DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004529 mmu-miR-125b* 76454 Fbxo31 uccAGGGUUCUUGGACUGAACa ||::: |::||||||| uacUCUUGUACAUUUGACUUGu 2 20 129 150 [mm9:8:124075973-124075994:-] 0.5212 151 7 -17.77 -0.8950 MIMAT0004620 mmu-let-7a* 76454 Fbxo31 ccuUUCUGUCAUCUAACAUAUc ::|||: | ||||||| cccGGGACGCU-UCUUGUAUAg 2 20 99 119 [mm9:8:124076004-124076024:-] 0.5212 145 7 -14.20 -0.1293 MIMAT0004621 mmu-let-7b* 76454 Fbxo31 cccuuccgucauccAACAUAUc ||||||| ccccgggacgcuucUUGUAUAg 2 9 98 119 [mm9:8:124076004-124076025:-] 0.5212 140 7 -14.63 -0.1306 MIMAT0004622 mmu-let-7c-1* 76454 Fbxo31 ccuuucgaucuuccAACAUGUc ||||||| uguguaacauacucUUGUACAu 2 9 120 141 [mm9:8:124075982-124076003:-] 0.5212 140 7 -5.31 -0.6143 MIMAT0005439 mmu-let-7c-2* 76454 Fbxo31 ccuUUCUGUCAUCUAACAUAUc ::|||: | ||||||| cccGGGACGCU-UCUUGUAUAg 2 20 99 119 [mm9:8:124076004-124076024:-] 0.5212 145 7 -14.20 -0.1293 MIMAT0004623 mmu-let-7f* 76454 Fbxo31 cccuuccguuaucuAACAUAUc ||||||| ccccgggacgcuucUUGUAUAg 2 9 98 119 [mm9:8:124076004-124076025:-] 0.5212 140 7 -14.55 -0.1306 MIMAT0003190 mmu-miR-291b-3p 76454 Fbxo31 uguuugUUUUACCUACGUGAAa :::| | |||||||| ggguggGGGAAGCAUGCACUUu 2 17 38 59 [mm9:8:124076064-124076085:-] 0.5492 152 7 -14.74 -0.2818 MIMAT0014815 mmu-miR-3099* 76454 Fbxo31 guucCCGACCUUCCUUCG-ACc || ||| :|||||| || gcccGGGUGG-GGGAAGCAUGc 2 18 34 54 [mm9:8:124076069-124076089:-] 0.6145 123 0 -22.01 -0.1024 MIMAT0003502 mmu-miR-712 76454 Fbxo31 ccauggcgggcccACUUCCUc ||||||| uuguugguagcuaUGAAGGAg 2 9 147 167 [mm9:8:124075956-124075976:-] 0.5212 140 7 -18.23 -0.5711 MIMAT0005834 mmu-miR-466i 76454 Fbxo31 aucacacauACACA-CACACAUa ||| | ||||||| gacgcuucuUGUAUAGUGUGUAa 2 14 104 126 [mm9:8:124075997-124076019:-] 0.5212 148 7 -10.98 -1.1201 MIMAT0009406 mmu-miR-1941-3p 76454 Fbxo31 uacCCUCUAUGACGAUUC-UAc ||||| || |||||| || gaaGGAGA-AC-GCUAAGCAUg 2 19 161 180 [mm9:8:124075943-124075962:-] 0.5212 126 0 -20.24 -0.3119 MIMAT0011217 mmu-miR-2141 76454 Fbxo31 uugaaaagacUGUGGAGGa |||||||| aaaugaacgcACACCUCCu 2 10 62 80 [mm9:8:124076043-124076061:-] 0.5492 145 7 -17.02 -0.2775 MIMAT0000159 mmu-miR-149 76454 Fbxo31 ccCUCACUUCUGUGC-----CUCGGUCu ||| || | ||| ||||||| guGAGAAAAUAAACGGAGUUGAGCCAG- 2 22 181 207 [mm9:8:124075916-124075942:-] 0.4982 148 7 -18.34 -0.6755 MIMAT0000220 mmu-miR-190 76454 Fbxo31 uggAUUAUAUAGUUUGUAU-AGu ||:|:|:| |||||| || guaUAGUGUGU--AACAUACUCu 2 20 114 134 [mm9:8:124075989-124076009:-] 0.5212 124 0 -10.07 -0.6553 MIMAT0000238 mmu-miR-205 76454 Fbxo31 guCUGA--GGCCA-CCUUACUUCCu |||| ::||| | ||||||| uuGACUUGUUGGUAGCUAUGAAGGa 