Fbxo6
DNA & RNA Element - microRNA
Mirbase AccmiRNA NameGene IDGene SymbolmiRNA AlignmentAlignmentGene AlignmentmiRNA StartmiRNA EndGene StartGene EndGenome CoordinatesConservationAlign ScoreSeed CatEnergymirSVR Score
MIMAT0004537mmu-miR-154*50762Fbxo6uuauccAGUUGGCACAU-ACUAa |||||: ||| |||| agcccaUCAACUCAGUAGUGAUa2175476[mm9:4:147519949-147519971:-]0.52041240-9.57-0.3799
MIMAT0004580mmu-miR-34c*50762Fbxo6ggaccgacacaccaAUCACUAa ||||||| gcccaucaacucagUAGUGAUa295576[mm9:4:147519949-147519970:-]0.52041407-8.67-0.4333
MIMAT0004581mmu-miR-34b-3p50762Fbxo6cuaccgucaccUCAAUCACUAa || ||||||| cccaucaacucAG-UAGUGAUa2125676[mm9:4:147519949-147519969:-]0.52041417-8.77-0.4026
MIMAT0004583mmu-miR-130b*50762Fbxo6ucaucaCGU-UGUCCCUUUCUCa ||| | | ||||||| uugcugGCACUCUGAGAAAGAGc217156178[mm9:4:147519847-147519869:-]0.57881477-12.40-0.1827
MIMAT0004620mmu-let-7a*50762Fbxo6ccuuuCUGUCAUCUAACA-UAUc |||| | :|||| ||| gcucuGACAUUUUGUUGUAAUAa21890112[mm9:4:147519913-147519935:-]0.52041210-6.86-0.9838
MIMAT0005439mmu-let-7c-2*50762Fbxo6ccuuuCUGUCAUCUAACA-UAUc |||| | :|||| ||| gcucuGACAUUUUGUUGUAAUAa21890112[mm9:4:147519913-147519935:-]0.52041210-6.86-0.9838
MIMAT0004626mmu-miR-18a*50762Fbxo6guCUUCCUC-GUGAA---UCCCGUCa ||| ||| | ||| ||||||| gaGAAAGAGCCCCUUCUCAGGGCAGc221169194[mm9:4:147519831-147519856:-]0.57881587-23.70-0.1437
MIMAT0003728mmu-miR-374*50762Fbxo6gagccuguuacuauUAUGUUGg ||||||| ugagcacuugcccuAUACAACc292546[mm9:4:147519979-147520000:-]0.49801407-12.37-0.1456
MIMAT0003894mmu-miR-764-5p50762Fbxo6uccuccuguacACUCGUGg ||||||| ucccagucccaUGAGCACu291432[mm9:4:147519993-147520011:-]0.47561407-11.44-0.5690
MIMAT0003897mmu-miR-75950762Fbxo6caguUUUAACAAACGUGAGACg :::||| | |||||||| agguGGGUUGCUGGCACUCUGa219149170[mm9:4:147519855-147519876:-]0.55231627-19.30-0.2038
MIMAT0004841mmu-miR-87150762Fbxo6guACUGACCGUGAUUAGACU-UAu ||:| ||| : ||||| || guUGGCACCCACAGCUCUGACAUu22277100[mm9:4:147519925-147519948:-]0.52041210-13.77-0.7051
MIMAT0004856mmu-miR-10550762Fbxo6ugGUGUUCGUAGACUCGUGAACc | ||: | |||||||||| cuCCCAGUCCCAUGAGCACUUGc2221335[mm9:4:147519990-147520012:-]0.47561617-21.64-0.1901
MIMAT0004893mmu-miR-574-5p50762Fbxo6ugUGUGAGUGUGUGUGUGU-GAGu |:| |:: :||| |||| ||| ugAUAGUUG-GCACCCACAGCUCu2227294[mm9:4:147519931-147519953:-]0.52041230-15.13-0.3336
