:7:16912755-16912776:-] 0.4999 149 7 -11.17 -0.7559 MIMAT0004704 mmu-miR-335-3p 56459 Sae1 ccaguccucGUUAU---UACUUUUu ||||| ||||||| uggcccauaCAAUACUUAUGAAAAu 2 14 346 370 [mm9:7:16905866-16905890:-] 0.5000 148 7 -7.93 -1.1352 MIMAT0004704 mmu-miR-335-3p 56459 Sae1 ccaguccucGUUAU---UACUUUUu ||||| ||||||| uggcccauaCAAUACUUAUGAAAAu 2 14 313 337 [mm9:7:16905866-16905890:-] 0.5000 148 7 -7.93 -1.1394 MIMAT0003409 mmu-miR-467a 56459 Sae1 gcguaUAUGUACGUCCGUGAAu || :| : ||||||| aauuaAUUAGUCUUGGCACUUc 2 18 537 558 [mm9:7:16905678-16905699:-] 0.5000 145 7 -13.03 -0.2854 MIMAT0003409 mmu-miR-467a 56459 Sae1 gcguaUAUGUACGUCCGUGAAu || :| : ||||||| aauuaAUUAGUCUUGGCACUUc 2 18 504 525 [mm9:7:16905678-16905699:-] 0.5000 145 7 -13.03 -0.2903 MIMAT0004786 mmu-miR-540-5p 56459 Sae1 ugUCU-CAGUCUCCCACUGGGAAc ||| || | | |||||||| auAGACCUCUGUUGUUGACCCUUc 2 22 307 330 [mm9:7:16912856-16912879:-] 0.5005 156 7 -17.15 -0.1749 MIMAT0003173 mmu-miR-547 56459 Sae1 gaguGA-GUUUCUACAUGGUUc || || | ||||||||| ugguCUACAUA-AUGUACCAAg 2 18 553 573 [mm9:7:16912613-16912633:-] 0.5003 154 7 -17.45 -0.7899 MIMAT0004789 mmu-miR-450a-3p 56459 Sae1 uacuuacguuucGU-AGGGGUUa || ||||||| ccacccccccgcCAUUCCCCAAg 2 11 293 315 [mm9:7:16905921-16905943:-] 0.5000 141 7 -12.07 -0.3446 MIMAT0004789 mmu-miR-450a-3p 56459 Sae1 uacuuacguuucGU-AGGGGUUa || ||||||| ccacccccccgcCAUUCCCCAAg 2 11 260 282 [mm9:7:16905921-16905943:-] 0.5000 141 7 -12.07 -0.3509 MIMAT0004790 mmu-miR-503* 56459 Sae1 gguccgucaccUUUGUUAUGAg | |||||||| caaucuggcccAUACAAUACUu 2 12 341 362 [mm9:7:16905874-16905895:-] 0.5000 147 7 -14.31 -0.9443 MIMAT0004790 mmu-miR-503* 56459 Sae1 gguccgucaccUUUGUUAUGAg | |||||||| caaucuggcccAUACAAUACUu 2 12 308 329 [mm9:7:16905874-16905895:-] 0.5000 147 7 -14.31 -0.9506 MIMAT0003373 mmu-miR-302b* 56459 Sae1 ucUUUCGUAAGGGUACAAUUUca ||| :| | || |||||| gaAAAUUAAU--CA-GUUAAAuc 3 22 365 384 [mm9:7:16905852-16905871:-] 0.5000 128 0 -5.33 -0.1347 MIMAT0003373 mmu-miR-302b* 56459 Sae1 ucUUUC-GUAA-GGGUACAAUUUCa |||| :||| || |||||| uuAAAGAUAUUAAAAAUAUUAAAGg 2 22 388 412 [mm9:7:16905824-16905848:-] 0.5000 127 6 -7.09 -0.1876 MIMAT0003373 mmu-miR-302b* 56459 Sae1 ucuuucguaaggguacAAUUUCa |||||| aaucaguuaaaucuuaUUAAAGa 2 8 372 394 [mm9:7:16905842-16905864:-] 0.5000 120 6 -6.27 -0.3768 MIMAT0003373 mmu-miR-302b* 56459 Sae1 ucUUUCGUAAGGGUACAAUUUca ||| :| | || |||||| gaAAAUUAAU--CA-GUUAAAuc 3 22 332 351 [mm9:7:16905852-16905871:-] 0.5000 128 0 -5.33 -0.1374 MIMAT0003373 mmu-miR-302b* 56459 Sae1 ucUUUC-GUAA-GGGUACAAUUUCa |||| :||| || |||||| uuAAAGAUAUUAAAAAUAUUAAAGg 2 22 355 379 [mm9:7:16905824-16905848:-] 0.5000 127 6 -7.09 -0.1911 MIMAT0003373 mmu-miR-302b* 56459 Sae1 ucuuucguaaggguacAAUUUCa |||||| aaucaguuaaaucuuaUUAAAGa 2 8 339 361 [mm9:7:16905842-16905864:-] 0.5000 120 6 -6.27 -0.3827 MIMAT0003375 mmu-miR-302c* 56459 Sae1 cgUCCAUUGGGGUACAAUUUCg || ||| :|: | |||||| ucAGUUAAAUCU-UAUUAAAGa 2 21 374 394 [mm9:7:16905842-16905862:-] 0.5000 130 6 -12.23 -0.3768 MIMAT0003375 mmu-miR-302c* 56459 Sae1 cguccauugggguacAAUUUCg |||||| aagauauuaaaaauaUUAAAGg 2 8 391 412 [mm9:7:16905824-16905845:-] 0.5000 120 6 -4.68 -0.1894 MIMAT0003375 mmu-miR-302c* 56459 Sae1 cgUCCAUUGGGGUACAAUUUCg || ||| :|: | |||||| ucAGUUAAAUCU-UAUUAAAGa 2 21 341 361 [mm9:7:16905842-16905862:-] 0.5000 130 6 -12.23 -0.3827 MIMAT0003375 mmu-miR-302c* 56459 Sae1 cguccauugggguacAAUUUCg |||||| aagauauuaaaaauaUUAAAGg 2 8 358 379 [mm9:7:16905824-16905845:-] 0.5000 120 6 -4.68 -0.1929 MIMAT0003892 mmu-miR-762 56459 Sae1 cgagacagggccGGGGUCGGGg :::|||||| guugaaccaucuUUUCAGCCCa 2 11 421 442 [mm9:7:16912744-16912765:-] 0.4999 126 6 -19.69 -0.1561 MIMAT0003736 mmu-miR-670 56459 Sae1 aaguggugUAUGUGAGUCCCUa | :| ||||||| ugucuucgAAGCUAUCAGGGAa 2 15 88 109 [mm9:7:16913077-16913098:-] 0.5005 142 7 -15.71 -0.5420 MIMAT0003894 mmu-miR-764-5p 56459 Sae1 ucCUCCUGUACAC-UCGUGg ||| || |||| ||||| agGAGUAC-UGUGAAGCACc 2 18 134 152 [mm9:7:16906084-16906102:-] 0.5000 127 0 -25.45 -0.1876 MIMAT0003894 mmu-miR-764-5p 56459 Sae1 ucCUCCUGUACAC-UCGUGg ||| || |||| ||||| agGAGUAC-UGUGAAGCACc 2 18 101 119 [mm9:7:16906084-16906102:-] 0.5000 127 0 -25.45 -0.1915 MIMAT0003741 mmu-miR-674* 56459 Sae1 aaCAAGACUCUACC-CUC-GACAc || :||: | || ||| |||| ggGUGUUGGAAGGGAGAGACUGUc 2 21 346 369 [mm9:7:16912817-16912840:-] 0.4968 123 0 -17.65 -0.1414 MIMAT0003496 mmu-miR-706 56459 Sae1 aaaaaacucugucccAAAGAGa |||||| aauguaccaagaaccUUUCUCa 2 8 563 584 [mm9:7:16912602-16912623:-] 0.5003 120 6 -6.18 -0.1181 MIMAT0003496 mmu-miR-706 56459 Sae1 aaaaaacucUGUCCCAAAGAGa ||| ||||||| cccccacccACAAAGUUUCUCu 2 14 559 580 [mm9:7:16905656-16905677:-] 0.5000 149 7 -12.34 -0.4847 MIMAT0003496 mmu-miR-706 56459 Sae1 aaaaaacucUGUCCCAAAGAGa ||| ||||||| cccccacccACAAAGUUUCUCu 2 14 526 547 [mm9:7:16905656-16905677:-] 0.5000 149 7 -12.34 -0.4915 MIMAT0003499 mmu-miR-709 56459 Sae1 agGA-GGACGGAGACGGAGg || |||||||||||||| auCUGCCUGCCUCUGCCUCc 2 18 599 618 [mm9:7:16905618-16905637:-] 0.5010 176 7 -39.05 -0.1635 MIMAT0003499 mmu-miR-709 56459 Sae1 agGA-GGACGGAGACGGAGg || |||||||||||||| auCUGCCUGCCUCUGCCUCc 2 18 566 585 [mm9:7:16905618-16905637:-] 0.5010 176 7 -39.05 -0.1667 MIMAT0003508 mmu-miR-501-5p 56459 Sae1 aaagugggucCCUGUUUCCUAa |||:||||||| cuugguugcuGGAUAAAGGAUg 2 13 742 763 [mm9:7:16912423-16912444:-] 0.5367 156 7 -15.60 -0.8448 MIMAT0003508 mmu-miR-501-5p 56459 Sae1 aaagugggucccuGUUUCCUaa :|||||| auauuaaaaauauUAAAGGAau 3 10 394 415 [mm9:7:16905821-16905842:-] 0.5000 121 0 -7.03 -0.1165 MIMAT0003508 mmu-miR-501-5p 56459 Sae1 aaagugggucccuGUUUCCUaa :|||||| auauuaaaaauauUAAAGGAau 3 10 361 382 [mm9:7:16905821-16905842:-] 0.5000 121 0 -7.03 -0.1188 MIMAT0003781 mmu-miR-676* 56459 Sae1 cgUUCAGGAUUC----CAACAUCUCa |:||| |:| |||||||| ggAGGUCAGAGGACAACUUGUAGAGa 2 21 449 474 [mm9:7:16905762-16905787:-] 0.5000 147 7 -19.57 -0.7501 MIMAT0003781 mmu-miR-676* 56459 Sae1 cgUUCAGGAUUC----CAACAUCUCa |:||| |:| |||||||| ggAGGUCAGAGGACAACUUGUAGAGa 2 21 416 441 [mm9:7:16905762-16905787:-] 0.5000 147 7 -19.57 -0.7574 MIMAT0004238 mmu-miR-743a 56459 Sae1 agaUGAGUCGA-ACCACAGAAAg || |||:| | ||||||| gucACCCAGUUGUCAUGUCUUUu 2 20 367 