DNA & RNA Element - AREsite Gene Name Motif CDS Area ARE Area Evidence Usp13 ATTTA 86-2662 3040-3044;3904-3908

DNA & RNA Element - circBase circRNA ID Chrom Start End Strand mmu_circ_0001118 chr3 32760692 32764888 +

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004523 mmu-miR-29b* 72607 Usp13 auUUGGUGGUAUACUUUG-GUCg |:| :|| || |||| ||| uaAGCAGCCUUACAAAACUCAGu 2 21 1825 1847 [mm9:3:32833980-32834002:+] 0.5539 124 0 -12.08 -0.1823 MIMAT0004527 mmu-miR-124* 72607 Usp13 uaguUCCAGGCGACACUUGUgc | || : :| |||||| uugcAUGUAUAUUUUGAACAaa 3 19 1981 2002 [mm9:3:32834136-32834157:+] 0.5539 130 0 -7.76 -0.2655 MIMAT0000154 mmu-miR-142-5p 72607 Usp13 ucaucacgaaagaUGAAAUAc ||||||| uuaaucacaucaaACUUUAUa 2 9 470 490 [mm9:3:32832625-32832645:+] 0.5673 140 7 -5.61 -1.1000 MIMAT0000230 mmu-miR-199a-3p 72607 Usp13 auUGGUUACACGU-CUGAUG-ACa :| :||| | | |||||| || caGCAGAUGCGGAGGACUACAUGg 2 21 110 133 [mm9:3:32832265-32832288:+] 0.5685 123 0 -15.84 -0.1888 MIMAT0000240 mmu-miR-207 72607 Usp13 cucccUCCUCUCG--GUCCUCUUCg | || | | | ||||||| uggucACGACACCUUCUGGAGAAGa 2 19 159 183 [mm9:3:32832314-32832338:+] 0.6446 145 7 -15.19 -0.7549 MIMAT0004572 mmu-miR-290-3p 72607 Usp13 ccCGAAUUUUGAUCCGCCGUGAAa | | || || | ||||||| auGGUGCAACCUUG--GGCACUUu 2 23 1007 1028 [mm9:3:32833162-32833183:+] 0.5808 147 7 -14.38 -0.1439 MIMAT0000370 mmu-miR-292-3p 72607 Usp13 ugugaguuUUGGACCGCCGUGAAa ||||| | ||||||| cauggugcAACCUUG-GGCACUUu 2 17 1006 1028 [mm9:3:32833161-32833183:+] 0.5808 158 7 -19.36 -0.1411 MIMAT0004628 mmu-miR-21* 72607 Usp13 cugUCGGGUAGCUGACGACAAc :||: | : ::||||||| aaaGGCUAAAUAGUUGCUGUUa 2 20 582 603 [mm9:3:32832737-32832758:+] 0.5625 151 7 -12.70 -0.8941 MIMAT0004628 mmu-miR-21* 72607 Usp13 cuguCGGGUAGCUGAC-GACAAc | ||:| | :|| ||||| agauGGCCGUGGUUUGUCUGUUu 2 19 893 915 [mm9:3:32833048-32833070:+] 0.5674 122 0 -17.43 -0.3385 MIMAT0004629 mmu-miR-22* 72607 Usp13 auuUCGAACGGUGACUUCUUGa | ||| |:: ||||||| gacACCUU-CUGGAGAAGAACu 2 20 166 186 [mm9:3:32832321-32832341:+] 0.6446 149 7 -13.44 -0.1253 MIMAT0004629 mmu-miR-22* 72607 Usp13 auuucgaacggugaCUUCUUga |||||| ccaaaaaagaaaaaGAAGAAaa 3 9 47 68 [mm9:3:32832202-32832223:+] 0.5928 120 0 -6.38 -0.2974 MIMAT0004630 mmu-miR-26b* 72607 Usp13 cuCGGUUCAUUACCUCUUGUCc |||: | | |||||||| uaGCCGUGGCCU-GAGAACAGa 2 21 1102 1122 [mm9:3:32833257-32833277:+] 0.5260 150 7 -19.44 -0.1677 MIMAT0004630 mmu-miR-26b* 72607 Usp13 cucggUUCAUUACCUCUUGUCc ||| |:| ||||||| aaaugAAGAAGU--AGAACAGa 2 18 1301 1320 [mm9:3:32833456-32833475:+] 0.5375 150 7 -10.58 -0.7827 MIMAT0004630 mmu-miR-26b* 72607 Usp13 cucgguucauuaccUCUUGUCc ||||||| ugaagaaccuucacAGAACAGa 2 9 1581 1602 [mm9:3:32833736-32833757:+] 0.4829 140 7 -12.06 -0.2457 MIMAT0000544 mmu-miR-129-3p 72607 Usp13 uacgaaaaaccCCAUUCCCGAa |||||||||| ggggggucacuGGUAAGGGCUu 2 12 290 311 [mm9:3:32832445-32832466:+] 0.5500 155 7 -20.82 -0.1253 MIMAT0000549 mmu-miR-322* 72607 Usp13 cacaacgucgcgaAGUACAAa ||||||| ucacucccugggaUCAUGUUa 2 9 873 893 [mm9:3:32833028-32833048:+] 0.5674 140 7 -8.00 -0.2259 MIMAT0000578 mmu-miR-337-3p 72607 Usp13 