2 21 142 166 [mm9:8:124075957-124075981:-] 0.5212 154 7 -22.03 -0.8336 MIMAT0000385 mmu-miR-106a 76454 Fbxo31 gauggacgugacaauCGUGAAAc ||||||| gggugggggaagcauGCACUUUa 2 9 38 60 [mm9:8:124076063-124076085:-] 0.5492 140 7 -9.33 -0.6343 MIMAT0000386 mmu-miR-106b 76454 Fbxo31 uagacgugacaGU-CGUGAAAu || ||||||| ggugggggaagCAUGCACUUUa 2 11 39 60 [mm9:8:124076063-124076084:-] 0.5492 141 7 -12.39 -0.6343 MIMAT0000529 mmu-miR-20a 76454 Fbxo31 gauggacgugauaUUCGUGAAAu | ||||||| gggugggggaagcAUGCACUUUa 2 11 38 60 [mm9:8:124076063-124076085:-] 0.5492 142 7 -11.83 -0.6306 MIMAT0000540 mmu-miR-93 76454 Fbxo31 gauggACGUGCUU-GU-CGUGAAAc || : ||| || ||||||| ccgggUGGGGGAAGCAUGCACUUUa 2 19 36 60 [mm9:8:124076063-124076087:-] 0.6145 152 7 -14.05 -0.7649 MIMAT0000567 mmu-miR-329 76454 Fbxo31 uuuuuccaaucgaccCACACAa |||||| gacgcuucuuguauaGUGUGUa 2 8 104 125 [mm9:8:124075998-124076019:-] 0.5212 120 6 -7.65 -0.1060 MIMAT0000649 mmu-miR-17 76454 Fbxo31 gauggacgugaCAUUCGUGAAAc | | ||||||| gggugggggaaGCAUGCACUUUa 2 13 38 60 [mm9:8:124076063-124076085:-] 0.5492 144 7 -9.33 -0.6343 MIMAT0000658 mmu-miR-210 76454 Fbxo31 agucggcgacagugUGCGUGUc ||||||| cacuuuagaaaugaACGCACAc 2 9 54 75 [mm9:8:124076048-124076069:-] 0.5492 140 7 -13.22 -0.3970 MIMAT0000746 mmu-miR-381 76454 Fbxo31 uguCUCU-CGAACGGGAACAUAu |:|| |||| ||||||| cccGGGACGCUU---CUUGUAUa 2 20 99 118 [mm9:8:124076005-124076024:-] 0.5212 150 7 -17.14 -0.5154 MIMAT0003187 mmu-miR-20b 76454 Fbxo31 gauggacgugauacuCGUGAAAc ||||||| gggugggggaagcauGCACUUUa 2 9 38 60 [mm9:8:124076063-124076085:-] 0.5492 140 7 -9.33 -0.6306 MIMAT0004852 mmu-miR-190b 76454 Fbxo31 uuggGUUAUAGUUUGUAU-AGu :|:|:| |||||| || uguaUAGUGUGUAACAUACUCu 2 18 113 134 [mm9:8:124075989-124076010:-] 0.5212 121 0 -9.71 -0.6590

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G062711 G068755 Fbxo31 Mus musculus 76454

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Fbxo31 mmu-miR-210 beg:56 end:75 pic:3' AGTCGGCGACAGTGTGCGTGTC 5'& |.|| || ||||||| &5' TTAGAAA-TGA---ACGCACA- 3' Fbxo31 mmu-miR-205 beg:147 end:167 pic:3' GTCTGAGGCCA-CCTTACTTCCT 5'& ..||| | |||||||| &5' ------TTGGTAGCTATGAAGGA 3' Fbxo31 mmu-miR-2141 beg:67 end:81 pic:3' TTGAAAAGAC-TGTGGAGGA 5'& | ||||||||| &5' ---------GCACACCTCCT 3' Fbxo31 mmu-miR-2140 beg:12 end:31 pic:3' TGGTGGTTCTA-GACGTGGA 5'& .| .||| ||||||| &5' ---GCGGAGAGGCTGCACC- 3' Fbxo31 mmu-miR-381 beg:99 end:119 pic:3' TGTCTCT-CGAACGGGAACATAT 5'& |.|| ||| .