DNA & RNA Element - microRNA |
Mirbase Acc | miRNA Name | Gene ID | Gene Symbol | miRNA Alignment | Alignment | Gene Alignment | miRNA Start | miRNA End | Gene Start | Gene End | Genome Coordinates | Conservation | Align Score | Seed Cat | Energy | mirSVR Score |
MIMAT0004519 | mmu-let-7g* | 30941 | Usp21 | cguuccGUCACCGGACAUGUCa | | || | ||||||| | guuuucCUGUCCCAUGUACAGa | 2 | 17 | 160 | 181 | [mm9:1:173212161-173212182:-] | 0.6885 | 148 | 7 | -12.27 | -1.0428 |
MIMAT0004519 | mmu-let-7g* | 30941 | Usp21 | cguuccgucACCGG-ACAUGUCa | || || ||||||| | ccagacccuUGACCAUGUACAGc | 2 | 14 | 187 | 209 | [mm9:1:173212133-173212155:-] | 0.6885 | 148 | 7 | -15.95 | -0.6515 |
MIMAT0000376 | mmu-miR-298 | 30941 | Usp21 | cccUUCUUGUCGGG-----AGGAGACGg | | | ||||||| ||||||| | accAUGUACAGCCCCCAGAACCUCUGCa | 2 | 21 | 198 | 225 | [mm9:1:173212117-173212144:-] | 0.6885 | 151 | 7 | -25.39 | -1.2883 |
MIMAT0004633 | mmu-miR-27a* | 30941 | Usp21 | acGAGUGUUCGUCG--AUUCGGGa | :|| ||| || | ||||||| | ccUUCCCAA-CACCCUUAAGCCCc | 2 | 21 | 32 | 54 | [mm9:1:173212289-173212311:-] | 0.7577 | 153 | 7 | -15.40 | -0.9546 |
MIMAT0004633 | mmu-miR-27a* | 30941 | Usp21 | acgaguguucgucgaUUCGGGa | |||||| | -----caccaucuugAAGCCCu | 2 | 8 | 1 | 17 | [mm9:1:173212326-173212342:-] | 0.7101 | 120 | 6 | -12.89 | -0.2332 |
MIMAT0000605 | mmu-miR-350 | 30941 | Usp21 | cuuucacauacccGAAACACUu | :||||||| | ugcaaucucacuuUUUUGUGAa | 2 | 10 | 222 | 243 | [mm9:1:173212099-173212120:-] | 0.6885 | 141 | 7 | -9.06 | -1.3392 |
MIMAT0000605 | mmu-miR-350 | 30941 | Usp21 | cuUUCACAUACCCGAAACACuu | | || ||| :|||||| | agACGUCUAU---UUUUGUGuc | 3 | 21 | 66 | 84 | [mm9:1:173212258-173212276:-] | 0.7577 | 128 | 0 | -6.32 | -0.1800 |
MIMAT0004691 | mmu-miR-382* | 30941 | Usp21 | uuuuucacAACAGGCACUUAcu | || |::|||||| | aaucucacUUUUUUGUGAAUaa | 3 | 15 | 225 | 246 | [mm9:1:173212096-173212117:-] | 0.6885 | 134 | 0 | -7.17 | -0.3345 |
MIMAT0004704 | mmu-miR-335-3p | 30941 | Usp21 | ccaguccUCGUUAUUACUUUUu | :||| :|||||| | aagcccuGGCACCUGUGAAAAc | 2 | 16 | 11 | 32 | [mm9:1:173212311-173212332:-] | 0.7101 | 131 | 6 | -7.33 | -0.1075 |
MIMAT0004786 | mmu-miR-540-5p | 30941 | Usp21 | ugucucagucucccaCUGGGAAc | ||||||| | guacagaaaccaccaGACCCUUg | 2 | 9 | 175 | 197 | [mm9:1:173212145-173212167:-] | 0.6885 | 140 | 7 | -18.89 | -0.8408 |
MIMAT0004786 | mmu-miR-540-5p | 30941 | Usp21 | ugucucagucucccacUGGGAAc | |||||| | ugaaaaccuucccaacACCCUUa | 2 | 8 | 26 | 48 | [mm9:1:173212295-173212317:-] | 0.7577 | 120 | 6 | -8.88 | -0.1680 |