uccguagUAUAUC-CUCGACUu :|| || ||||||| uuaaagaGUACAGAGAGCUGAg 2 15 687 708 [mm9:3:32832842-32832863:+] 0.5625 149 7 -15.25 -0.2594 MIMAT0000605 mmu-miR-350 72607 Usp13 cuuucacauaCCCGAAACACUu |||:||||||| ugggaauaggGGGUUUUGUGAc 2 13 186 207 [mm9:3:32832341-32832362:+] 0.6374 156 7 -18.69 -0.2124 MIMAT0000650 mmu-miR-17* 72607 Usp13 gauguucacgggagUGACGUCa ||||||| cuuuaaggaugagaACUGCAGa 2 9 1025 1046 [mm9:3:32833180-32833201:+] 0.5604 140 7 -15.54 -0.5936 MIMAT0004660 mmu-miR-19a* 72607 Usp13 caucaCGUUGAUACGUUUUGAu |||:| | ||||||| acuaaGCAGCCUUACAAAACUc 2 18 1823 1844 [mm9:3:32833978-32833999:+] 0.5539 157 7 -12.49 -0.3891 MIMAT0004660 mmu-miR-19a* 72607 Usp13 caucacgUUGAUACGUUUUGAu :|:| | :|||||| aauaaaaGAUUUUAUAAAACUu 2 16 2002 2023 [mm9:3:32834157-32834178:+] 0.5539 135 6 -6.00 -0.3752 MIMAT0000672 mmu-miR-199b* 72607 Usp13 cuuguccAUCAGAUUUGU-GACCc |||| |||||| |||| ucuguuuUAGU-UAAACAUCUGGc 2 17 835 857 [mm9:3:32832990-32833012:+] 0.5321 130 0 -13.24 -0.3587 MIMAT0004667 mmu-miR-199b 72607 Usp13 auUGGUUACACGU-CUGAUG-ACa :| :||| | | |||||| || caGCAGAUGCGGAGGACUACAUGg 2 21 110 133 [mm9:3:32832265-32832288:+] 0.5685 123 0 -15.84 -0.1888 MIMAT0000742 mmu-miR-378* 72607 Usp13 uguguccuggaccucAGUCCUc |||||| uuuaaaaauuauaacUCAGGAa 2 8 633 654 [mm9:3:32832788-32832809:+] 0.5625 120 6 -12.66 -0.1228 MIMAT0004691 mmu-miR-382* 72607 Usp13 uuUUUCACAACAGGCACUUACu |:||| || :||||||| acAGAGUAGAGU-UGUGAAUGu 2 21 1118 1138 [mm9:3:32833273-32833293:+] 0.5120 154 7 -15.62 -0.1155 MIMAT0003409 mmu-miR-467a 72607 Usp13 gcGUA-UAUGUACG--UCCGUGAAu ||| :|:|| | :||||||| ccCAUGGUGCAACCUUGGGCACUUu 2 21 1004 1028 [mm9:3:32833159-32833183:+] 0.5808 150 7 -15.99 -0.1581 MIMAT0002108 mmu-miR-467a-1* 72607 Usp13 cacauccacacACAUACAUAUa || ||||||| uggucaaagauUGCAUGUAUAu 2 12 1971 1992 [mm9:3:32834126-32834147:+] 0.5539 147 7 -8.42 -0.3499 MIMAT0004760 mmu-miR-470* 72607 Usp13 agaagaGUCUUUCCAUGACCAa | |: | ||||||| ccuggaCUGGCAUUUACUGGUg 2 17 367 388 [mm9:3:32832522-32832543:+] 0.5500 144 7 -12.65 -0.2140 MIMAT0004760 mmu-miR-470* 72607 Usp13 agaaGAGUCUUUCCA-UGACCAa :|::|:::||| |||||| cugcUUUGGGGGGGUCACUGGUa 2 19 282 304 [mm9:3:32832437-32832459:+] 0.5500 130 6 -21.08 -0.1079 MIMAT0003167 mmu-miR-540-3p 72607 Usp13 ggUCCUAGCUGGAGACUGGa |||| |: ||||||| acAGGA--GGAGUCUGACCa 2 19 1354 1371 [mm9:3:32833509-32833526:+] 0.5226 147 7 -21.47 -0.1079 MIMAT0003167 mmu-miR-540-3p 72607 Usp13 gguccuagcUGGAGACUGGa | :||||||| cccacaguaAGUUCUGACCu 2 12 406 425 [mm9:3:32832561-32832580:+] 0.5500 143 7 -18.32 -0.2957 MIMAT0004788 mmu-miR-20b* 72607 Usp13 gaucUUCACGAGU-GUGACGUCa ||| | | | ||||||| cuuuAAG-GAUGAGAACUGCAGa 2 19 1025 1046 [mm9:3:32833180-32833201:+] 0.5604 143 7 -15.35 -0.5936 MIMAT0003726 mmu-miR-675-3p 72607 Usp13 ugacucgccaaucccGUAUGUc |||||| uuggcgagaagaagcCAUACAc 2 8 13 34 [mm9:3:32832168-32832189:+] 0.5928 120 6 -10.87 -0.1011 MIMAT0014816 mmu-miR-3099 72607 Usp13 agGGGUUGGAGAG-AGAU-CGGAu :|| |||:|| |||| |||| agUCCUUCCUUUCAUCUAUGCCUc 2 21 1488 1511 [mm9:3:32833643-32833666:+] 0.5226 131 0 -23.85 -0.1214 MIMAT0003740 