389 [mm9:7:16912797-16912819:-] 0.4968 158 7 -15.65 -0.3683 MIMAT0004238 mmu-miR-743a 56459 Sae1 agaugagucgaacCACAGAAAg |||||||| ggaugauaauaaaGUGUCUUUc 2 10 759 780 [mm9:7:16912406-16912427:-] 0.5367 145 7 -13.39 -0.3451 MIMAT0004840 mmu-miR-743b-3p 56459 Sae1 agauaaGUC-GUACUACAGAAAg ||| ::| |||||||| gucaccCAGUUGUCAUGUCUUUu 2 17 367 389 [mm9:7:16912797-16912819:-] 0.4968 155 7 -13.03 -0.3712 MIMAT0004840 mmu-miR-743b-3p 56459 Sae1 agauaaGUCGUACUACAGAAAg :| :| :||||||| ggaugaUAAUAAAGUGUCUUUc 2 17 759 780 [mm9:7:16912406-16912427:-] 0.5367 144 7 -11.28 -0.3422 MIMAT0004845 mmu-miR-881* 56459 Sae1 ucuacacugaCAAUAGAGAGAc ||| ||||||| cacccacaaaGUU-UCUCUCUg 2 13 563 583 [mm9:7:16905653-16905673:-] 0.5000 146 7 -15.52 -0.5070 MIMAT0004845 mmu-miR-881* 56459 Sae1 ucuacacugaCAAUAGAGAGAc ||| ||||||| cacccacaaaGUU-UCUCUCUg 2 13 530 550 [mm9:7:16905653-16905673:-] 0.5000 146 7 -15.52 -0.5139 MIMAT0004846 mmu-miR-881 56459 Sae1 agauaagucuUUUCUGUGUCAa |:||||||||| caauaguuuuAGAGACACAGUg 2 13 416 437 [mm9:7:16905799-16905820:-] 0.5000 156 7 -18.06 -0.2457 MIMAT0004846 mmu-miR-881 56459 Sae1 agauaagucuUUUCUGUGUCAa |:||||||||| caauaguuuuAGAGACACAGUg 2 13 383 404 [mm9:7:16905799-16905820:-] 0.5000 156 7 -18.06 -0.2501 MIMAT0004846 mmu-miR-881 56459 Sae1 agauaaGUCUU-UUCUGU-GUCAa ||||| |||||| |||| aaaagcCAGAAGAAGACAUCAGUu 2 17 8 31 [mm9:7:16906172-16906195:-] 0.5000 135 0 -18.99 -0.1871 MIMAT0004868 mmu-miR-343 56459 Sae1 agACCCGUGUACUUCCCUCu ||||::: |||||||| ccUGGGUGUUGGAAGGGAGa 2 19 343 362 [mm9:7:16912824-16912843:-] 0.4968 162 7 -28.96 -0.1400 MIMAT0004890 mmu-miR-509-5p 56459 Sae1 uaCUAAC--GGUGUAAGA-CCUCAu | ||| |: | |||| ||||| ugGUUUGGUCUUCCUUCUAGGAGUa 2 21 687 711 [mm9:7:16912475-16912499:-] 0.5001 123 0 -17.15 -0.3880 MIMAT0004933 mmu-miR-878-3p 56459 Sae1 agaUGGGUCACACCACAGUACg ||||||| ||||||| gucACCCAGU----UGUCAUGu 2 20 367 384 [mm9:7:16912802-16912819:-] 0.4968 154 7 -22.76 -0.2125 MIMAT0004935 mmu-miR-872* 56459 Sae1 ucCUCC-GAUG-ACG----UUAUCAAGu |||| | || ||: |||||||| caGAGGACAACUUGUAGAGAAUAGUUCu 2 21 455 482 [mm9:7:16905754-16905781:-] 0.5000 149 7 -16.85 -0.4793 MIMAT0004935 mmu-miR-872* 56459 Sae1 ucCUCC-GAUG-ACG----UUAUCAAGu |||| | || ||: |||||||| caGAGGACAACUUGUAGAGAAUAGUUCu 2 21 422 449 [mm9:7:16905754-16905781:-] 0.5000 149 7 -16.85 -0.4861 MIMAT0004938 mmu-miR-875-3p 56459 Sae1 guaucggaGUCAUAAAAGUCc || | ||||||| gguugaacCA-UCUUUUCAGc 2 14 420 439 [mm9:7:16912747-16912766:-] 0.4999 143 7 -8.36 -0.2855 MIMAT0004862 mmu-miR-877* 56459 Sae1 accCUCCUCCCUCU--UCUCCUGu | ||| ||||: ||||||| ucuGUGGAUGGAGGUCAGAGGACa 2 20 440 463 [mm9:7:16905773-16905796:-] 0.5000 162 7 -28.34 -0.5740 MIMAT0004862 mmu-miR-877* 56459 Sae1 accCUCCUCCCUCU--UCUCCUGu | ||| ||||: ||||||| ucuGUGGAUGGAGGUCAGAGGACa 2 20 407 430 [mm9:7:16905773-16905796:-] 0.5000 162 7 -28.34 -0.5812 MIMAT0005834 mmu-miR-466i 56459 Sae1 aucacacauACACACACACAUa || | ||||||| -------gcUGAG-GUGUGUAc 2 14 1 14 [mm9:7:16913172-16913185:-] 0.5397 143 7 -9.05 -0.1528 MIMAT0005847 mmu-miR-1190 56459 Sae1 cuGUCUCCCCU-UGG-AGUCGACu ::||| ||| ::: ||||||| ccUGGAGCGGAUGUUAUCAGCUGc 2 21 67 90 [mm9:7:16906146-16906169:-] 0.5000 154 7 -19.79 -0.2028 MIMAT0005847 mmu-miR-1190 56459 Sae1 cuGUCUCCCCU-UGG-AGUCGACu ::||| ||| ::: ||||||| ccUGGAGCGGAUGUUAUCAGCUGc 2 21 34 57 [mm9:7:16906146-16906169:-] 0.5000 154 7 -19.79 -0.1844 MIMAT0005857 mmu-miR-1196 56459 Sae1 uccgucuccgUCCAUCUAAa | ||||||| uauuucuaaaAAGUAGAUUu 2 11 450 469 [mm9:7:16912717-16912736:-] 0.4999 142 7 -8.00 -0.9266 MIMAT0007863 mmu-miR-1902 56459 Sae1 uucAGUACGGAUGACGUGGAGa | || | :: ||||||| ugaUAAU-CACGUGGCACCUCu 2 20 127 147 [mm9:7:16913039-16913059:-] 0.5005 141 7 -16.93 -0.2697 MIMAT0007868 mmu-miR-1903 56459 Sae1 acaGAGUCCUUCU--UCUUCUUCc | ||| || : |||||||| gugCACAGAAAAGCCAGAAGAAGa 2 20 33 56 [mm9:7:16906180-16906203:-] 0.5000 154 7 -14.60 -0.6076 MIMAT0007868 mmu-miR-1903 56459 Sae1 acaGAGUCCUUCU--UCUUCUUCc | ||| || : |||||||| -ugCACAGAAAAGCCAGAAGAAGa 2 20 1 23 [mm9:7:16906180-16906202:-] 0.5000 154 7 -14.60 -0.4354 MIMAT0007877 mmu-miR-1894-5p 56459 Sae1 ucuCCGUCCACCAUCCC-CUCUc || | ||| |||| |||| ccuGGGUGUUGGAAGGGAGAGAc 2 20 343 365 [mm9:7:16912821-16912843:-] 0.4968 127 0 -22.53 -0.2064 MIMAT0009390 mmu-miR-1927 56459 Sae1 agUCAGGGAUUGUAGGUCUC-CAg | |:| |:|::| ||||| || auACUUCAUGAUGU-CAGAGUGUc 2 22 206 228 [mm9:7:16912958-16912980:-] 0.5005 123 0 -14.73 -0.2665 MIMAT0009392 mmu-miR-1929 56459 Sae1 gagaCGAGAUAUUUCAGGAUCUu ||| |:||| ||||||| gcagGCU-UGUAA--UCCUAGAu 2 20 488 507 [mm9:7:16912679-16912698:-] 0.5003 154 7 -14.90 -0.2844 MIMAT0009399 mmu-miR-1935 56459 Sae1 ucUCUAGGCGGUCGGAGACGGa |||||:||| ||||||||| ggAGAUCUGCCUGCCUCUGCCu 2 21 595 616 [mm9:7:16905620-16905641:-] 0.5005 188 7 -42.91 -0.1066 MIMAT0009399 mmu-miR-1935 56459 Sae1 ucUCUAGGCGGUCGGAGACGGa |||||:||| ||||||||| ggAGAUCUGCCUGCCUCUGCCu 2 21 562 583 [mm9:7:16905620-16905641:-] 0.5005 188 7 -42.91 -0.1087 MIMAT0009400 mmu-miR-1936 56459 Sae1 cggucaagugucguccAGUCAAu |||||| uacuuaugaaaauuaaUCAGUUa 2 8 358 380 [mm9:7:16905856-16905878:-] 0.5000 120 6 -8.32 -0.3818 MIMAT0009400 mmu-miR-1936 56459 Sae1 cggucaagugucguccAGUCAAu |||||| uacuuaugaaaauuaaUCAGUUa 2 8 325 347 [mm9:7:16905856-16905878:-] 0.5000 120 6 -8.32 -0.3878 MIMAT0009403 mmu-miR-1939 56459 Sae1 cacguaaccgUCCCUUAGcu | |||||| aaaaauauuaAAGGAAUCaa 3 11 399 418 [mm9:7:16905818-16905837:-] 0.5000 122 0 -7.12 -0.2526 MIMAT0009403 mmu-miR-1939 56459 Sae1 cacguaaccgUCCCUUAGcu | |||||| aaaaauauuaAAGGAAUCaa 3 11 366 385 [mm9:7:16905818-16905837:-] 0.5000 122 0 -7.12 -0.2571 MIMAT0009404 mmu-miR-1940 56459 Sae1 uugACGAGGUGGAAGAGUCAG-GAGGUa || |||| | | ||| ||||| cugUGAAGCACC-UGGCCGUCUCUCCAg 2 25 141 167 [mm9:7:16906069-16906095:-] 0.5000 122 0 -24.05 -0.1909 MIMAT0009404 mmu-miR-1940 56459 Sae1 uugACGAGGUGGAAGAGUCAG-GAGGUa || |||| | | ||| ||||| cugUGAAGCACC-UGGCCGUCUCUCCAg 2 25 108 134 [mm9:7:16906069-16906095:-] 0.5000 122 0 -24.05 -0.1949 MIMAT0009409 mmu-miR-1944 56459 Sae1 uuaGUCUUGAACUGUAAGU--CGUGUCUc || |: || ::| :| ||||||| gggCACCAUGUG-UGUCUAGUGCACAGAa 2 25 15 42 [mm9:7:16906194-16906221:-] 0.5000 145 7 -15.95 -0.7692 MIMAT0009409 mmu-miR-1944 56459 Sae1 uuagucuugaacuguaaguCGUGUCUc ||||||| ------------------uGCACAGAa 2 9 1 9 [mm9:7:16906194-16906202:-] 0.5000 140 7 -10.31 -0.3601 MIMAT0009415 mmu-miR-1948 56459 Sae1 gacaUGCUCACGAGACGGAUUu || || | ||||||| agcaACAAGAAAU-UGCCUAAu 2 19 210 230 [mm9:7:16906006-16906026:-] 0.5000 144 7 -11.14 -0.8942 MIMAT0009415 mmu-miR-1948 56459 Sae1 gacaUGCUCACGAGACGGAUUu || || | ||||||| agcaACAAGAAAU-UGCCUAAu 2 19 177 197 [mm9:7:16906006-16906026:-] 0.5000 144 7 -11.14 -0.9017 MIMAT0009417 mmu-miR-1950 56459 Sae1 acUGGUAUAGGAAU-CUAC-GUCu |:|||| |:| | |||| ||| gcAUCAUA-CUUCAUGAUGUCAGa 2 21 201 223 [mm9:7:16912963-16912985:-] 0.5005 125 0 -15.79 -0.4969 MIMAT0009426 mmu-miR-1955 56459 Sae1 uuuuCGACGUCACGUAGGACCC-UGa |||| :|| ::| ||||| || ----GCUGAGGUUUGU-CUGGGCACc 2 22 1 21 [mm9:7:16906215-16906229,16913180-16913185:-] 0.5441 127 0 -19.55 -0.2342 MIMAT0009428 mmu-miR-1956 56459 Sae1 aggcGACUGAGUCGGGACCUGa || || || |||||||| agguCUCACCCAUCCCUGGACu 2 19 234 255 [mm9:7:16905981-16906002:-] 0.5000 166 7 -23.24 -0.1612 MIMAT0009428 mmu-miR-1956 56459 Sae1 aggcGACUGAGUCGGGACCUGa || || || |||||||| agguCUCACCCAUCCCUGGACu 2 19 201 222 [mm9:7:16905981-16906002:-] 0.5000 166 7 -23.24 -0.1646 MIMAT0009439 mmu-miR-1966 56459 Sae1 cugaGAGAGGACUCGGUCGAGGGAa | | :|||: : ||||||| guggCACCUCUGGCAUUGCUCCCUu 2 22 137 161 [mm9:7:16913025-16913049:-] 0.5005 153 7 -25.06 -0.2624 MIMAT0009441 mmu-miR-1968 56459 Sae1 ucaggugguaggAAUUGUCGACGu ||| ||||||| cuggagcggaugUUAUCAGCUGCc 2 13 68 91 [mm9:7:16906145-16906168:-] 0.5000 152 7 -13.69 -0.2127 MIMAT0009441 mmu-miR-1968 56459 Sae1 ucaggugguaggAAUUGUCGACGu ||| ||||||| cuggagcggaugUUAUCAGCUGCc 2 13 35 58 [mm9:7:16906145-16906168:-] 0.5000 152 7 -13.69 -0.1826 MIMAT0009461 mmu-miR-1982.2 56459 Sae1 gacacccUCUUGUAUCCCACu |||:: ||||||| auauuccAGAGU-UAGGGUGg 2 15 601 620 [mm9:7:16912566-16912585:-] 0.5003 148 7 -16.89 -0.1190 MIMAT0011211 mmu-miR-2135 56459 Sae1 caaagccgggguUCUGGAGa ||||||| agaacugagaauAGACCUCu 2 9 297 316 [mm9:7:16912870-16912889:-] 0.5005 140 7 -13.42 -0.5028 MIMAT0011222 mmu-miR-2146 56459 Sae1 guguaccUUGGGAAGAGGUg || ||||||||| ucaaccuAAGCCUUCUCCAa 2 14 109 128 [mm9:7:16906108-16906127:-] 0.5000 157 7 -18.26 -0.3169 MIMAT0011222 mmu-miR-2146 56459 Sae1 guguaccUUGGGAAGAGGUg || ||||||||| ucaaccuAAGCCUUCUCCAa 2 14 76 95 [mm9:7:16906108-16906127:-] 0.5000 157 7 -18.26 -0.3228 MIMAT0014852 mmu-miR-3072* 56459 Sae1 ggacgggagGGAGCCCCAGGGa |: ||||||||| aucagggaaCUGCGGGGUCCCa 2 14 101 122 [mm9:7:16913064-16913085:-] 0.5005 153 7 -24.90 -0.3051 MIMAT0015641 mmu-miR-3470b 56459 Sae1 ggucGGACCAGAUGUCUCACu | || | | ||||||| acuuCAUGAUGU-CAGAGUGu 2 18 208 227 [mm9:7:16912959-16912978:-] 0.5005 147 7 -13.70 -0.3852 MIMAT0015645 mmu-miR-3473 56459 Sae1 ccGACUCGGUAGAGAGGu ||| |||:||||||| acCUG-GCCGUCUCUCCa 2 17 150 166 [mm9:7:16906070-16906086:-] 0.5000 162 7 -29.04 -0.2072 MIMAT0015645 mmu-miR-3473 56459 Sae1 ccgacucgguAGAGAGGu ||||||| agagaauaguUCUCUCCu 2 9 470 487 [mm9:7:16905749-16905766:-] 0.5000 140 7 -15.15 -0.7816 MIMAT0015645 mmu-miR-3473 56459 Sae1 ccGACUCGGUAGAGAGGu ||| |||:||||||| acCUG-GCCGUCUCUCCa 2 17 117 133 [mm9:7:16906070-16906086:-] 0.5000 162 7 -29.04 -0.2115 MIMAT0015645 mmu-miR-3473 56459 Sae1 ccgacucgguAGAGAGGu ||||||| agagaauaguUCUCUCCu 2 9 437 454 [mm9:7:16905749-16905766:-] 0.5000 140 7 -15.15 -0.7889 MIMAT0000126 mmu-miR-27b 56459 Sae1 cgUCUUGAAUC-GGUGACACUu | ||| :| :||||||| caAAAACCAGGAGUACUGUGAa 2 20 126 147 [mm9:7:16906089-16906110:-] 0.5000 146 7 -16.34 -0.3536 MIMAT0000126 mmu-miR-27b 56459 Sae1 cgUCUUGAAUC-GGUGACACUu | ||| :| :||||||| caAAAACCAGGAGUACUGUGAa 2 20 93 114 [mm9:7:16906089-16906110:-] 0.5000 146 7 -16.34 -0.3600 MIMAT0000127 mmu-miR-29b 56459 Sae1 uugugaCUAAAGUUUAC-CACGAu |||| |::|| ||||| ugcuggGAUUAAAGGUGUGUGCUa 2 18 623 646 [mm9:7:16905590-16905613:-] 0.5010 125 0 -18.87 -0.4514 MIMAT0000127 mmu-miR-29b 56459 Sae1 uugugaCUAAAGUUUAC-CACGAu |||| |::|| ||||| ugcuggGAUUAAAGGUGUGUGCUa 2 18 590 613 [mm9:7:16905590-16905613:-] 0.5010 125 0 -18.87 -0.4579 MIMAT0000133 mmu-miR-101a 56459 Sae1 aaGUCAAUAGU-GUCAUGACAu || | || |||||||| ucCAAAAACCAGGAGUACUGUg 2 20 124 145 [mm9:7:16906091-16906112:-] 0.5000 146 7 -13.84 -0.2939 MIMAT0000133 mmu-miR-101a 56459 Sae1 aaGUCAAUAGU-GUCAUGACAu || | || |||||||| ucCAAAAACCAGGAGUACUGUg 2 20 91 112 [mm9:7:16906091-16906112:-] 0.5000 146 7 -13.84 -0.2995 MIMAT0004528 mmu-miR-125a-3p 56459 Sae1 ccgaggGUUCU--UGG---AGUGGACa ||||: ||| ||||||| uguguaCAAGGCCACCGAGUCACCUGc 2 17 8 34 [mm9:7:16913152-16913178:-] 0.5397 146 7 -25.17 -0.1156 MIMAT0000146 mmu-miR-134 56459 Sae1 ggggagaccaguuGGUCAGUGu |||||||| ccuggccgucucuCCAGUCACc 2 10 151 172 [mm9:7:16906064-16906085:-] 0.5000 145 7 -21.67 -0.2865 MIMAT0000146 mmu-miR-134 56459 Sae1 ggggagaccaguuGGUCAGUGu |||||||| ccuggccgucucuCCAGUCACc 2 10 118 139 [mm9:7:16906064-16906085:-] 0.5000 145 7 -21.67 -0.2920 MIMAT0000149 mmu-miR-137 56459 Sae1 gaUGCGCAUAAGAAUUCG-UUAUu |||| |: |: | ||| |||| caACGC-UGCUUGUUAGCAAAUAu 2 22 178 200 [mm9:7:16906036-16906058:-] 0.5000 123 0 -10.95 -0.5590 MIMAT0000149 mmu-miR-137 56459 Sae1 gaUGCGCAUAAGAAUUCG-UUAUu |||| |: |: | ||| |||| caACGC-UGCUUGUUAGCAAAUAu 2 22 145 167 [mm9:7:16906036-16906058:-] 0.5000 123 0 -10.95 -0.5670 MIMAT0000153 mmu-miR-141 56459 Sae1 gguagaaAUGGUCUGU-CACAAu | :|||||| ||||| acuggaaUUUCAGACAGGUGUUa 2 16 317 339 [mm9:7:16905897-16905919:-] 0.5000 127 0 -19.13 -0.3669 MIMAT0000153 mmu-miR-141 56459 Sae1 gguagaaAUGGUCUGU-CACAAu | :|||||| ||||| acuggaaUUUCAGACAGGUGUUa 2 16 284 306 [mm9:7:16905897-16905919:-] 0.5000 127 0 -19.13 -0.3730 MIMAT0000157 mmu-miR-145 56459 Sae1 uccCUAAGGACCCUUUUGAC-CUg | | ||| |||:||||| || aguGCUGCCU-GGAGAACUGAGAa 2 21 285 307 [mm9:7:16912879-16912901:-] 0.5005 130 0 -20.53 -0.2326 MIMAT0000158 mmu-miR-146a 56459 Sae1 uuGGGUACCUUAAGUCAAGAGu |:::| ||: :||||||| aaCUUGUAGAGAAUAGUUCUCu 2 21 463 484 [mm9:7:16905752-16905773:-] 0.5000 156 7 -17.63 -0.5878 MIMAT0000158 mmu-miR-146a 56459 Sae1 uuGGGUACCUUAAGUCAAGAGu |:::| ||: :||||||| aaCUUGUAGAGAAUAGUUCUCu 2 21 430 451 [mm9:7:16905752-16905773:-] 0.5000 