MIMAT0004938mmu-miR-875-3p50762Fbxo6guaucggAGUCAUAAAAGUCc | | |:||||||| guuguaaUAAAUGUUUUCAGu215103123[mm9:4:147519902-147519922:-]0.52041507-8.31-0.5406
MIMAT0000135mmu-miR-125a-5p50762Fbxo6aguguccaauuucccAGAGUCCCu |||||||| ugagaaagagccccuUCUCAGGGc210168191[mm9:4:147519834-147519857:-]0.57881457-15.89-0.3370
MIMAT0000136mmu-miR-125b-5p50762Fbxo6aguguucaaucccAGAGUCCCu |||||||| agaaagagccccuUCUCAGGGc210170191[mm9:4:147519834-147519855:-]0.57881457-15.15-0.3343
MIMAT0000368mmu-miR-291a-3p50762Fbxo6cguguguuucaccUUCGUGAAa :||||||| cucccagucccauGAGCACUUg2101334[mm9:4:147519991-147520012:-]0.47561417-10.42-0.2039
MIMAT0000372mmu-miR-29450762Fbxo6uguguguuuucccUUCGUGAAa :||||||| cucccagucccauGAGCACUUg2101334[mm9:4:147519991-147520012:-]0.47561417-9.72-0.2021
MIMAT0000373mmu-miR-29550762Fbxo6ucugaguuuucaucaUCGUGAAa ||||||| gcucccagucccaugAGCACUUg291234[mm9:4:147519991-147520013:-]0.47561407-12.68-0.2058
MIMAT0000380mmu-miR-302a50762Fbxo6aguGGUU-UUGUACCUUCGUGAAu |||: |||| ||||||| cucCCAGUCCCAUG--AGCACUUg2211334[mm9:4:147519991-147520012:-]0.47561487-20.01-0.1862
MIMAT0000531mmu-miR-2250762Fbxo6ugucAAGAAGUUGACCGUCGAa ||| |||: ||||||| ccccUUC-UCAG--GGCAGCUu219178196[mm9:4:147519829-147519847:-]0.57881497-18.77-0.1197
MIMAT0000609mmu-miR-35150762Fbxo6guccgagUUUCCC---GAGGAGUCCCu |||| | ||:||||||| cucugagAAAGAGCCCCUUCUCAGGGc218165191[mm9:4:147519834-147519860:-]0.57881567-22.02-0.3288
MIMAT0003374mmu-miR-302b50762Fbxo6gaugauuuuGUACCUUCGUGAAu |||| ||||||| ucccaguccCAUG--AGCACUUg2151434[mm9:4:147519991-147520011:-]0.47561477-13.71-0.1862
MIMAT0003377mmu-miR-302d50762Fbxo6ugugaguuuGUACCUUCGUGAAu |||| ||||||| ucccaguccCAUG--AGCACUUg2151434[mm9:4:147519991-147520011:-]0.47561477-16.42-0.1862
MIMAT0004853mmu-miR-87450762Fbxo6agcCAGGGAGCCCGGUCCCGUc | ||||: :||||||| agaGCCCCUU--CUCAGGGCAg220174193[mm9:4:147519832-147519851:-]0.57881487-25.58-0.1871
DNA & RNA Element - TRANSFAC
AccessionASDescriptionSpeciesEntrezPubmedBinding Info
G066047Fbxo6Mus musculus50762
DNA & RNA Element - RepTar
Gene NamemiRNABeginEndProfile
Fbxo6mmu-miR-302bbeg:20end:34pic:3' GATGATTTTGTACCTTCGTGAAT 5'& |||| |||||||. &5' ---------CATG--AGCACTTG 3'
Fbxo6mmu-miR-294beg:23end:34pic:3' TGTGTGTTTTCCCTTCGTGAAA 5'& .||||||| &5' -------------GAGCACTT- 3'
Fbxo6mmu-miR-374starbeg:28end:47pic:3' GAGCCTGTTACTATTATGTTGG 5'& ||.| | |||||||| &5' CTTGCCCT------ATACAACC 3'
Fbxo6mmu-miR-759beg:151end:170pic:3' CAGTTTTAACAAACGTGAGACG 5'& ...||| |||||||| &5' ----GGGTTGCTGGCACTCTG- 3'