mmu-miR-674 72607 Usp13 augUGGUGAGGGUAGAG-UCACg ||| || || ||| |||| gcgACC-CUACCCCCUCAAGUGg 2 20 1791 1812 [mm9:3:32833946-32833967:+] 0.5539 121 0 -18.64 -0.1453 MIMAT0003461 mmu-miR-683 72607 Usp13 cuCCUGUGUCGA--AUGUCGUCc | | | ||:| ||||||| agGAAAAAAGUUGGGACAGCAGa 2 20 94 116 [mm9:3:32832249-32832271:+] 0.5685 146 7 -20.04 -0.3311 MIMAT0003470 mmu-miR-691 72607 Usp13 aaaagacggagagaAGUCCUUa ||||||| uuaaaaauuauaacUCAGGAAc 2 9 634 655 [mm9:3:32832789-32832810:+] 0.5625 140 7 -9.31 -0.6242 MIMAT0003476 mmu-miR-669b 72607 Usp13 uguacgUGUACGUGUGUUUUGa :|| | :||||||| cacuaaGCAGCCUUACAAAACu 2 17 1822 1843 [mm9:3:32833977-32833998:+] 0.5539 148 7 -12.94 -0.4394 MIMAT0003476 mmu-miR-669b 72607 Usp13 ugUACGUGU-ACGUGUGUUUUGa |||:|:| | :: ||||||: gcAUGUAUAUUUUGAACAAAAUa 2 21 1983 2005 [mm9:3:32834138-32834160:+] 0.5539 143 0 -14.90 -0.1020 MIMAT0003476 mmu-miR-669b 72607 Usp13 uguACGUGUA-CGUGU-GUUUUGa | ||:|| | ||| |||||| uuuUCCAUAUAGGACAUCAAAACc 2 20 345 368 [mm9:3:32832500-32832523:+] 0.5500 130 6 -13.76 -0.3418 MIMAT0003478 mmu-miR-467b* 72607 Usp13 cacaaccacacACAUACAUAUa || ||||||| uggucaaagauUGCAUGUAUAu 2 12 1971 1992 [mm9:3:32834126-32834147:+] 0.5539 147 7 -9.79 -0.3499 MIMAT0003480 mmu-miR-297b-5p 72607 Usp13 uguacaaguacguguGUAUGUa |||||| uuggcgagaagaagcCAUACAc 2 8 13 34 [mm9:3:32832168-32832189:+] 0.5928 120 6 -8.53 -0.1011 MIMAT0003485 mmu-miR-455* 72607 Usp13 gcuacaUCAGG--UUUCC-GUGUAu ||||| ||:|| ||||| aaacucAGUCCCUAAGGGCCACAUa 2 17 1839 1863 [mm9:3:32833994-32834018:+] 0.5539 127 0 -19.31 -0.4083 MIMAT0003742 mmu-miR-455 72607 Usp13 cacauauacggGCACCUGACg | ||||||| ggacaucaaaaCCUGGACUGg 2 11 356 376 [mm9:3:32832511-32832531:+] 0.5500 142 7 -15.41 -0.1542 MIMAT0003500 mmu-miR-710 72607 Usp13 gaGUUGAGAGGGGUUCU-GAACc | :||: ::::|||| |||| uaCUGCUUCUUUUAAGAGCUUGg 2 21 139 161 [mm9:3:32832294-32832316:+] 0.6518 124 0 -19.45 -0.5332 MIMAT0003508 mmu-miR-501-5p 72607 Usp13 aaagUGGGUCCCUGUUUCCUAa || | ||| ||||||| uugaACAAAUGGA-AAAGGAUu 2 19 1224 1244 [mm9:3:32833379-32833399:+] 0.5573 152 7 -13.83 -0.4864 MIMAT0003508 mmu-miR-501-5p 72607 Usp13 aaaguggguccCUGUUUCCUaa || |||||| aaaaagaaaaaGAAAAAGGAaa 3 12 67 88 [mm9:3:32832222-32832243:+] 0.5390 127 0 -6.67 -0.1753 MIMAT0004838 mmu-miR-742* 72607 Usp13 acuaauCGUUGGUACACUCAu |::| ::||||||| guguguGUGAGUGUGUGAGUg 2 16 504 524 [mm9:3:32832659-32832679:+] 0.5649 151 7 -14.25 -0.2412 MIMAT0004238 mmu-miR-743a 72607 Usp13 agAUGAGUCGAAC-CAC-AGAAAg ||||: |:||| || ||||| cgUACUU-GUUUGAUUGAUCUUUu 2 21 1264 1286 [mm9:3:32833419-32833441:+] 0.5375 125 0 -13.18 -0.7197 MIMAT0004863 mmu-miR-220 72607 Usp13 uuCACAGACUGUGACAC-CACc |||| ||| |||| ||| guGUGUGUGAGUGUGUGAGUGu 2 20 504 525 [mm9:3:32832659-32832680:+] 0.5649 127 0 -16.15 -0.4461 MIMAT0004863 mmu-miR-220 72607 Usp13 uuCACAGAC-UGUG-ACAC-CACc |||| || |::: |||| ||| gaGUGUGUGUAUGUGUGUGUGUGa 2 20 520 543 [mm9:3:32832675-32832698:+] 0.5625 121 0 -19.55 -0.5188 MIMAT0004868 mmu-miR-343 72607 Usp13 agACCCGUGUACUUCC--CUCu ||||||| | |||| ||| cuUGGGCACUUUAAGGAUGAGa 2 19 1017 1038 [mm9:3:32833172-32833193:+] 