156 7 -17.63 -0.5951 MIMAT0000159 mmu-miR-149 56459 Sae1 cccucacuucugugccUCGGUCu |||||| ------ugcacagaaaAGCCAGa 2 8 1 17 [mm9:7:16906186-16906202:-] 0.5000 120 6 -14.56 -0.1015 MIMAT0000163 mmu-miR-153 56459 Sae1 cuAGUGAA--AACACU--GAUACGUu || :|| |||||| ||||||| ugUCUUUUGGUUGUGAGCCUAUGCAc 2 21 382 407 [mm9:7:16912779-16912804:-] 0.4983 162 7 -15.47 -0.1988 MIMAT0000163 mmu-miR-153 56459 Sae1 cuaGU-GAAAACACUGAU-ACGUu || | | |||| ||| |||| gggCACCAUGUGUGUCUAGUGCAc 2 20 15 38 [mm9:7:16906198-16906221:-] 0.5000 126 0 -14.36 -0.1908 MIMAT0000212 mmu-miR-183 56459 Sae1 ucacuuAAGAUGGUCA-CGGUAu |||| :| || ||||| caaaguUUCUCUCUGUAGCCAUa 2 17 569 591 [mm9:7:16905645-16905667:-] 0.5000 124 0 -15.75 -0.3359 MIMAT0000212 mmu-miR-183 56459 Sae1 ucacuuAAGAUGGUCA-CGGUAu |||| :| || ||||| caaaguUUCUCUCUGUAGCCAUa 2 17 536 558 [mm9:7:16905645-16905667:-] 0.5000 124 0 -15.75 -0.3415 MIMAT0000214 mmu-miR-185 56459 Sae1 agUCCUUGACGGAAAGAGAGGu || | ||| | ||||||| gaAGCACCUGGCCGUCUCUCCa 2 21 145 166 [mm9:7:16906070-16906091:-] 0.5000 160 7 -20.52 -0.2053 MIMAT0000214 mmu-miR-185 56459 Sae1 agUC-CUUGACGGAAAGAGAGGu || |||: | |||||||| guAGAGAAUAG---UUCUCUCCu 2 21 468 487 [mm9:7:16905749-16905768:-] 0.5000 147 7 -17.29 -0.7780 MIMAT0000214 mmu-miR-185 56459 Sae1 agUCCUUGACGGAAAGAGAGGu || | ||| | ||||||| gaAGCACCUGGCCGUCUCUCCa 2 21 112 133 [mm9:7:16906070-16906091:-] 0.5000 160 7 -20.52 -0.2096 MIMAT0000214 mmu-miR-185 56459 Sae1 agUC-CUUGACGGAAAGAGAGGu || |||: | |||||||| guAGAGAAUAG---UUCUCUCCu 2 21 435 454 [mm9:7:16905749-16905768:-] 0.5000 147 7 -17.29 -0.7852 MIMAT0000223 mmu-miR-193 56459 Sae1 ugACCCUGAAACAUCCGG-UCAa || | ||| :|||| ||| acUGUAAAUUUCAGGGCCAAGUu 2 21 531 553 [mm9:7:16912633-16912655:-] 0.5003 120 0 -15.10 -0.2165 MIMAT0000224 mmu-miR-194 56459 Sae1 aggugUACCUCAACGACAAUGu :|||:| ||||||| uuaggGUGGGG-CACUGUUACc 2 18 612 632 [mm9:7:16912554-16912574:-] 0.5003 147 7 -16.91 -0.1895 MIMAT0000237 mmu-miR-204 56459 Sae1 uccGUAUCCUACUGUUUCCCuu || | || |:|||||| ucuCAAAAUAUAAUAAAGGGca 3 20 580 601 [mm9:7:16912585-16912606:-] 0.5003 139 0 -9.88 -0.1282 MIMAT0000366 mmu-miR-290-5p 56459 Sae1 uuucaCGGGGGUAUCAAAC-UCa |||: : ||||||| || gggcaGCCUGUCUAGUUUGUAGa 2 18 715 737 [mm9:7:16912449-16912471:-] 0.5001 125 0 -15.53 -0.3291 MIMAT0000366 mmu-miR-290-5p 56459 Sae1 uuucACGGGGGUAUCAA-ACUCa ||:|::: |:||| |||| gucaUGUCUUU-UGGUUGUGAGc 2 19 378 399 [mm9:7:16912787-16912808:-] 0.4968 120 0 -14.88 -0.2862 MIMAT0000369 mmu-miR-292-5p 56459 Sae1 guUUUC-UCGG--GGGUCAAAC-UCa |::| |||| :|:|||||| || ugAGGGCAGCCUGUCUAGUUUGUAGa 2 21 712 737 [mm9:7:16912449-16912474:-] 0.5001 126 0 -20.54 -0.3318 MIMAT0000519 mmu-miR-200a 56459 Sae1 uguagcaAUGGUCUGU-CACAAu | :|||||| ||||| acuggaaUUUCAGACAGGUGUUa 2 16 317 339 [mm9:7:16905897-16905919:-] 0.5000 127 0 -18.40 -0.3669 MIMAT0000519 mmu-miR-200a 56459 Sae1 uguagcaAUGGUCUGU-CACAAu | :|||||| ||||| acuggaaUUUCAGACAGGUGUUa 2 16 284 306 [mm9:7:16905897-16905919:-] 0.5000 127 0 -18.40 -0.3730 MIMAT0000528 mmu-miR-18a 56459 Sae1 gauagacgugaucUACGUGGAAu ||||||||| ugguugugagccuAUGCACCUUa 2 11 389 411 [mm9:7:16912775-16912797:-] 0.4983 150 7 -19.44 -0.8612 MIMAT0000533 mmu-miR-26a 56459 Sae1 ucggaUAGGACCUAAUGA-ACUu | || ||| |||| ||| ccaaaAACCAGGAGUACUGUGAa 2 18 125 147 [mm9:7:16906089-16906111:-] 0.5000 125 0 -13.30 -0.1765 MIMAT0000533 mmu-miR-26a 56459 Sae1 ucggaUAGGACCUAAUGA-ACUu | || ||| |||| ||| ccaaaAACCAGGAGUACUGUGAa 2 18 92 114 [mm9:7:16906089-16906111:-] 0.5000 125 0 -13.30 -0.1803 MIMAT0000534 mmu-miR-26b 56459 Sae1 uggaUAGGACUUAAUGA-ACUu | || |:| |||| ||| caaaAACCAGGAGUACUGUGAa 2 18 126 147 [mm9:7:16906089-16906110:-] 0.5000 121 0 -10.49 -0.1765 MIMAT0000534 mmu-miR-26b 56459 Sae1 uggaUAGGACUUAAUGA-ACUu | || |:| |||| ||| caaaAACCAGGAGUACUGUGAa 2 18 93 114 [mm9:7:16906089-16906110:-] 0.5000 121 0 -10.49 -0.1803 MIMAT0000535 mmu-miR-29a 56459 Sae1 auuggCUAAAGUCUAC-CACGAu |||| ||:|| ||||| gcuggGAUUAAAGGUGUGUGCUa 2 18 624 646 [mm9:7:16905590-16905612:-] 0.5010 129 0 -20.82 -0.4514 MIMAT0000535 mmu-miR-29a 56459 Sae1 auuggCUAAAGUCUAC-CACGAu |||| ||:|| ||||| gcuggGAUUAAAGGUGUGUGCUa 2 18 591 613 [mm9:7:16905590-16905612:-] 0.5010 129 0 -20.82 -0.4579 MIMAT0000536 mmu-miR-29c 56459 Sae1 auuggCUAAAGUUUAC-CACGAu |||| |::|| ||||| gcuggGAUUAAAGGUGUGUGCUa 2 18 624 646 [mm9:7:16905590-16905612:-] 0.5010 125 0 -18.22 -0.4514 MIMAT0000536 mmu-miR-29c 56459 Sae1 auuggCUAAAGUUUAC-CACGAu |||| |::|| ||||| gcuggGAUUAAAGGUGUGUGCUa 2 18 591 613 [mm9:7:16905590-16905612:-] 0.5010 125 0 -18.22 -0.4579 MIMAT0000537 mmu-miR-27a 56459 Sae1 cgccUUGAAUC-GGUGACACUu ||| :| :||||||| caaaAACCAGGAGUACUGUGAa 2 18 126 147 [mm9:7:16906089-16906110:-] 0.5000 144 7 -15.43 -0.3536 MIMAT0000537 mmu-miR-27a 56459 Sae1 cgccUUGAAUC-GGUGACACUu ||| :| :||||||| caaaAACCAGGAGUACUGUGAa 2 18 93 114 [mm9:7:16906089-16906110:-] 0.5000 144 7 -15.43 -0.3600 MIMAT0000542 mmu-miR-34a 56459 Sae1 ugUUGGUCGAUUCUGU-GACGGu ::||| | :|| || ||||| aaGGCCA-CCGAGUCACCUGCCc 2 21 15 36 [mm9:7:16913150-16913171:-] 0.4912 122 0 -16.53 -0.3397 MIMAT0000555 mmu-miR-324-5p 56459 Sae1 ugugGUUACGGGAUC-----CCCUACGc :||| ||||| ||||||| cuugUAAU--CCUAGAUGUUGGGAUGCc 2 20 493 518 [mm9:7:16912668-16912693:-] 0.5003 143 7 -19.29 -0.2003 MIMAT0000565 mmu-miR-328 56459 Sae1 ugccuucccgucucUCCCGGUc ||||||| uuacuguaaauuucAGGGCCAa 2 9 529 550 [mm9:7:16912636-16912657:-] 0.5003 140 7 -12.20 -0.5808 MIMAT0000567 mmu-miR-329 56459 Sae1 uuuuuccaauCGAC-CCACACAa |||| ||||||| ----------GCUGAGGUGUGUa 2 13 1 13 [mm9:7:16913173-16913185:-] 0.5397 151 7 -16.83 -0.6524 MIMAT0000567 mmu-miR-329 56459 Sae1 uuuuuccaaucgacCCACACAa ||||||| gugcugggauuaaaGGUGUGUg 2 9 622 643 [mm9:7:16905593-16905614:-] 0.5010 140 7 -13.86 -0.1535 MIMAT0000567 mmu-miR-329 56459 Sae1 uuuuuccaaucgacCCACACAa ||||||| gugcugggauuaaaGGUGUGUg 2 9 589 610 [mm9:7:16905593-16905614:-] 0.5010 140 7 -13.86 -0.1565 MIMAT0000616 mmu-miR-101b 56459 Sae1 aaGUCGAUAGU-GUCAUGACAu || | || |||||||| ucCAAAAACCAGGAGUACUGUg 2 20 124 145 [mm9:7:16906091-16906112:-] 0.5000 146 7 -13.03 -0.2914 MIMAT0000616 mmu-miR-101b 56459 Sae1 aaGUCGAUAGU-GUCAUGACAu || | || |||||||| ucCAAAAACCAGGAGUACUGUg 