Fbxo6mmu-miR-874beg:176end:194pic:3' AGCCAGGGAGCCCGGTCCCGTC 5'& ||||. .|||||||| &5' -----CCCTTC--TCAGGGCAG 3'
Fbxo6mmu-miR-125a-5pbeg:180end:191pic:3' AGTGTCCAATTTCCCAGAGTCCCT 5'& |||||||| &5' ---------------TCTCAGGG- 3'
Fbxo6mmu-miR-125b-5pbeg:180end:191pic:3' AGTGTTCAATCCCAGAGTCCCT 5'& |||||||| &5' -------------TCTCAGGG- 3'
Fbxo6mmu-miR-130bstarbeg:159end:177pic:3' TCATCACGTT-GTCCCTTTCTCA 5'& ||| | | ||||||| &5' ------GCACTCTGAGAAAGAG- 3'
Fbxo6mmu-miR-22beg:178end:197pic:3' TGTCAAGAAGTTGACCGTCGAA 5'& |||| |||||||| &5' ------CTTCTCAGGGCAGCTT 3'
Fbxo6mmu-miR-290-5pbeg:123end:142pic:3' TTTCACGGGGGT---ATCAAACTCA 5'& |||| |.||||||| &5' --------CCCAGCCTGGTTTGAG- 3'
Fbxo6mmu-miR-292-5pbeg:126end:142pic:3' GTTTTCTCGGGGGTCAAACTCA 5'& ||||. .||||||| &5' ------AGCCT--GGTTTGAG- 3'
Fbxo6mghv-miR-M1-5beg:46end:67pic:3' CTCTGC-TGGGCTAGAGTTGAGA 5'& .|.| .||| ||||||| &5' -GGGCAAGCCCA---TCAACTC- 3'
Fbxo6mmu-miR-124starbeg:16end:32pic:3' TAGTTCCAGGCGACACTTGTGC 5'& |||| | |||.||| &5' ------GTCC-CA-TGAGCAC- 3'
Fbxo6mmu-miR-129-3pbeg:127end:147pic:3' TACGAAAAACCCCATTCCCGAA 5'& || ||| |.||||||| &5' --GCC---TGGTTTGAGGGCTT 3'
Fbxo6mmu-miR-134beg:176end:199pic:3' GGGGAGA--CCAGTTGGTCAGTGT 5'& |||.||| || ||.|. ||. &5' CCCTTCTCAGGGCAGCT--TCG-- 3'
Fbxo6mmu-miR-18astarbeg:172end:194pic:3' GTCTTCCTCGT----GAATCCCGTCA 5'& |||| || ||||||| &5' ------GAGCCCCTTCTCAGGGCAG- 3'
Fbxo6mmu-miR-1983beg:140end:156pic:3' TCTTTTGTACGAG-GTCCACTC 5'& |||. ||||||.| &5' ---------GCTTACAGGTGGG 3'
Fbxo6mmu-miR-219beg:0end:11pic:3' TCTTAACGCAAACCTGTTAGT 5'& |||.||.||| &5' -----------TGGGCAGTCA 3'
Fbxo6mmu-miR-295beg:14end:34pic:3' TCTGAGTTTTCATCATCGTGAAA 5'& ||. ||||||| &5' -----CAGTCCCATGAGCACTT- 3'
Fbxo6mmu-miR-302abeg:13end:34pic:3' AGTGGTTTT-GTACCTTCGTGAAT 5'& || |||. |||| |||||||. &5' TC-CCAGTCCCATG--AGCACTTG 3'
Fbxo6mmu-miR-302dbeg:14end:34pic:3' TGTGAGTTTGTACCTTCGTGAAT 5'& || || |||| |||||||. &5' -CAGTCC--CATG--AGCACTTG 3'
Fbxo6mmu-miR-30astarbeg:152end:176pic:3' CGACGTTTGT-AGGCTGACTTTC 5'& |.||| .|| ||.|| ||||| &5' GTTGCTGGCACTCTGA--GAAAG 3'
Fbxo6mmu-miR-30estarbeg:152end:176pic:3' CGACATTTGT-AGGCTGACTTTC 5'& |.|| ..|| ||.|| ||||| &5' GTTGCTGGCACTCTGA--GAAAG 3'
Fbxo6mmu-miR-3474beg:178end:191pic:3' CTTAGGTGCAGAGGAGGGTCCC 5'& |.||.||||| &5' ------------CTTCTCAGGG 3'