0.5604 122 0 -23.15 -0.3735 MIMAT0004882 mmu-miR-466f-3p 72607 Usp13 caCACAUACACACACACAUAc ||||:|| |||||||||| gaGUGUGUGAGUGUGUGUAUg 2 20 512 532 [mm9:3:32832667-32832687:+] 0.5649 183 7 -30.89 -0.1652 MIMAT0004887 mmu-miR-467d* 72607 Usp13 cacauccacacACAUACAUAUa || ||||||| uggucaaagauUGCAUGUAUAu 2 12 1971 1992 [mm9:3:32834126-32834147:+] 0.5539 147 7 -8.42 -0.3499 MIMAT0004890 mmu-miR-509-5p 72607 Usp13 uacUAACGGUGUAAGACCUCAu | | ||| |||||||| ucaAAUCCCAGCCUCUGGAGUu 2 20 1188 1209 [mm9:3:32833343-32833364:+] 0.5573 155 7 -17.62 -0.2415 MIMAT0004940 mmu-miR-511 72607 Usp13 acUCACGU-CUCGUUUUCCGUa | ||:| | |||||||| uaAAUGUAUUUGGAAAAGGCAg 2 20 602 623 [mm9:3:32832757-32832778:+] 0.5625 150 7 -13.65 -0.2830 MIMAT0005294 mmu-miR-467e* 72607 Usp13 uauauccacacACAUACAUAUa || ||||||| uggucaaagauUGCAUGUAUAu 2 12 1971 1992 [mm9:3:32834126-32834147:+] 0.5539 147 7 -8.42 -0.3499 MIMAT0005833 mmu-miR-669d 72607 Usp13 ugUAUAUGUACGUGUGUG-UUCa :|: | || | :|||| ||| aaGUGGAAAUUCCUACACUAAGc 2 21 1807 1829 [mm9:3:32833962-32833984:+] 0.5539 120 0 -8.21 -0.3761 MIMAT0005839 mmu-miR-669f 72607 Usp13 uaugcacacacACAUACAUAUAc || |||||||| uggucaaagauUGCAUGUAUAUu 2 13 1971 1993 [mm9:3:32834126-32834148:+] 0.5539 152 7 -6.76 -0.5642 MIMAT0005851 mmu-miR-1193 72607 Usp13 cuaucauuuUGCCCACUGGAu ::| ||||||| uguauguguGUGUGUGACCUu 2 13 527 547 [mm9:3:32832682-32832702:+] 0.5625 144 7 -15.24 -0.5005 MIMAT0005858 mmu-miR-1197 72607 Usp13 ucuUCA-UCUGGUACACAGGAu :|| | :|| ||||||| ccuGGUCAUUUCA-GUGUCCUa 2 19 1083 1103 [mm9:3:32833238-32833258:+] 0.5401 143 7 -16.95 -0.3628 MIMAT0007868 mmu-miR-1903 72607 Usp13 acAGAGUCCUU---C-UUCUUCUUCc || |||||| | :|||||||| ccUCACAGGAAUUGGCGAGAAGAAGc 2 21 2 27 [mm9:3:32832157-32832182:+] 0.6720 162 7 -18.91 -0.6816 MIMAT0007868 mmu-miR-1903 72607 Usp13 acagaGUCCUUCUUCUUCUUCc ||| || | ||||||| aauggCAGAAAAAUGAAGAAGu 2 18 1291 1312 [mm9:3:32833446-32833467:+] 0.5375 161 7 -12.52 -0.7814 MIMAT0007868 mmu-miR-1903 72607 Usp13 acagagUCCUUCUUCUUCUUcc | ||| |||||||| ccaaaaAAGAAAAAGAAGAAaa 3 17 47 68 [mm9:3:32832202-32832223:+] 0.5928 144 0 -9.83 -0.2849 MIMAT0007873 mmu-miR-1896 72607 Usp13 gaggagugggUGGU-AGUCUCUc ||:: ||||||| ggguuuugugACUGUUCAGAGAg 2 13 196 218 [mm9:3:32832351-32832373:+] 0.6374 143 7 -15.78 -0.3002 MIMAT0007874 mmu-miR-1904 72607 Usp13 ggAGGGAGGUC-UCCUCGUCUUg ||::|::|| | :|||||| gaUCUUUUUAGAAAUGGCAGAAa 2 21 1279 1301 [mm9:3:32833434-32833456:+] 0.5375 143 6 -19.20 -0.1051 MIMAT0007880 mmu-miR-1901 72607 Usp13 ccugggGGCCCUCAUGCUCGCc || ||| ||||||| caguggCCAGGA--ACGAGCGc 2 17 1140 1159 [mm9:3:32833295-32833314:+] 0.5120 149 7 -20.47 -0.1200 MIMAT0009407 mmu-miR-1942 72607 Usp13 guuGGUCUACUUCUGUAGACu ::|| | || ||||||| guuUUAG-UUAA-ACAUCUGg 2 19 838 856 [mm9:3:32832993-32833011:+] 0.5321 146 7 -12.30 -0.2428 MIMAT0009419 mmu-miR-669m 72607 Usp13 uauacaaacacACCUACAUAUa || ||||||| uggucaaagauUGCAUGUAUAu 2 12 1971 1992 [mm9:3:32834126-32834147:+] 0.5539 147 7 -7.36 -0.3556 MIMAT0009424 mmu-miR-1953 72607 Usp13 gucUUCG-GACUCUUGAAAGGGu |:|| ||| ||||||| aauAGGCACUG---UCUUUCCCu 