2 20 91 112 [mm9:7:16906091-16906112:-] 0.5000 146 7 -13.03 -0.2970 MIMAT0000668 mmu-miR-211 56459 Sae1 uccGUUUCCUACUGUUUCCCuu |||| || |:|||||| ucuCAAAAUAUAAUAAAGGGca 3 20 580 601 [mm9:7:16912585-16912606:-] 0.5003 147 0 -13.56 -0.1282 MIMAT0000677 mmu-miR-7a 56459 Sae1 uguuguuuuaguGAUCAGAAGGu :|:||||||| ggggcaguugguUUGGUCUUCCu 2 12 679 701 [mm9:7:16912485-16912507:-] 0.5002 147 7 -18.65 -0.2088 MIMAT0000678 mmu-miR-7b 56459 Sae1 uguuguuuuaguguUCAGAAGGu :||||||| ggggcaguugguuuGGUCUUCCu 2 10 679 701 [mm9:7:16912485-16912507:-] 0.5002 141 7 -15.18 -0.2088 MIMAT0004684 mmu-miR-362-3p 56459 Sae1 acuuaggaacuugUCCACACAa |||||||| ---------gcugAGGUGUGUa 2 10 1 13 [mm9:7:16913173-16913185:-] 0.5397 145 7 -12.62 -0.6562 MIMAT0004684 mmu-miR-362-3p 56459 Sae1 acUUAGGAACUUG---UCCACACAa |:| || |:|: |||||||| ugAGUGCUGGGAUUAAAGGUGUGUg 2 21 619 643 [mm9:7:16905593-16905617:-] 0.5010 155 7 -21.45 -0.1565 MIMAT0004684 mmu-miR-362-3p 56459 Sae1 acUUAGGAACUUG---UCCACACAa |:| || |:|: |||||||| ugAGUGCUGGGAUUAAAGGUGUGUg 2 21 586 610 [mm9:7:16905593-16905617:-] 0.5010 155 7 -21.45 -0.1595 MIMAT0000711 mmu-miR-365 56459 Sae1 uaUUC--CUAAA--A--AUCCCC-GUAAu ||| ||||| | |||||| |||| aaAAGUAGAUUUAAUGCUAGGGGCCAUUa 2 21 458 486 [mm9:7:16912700-16912728:-] 0.5001 125 0 -16.96 -0.5942 MIMAT0000747 mmu-miR-382 56459 Sae1 gcuuagguggugCUUGUUGAAg |:||||||| auggaggucagaGGACAACUUg 2 11 447 468 [mm9:7:16905768-16905789:-] 0.5000 146 7 -15.78 -0.2297 MIMAT0000747 mmu-miR-382 56459 Sae1 gcuuagguggugCUUGUUGAAg |:||||||| auggaggucagaGGACAACUUg 2 11 414 435 [mm9:7:16905768-16905789:-] 0.5000 146 7 -15.78 -0.2339 MIMAT0001542 mmu-miR-449a 56459 Sae1 uggUCGAUUGUUAU-GU-GACGGu ||| :|:: || || ||||| uggAGCGGAUGUUAUCAGCUGCCc 2 20 69 92 [mm9:7:16906144-16906167:-] 0.5000 122 0 -12.78 -0.1757 MIMAT0001542 mmu-miR-449a 56459 Sae1 uggUCGAUUGUUAU-GU-GACGGu ||| :|:: || || ||||| uggAGCGGAUGUUAUCAGCUGCCc 2 20 36 59 [mm9:7:16906144-16906167:-] 0.5000 122 0 -12.78 -0.1942 MIMAT0003169 mmu-miR-539 56459 Sae1 ugUGUGGUUCCUAUUAAAGAGg ::||||| || |||||| auGUACCAA-GAACCUUUCUCa 2 21 564 584 [mm9:7:16912602-16912622:-] 0.5003 130 6 -16.82 -0.1146 MIMAT0003169 mmu-miR-539 56459 Sae1 uguguGGUU--CCUAUUAAAGAgg |||| | | |||||| ucagcCCAAACAGUUUAUUUCUaa 3 18 435 458 [mm9:7:16912728-16912751:-] 0.4999 128 0 -8.17 -0.1370 MIMAT0003172 mmu-miR-542-3p 56459 Sae1 aaagucaauagUUAGACAGUGu |: ||||||| uuggaagggagAGACUGUCACc 2 12 351 372 [mm9:7:16912814-16912835:-] 0.4968 143 7 -11.88 -0.1028 MIMAT0003183 mmu-miR-376c 56459 Sae1 ugcACUUUAAAGGAGAUA-CAa | || || ||||||| || gacUUAACUUCCCUCUAUAGUc 2 19 242 263 [mm9:7:16912923-16912944:-] 0.5005 130 0 -10.20 -0.1568 MIMAT0003188 mmu-miR-503 56459 Sae1 gacgucaugacaaggGCGACGAu ||||||| agucaccaacaacaaCGCUGCUu 2 9 166 188 [mm9:7:16906048-16906070:-] 0.5000 140 7 -13.57 -0.7158 MIMAT0003188 mmu-miR-503 56459 Sae1 gacgucaugacaaggGCGACGAu ||||||| agucaccaacaacaaCGCUGCUu 2 9 133 155 [mm9:7:16906048-16906070:-] 0.5000 140 7 -13.57 -0.7240 MIMAT0003475 mmu-miR-146b 56459 Sae1 ucGGAUACCUUAAGUCAAGAGu |:|:| ||: :||||||| aaCUUGUAGAGAAUAGUUCUCu 2 21 463 484 [mm9:7:16905752-16905773:-] 0.5000 160 7 -18.38 -0.5878 MIMAT0003475 mmu-miR-146b 56459 Sae1 ucGGAUACCUUAAGUCAAGAGu |:|:| ||: :||||||| aaCUUGUAGAGAAUAGUUCUCu 2 21 430 451 [mm9:7:16905752-16905773:-] 0.5000 160 7 -18.38 -0.5951 MIMAT0003513 mmu-miR-505 56459 Sae1 ucuUUUGGUCGUUCACAACUGc |:||| | : ||||||| aauAGACC-UCUGUUGUUGACc 2 20 306 326 [mm9:7:16912860-16912880:-] 0.5005 149 7 -12.64 -0.1282 MIMAT0004847 mmu-miR-882 56459 Sae1 ugauuacgcgAUUGAGAGAGGa ||::||||||| uuguagagaaUAGUUCUCUCCu 2 13 466 487 [mm9:7:16905749-16905770:-] 0.5000 152 7 -19.19 -0.7816 MIMAT0004847 mmu-miR-882 56459 Sae1 ugAUUACG-CGAUUG--AGAGAGGa |:| || ||::| ||||||| ugUGAAGCACCUGGCCGUCUCUCCa 2 21 142 166 [mm9:7:16906070-16906094:-] 0.5000 150 7 -16.29 -0.2111 MIMAT0004847 mmu-miR-882 56459 Sae1 ugauuacgcgAUUGAGAGAGGa ||::||||||| uuguagagaaUAGUUCUCUCCu 2 13 433 454 [mm9:7:16905749-16905770:-] 0.5000 152 7 -19.19 -0.7889 MIMAT0004847 mmu-miR-882 56459 Sae1 ugAUUACG-CGAUUG--AGAGAGGa |:| || ||::| ||||||| ugUGAAGCACCUGGCCGUCUCUCCa 2 21 109 133 [mm9:7:16906070-16906094:-] 0.5000 150 7 -16.29 -0.2154 MIMAT0004858 mmu-miR-18b 56459 Sae1 gauugUCGUGAUCUACGUGGAAu ||| || ||||||||| uugugAGC-CU--AUGCACCUUa 2 19 392 411 [mm9:7:16912775-16912794:-] 0.4983 153 7 -19.27 -0.8612 MIMAT0004859 mmu-miR-193b 56459 Sae1 ucgcccUGAAACACCCGG-UCAa | ||| ||||| ||| acuguaAAUUUCAGGGCCAAGUu 2 17 531 553 [mm9:7:16912633-16912655:-] 0.5003 120 0 -14.13 -0.2165 MIMAT0004896 mmu-miR-590-3p 56459 Sae1 ugaucgaauauguaUUUUAAu |||||| auacaauacuuaugAAAAUUa 2 8 352 372 [mm9:7:16905864-16905884:-] 0.5000 120 6 -7.90 -0.2515 MIMAT0004896 mmu-miR-590-3p 56459 Sae1 ugaucgaauauguaUUUUAAu |||||| auacaauacuuaugAAAAUUa 2 8 319 339 [mm9:7:16905864-16905884:-] 0.5000 120 6 -7.90 -0.2560

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G013727 Sae1 Mus musculus 56459

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Sae1 mmu-miR-501-5p beg:744 end:763 pic:3' AAAGTGGGTCCCTGTTTCCTAA 5'& | |. |||.||||||| &5' --TTGCT---GGATAAAGGAT- 3' Sae1 mmu-miR-18astar beg:702 end:721 pic:3' GTCTTCCTCGTGAATCCCGTCA 5'& |||||.|. ||||||| &5' ----AGGAGTATG-AGGGCAG- 3' Sae1 mmu-miR-328 beg:540 end:550 pic:3' TGCCTTCCCGTCTCTCCCGGTC 5'& ||||||| &5' --------------AGGGCCA- 3' Sae1 mmu-miR-153 beg:389 end:407 pic:3' CTAGTGAAAACACT--GATACGTT 5'& |||||| ||||||| &5' --------TTGTGAGCCTATGCA- 3' Sae1 mmu-miR-194 beg:614 end:632 pic:3' AGGTGTACCTCAACGACAATGT 5'& .|||.| ||||||| &5' -----GTGGGGCA-CTGTTAC- 3' Sae1 mmu-miR-218-2star beg:416 end:431 pic:3' GCGCCACGAACTGTCTTGGTAC 5'& ||. ||||||| &5' ---------TGGTTGAACCAT- 3' Sae1 mmu-miR-540-5p beg:311 end:330 pic:3' TGTCTCAGTCTCCCACTGGGAAC 5'& || | | |||||||| &5' ------TCTGTTGTTGACCCTT- 3' Sae1 mmu-miR-1902 beg:130 end:148 pic:3' TTCAGTACGGATGACGTGGAGA 5'& ||| |. |||||||| &5' ---TCACGTG----GCACCTCT 3' Sae1 mmu-miR-18b beg:394 end:412 pic:3' GATTGTCGTGATCTACGTGGAAT 5'& ||| ||| ||||||||| &5' -----AGC-CTA--TGCACCTTA 3' Sae1 mmu-miR-18a beg:395 end:412 pic:3' GATAGACGTGATCTACGTGGAAT 5'& || ||| ||||||||| &5' ------GC-CTA--TGCACCTTA 3' Sae1 mmu-miR-1966 beg:142 end:162 pic:3' CTGAGAGAGGACTCGGT-CGAGGGAA 5'& |||. .