|||||||| &5' ---GGGACGCT---TCTTGTATA 3' Fbxo31 mmu-miR-337-3p beg:203 end:220 pic:3' TCCGTAGTATATCCTCGACTT 5'& ||| ||| |||||||| &5' AGG-ATC------GAGCTGAA 3' Fbxo31 mmu-miR-673-3p beg:85 end:105 pic:3' CCACGTGTCTTGAGTCGGGGCCT 5'& ||| | |.| || |||||||. &5' GGTCC-CGG---TC-GCCCCGGG 3' Fbxo31 mmu-miR-3072star beg:74 end:93 pic:3' GGACGGGAGGGA--GCCCCAGGGA 5'& |||||. .|||||||| &5' -----CCTCCTCACTGGGGTCCC- 3' Fbxo31 mmu-let-7astar beg:99 end:120 pic:3' CCTTTCTGTCATCTAACATATC 5'& ..|||. |||||||| &5' ---GGGACGCTTC-TTGTATAG 3' Fbxo31 mmu-let-7bstar beg:99 end:120 pic:3' CCCTTCCGTCATCCAACATATC 5'& |||| || |||||||| &5' GGGAC-GCTTC---TTGTATAG 3' Fbxo31 mmu-let-7c-2star beg:99 end:120 pic:3' CCTTTCTGTCATCTAACATATC 5'& ..|||. |||||||| &5' ---GGGACGCTTC-TTGTATAG 3' Fbxo31 mmu-let-7fstar beg:99 end:120 pic:3' CCCTTCCGTTATCTAACATATC 5'& |||| || |||||||| &5' GGGAC-GCTTC---TTGTATAG 3' Fbxo31 mmu-let-7gstar beg:104 end:121 pic:3' CGTTCCGTCACCGGACATGTCA 5'& || |.||||.||| &5' -----GCTT---CTTGTATAGT 3' Fbxo31 mmu-miR-150 beg:28 end:48 pic:3' GTGACCATGTTCCCAACCCTCT 5'& || | ||| ||||.|| &5' ----GGGGCCCGGG-TGGGGGA 3' Fbxo31 mmu-miR-1982.1 beg:172 end:187 pic:3' GACACCCTCTTGTATCCCACTCT 5'& |.||| ||||||| &5' ---------AGCAT--GGTGAGA 3' Fbxo31 mmu-miR-205 beg:29 end:50 pic:3' GTCTGAGG-CCACCTTACTTCCT 5'& .|.| || |||||.. |||| &5' -GGGC-CCGGGTGGGG-GAAG-- 3' Fbxo31 mmu-miR-24 beg:193 end:207 pic:3' GACAAGGACGACTTGACTCGGT 5'& || ||||||| &5' -----------GAGTTGAGCCA 3' Fbxo31 mmu-miR-291b-3p beg:42 end:60 pic:3' TGTTTGTTTTACCT----ACGTGAAA 5'& ||| |||||||| &5' -----------GGAAGCATGCACTTT 3' Fbxo31 mmu-miR-296-5p beg:18 end:38 pic:3' TGTCCTAACTCCC------CCCCGGGA 5'& |||| ||||||| &5' --------GAGGCTGCACCGGGGCCC- 3' Fbxo31 mmu-miR-3099star beg:10 end:27 pic:3' GTTCCCGACCTTCCTTCGACC 5'& |||| ||| ||.|||| &5' ---GGGC-GGA--GAGGCTG- 3' Fbxo31 mmu-miR-509-5p beg:75 end:88 pic:3' TACTAACGGTGTAAGACCTCAT 5'& || || ||||.|| &5' -------CCTCA--CTGGGGT- 3' Fbxo31 mmu-miR-677 beg:67 end:88 pic:3' AGTCTTCGATT--AGTAGTGACTT 5'& || || ||||||.. &5' ------GCACACCTCCTCACTGGG 3' Fbxo31 mmu-miR-684 beg:153 end:171 pic:3' AACTGA-ACTTCCCTTTTGA 5'& .|| |||| |||.||| &5' ---GCTATGAA-GGAGAAC- 3' Fbxo31 mmu-miR-688 beg:214 end:236 pic:3' CTTATTCATCAGCGGACGCT 5'& ||||.| .|| |||||.|. &5' GAATGACCGGT-GCCTGTGG 3' Fbxo31 mmu-miR-712 beg:149 end:168 pic:3' CCATGGCGGGCCCACTTCCTC 5'& |||| ||. |||||||| &5' GGTA--GCTA---TGAAGGAG 3'