2 20 257 276 [mm9:3:32832412-32832431:+] 0.5585 142 7 -18.63 -0.1643 MIMAT0009425 mmu-miR-1954 72607 Usp13 uuGUCCCAGAGUGAGACGUCa | ||| || ||||||| uaCCGGG--ACA-UCUGCAGu 2 20 435 452 [mm9:3:32832590-32832607:+] 0.5500 142 7 -19.00 -0.2635 MIMAT0009428 mmu-miR-1956 72607 Usp13 aggcgaCUG-AG-UCGGGACCUGa ||| || | ||||||| auauagGACAUCAAAACCUGGACu 2 17 351 374 [mm9:3:32832506-32832529:+] 0.5500 146 7 -22.42 -0.5650 MIMAT0009435 mmu-miR-1962 72607 Usp13 uacacaGGGUCACGGUCGGAGa :| | | |||||||| uuuucaUCAAAUCCCAGCCUCu 2 17 1182 1203 [mm9:3:32833337-32833358:+] 0.5573 152 7 -19.08 -0.1347 MIMAT0009436 mmu-miR-1963 72607 Usp13 cuucCGGAGU-ACUAGAG-CAGGGu ||||:| | ||| ||||| agcaGCCUUACAAAACUCAGUCCCu 2 20 1827 1851 [mm9:3:32833982-32834006:+] 0.5539 122 0 -21.03 -0.4403 MIMAT0009441 mmu-miR-1968 72607 Usp13 ucaggugguAGGAAUUGUCGACGu ||: | :||||||| agagauguuUCUGUCGCAGCUGCa 2 16 1044 1067 [mm9:3:32833199-32833222:+] 0.5401 151 7 -18.06 -0.1142 MIMAT0009457 mmu-miR-1839-3p 72607 Usp13 cgacaaCCAUCU--AUUCAUCCAGa |||||| :||||||| acagaaGGUAGAACGUGGUAGGUCc 2 18 1598 1622 [mm9:3:32833753-32833777:+] 0.5089 152 7 -21.65 -0.1299 MIMAT0012773 mmu-miR-767 72607 Usp13 acGAGUCUGUUGGUACCACGu || |:| ||||||||| ugCUGUGGC--CCAUGGUGCa 2 20 996 1014 [mm9:3:32833151-32833169:+] 0.5808 152 7 -25.16 -0.1112 MIMAT0012774 mmu-miR-664 72607 Usp13 auccGACCCCUCAUUUACU-UAu :| |||| ||||||| || uauaUUUGGGAAUAAAUGACAUg 2 19 1663 1685 [mm9:3:32833818-32833840:+] 0.5348 134 0 -13.25 -0.4945 MIMAT0000135 mmu-miR-125a-5p 72607 Usp13 aguguccaauuucccaGAGUCCcu |||||| ucuuuaaaaauuauaaCUCAGGaa 3 9 631 654 [mm9:3:32832786-32832809:+] 0.5625 120 0 -10.17 -0.1042 MIMAT0000136 mmu-miR-125b-5p 72607 Usp13 agUGUUCAAUCCCAGAGUCCcu | || ||| |||||| uuAAAAAUUA-UAACUCAGGaa 3 21 634 654 [mm9:3:32832789-32832809:+] 0.5625 126 0 -10.17 -0.1042 MIMAT0000140 mmu-miR-128 72607 Usp13 uuucUCUGGCCA-AGUGACACu || |: || ||||||| ccuaAGUCUUGUCACACUGUGc 2 18 774 795 [mm9:3:32832929-32832950:+] 0.5439 148 7 -14.22 -0.1393 MIMAT0000144 mmu-miR-132 72607 Usp13 gcugguaCCGACAU-CUGACAAu ||:| |: ||||||| aauagggGGUUUUGUGACUGUUc 2 16 190 212 [mm9:3:32832345-32832367:+] 0.6374 150 7 -14.16 -0.2927 MIMAT0000147 mmu-miR-135a 72607 Usp13 aguguAUCCUUAUUUUUCGGUAu |:| :| ||:||||||| ggaauUGGCGAGAAGAAGCCAUa 2 19 9 31 [mm9:3:32832164-32832186:+] 0.5928 162 7 -16.77 -1.1567 MIMAT0000153 mmu-miR-141 72607 Usp13 gguagaaauggucUGUCACAAu :||||||| caguggcugguuuGCAGUGUUa 2 10 1893 1914 [mm9:3:32834048-32834069:+] 0.5539 141 7 -14.21 -0.2748 MIMAT0000159 mmu-miR-149 72607 Usp13 cccucacuuCUGUGCCU-CGGUCu ||||: || ||||| gugucguuuGACAUUGACGCCAGg 2 15 748 771 [mm9:3:32832903-32832926:+] 0.5571 122 0 -18.71 -0.1880 MIMAT0000208 mmu-miR-10b 72607 Usp13 guGUUUAAGC--CAAGAUGU-CCCAu ||:|| || | ||||| |||| agCAGAUGCGGAGGACUACAUGGGUa 2 22 111 136 [mm9:3:32832266-32832291:+] 0.5685 128 0 -24.97 -0.5005 MIMAT0000211 mmu-miR-182 72607 Usp13 gccacacucAAGAUGGUAACGGUUu ||:|| : ||||||| cauacaccuUUUUAAU-UUGCCAAa 2 17 28 51 [mm9:3:32832183-32832206:+] 0.5928 150 7 -11.88 -1.1184 MIMAT0000223 mmu-miR-193 