|| |||||||| &5' ------CTCT--GGCATTGCTCCCTT 3' Sae1 mmu-miR-127 beg:261 end:280 pic:3' TCGGTTCGAGTCTGCCTAGGCT 5'& ||| ||. |||||||| &5' -----AGCAGAGG-GGATCCGA 3' Sae1 mmu-miR-3072star beg:107 end:122 pic:3' GGACGGGAGGGAGCCCCAGGGA 5'& |. ||||||||| &5' ---------CTGCGGGGTCCC- 3' Sae1 mmu-miR-329 beg:0 end:13 pic:3' TTTTTCCAATCGAC-CCACACAA 5'& |||| ||||||| &5' ----------GCTGAGGTGTGT- 3' Sae1 mmu-miR-362-3p beg:2 end:13 pic:3' ACTTAGGAACTTGTCCACACAA 5'& |||||||| &5' -------------AGGTGTGT- 3' Sae1 mmu-miR-547 beg:557 end:574 pic:3' GAGTGAGTTTCTACATGGTTC 5'& || |||||||||| &5' ------CATA-ATGTACCAAG 3' Sae1 mmu-miR-7a beg:688 end:701 pic:3' TGTTGTTTTAGTGATCAGAAGGT 5'& .|.||||||| &5' ------------TTGGTCTTCC- 3' Sae1 mcmv-miR-m01-3 beg:61 end:81 pic:3' AGC-TCCGTTGTCAGCGAAGTGGC 5'& | |||| ||| |||||.| &5' --GCAGGC--CAGA--CTTCATC- 3' Sae1 mcmv-miR-m108-2-3p beg:594 end:615 pic:3' TGGCCAGTGAGCAGAGCTCAGTG 5'& || ||. || ||||.| &5' ---GGGCATAT-TCCAGAGTTA- 3' Sae1 mcmv-miR-M23-1-3p beg:509 end:528 pic:3' CCGGAGCC--CGGCTGCGTCCTC 5'& || ||||. |||||| &5' ------GGATGCCGGGGCAGGA- 3' Sae1 mcmv-miR-M44-1 beg:742 end:764 pic:3' TGGCGCCGA-GACCT-TTTTCTAT 5'& ||.| ||||| |||.|||. &5' -----GGTTGCTGGATAAAGGATG 3' Sae1 mcmv-miR-m59-1 beg:612 end:631 pic:3' GACTGCCAGCTCCGTGACGATT 5'& || .|.|||||||.|| &5' -----GGGTGGGGCACTGTTA- 3' Sae1 mmu-let-7bstar beg:0 end:14 pic:3' CCCTTCCGTCATCCAACATATC 5'& || ||| |||.|| &5' ------GCTG-AGG-TGTGTA- 3' Sae1 mmu-miR-101a beg:515 end:537 pic:3' AAGTCAATAGTGTC----ATGACAT 5'& |.| .||| ||||||| &5' --CGGG----GCAGGATTTACTGTA 3' Sae1 mmu-miR-101b beg:519 end:537 pic:3' AAGTCGATAGTGTC----ATGACAT 5'& .||| ||||||| &5' ----------GCAGGATTTACTGTA 3' Sae1 mmu-miR-1186b beg:484 end:505 pic:3' CACCACGTACGGAAATTAGGGT 5'& |||| ||.| ||||||.| &5' ----TGCAGGCTTGTAATCCTA 3' Sae1 mmu-miR-1197 beg:212 end:231 pic:3' TCTTCA-TCTGGTACACAGGAT 5'& || || ||| |||||.|. &5' -GATGTCAGA----GTGTCTTG 3' Sae1 mmu-miR-122 beg:594 end:609 pic:3' GTTTGTGGTAACA-GTGTGAGGT 5'& | ||.|.|||| &5' -----------GGGCATATTCCA 3' Sae1 mmu-miR-125a-3p beg:14 end:34 pic:3' CCGAGGGTTCTTGGAGTGGACA 5'& ||| ||.|| ||||||| &5' GGCCACCGAG----TCACCTG- 3' Sae1 mmu-miR-125a-5p beg:92 end:109 pic:3' AGTGTCCAATTTCCCAGAGTCCCT 5'& .||| ||||||| &5' ---------GAAGCTA-TCAGGGA 3' Sae1 mmu-miR-130bstar beg:180 end:200 pic:3' TCATCACGTTGTCCCTTTCTCA 5'& ||||| .|| ||.|||| &5' ---AGTGCC-TAGTGAGAGAG- 3' Sae1 mmu-miR-132 beg:612 end:631 pic:3' GCTGGTACCGACATC-TGACAAT 5'& || || | ||||||| &5' -------GGGTGGGGCACTGTTA 3' Sae1 mmu-miR-138star beg:340 end:362 pic:3' GGGA-CCACAACACTTCA-TCGGC 5'& ||| ||||||| |||| || &5' -CCTGGGTGTTG-GAAGGGAG--- 3' Sae1 mmu-miR-144 beg:516 end:537 pic:3' TCATGTAGTAGATATGACAT 5'& .| || ||. ||||||| &5' GGGGCAGGATT--TACTGTA 3' Sae1 mmu-miR-149 beg:55 end:74 pic:3' CCCTCACTTCTGTGCCTCGGTCT 5'& ||| ||| || .|||||| &5' --GAGC-AAG-CA---GGCCAGA 3' Sae1 mmu-miR-150star beg:552 end:572 pic:3' GATAGGGGGTCCGGACATGGTC 5'& .||. || ||||||| &5' --GTCTA-CATAA-TGTACCA- 3' Sae1 mmu-miR-151-3p beg:327 end:355 pic:3' GGAGTT---CCTCGGAGTCA-GATC 5'& |||||. ||||||| .|| .|.| &5' CCTCAGGCTGGAGCCTGGGTGTTGG 3' Sae1 mmu-miR-15bstar beg:53 end:78 pic:3' ATCTCG-TCGTTTATTACT-AAGC 5'& |||||| ||||.. || ||| &5' TAGAGCAAGCAGGCCA-GACTTC- 3' Sae1 mmu-miR-18astar beg:664 end:687 pic:3' GTCTTC-CTCGTGAATCCCGTCA 5'& |||.|| |.|. .||||||| &5' CAGGAGTGGGTTGG-GGGGCAGT 3' Sae1 mmu-miR-18astar beg:508 end:526 pic:3' GTCTTCCT-CGTGAATCCCGTCA 5'& .||| || | .|||||| &5' ----GGGATGC-C--GGGGCAG- 3' Sae1 mmu-miR-1902 beg:391 end:411 pic:3' TTCAGTACGGATGACGTGGAGA 5'& || | ||||| |||||||. &5' --GTGA-GCCTA-TGCACCTT- 3' Sae1 mmu-miR-1904 beg:246 end:271 pic:3' GGAGGGAGGTCTCC-TCGTCTTG 5'& |.||||||.| || ||||||. &5' CTTCCCTCTATAGTCAGCAGAG- 3' Sae1 mmu-miR-1907 beg:305 end:323 pic:3' TGGAGGTCTAGGAGACGACGAG 5'& .||| ||||||.||.| &5' -----TAGA-CCTCTGTTGTT- 3' Sae1 mmu-miR-1929 beg:489 end:507 pic:3' GAGACGAGATATTTCAGGATCTT 5'& ||| |.||| ||||||| &5' ----GCT-TGTAA--TCCTAGA- 3' Sae1 mmu-miR-1935 beg:68 end:93 pic:3' TCTCTAGGCGGTCGGAGACGGA 5'& ||| || || ||||.||.|| &5' AGACTTCATCCTGCCTTTGTCT 3' Sae1 mmu-miR-1948 beg:274 end:298 pic:3' GACATGCTCACGA-----GACGGATTT 5'& |||| || ||||||..| &5' -----CGAG-GCCCAGTGCTGCCTGGA 3' Sae1 mmu-miR-1948 beg:706 end:730 pic:3' GACATGCTCA---CGAGACGGATTT 5'& |||.||| || |||.|||. &5' --GTATGAGGGCAGC-CTGTCTAG- 3' Sae1 mmu-miR-1953 beg:566 end:585 pic:3' GTCTTCGGACTCTT-GAAAGGGT 5'& || |||| |||||.|| &5' ------CCA-AGAACCTTTCTCA 3' Sae1 mmu-miR-1971 beg:72 end:90 pic:3' AGAGTCGGGTCGGAAATG 5'& .||| .|| ||||||. &5' -TTCA-TCCTGCCTTTG- 3' Sae1 mmu-miR-1982.1 beg:606 end:623 pic:3' GACACCCTCTTGTATCCCACTCT 5'& ||| |||||||.|. &5' ------GAGT---TAGGGTGGGG 3' Sae1 mmu-miR-199bstar beg:630 end:650 pic:3' CTTGTCCATCAGATTTGTGACCC 5'& ||| || |.|||||| &5' ---CAGC---TCCTTATACTGGG 3' Sae1 mmu-miR-204 beg:343 end:361 pic:3' TCCGTATCCTACTG-TTTCCCTT 5'& ||.|| .||||||. &5' -------GGGTGTTGGAAGGGAG 3' Sae1 mmu-miR-211 beg:339 end:362 pic:3' TCCGTTTCCTACTG-TTTCCCTT 5'& || ||.|| .||||||. &5' --GCCT-GGGTGTTGGAAGGGAG 3' Sae1 mmu-miR-212 beg:612 end:631 pic:3' ACCGGCACTGACCTC-TGACAAT 5'& |. |||.| ||||||| &5' -------GGGTGGGGCACTGTTA 3' Sae1 mmu-miR-2135 beg:64 end:78 pic:3' CAAAGCCGGGGTTCTGGAGA 5'& |||| ||||.|| &5' -----GGCC---AGACTTC- 3' Sae1 mmu-miR-21star beg:304 end:324 pic:3' CTGTC-GGGTAGCTGACGACAAC 5'& |.|| ||. |||.||||| &5' -ATAGACCT-----CTGTTGTTG 3' Sae1 mmu-miR-22star beg:284 end:303 pic:3' ATTTCGAACGGTG-ACTTCTTGA 5'& ||| | ||.|||||| &5' -------TGCTGCCTGGAGAACT 3' Sae1 mmu-miR-28 beg:621 end:642 pic:3' GAGTTATCTGACAC----TCGAGGAA 5'& ||||| |||||||| &5' --------ACTGTTACCCAGCTCCTT 3' Sae1 mmu-miR-28star beg:713 end:731 pic:3' AGGTCGTCGAGTGTTAGATCAC 5'& .||||| | .|||||| &5' ---GGCAGC-CT--GTCTAGT- 3' Sae1 mmu-miR-296-5p beg:661 end:684 pic:3' TGTCCTAACTC--CCCCCCGGGA 5'& |||||| ||.| ||||||| &5' ACAGGAGTGGGTTGGGGGGC--- 3' Sae1 mmu-miR-3072 beg:666 end:685 pic:3' TCTTCCGAAGGACCTCCCCCGT 5'& || .||.| .