MIMAT0003739 | mmu-miR-673-5p | 30941 | Usp21 | gaggUUCCUGGUC-UCGACACUc | ||| |::| | |||||| | cuugAAGCCCUGGCACCUGUGAa | 2 | 19 | 7 | 29 | [mm9:1:173212314-173212336:-] | 0.7101 | 125 | 6 | -14.87 | -0.1792 |
MIMAT0003462 | mmu-miR-684 | 30941 | Usp21 | aacugaacuuccCUUUUGa | |||||| | ccuggcaccuguGAAAACc | 2 | 8 | 15 | 33 | [mm9:1:173212310-173212328:-] | 0.7577 | 120 | 6 | -6.75 | -0.1146 |
MIMAT0003512 | mmu-miR-450b-3p | 30941 | Usp21 | uacGUACG-UUUUACAAGGGUUa | | ||: |||| ||||||| | gcaCCUGUGAAAACCUUCCCAAc | 2 | 20 | 19 | 41 | [mm9:1:173212302-173212324:-] | 0.7577 | 158 | 7 | -12.11 | -0.5824 |
MIMAT0004238 | mmu-miR-743a | 30941 | Usp21 | agaUG-AG-UCGAACCACAGAAAg | || || | :|| |||||||| | cagACGUCUAUUUUUGUGUCUUUu | 2 | 20 | 65 | 88 | [mm9:1:173212254-173212277:-] | 0.7577 | 157 | 7 | -15.57 | -1.0684 |
MIMAT0004840 | mmu-miR-743b-3p | 30941 | Usp21 | agaUAAGUCGUACUACAGAAAg | :| :| : | :||||||| | gacGUCUAUUUUUGUGUCUUUu | 2 | 20 | 67 | 88 | [mm9:1:173212254-173212275:-] | 0.7577 | 147 | 7 | -14.46 | -1.0709 |
MIMAT0004888 | mmu-miR-493 | 30941 | Usp21 | ggACCGUGUGUCA-UCCUGGAAGu | |||||| | || | |||||| | ccUGGCAC-CUGUGAAAACCUUCc | 2 | 22 | 15 | 37 | [mm9:1:173212306-173212328:-] | 0.7577 | 134 | 6 | -26.88 | -0.1392 |
MIMAT0005830 | mmu-miR-466l | 30941 | Usp21 | uuAUACACACGUACAUAAAUAu | | | |||| || |||||| | cuUUUUUGUGAAUAAAUUUAUu | 2 | 21 | 232 | 253 | [mm9:1:173212089-173212110:-] | 0.6885 | 136 | 6 | -6.33 | -0.3047 |
MIMAT0007868 | mmu-miR-1903 | 30941 | Usp21 | acagaguccuucuucUUCUUCc | |||||| | guuauuuuuuuuauuAAGAAGu | 2 | 8 | 125 | 146 | [mm9:1:173212196-173212217:-] | 0.7231 | 120 | 6 | -7.20 | -0.1091 |
MIMAT0007875 | mmu-miR-1898 | 30941 | Usp21 | cuaggggacaCUUGGAACUGGa | || |||||||| | gaaaccaccaGACCCUUGACCa | 2 | 13 | 180 | 201 | [mm9:1:173212141-173212162:-] | 0.6885 | 152 | 7 | -20.34 | -0.8612 |
MIMAT0009399 | mmu-miR-1935 | 30941 | Usp21 | ucUCUAGGCGGUC--GGAGACGga | | | || |||| ||||||| | guACAGCCCCCAGAACCUCUGCaa | 3 | 21 | 203 | 226 | [mm9:1:173212116-173212139:-] | 0.6885 | 143 | 0 | -23.00 | -0.1332 |
MIMAT0009434 | mmu-miR-1961 | 30941 | Usp21 | aagauuGAUGAUGGAGu | | |:|||||| | aagcccCCAUUACCUCa | 2 | 12 | 48 | 64 | [mm9:1:173212278-173212285,173212287-173212295:-] | 0.7577 | 131 | 6 | -12.48 | -0.1063 |
MIMAT0009439 | mmu-miR-1966 | 30941 | Usp21 | cugagagagGACUCG-GUCGAGGGaa | :||: : :||||||| | ggaggagggUUGGUUGUAGCUCCCgu | 3 | 17 | 101 | 126 | [mm9:1:173212216-173212241:-] | 0.7577 | 127 | 0 | -17.35 | -0.2404 |