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Fbxo31 RAID00149138 mmu-miR-7019-5p miRNA MIMAT0027942 Fbxo31 mRNA 76454 Prediction 0.1828 Fbxo31 RAID00264545 mmu-miR-17-5p miRNA MIMAT0000649 Fbxo31 mRNA 76454 Prediction 0.2202 Fbxo31 RAID00279075 mmu-miR-470-5p miRNA MIMAT0002111 Fbxo31 mRNA 76454 Prediction 0.1828 Fbxo31 RAID00327942 mmu-miR-329-3p miRNA MIMAT0000567 Fbxo31 mRNA 76454 Prediction 0.1828 Fbxo31 RAID00328856 mmu-miR-210-3p miRNA MIMAT0000658 Fbxo31 mRNA 76454 Prediction 0.1828 Fbxo31 RAID00390320 mmu-miR-883b-5p miRNA MIMAT0004850 Fbxo31 mRNA 76454 Prediction 0.1828 Fbxo31 RAID00392244 mmu-miR-6943-3p miRNA MIMAT0027787 Fbxo31 mRNA 76454 Prediction 0.1828 Fbxo31 RAID00495313 mmu-miR-190a-5p miRNA MIMAT0000220 Fbxo31 mRNA 76454 Prediction 0.1828 Fbxo31 RAID00555163 mmu-miR-291b-3p miRNA MIMAT0003190 Fbxo31 mRNA 76454 Prediction 0.1828 Fbxo31 RAID00588855 mmu-miR-466k miRNA MIMAT0005845 Fbxo31 mRNA 76454 Prediction 0.1828 Fbxo31 RAID00592047 mmu-miR-486b-3p miRNA MIMAT0014944 Fbxo31 mRNA 76454 Prediction 0.1828 Fbxo31 RAID00678748 mmu-miR-93-5p miRNA MIMAT0000540 Fbxo31 mRNA 76454 Prediction 0.2202 Fbxo31 RAID00868976 mmu-miR-466l-5p miRNA MIMAT0017322 Fbxo31 mRNA 76454 Prediction 0.1828 Fbxo31 RAID00895686 mmu-miR-7015-5p miRNA MIMAT0027934 Fbxo31 mRNA 76454 Prediction 0.1828 Fbxo31 RAID00958189 mmu-miR-20a-5p miRNA MIMAT0000529 Fbxo31 mRNA 76454 Prediction 0.2202 Fbxo31 RAID01040031 mmu-miR-3057-3p miRNA MIMAT0014823 Fbxo31 mRNA 76454 Prediction 0.1828 Fbxo31 RAID01225980 mmu-miR-6954-5p miRNA MIMAT0027808 Fbxo31 mRNA 76454 Prediction 0.1828 Fbxo31 RAID01274644 mmu-miR-106a-5p miRNA MIMAT0000385 Fbxo31 mRNA 76454 Prediction 0.2202 Fbxo31 RAID01312420 mmu-miR-466i-3p miRNA MIMAT0005834 Fbxo31 mRNA 76454 Prediction 0.1828 Fbxo31 RAID01347663 mmu-miR-378a-5p miRNA MIMAT0000742 Fbxo31 mRNA 76454 Prediction 0.1828 Fbxo31 RAID01376956 mmu-miR-7064-5p miRNA MIMAT0028032 Fbxo31 mRNA 76454 Prediction 0.1828 Fbxo31 RAID01391587 mmu-miR-3620-5p miRNA MIMAT0029878 Fbxo31 mRNA 76454 Prediction 0.1828 Fbxo31 RAID01462631 mmu-miR-350-5p miRNA MIMAT0017040 Fbxo31 mRNA 76454 Prediction 0.1828 Fbxo31 RAID01463305 mmu-miR-3064-3p miRNA MIMAT0014835 Fbxo31 mRNA 76454 Prediction 0.1828 Fbxo31 RAID01541569 mmu-miR-125b-2-3p miRNA MIMAT0004529 Fbxo31 mRNA 76454 Prediction 0.1828 Fbxo31 RAID01718471 mmu-miR-5110 miRNA MIMAT0020618 Fbxo31 mRNA 76454 Prediction 0.1828 Fbxo31 RAID01787621 mmu-miR-339-5p miRNA MIMAT0000584 Fbxo31 mRNA 76454 Prediction 0.1828 Fbxo31 RAID01825464 mmu-miR-551b-3p miRNA MIMAT0003890 Fbxo31 mRNA 76454 Prediction 0.1828 Fbxo31 RAID01972347 mmu-miR-344e-5p miRNA MIMAT0014923 Fbxo31 mRNA 76454 Prediction 0.1828 Fbxo31 RAID02283262 mmu-miR-6907-5p miRNA MIMAT0027714 Fbxo31 mRNA 76454 Prediction 0.1828 Fbxo31 RAID02481695 