||||||| &5' AGTGGGTT------GGGGGGCA 3' Sae1 mmu-miR-3099star beg:343 end:362 pic:3' GTTCC-CGACCTTCCTTCGACC 5'& .|| |.|||||||.|| &5' --GGGTGTTGGAAGGGAG---- 3' Sae1 mmu-miR-324-3p beg:332 end:355 pic:3' TCG-TCGTGGACCC-CGTCACC 5'& .|| .| .|||||| |. ||| &5' GGCTGGAGCCTGGGTGT--TGG 3' Sae1 mmu-miR-324-5p beg:497 end:518 pic:3' TGTGGTTACGGGATC-----CCCTACGC 5'& .||||| ||||||| &5' ---------TCCTAGATGTTGGGATGC- 3' Sae1 mmu-miR-331-3p beg:471 end:482 pic:3' AAGATCCTATCCGGGTCCCCG 5'& |.|||||| &5' -------------CTAGGGGC 3' Sae1 mmu-miR-331-5p beg:160 end:192 pic:3' CC--TAG-GGACCCTGG----TATGGATC 5'& || .|| |. |||||. .|.||||| &5' GGCTGTCACTGGGGACTGGCAGTGCCTAG 3' Sae1 mmu-miR-338-3p beg:495 end:514 pic:3' GTTGTTTTAGTGA-CTACGACCT 5'& |||| || ||||.|||. &5' ------AATC-CTAGATGTTGGG 3' Sae1 mmu-miR-338-3p beg:733 end:755 pic:3' GTTGTTTTAGT--GACT-ACGACCT 5'& |.||| .||. ||||||| &5' -----AGATCCCCTTGGTTGCTGGA 3' Sae1 mmu-miR-338-3p beg:344 end:356 pic:3' GTTGTTTTAGTGACTACGACCT 5'& |.||.|||| &5' -------------GGTGTTGGA 3' Sae1 mmu-miR-33 beg:552 end:570 pic:3' ACGTTACGT-TGATGTTACGTG 5'& |. || |.||||.|| &5' ------GTCTAC-ATAATGTAC 3' Sae1 mmu-miR-343 beg:341 end:363 pic:3' AGACCCGTGTACTTCCCTCT 5'& ||||| . ||||||||| &5' -CTGGGTGTTGGAAGGGAGA 3' Sae1 mmu-miR-3470a beg:715 end:738 pic:3' GGTCGGACCAGATGTTTCA-CT 5'& |||||| ||||| || || &5' -CAGCCT-GTCTAGTTTGTAGA 3' Sae1 mmu-miR-3473 beg:21 end:44 pic:3' CCGACTCGGT-------AGAGAGGT 5'& |||.|| ||||||| &5' ----GAGTCACCTGCCCTCTCTCC- 3' Sae1 mmu-miR-3473 beg:417 end:438 pic:3' CCGACTCGGTAGAGAGGT 5'& ||.||| ||||||.|.|| &5' GGTTGAACCATCTTTTCA 3' Sae1 mmu-miR-3474 beg:691 end:708 pic:3' CTTAGGTGCAG-AGGAGGGTCCC 5'& ||| ||||.|.||| &5' --------GTCTTCCTTCTAGG- 3' Sae1 mmu-miR-3475 beg:593 end:611 pic:3' AAGTTTGGTACACGGAGGTCT 5'& |.. ||| .|||||| &5' ---AGGGCATA---TTCCAGA 3' Sae1 mmu-miR-34a beg:348 end:371 pic:3' TGTTGGTCGA--TTCTGTGACGGT 5'& . | .||| ||||.|| &5' ----TTGGAAGGGAGAGACTGTCA 3' Sae1 mmu-miR-351 beg:89 end:109 pic:3' GTCCGAGTTTCCCGAGGAGTCCCT 5'& .||.|| ||| ||||||| &5' ----TTCGAA--GCTA-TCAGGGA 3' Sae1 mmu-miR-361 beg:283 end:305 pic:3' CATGG-GGACCTCTAAGACTATT 5'& ||.|. |||||||| |||| &5' GTGCTGCCTGGAGAA-CTGA--- 3' Sae1 mmu-miR-380-3p beg:543 end:564 pic:3' TTCTACACCTGGTAT-----GATGTAT 5'& ||.||| ||||||| &5' -------GGGCCAAGTTGGTCTACATA 3' Sae1 mmu-miR-421 beg:369 end:393 pic:3' CGCGGGTTAAT--TACAGACAACTA 5'& ||||.||. |||||| |||.| &5' ---CCCAGTTGTCATGTCTTTTGGT 3' Sae1 mmu-miR-431 beg:505 end:529 pic:3' ACGTA-CTGCCGGA--CGTTCTGT 5'& ||. ||. ||| |||.||. &5' TGTTGGGAT-GCCGGGGCAGGAT- 3' Sae1 mmu-miR-450b-3p beg:108 end:124 pic:3' TACGTACGTTTTACAAGGGTTA 5'& |||... |||||| &5' -----TGCGGGG---TCCCAA- 3' Sae1 mmu-miR-450b-3p beg:561 end:586 pic:3' TACGTACGTTTTAC--AAGGGTTA 5'& |||.| |||.| |||.||| &5' ATGTAC-CAAGAACCTTTCTCAA- 3' Sae1 mmu-miR-450b-5p beg:520 end:539 pic:3' ATAAGTCCTTGTATGACGTTTT 5'& ||||| |||||.||| &5' ----CAGGATT-TACTGTAAA- 3' Sae1 mmu-miR-453 beg:705 end:724 pic:3' ACGTTCGAGTGATACT-CCGTTGGA 5'& | ||||| ||||.||| &5' ---------AGTATGAGGGCAGCCT 3' Sae1 mmu-miR-455star beg:592 end:605 pic:3' GCTACATCAGGTTTCCGTGTAT 5'& ||.||||.|| &5' -----------AAGGGCATAT- 3' Sae1 mmu-miR-493 beg:396 end:418 pic:3' GGAC-CGTGTGTCATCCTGGAAGT 5'& ||| |||| | |||||.| &5' CCTATGCAC-CTT----ACCTTTA 3' Sae1 mmu-miR-505 beg:306 end:326 pic:3' TCTTTTGGT--CGTTCACAACTGC 5'& |.||| |. ||||||| &5' ---AGACCTCTGT---TGTTGAC- 3' Sae1 mmu-miR-667 beg:669 end:689 pic:3' GAACCCGACCCACCGTCCACAGT 5'& ||||.|||| ||||| || &5' --TGGGTTGGGGGGCAGTTG--- 3' Sae1 mmu-miR-670 beg:90 end:109 pic:3' AAGTGGTGTATGTGAGTCCCTA 5'& ||. .| ||||||| &5' -TCGAAGCTA----TCAGGGA- 3' Sae1 mmu-miR-671-3p beg:332 end:356 pic:3' CC-ACCTCGGGACTCTTGGCCT 5'& || ||||| ||||.| ..||| &5' GGCTGGAG-CCTGGGTGTTGGA 3' Sae1 mmu-miR-673-3p beg:23 end:47 pic:3' CCACGTGT-CTTGAGTCGGGGCCT 5'& || ||| | ||| |.||||| &5' -GT-CACCTGCCCTCT-CTCCGGA 3' Sae1 mmu-miR-682 beg:520 end:545 pic:3' GTCTGAAGTGACAC-TGACGTC 5'& ||| ||.||||| |.| ||| &5' CAGGATTTACTGTAAATTTCAG 3' Sae1 mmu-miR-690 beg:385 end:406 pic:3' AAACCAACACTCGGAT-CGGAAA 5'& |||||||||||||||| || &5' TTTGGTTGTGAGCCTATGC---- 3' Sae1 mmu-miR-692 beg:180 end:201 pic:3' CTCACTCCGCGAGTTTCTCTA 5'& |||| |. |.||||| &5' -AGTGCCTAGTG-AGAGAGA- 3' Sae1 mmu-miR-707 beg:53 end:76 pic:3' GCATC-CGTTCG-CCGTACTGAC 5'& ||| |||||| ||| |||| &5' --TAGAGCAAGCAGGCCAGACT- 3' Sae1 mmu-miR-708star beg:713 end:732 pic:3' GATCTTCGAGTGT-CAGATCAAC 5'& ..|| .| |||||||| &5' ----GGGCA-GCCTGTCTAGTT- 3' Sae1 mmu-miR-709 beg:73 end:95 pic:3' AGGAGGACGGAGACGGAGG 5'& || ||||||||.||.||.| &5' TCATCCTGCCTTTGTCTTC 3' Sae1 mmu-miR-713 beg:175 end:194 pic:3' CGACA--CACGGAAGTCACGT 5'& ||| |||||| |||| &5' -CTGGCAGTGCCT--AGTG-- 3' Sae1 mmu-miR-743a beg:367 end:390 pic:3' AGATGAGTCGAACC-ACAGAAAG 5'& || |||.| |||||||. &5' ---ACCCAGTTGTCATGTCTTTT 3' Sae1 mmu-miR-743a beg:769 end:781 pic:3' AGATGAGTCGAACCACAGAAAG 5'& ||||||||| &5' -------------GTGTCTTTC 3' Sae1 mmu-miR-743b-3p beg:370 end:390 pic:3' AGATAAGTCGTAC-TACAGAAAG 5'& |||. ||||||||. &5' ------CAGTTGTCATGTCTTTT 3' Sae1 mmu-miR-743b-3p beg:769 end:781 pic:3' AGATAAGTCGTACTACAGAAAG 5'& .|||||||| &5' -------------GTGTCTTTC 3' Sae1 mmu-miR-764-5p beg:702 end:723 pic:3' TCCTCCTGTACACTCGT-GG 5'& ||||| .||| |.||| || &5' AGGAG--TATGAGGGCAGCC 3' Sae1 mmu-miR-767 beg:328 end:352 pic:3' ACGAGTCTG---TTGGTACCACGT 5'& |||||.| |.|| ||||. &5' --CTCAGGCTGGAGCCTGGGTGT- 3' Sae1 mmu-miR-770-3p beg:539 end:561 pic:3' GGTCGAGGTGCAGTCCGGGTGC 5'& ||| ||| ||. ||.|.|| &5' -CAGGGCCAAGTT-GGTCTAC- 3' Sae1 mmu-miR-7b beg:761 end:781 pic:3' TGTTGTTTTAGTGTTCAGAAGGT 5'& |.||.|||.| |||||.| &5' ATAATAAAGT-----GTCTTTC- 3' Sae1 mmu-miR-874 beg:504 end:526 pic:3' AGCCAGGGAGCC---CGGTCCCGTC 5'& . |.|| |||.|||||| &5' ------TGTTGGGATGCCGGGGCAG 3' Sae1 mmu-miR-878-3p beg:367 end:385 pic:3' AGATGGGTCACACCACAGTACG 5'& ||||||| |||||||. &5' ---ACCCAGT----TGTCATGT 3' Sae1 mmu-miR-882 beg:30 end:44 pic:3' TGATTACGCGATTGAGAGAGGA 5'& || |||||||| &5' --------GCC--CTCTCTCC- 3' Sae1 mmu-miR-93star beg:256 end:269 pic:3' GCCCTTCACGATCGAGTCGTCA 5'& ||| ||||||| &5' ----------TAG-TCAGCAG- 3' Sae1 mmu-miR-1982.2 beg:606 end:620 pic:3' GACACCCTCTTGTATCCCACT 5'& ||| |||||||. &5' ------GAGT---TAGGGTGG 3' Sae1 mmu-miR-1894-3p beg:147 end:163 pic:3' GAGGGAAGTGGGAGAGGGAACG 5'& ||.. |||||||| &5' -------CATTG-CTCCCTTG- 3' Sae1 mmu-miR-185 beg:28 end:44 pic:3' AGTCCTTGACGGAAAGAGAGGT 5'& ||||| ||||||| &5' -------CTGCCC-TCTCTCC- 3'