MIMAT0011211 | mmu-miR-2135 | 30941 | Usp21 | caAAGCCGGGGUUC-UGGAGa | | | ||||| || ||||| | ugUACAGCCCCCAGAACCUCu | 2 | 19 | 202 | 222 | [mm9:1:173212120-173212140:-] | 0.6885 | 130 | 0 | -22.90 | -0.7223 |
MIMAT0000121 | mmu-let-7g | 30941 | Usp21 | uugacauguuuGAUGAUGGAGu | | |:|||||| | cccuuaagcccCCAUUACCUCa | 2 | 12 | 43 | 64 | [mm9:1:173212278-173212285,173212287-173212300:-] | 0.7577 | 131 | 6 | -14.01 | -0.1063 |
MIMAT0000122 | mmu-let-7i | 30941 | Usp21 | uugucguguuuGAUGAUGGAGu | | |:|||||| | cccuuaagcccCCAUUACCUCa | 2 | 12 | 43 | 64 | [mm9:1:173212278-173212285,173212287-173212300:-] | 0.7577 | 131 | 6 | -14.50 | -0.1073 |
MIMAT0000126 | mmu-miR-27b | 30941 | Usp21 | cguCUU--GAAUCGGUGACACUu | ||| | |:|| |||||| | cuuGAAGCCCUGGCACCUGUGAa | 2 | 19 | 7 | 29 | [mm9:1:173212314-173212336:-] | 0.7101 | 125 | 6 | -15.14 | -0.1826 |
MIMAT0000213 | mmu-miR-184 | 30941 | Usp21 | ugggaauaguCAAGAGG-CAGGu | |||:||| |||| | cuuccgccuuGUUUUCCUGUCCc | 2 | 13 | 150 | 172 | [mm9:1:173212170-173212192:-] | 0.6885 | 120 | 0 | -19.28 | -1.1709 |
MIMAT0000235 | mmu-miR-202-3p | 30941 | Usp21 | agaaggguacgcgauAUGGAGa | |||||| | cccuuaagcccccauUACCUCa | 2 | 8 | 43 | 64 | [mm9:1:173212278-173212285,173212287-173212300:-] | 0.7577 | 120 | 6 | -13.60 | -0.1042 |
MIMAT0000383 | mmu-let-7d | 30941 | Usp21 | uuGAUACGUUGGAUGAUGGAGa | :|| || || |:|||||| | ccUUAAGC-CCCCAUUACCUCa | 2 | 21 | 44 | 64 | [mm9:1:173212278-173212285,173212287-173212299:-] | 0.7577 | 142 | 6 | -14.78 | -0.1042 |
MIMAT0000385 | mmu-miR-106a | 30941 | Usp21 | gauggacgugacaaucGUGAAAc | |||||| | agaaccucugcaaucuCACUUUu | 2 | 8 | 214 | 236 | [mm9:1:173212106-173212128:-] | 0.6885 | 120 | 6 | -12.09 | -0.1205 |
MIMAT0000386 | mmu-miR-106b | 30941 | Usp21 | uagacgugacagucGUGAAAu | |||||| | aaccucugcaaucuCACUUUu | 2 | 8 | 216 | 236 | [mm9:1:173212106-173212126:-] | 0.6885 | 120 | 6 | -14.49 | -0.1205 |
MIMAT0000521 | mmu-let-7a | 30941 | Usp21 | uuGAUAUGUUGGAUGAUGGAGu | :|| :| || |:|||||| | ccUUAAGC-CCCCAUUACCUCa | 2 | 21 | 44 | 64 | [mm9:1:173212278-173212285,173212287-173212299:-] | 0.7577 | 138 | 6 | -16.86 | -0.1052 |
MIMAT0000522 | mmu-let-7b | 30941 | Usp21 | uugguguguuGGAUGAUGGAGu | || |:|||||| | cccuuaagccCCCAUUACCUCa | 2 | 13 | 43 | 64 | [mm9:1:173212278-173212285,173212287-173212300:-] | 0.7577 | 136 | 6 | -18.78 | -0.1063 |