Fbxo6mmu-miR-351beg:171end:191pic:3' GTCCGAGTTTCCC-GAGGAGTCCCT 5'& |.|| ||.||||||| &5' -------AGAGCCCCTTCTCAGGG- 3'
Fbxo6mmu-miR-412beg:139end:156pic:3' GCCGATCACCTGGTCCACTT 5'& |||| ||||||.. &5' -GGCTTA-----CAGGTGGG 3'
Fbxo6mmu-miR-450b-3pbeg:99end:124pic:3' TACGTACGT--TTTACAAGGGTTA 5'& ||. ||.| ||||||| ||.| &5' -TGT-TGTAATAAATGTTTTCAGT 3'
Fbxo6mmu-miR-453beg:181end:197pic:3' ACGTTCGAGTGATACTCCGTTGGA 5'& |||| .||||.|.| &5' ------CTCA-----GGGCAGCTT 3'
Fbxo6mmu-miR-467bbeg:20end:34pic:3' GTATATGTACGTCCGTGAATG 5'& |||| ||||||.| &5' ------CATGA--GCACTTGC 3'
Fbxo6mmu-miR-671-5pbeg:124end:149pic:3' GAGGTCGGG--GAGGTCCCGAAGGA 5'& ||||||. .|. ||||||| | &5' --CCAGCCTGGTTTGAGGGCTTAC- 3'
Fbxo6mmu-miR-696beg:81end:100pic:3' GGGTGTCGTT-CGTGTGCG 5'& |||||||| | |||. &5' CCCACAGCTCTG-ACAT-- 3'
Fbxo6mmu-miR-696beg:42end:61pic:3' GGGTGTCGTTCGTGTGCG 5'& ||. .|||||| ||. &5' CCTTGGGCAAGCCCAT-- 3'
Fbxo6mmu-miR-764-5pbeg:22end:33pic:3' TCCTCCTGTACACTCGTGG 5'& |||||||. &5' -----------TGAGCACT 3'
Fbxo6mmu-miR-883a-5pbeg:52end:71pic:3' CATTGACGATGAAGAGAGTCGT 5'& || |||||.| &5' ------GCCCATCAACTCAGTA 3'
Fbxo6mmu-miR-883b-5pbeg:52end:71pic:3' ACTGACGATGGGTAA--GAGTCAT 5'& .||||| ||||||| &5' --------GCCCATCAACTCAGTA 3'
DNA & RNA Element - RAID2
Gene NameRAID IDInteractor 1Category 1ID 1Interactor 2Category 2ID 2MethodsScore
Fbxo6RAID00108570mmu-miR-6481miRNAMIMAT0027339Fbxo6mRNA50762Prediction0.1828
Fbxo6RAID00759809mmu-miR-125b-5pmiRNAMIMAT0000136Fbxo6mRNA50762Prediction0.1828
Fbxo6RAID01016874mmu-miR-874-3pmiRNAMIMAT0004853Fbxo6mRNA50762Prediction0.1828
Fbxo6RAID01703301mmu-miR-294-3pmiRNAMIMAT0000372Fbxo6mRNA50762Prediction0.1828
Fbxo6RAID02835070mmu-miR-302b-3pmiRNAMIMAT0003374Fbxo6mRNA50762Prediction0.1828
Fbxo6RAID03040976mmu-miR-125a-5pmiRNAMIMAT0000135Fbxo6mRNA50762Prediction0.1828
Fbxo6RAID03239326mmu-miR-22-3pmiRNAMIMAT0000531Fbxo6mRNA50762Prediction0.1828
Fbxo6RAID03283672mmu-miR-291a-3pmiRNAMIMAT0000368Fbxo6mRNA50762Prediction0.1828
Fbxo6RAID03290397mmu-miR-351-5pmiRNAMIMAT0000609Fbxo6mRNA50762Prediction0.1828
Fbxo6RAID03466052mmu-miR-295-3pmiRNAMIMAT0000373Fbxo6mRNA50762Prediction0.1828
Fbxo6RAID03592477mmu-miR-302a-3pmiRNAMIMAT0000380Fbxo6mRNA50762Prediction0.1828
Fbxo6RAID03860393mmu-miR-3970miRNAMIMAT0019355Fbxo6mRNA50762Prediction0.1828
Fbxo6RAID04031961mmu-miR-302d-3pmiRNAMIMAT0003377Fbxo6mRNA50762Prediction0.1828