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Sae1 RAID00034772 mmu-miR-185-5p miRNA MIMAT0000214 Sae1 mRNA 56459 Prediction 0.1828 Sae1 RAID00077007 mmu-miR-34a-5p miRNA MIMAT0000542 Sae1 mRNA 56459 Prediction 0.1828 Sae1 RAID00145484 mmu-miR-376c-3p miRNA MIMAT0003183 Sae1 mRNA 56459 Prediction 0.1828 Sae1 RAID00172715 mmu-miR-101a-3p miRNA MIMAT0000133 Sae1 mRNA 56459 Prediction 0.1828 Sae1 RAID00263000 mmu-miR-301b-5p miRNA MIMAT0017232 Sae1 mRNA 56459 Prediction 0.1828 Sae1 RAID00293873 mmu-miR-449a-5p miRNA MIMAT0001542 Sae1 mRNA 56459 Prediction 0.1828 Sae1 RAID00310830 mmu-miR-362-3p miRNA MIMAT0004684 Sae1 mRNA 56459 Prediction 0.1828 Sae1 RAID00364000 mmu-miR-292a-5p miRNA MIMAT0000369 Sae1 mRNA 56459 Prediction 0.1828 Sae1 RAID00373424 mmu-miR-290a-5p miRNA MIMAT0000366 Sae1 mRNA 56459 Prediction 0.1828 Sae1 RAID00544414 mmu-miR-7079-5p miRNA MIMAT0028064 Sae1 mRNA 56459 Prediction 0.1828 Sae1 RAID00770348 mmu-miR-211-5p miRNA MIMAT0000668 Sae1 mRNA 56459 Prediction 0.1828 Sae1 RAID00865257 mmu-miR-6955-3p miRNA MIMAT0027811 Sae1 mRNA 56459 Prediction 0.1828 Sae1 RAID00937494 mmu-miR-26b-5p miRNA MIMAT0000534 Sae1 mRNA 56459 Prediction 0.1828 Sae1 RAID00957869 mmu-miR-146a-5p miRNA MIMAT0000158 Sae1 mRNA 56459 Prediction 0.1828 Sae1 RAID01073723 mmu-miR-149-5p miRNA MIMAT0000159 Sae1 mRNA 56459 Prediction 0.1828 Sae1 RAID01194268 mmu-miR-18b-5p miRNA MIMAT0004858 Sae1 mRNA 56459 Prediction 0.2202 Sae1 RAID01259031 mmu-miR-7116-5p miRNA MIMAT0028129 Sae1 mRNA 56459 Prediction 0.1828 Sae1 RAID01292303 mmu-miR-542-3p miRNA MIMAT0003172 Sae1 mRNA 56459 Prediction 0.1828 Sae1 RAID01296140 mmu-miR-743b-3p miRNA MIMAT0004840 Sae1 mRNA 56459 Prediction 0.1828 Sae1 RAID01371232 mmu-miR-153-3p miRNA MIMAT0000163 Sae1 mRNA 56459 Prediction 0.1828 Sae1 RAID01505866 mmu-miR-6911-5p miRNA MIMAT0027722 Sae1 mRNA 56459 Prediction 0.1828 Sae1 RAID01590744 mmu-miR-7028-5p miRNA MIMAT0027960 Sae1 mRNA 56459 Prediction 0.1828 Sae1 RAID01888053 mmu-miR-29b-3p miRNA MIMAT0000127 Sae1 mRNA 56459 Prediction 0.1828 Sae1 RAID01890099 mmu-miR-29c-3p miRNA MIMAT0000536 Sae1 mRNA 56459 Prediction 0.1828 Sae1 RAID01903832 mmu-miR-204-5p miRNA MIMAT0000237 Sae1 mRNA 56459 Prediction 0.1828 Sae1 RAID01926462 mmu-miR-183-5p miRNA MIMAT0000212 Sae1 mRNA 56459 Prediction 0.1828 Sae1 RAID01972219 mmu-miR-6982-3p miRNA MIMAT0027867 Sae1 mRNA 56459 Prediction 0.1828 Sae1 RAID01994401 mmu-miR-7a-5p miRNA MIMAT0000677 Sae1 mRNA 56459 Prediction 0.1828 Sae1 RAID02085396 mmu-miR-539-5p miRNA MIMAT0003169 Sae1 mRNA 56459 Prediction 0.1828 Sae1 RAID02140001 mmu-miR-18a-5p miRNA MIMAT0000528 Sae1 mRNA 56459 Prediction 0.2202 Sae1 RAID02248920 mmu-miR-676-5p miRNA MIMAT0003781 Sae1 mRNA 56459 Prediction 0.1828 Sae1 RAID02292417 mmu-miR-101b-3p miRNA MIMAT0000616 Sae1 mRNA 56459 Prediction 0.1828 Sae1 RAID02308895 mmu-miR-145a-5p miRNA MIMAT0000157 Sae1 mRNA 56459 Prediction 0.1828 Sae1 RAID02350453 mmu-miR-590-3p miRNA MIMAT0004896 Sae1 mRNA 56459 Prediction 0.1828 Sae1 RAID02380155 mmu-miR-29a-3p miRNA MIMAT0000535 Sae1 mRNA 56459 Prediction 0.1828 Sae1 RAID02385871 mmu-miR-6952-3p miRNA MIMAT0027805 Sae1 mRNA 56459 Prediction 0.1828 Sae1 RAID02448164 mmu-miR-743a-3p miRNA MIMAT0004238 Sae1 mRNA 56459 Prediction 0.1828 Sae1 RAID02555032 mmu-miR-125a-3p miRNA MIMAT0004528 Sae1 mRNA 56459 Prediction 0.1828 Sae1 RAID02633234 mmu-miR-335-3p miRNA MIMAT0004704 Sae1 mRNA 56459 Prediction 0.1828 Sae1 RAID02679099 mmu-miR-200a-3p miRNA MIMAT0000519 Sae1 mRNA 56459 Prediction 0.1828 Sae1 RAID02709706 mmu-miR-193a-3p miRNA MIMAT0000223 Sae1 mRNA 56459 Prediction 0.1828 Sae1 RAID02736011 mmu-miR-7684-3p miRNA MIMAT0029891 Sae1 mRNA 56459 Prediction 0.1828 Sae1 RAID02769260 mmu-miR-6980-5p miRNA MIMAT0027862 Sae1 mRNA 56459 Prediction 0.1828 Sae1 RAID02791093 mmu-miR-141-3p miRNA MIMAT0000153 Sae1 mRNA 56459 Prediction 0.1828 Sae1 RAID02863380 mmu-miR-882 miRNA MIMAT0004847 Sae1 mRNA 56459 Prediction 0.1828 Sae1 RAID02900455 mmu-miR-7073-5p miRNA MIMAT0028052 Sae1 mRNA 56459 Prediction 0.1828 Sae1 RAID02906163 mmu-miR-365-3p miRNA MIMAT0000711 Sae1 mRNA 56459 Prediction 0.1828 Sae1 RAID03025122 mmu-miR-146b-5p miRNA MIMAT0003475 Sae1 mRNA 56459 Prediction 0.1828 Sae1 RAID03086685 mmu-miR-7033-5p miRNA MIMAT0027970 Sae1 mRNA 56459 Prediction 0.1828 Sae1 RAID03100209 mmu-miR-7b-5p miRNA MIMAT0000678 Sae1 mRNA 56459 Prediction 0.1828 Sae1 RAID03148383 mmu-miR-758-3p miRNA MIMAT0003889 Sae1 mRNA 56459 Prediction 0.1828 Sae1 RAID03196084 mmu-miR-27b-3p miRNA MIMAT0000126 Sae1 mRNA 56459 Prediction 0.1828 Sae1 RAID03201720 mmu-miR-134-5p miRNA MIMAT0000146 Sae1 mRNA 56459 Prediction 0.1828 Sae1 RAID03269457 mmu-miR-324-5p miRNA MIMAT0000555 Sae1 mRNA 56459 Prediction 0.1828 Sae1 RAID03318549 mmu-miR-301a-5p miRNA MIMAT0017008 Sae1 mRNA 56459 Prediction 0.1828 Sae1 RAID03402333 mmu-miR-194-5p miRNA MIMAT0000224 Sae1 mRNA 56459 Prediction 0.1828 Sae1 RAID03432510 mmu-miR-382-5p miRNA MIMAT0000747 Sae1 mRNA 56459 Prediction 0.1828 Sae1 RAID03470399 mmu-miR-505-3p miRNA MIMAT0003513 Sae1 mRNA 56459 Prediction 0.1828 Sae1 RAID03471123 mmu-miR-193b-3p miRNA MIMAT0004859 Sae1 mRNA 56459 Prediction 0.1828 Sae1 RAID03559264 mmu-miR-27a-3p miRNA MIMAT0000537 Sae1 mRNA 56459 Prediction 0.1828 Sae1 RAID03566508 mmu-miR-137-3p miRNA MIMAT0000149 Sae1 mRNA 56459 Prediction 0.1828 Sae1 RAID03624456 mmu-miR-329-3p miRNA MIMAT0000567 Sae1 mRNA 56459 Prediction 0.1828 Sae1 RAID03863295 mmu-miR-7662-5p miRNA MIMAT0029830 Sae1 mRNA 56459 Prediction 0.1828 Sae1 RAID03886743 mmu-miR-328-3p miRNA MIMAT0000565 Sae1 mRNA 56459 Prediction 0.1828 Sae1 RAID03889619 mmu-miR-26a-5p miRNA MIMAT0000533 Sae1 mRNA 56459 Prediction 0.1828 Sae1 RAID04027727 mmu-miR-503-5p miRNA MIMAT0003188 Sae1 mRNA 56459 Prediction 0.1828