MIMAT0000523 | mmu-let-7c | 30941 | Usp21 | uuGGUAUGU-UGGAUGAUGGAGu | || || : || |:|||||| | acCCUUAAGCCCCCAUUACCUCa | 2 | 21 | 42 | 64 | [mm9:1:173212278-173212285,173212287-173212301:-] | 0.7577 | 139 | 6 | -19.58 | -0.1052 |
MIMAT0000524 | mmu-let-7e | 30941 | Usp21 | uuGAUAUGUUGGAG-GAUGGAGu | || || : || | :|||||| | ccCU-UAAGCCCCCAUUACCUCa | 2 | 21 | 43 | 64 | [mm9:1:173212278-173212285,173212287-173212300:-] | 0.7577 | 133 | 6 | -17.23 | -0.1052 |
MIMAT0000525 | mmu-let-7f | 30941 | Usp21 | uugauauguuaGAUGAUGGAGu | | |:|||||| | cccuuaagcccCCAUUACCUCa | 2 | 12 | 43 | 64 | [mm9:1:173212278-173212285,173212287-173212300:-] | 0.7577 | 131 | 6 | -12.48 | -0.1063 |
MIMAT0000529 | mmu-miR-20a | 30941 | Usp21 | gaUGGACGUGAUAUUCGUGAAAu | |||| ::| || |||||| | gaACCUCUGCAAU-CUCACUUUu | 2 | 22 | 215 | 236 | [mm9:1:173212106-173212127:-] | 0.6885 | 127 | 6 | -12.99 | -0.1205 |
MIMAT0000537 | mmu-miR-27a | 30941 | Usp21 | cgcCUU--GAAUCGGUGACACUu | ||| | |:|| |||||| | cuuGAAGCCCUGGCACCUGUGAa | 2 | 19 | 7 | 29 | [mm9:1:173212314-173212336:-] | 0.7101 | 125 | 6 | -16.34 | -0.1826 |
MIMAT0000540 | mmu-miR-93 | 30941 | Usp21 | gaUGGACGUGCUUGUCGUGAAAc | |||| ::| ||: |||||| | gaACCUCUGC-AAUCUCACUUUu | 2 | 22 | 215 | 236 | [mm9:1:173212106-173212127:-] | 0.6885 | 131 | 6 | -12.51 | -0.1230 |
MIMAT0000545 | mmu-miR-98 | 30941 | Usp21 | uuguuauguugaaUGAUGGAGu | |:|||||| | cccuuaagcccccAUUACCUCa | 2 | 10 | 43 | 64 | [mm9:1:173212278-173212285,173212287-173212300:-] | 0.7577 | 129 | 6 | -12.48 | -0.1052 |
MIMAT0000649 | mmu-miR-17 | 30941 | Usp21 | gauggacgugacauucGUGAAAc | |||||| | agaaccucugcaaucuCACUUUu | 2 | 8 | 214 | 236 | [mm9:1:173212106-173212128:-] | 0.6885 | 120 | 6 | -12.09 | -0.1205 |
MIMAT0000653 | mmu-miR-28 | 30941 | Usp21 | gagUUAUCUGACACUCGAGGaa | ::| |::||| |||||| | gagGGUUGGUUGU-AGCUCCcg | 3 | 20 | 105 | 125 | [mm9:1:173212217-173212237:-] | 0.7577 | 137 | 0 | -16.41 | -0.1190 |
MIMAT0000741 | mmu-miR-377 | 30941 | Usp21 | uguUUUCAACGGAAACACACUa | || | |:||| ||||| | ugcAAUCUCACUUUUUUGUGAa | 2 | 20 | 222 | 243 | [mm9:1:173212099-173212120:-] | 0.6885 | 127 | 0 | -9.78 | -0.2223 |
MIMAT0003187 | mmu-miR-20b | 30941 | Usp21 | gaUGGACGUGAUACUCGUGAAAc | |||| ::| || |||||| | gaACCUCUGCAAU-CUCACUUUu | 2 | 22 | 215 | 236 | [mm9:1:173212106-173212127:-] | 0.6885 | 127 | 6 | -12.09 | -0.1205 |
MIMAT0004828 | mmu-miR-708 | 30941 | Usp21 | gggUCGAUCUAACAUUCGAGGaa | :| | |:|||| |||||| | ggaGGGUUGGUUGU-AGCUCCcg | 3 | 21 | 104 | 125 | [mm9:1:173212217-173212238:-] | 0.7577 | 142 | 0 | -19.53 | -0.1167 |