72607 Usp13 ugaccCUGAAACAUCCGGUCAa |:|||| ||||||| uagcaGGCUUU---GGCCAGUu 2 18 1561 1579 [mm9:3:32833716-32833734:+] 0.5069 149 7 -18.86 -0.1185 MIMAT0000229 mmu-miR-199a-5p 72607 Usp13 cuuguccAUCAGACUUGU-GACCc |||| | |||| |||| ucuguuuUAGU-UAAACAUCUGGc 2 17 835 857 [mm9:3:32832990-32833012:+] 0.5321 122 0 -10.88 -0.3587 MIMAT0000237 mmu-miR-204 72607 Usp13 ucCGUAUCCUACU-GUUUCC-CUu | ||:|| | | :||||| || caGAAUGGGCUCAGUAAAGGAGAg 2 21 1317 1340 [mm9:3:32833472-32833495:+] 0.5375 123 0 -13.81 -0.1584 MIMAT0000247 mmu-miR-143 72607 Usp13 cucGAUGUCACGAA-GUAGAGu :|||: | :|| |||||| uucUUACGUUUUUUACAUCUCu 2 19 932 953 [mm9:3:32833087-32833108:+] 0.5674 126 6 -12.13 -0.5636 MIMAT0000381 mmu-miR-34c 72607 Usp13 cguuagucGAUUGAUGUGACGGa ||: | ||||||| cuuucccuCUGCCCUCACUGCCu 2 16 970 992 [mm9:3:32833125-32833147:+] 0.5741 147 7 -18.64 -0.1207 MIMAT0000382 mmu-miR-34b-5p 72607 Usp13 uguuagucgauuaauGUGACGGa ||||||| cuuucccucugcccuCACUGCCu 2 9 970 992 [mm9:3:32833125-32833147:+] 0.5741 140 7 -16.85 -0.1207 MIMAT0000385 mmu-miR-106a 72607 Usp13 gauggACG-UGACAAUCGUGAAAc ||| || | :||||||| cauggUGCAACCUUGGGCACUUUa 2 19 1006 1029 [mm9:3:32833161-32833184:+] 0.5808 153 7 -13.46 -0.2213 MIMAT0000386 mmu-miR-106b 72607 Usp13 uagACG-UGACAGUCGUGAAAu ||| || | :||||||| uggUGCAACCUUGGGCACUUUa 2 19 1008 1029 [mm9:3:32833163-32833184:+] 0.5808 153 7 -15.63 -0.2213 MIMAT0000519 mmu-miR-200a 72607 Usp13 uguAG-CAAUGGUC---UGUCACAAu || || :|::| :||||||| ccuUCAGUGGCUGGUUUGCAGUGUUa 2 20 1889 1914 [mm9:3:32834044-32834069:+] 0.5539 145 7 -16.13 -0.2748 MIMAT0000528 mmu-miR-18a 72607 Usp13 gauaGACGUGAUCUACGUGGAAu ||| ||| |||||||| augaCUGAACU---UGCACCUUc 2 20 1874 1893 [mm9:3:32834029-32834048:+] 0.5539 155 7 -17.76 -0.2542 MIMAT0000528 mmu-miR-18a 72607 Usp13 gauaGACGUGAUCUACGU-GGAAu || ||||| | ||| |||| auucCUACACUA-A-GCAGCCUUa 2 20 1815 1836 [mm9:3:32833970-32833991:+] 0.5539 123 0 -15.26 -0.4914 MIMAT0000529 mmu-miR-20a 72607 Usp13 gauggACG-UGAUAUUCGUGAAAu ||| || |::||||||| cauggUGCAACCUUGGGCACUUUa 2 19 1006 1029 [mm9:3:32833161-32833184:+] 0.5808 157 7 -18.27 -0.2213 MIMAT0000540 mmu-miR-93 72607 Usp13 gauggACG-UGCUUGUCGUGAAAc ||| || :||||||| cauggUGCAACCUUGGGCACUUUa 2 19 1006 1029 [mm9:3:32833161-32833184:+] 0.5808 145 7 -12.48 -0.2213 MIMAT0000541 mmu-miR-96 72607 Usp13 ucguuuuuacacgaucACGGUUu |||||| auacaccuuuuuaauuUGCCAAa 2 8 29 51 [mm9:3:32832184-32832206:+] 0.5928 120 6 -10.54 -0.1193 MIMAT0000542 mmu-miR-34a 72607 Usp13 uguuggucgauucuGUGACGGu ||||||| uuucccucugcccuCACUGCCu 2 9 971 992 [mm9:3:32833126-32833147:+] 0.5741 140 7 -17.92 -0.1196 MIMAT0000565 mmu-miR-328 72607 Usp13 ugccuucccgucucUCCCGGUc ||||||| aaacucagucccuaAGGGCCAc 2 9 1839 1860 [mm9:3:32833994-32834015:+] 0.5539 140 7 -14.92 -0.3665 MIMAT0004651 mmu-miR-340-5p 72607 Usp13 uuAGUCAGAGUA--ACGAAAUAUu |:| || ||| ||||||| uuUUAAUCACAUCAAACUUUAUAu 2 21 468 491 [mm9:3:32832623-32832646:+] 0.5587 151 7 -10.39 -0.9093 MIMAT0004651 mmu-miR-340-5p 72607 Usp13 uuagucagaguaacGAAAUAUu :|||||| aacaaaauaaaagaUUUUAUAa 2 9 1997 2018 [mm9:3:32834152-32834173:+] 