mmu-miR-205-5p miRNA MIMAT0000238 Fbxo31 mRNA 76454 CLIP-seq//Prediction 0.6478 Fbxo31 RAID02602386 mmu-miR-7118-5p miRNA MIMAT0028133 Fbxo31 mRNA 76454 Prediction 0.1828 Fbxo31 RAID02613305 mmu-miR-6939-5p miRNA MIMAT0027778 Fbxo31 mRNA 76454 Prediction 0.1828 Fbxo31 RAID02617516 mmu-miR-5621-3p miRNA MIMAT0022370 Fbxo31 mRNA 76454 Prediction 0.1828 Fbxo31 RAID02643169 mmu-miR-6383 miRNA MIMAT0025129 Fbxo31 mRNA 76454 Prediction 0.1828 Fbxo31 RAID02653744 mmu-miR-1933-3p miRNA MIMAT0009397 Fbxo31 mRNA 76454 Prediction 0.1828 Fbxo31 RAID02681910 mmu-miR-134-3p miRNA MIMAT0016985 Fbxo31 mRNA 76454 Prediction 0.1828 Fbxo31 RAID02788018 mmu-miR-7081-5p miRNA MIMAT0028068 Fbxo31 mRNA 76454 Prediction 0.1828 Fbxo31 RAID02828663 mmu-miR-1952 miRNA MIMAT0009423 Fbxo31 mRNA 76454 Prediction 0.1828 Fbxo31 RAID02913155 mmu-miR-7226-3p miRNA MIMAT0028421 Fbxo31 mRNA 76454 Prediction 0.1828 Fbxo31 RAID02920512 mmu-miR-466d-5p miRNA MIMAT0004930 Fbxo31 mRNA 76454 Prediction 0.1828 Fbxo31 RAID02970217 mmu-miR-466i-5p miRNA MIMAT0017325 Fbxo31 mRNA 76454 Prediction 0.1828 Fbxo31 RAID03025202 mmu-miR-188-3p miRNA MIMAT0004541 Fbxo31 mRNA 76454 Prediction 0.1828 Fbxo31 RAID03096070 mmu-miR-20b-5p miRNA MIMAT0003187 Fbxo31 mRNA 76454 Prediction 0.2202 Fbxo31 RAID03104832 mmu-miR-1231-3p miRNA MIMAT0022358 Fbxo31 mRNA 76454 Prediction 0.1828 Fbxo31 RAID03176636 mmu-miR-539-3p miRNA MIMAT0017208 Fbxo31 mRNA 76454 Prediction 0.2202 Fbxo31 RAID03240026 mmu-miR-106b-5p miRNA MIMAT0000386 Fbxo31 mRNA 76454 Prediction 0.2202 Fbxo31 RAID03575990 mmu-miR-486a-3p miRNA MIMAT0017206 Fbxo31 mRNA 76454 Prediction 0.1828 Fbxo31 RAID03627796 mmu-miR-344h-5p miRNA MIMAT0022383 Fbxo31 mRNA 76454 Prediction 0.1828 Fbxo31 RAID03659918 mmu-miR-7222-3p miRNA MIMAT0028413 Fbxo31 mRNA 76454 Prediction 0.1828 Fbxo31 RAID03704309 mmu-miR-6914-3p miRNA MIMAT0027729 Fbxo31 mRNA 76454 Prediction 0.1828 Fbxo31 RAID03705222 mmu-miR-381-3p miRNA MIMAT0000746 Fbxo31 mRNA 76454 Prediction 0.2202 Fbxo31 RAID03865352 mmu-miR-190b-5p miRNA MIMAT0004852 Fbxo31 mRNA 76454 Prediction 0.1828 Fbxo31 RAID03884747 mmu-miR-6923-5p miRNA MIMAT0027746 Fbxo31 mRNA 76454 Prediction 0.1828 Fbxo31 RAID03932781 mmu-miR-326-5p miRNA MIMAT0017027 Fbxo31 mRNA 76454 Prediction 0.1828 Fbxo31 RAID03995066 mmu-miR-5623-5p miRNA MIMAT0022373 Fbxo31 mRNA 76454 Prediction 0.1828 Fbxo31 RAID04047275 mmu-miR-670-5p miRNA MIMAT0003736 Fbxo31 mRNA 76454 Prediction 0.1828 Fbxo31 RAID04058262 mmu-miR-149-5p miRNA MIMAT0000159 Fbxo31 mRNA 76454 CLIP-seq//Prediction 0.6308