0.5539 124 6 -4.35 -0.2499 MIMAT0000590 mmu-miR-342-3p 72607 Usp13 ugCCCACGC-UAAAGACACACUCu | |||:| :| |||||||| auGAGUGUGUGUGAGUGUGUGAGu 2 22 500 523 [mm9:3:32832655-32832678:+] 0.5649 156 7 -23.34 -0.3128 MIMAT0000609 mmu-miR-351 72607 Usp13 guccgagUUUCCCGAGGAGUCCcu ||| : |||||| ucuuuaaAAAUUAUAACUCAGGaa 3 18 631 654 [mm9:3:32832786-32832809:+] 0.5625 121 0 -10.76 -0.1064 MIMAT0000612 mmu-miR-135b 72607 Usp13 agugUAUCCUUACUU-UUCGGUAu || || : ||| ||||||| aggaAUUGGCGAGAAGAAGCCAUa 2 20 8 31 [mm9:3:32832163-32832186:+] 0.5928 158 7 -17.04 -1.1567 MIMAT0000616 mmu-miR-101b 72607 Usp13 aaGUCGAUAGUGU-CAUG-ACAu | ||| | ||| |||| ||| guCUGCU-UGACACGUACUUGUu 2 20 1252 1273 [mm9:3:32833407-32833428:+] 0.5375 120 0 -15.73 -0.2733 MIMAT0000648 mmu-miR-10a 72607 Usp13 guGUUUAAGCCU--AGAUGU-CCCAu ||:|| |||| ||||| |||| agCAGAUGCGGAGGACUACAUGGGUa 2 22 111 136 [mm9:3:32832266-32832291:+] 0.5685 136 0 -27.90 -0.4970 MIMAT0000649 mmu-miR-17 72607 Usp13 gauggACG-UGACAUUCGUGAAAc ||| || |::||||||| cauggUGCAACCUUGGGCACUUUa 2 19 1006 1029 [mm9:3:32833161-32833184:+] 0.5808 157 7 -15.09 -0.2213 MIMAT0000659 mmu-miR-212 72607 Usp13 accggCACUGACCUCUGACAAu | | :| | ||||||| auaggGGGUUUUGUGACUGUUc 2 18 191 212 [mm9:3:32832346-32832367:+] 0.6374 149 7 -14.61 -0.2953 MIMAT0000739 mmu-miR-375 72607 Usp13 agugcgcucggcuuGCUUGUUu :|||||| uugcauguauauuuUGAACAAa 2 9 1981 2002 [mm9:3:32834136-32834157:+] 0.5539 124 6 -13.42 -0.3063 MIMAT0000741 mmu-miR-377 72607 Usp13 uguuuuCA-ACGGAAACACACUa || ||: | ||||||| guguguGUAUGUGUGUGUGUGAc 2 17 522 544 [mm9:3:32832677-32832699:+] 0.5625 151 7 -11.40 -0.2074 MIMAT0000741 mmu-miR-377 72607 Usp13 uguuuuCA-ACGGAAACACACUa || || | ||||||| uacacuGUAUGAGUGUGUGUGAg 2 17 492 514 [mm9:3:32832647-32832669:+] 0.5673 147 7 -12.82 -0.2310 MIMAT0001542 mmu-miR-449a 72607 Usp13 uggucgauuguuauGUGACGGu ||||||| uuucccucugcccuCACUGCCu 2 9 971 992 [mm9:3:32833126-32833147:+] 0.5741 140 7 -17.26 -0.1196 MIMAT0003128 mmu-miR-485 72607 Usp13 cuuAAGUAG-UGCCGGUCGGAGa |||||| | |||||||| cuuUUCAUCAAAUCCCAGCCUCu 2 20 1181 1203 [mm9:3:32833336-32833358:+] 0.5573 162 7 -26.28 -0.1295 MIMAT0003187 mmu-miR-20b 72607 Usp13 gauggACG-UGAUACUCGUGAAAc ||| || ||:||||||| cauggUGCAACCUUGGGCACUUUa 2 19 1006 1029 [mm9:3:32833161-32833184:+] 0.5808 161 7 -18.14 -0.2213 MIMAT0003730 mmu-miR-592 72607 Usp13 ugUAGUAGCGUAUA-ACUGU-GUUa ||: |: ||||| |||| ||| aaAUUUUUCCAUAUAGGACAUCAAa 2 22 341 365 [mm9:3:32832496-32832520:+] 0.5500 128 0 -10.58 -0.3917 MIMAT0003450 mmu-miR-488 72607 Usp13 cuGGUUCUUUGUC-----GGAAAGUu |:|:|:: ||| ||||||| ggCUAGGGGCCAGUCCUUCCUUUCAu 2 20 1477 1502 [mm9:3:32833632-32833657:+] 0.5226 146 7 -21.09 -0.2732 MIMAT0003460 mmu-miR-449c 72607 Usp13 ggucGAUCGUUACGUGACGGa || || | ||||||| cccuCU-GCCCU-CACUGCCu 2 18 974 992 [mm9:3:32833129-32833147:+] 0.5741 141 7 -18.64 -0.1107 MIMAT0003486 mmu-miR-491 72607 Usp13 ggAGUACCUUCCCAAGGGGUGa |:| | | ||||||||| ugUUAAAAAUGAGUUCCCCACu 2 21 659 680 [mm9:3:32832814-32832835:+] 0.5625 156 7 -20.96 -0.7058 MIMAT0004858 mmu-miR-18b 72607 Usp13 gaUUGUCGUGAUCUACGUGGAAu :|| | ||| |||||||| auGACUGAACU---UGCACCUUc 2 22 1874 1893 [mm9:3:32834029-32834048:+] 0.5539 153 7 -16.50 -0.2542 MIMAT0004859 mmu-miR-193b 72607 Usp13 ucgccCUGAAACACCCGGUCAa |:|||| ||||||| uagcaGGCUUU---GGCCAGUu 2 18 1561 1579 [mm9:3:32833716-32833734:+] 0.5069 149 7 -21.44 -0.1185 MIMAT0004869 mmu-miR-421 72607 Usp13 cgCGGGUUAAUUACAGAC-AACUa | :: |||: |||||| |||| agGAUUUAUUGCUGUCUGCUUGAc 2 22 1239 1262 [mm9:3:32833394-32833417:+] 0.5474 133 0 -13.50 -0.2995 MIMAT0004896 mmu-miR-590-3p 72607 Usp13 ugauCGAAUAUGUAUUUUAAu || | : ||||||| aaauGCCCACUUUUAAAAUUu 2 18 326 346 [mm9:3:32832481-32832501:+] 0.5500 141 7 -3.74 -0.5351 MIMAT0004896 mmu-miR-590-3p 72607 Usp13 ugaucgaauauguaUUUUAAu |||||| ggcaaacaucuuuaAAAAUUa 2 8 623 643 [mm9:3:32832778-32832798:+] 0.5625 120 6 -3.91 -0.1032 MIMAT0005447 mmu-miR-449b 72607 Usp13 cggucGAUUGUUGUGACGGa ||: | ||||||| ucccuCUGCCCUCACUGCCu 2 16 973 992 [mm9:3:32833128-32833147:+] 0.5741 147 7 -21.53 -0.1207 MIMAT0004941 mmu-miR-544 72607 Usp13 cucGAACGAUUUUUA-CGUCUUa ||| :||:|||| |||||| gauCUUUUUAGAAAUGGCAGAAa 2 20 1279 1301 [mm9:3:32833434-32833456:+] 0.5375 143 6 -16.05 -1.0676

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G067962 Usp13 Mus musculus 72607

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Usp13 mmu-miR-501-5p beg:1225 end:1245 pic:3' AAAGTGGGTCCCTGTTTCCTAA 5'& || | ||| |||||||| &5' ----ACAAATGGA-AAAGGATT 3' Usp13 mmu-miR-129-3p beg:298 end:312 pic:3' TACGAAAAACCCCATTCCCGAA 5'& ||||||||||| &5' -----------GGTAAGGGCTT 3' Usp13 mmu-miR-669b beg:1825 end:1844 pic:3' TGTACGTGTACGT-GTGTTTTGA 5'& ||| || .|||||||| &5' ----GCA---GCCTTACAAAACT 3' Usp13 mmu-miR-1942 beg:433 end:449 pic:3' GTTGGTCTACTTCTGTAGACT 5'& |||.| |||||||| &5' --ACCGG-----GACATCTG- 3' Usp13 mmu-miR-1901 beg:1141 end:1159 pic:3' CCTGGGGGCCCTCATGCTCGCC 5'& |.|| ||| ||||||| &5' -GGCCA---GGA--ACGAGCG- 3' Usp13 mmu-miR-328 beg:1841 end:1860 pic:3' TGCCTTCCCGTCTC----TCCCGGTC 5'& ||| ||||||| &5' ---------CAGTCCCTAAGGGCCA- 3' Usp13 mmu-miR-19astar beg:1825 end:1844 pic:3' CATCACGTTGATACGTTTTGAT 5'& |||.| | ||||||| &5' -----GCAGCCTTACAAAACT- 3' Usp13 mmu-miR-34b-5p beg:974 end:993 pic:3' TGTTAGTCGATTAATGTGACGGA 5'& || || |||||||| &5' ----TCTGCCCT---CACTGCCT 3' Usp13 mmu-miR-34c beg:974 end:993 pic:3' CGTTAGTCGATTGATGTGACGGA 5'& || || || |||||||| &5' ----TCTGCC--CT-CACTGCCT 3' Usp13 mmu-miR-128 beg:776 end:795 pic:3' TTTCTCTGGCCAA-GTGACACT 5'& || |. || ||||||| &5' ----AGTCTTGTCACACTGTG- 3' Usp13 mmu-miR-412 beg:1526 end:1542 pic:3' GCCGATCACCTGGTCCACTT 5'& .|||| .||||||| &5' -----GGTGG-TCAGGTGA- 3' Usp13 mmu-miR-141 beg:1895 end:1915 pic:3' GGTAGAAATGGTC---TGTCACAAT 5'& .| | .|||||||| &5' --------GCTGGTTTGCAGTGTTA 3' Usp13 mmu-miR-1962 beg:1052 end:1079 pic:3' TACACAGGGTC------ACGGTCGGAGA 5'& |||| ||| |||||||||. &5' ---TGTCGCAGCTGCAATGCCAGCCTT- 3' Usp13 mmu-miR-1962 beg:1182 end:1204 pic:3' TACACAG-GGTCAC-GGTCGGAGA 5'& || .|| ||||||||| &5' -----TCATCAAATCCCAGCCTCT 3' Usp13 mmu-miR-145star beg:1134 end:1153 pic:3' GTTCTTGTCATAAAGGTCCTTA 5'& | .||||. ||||||| &5' ---GTGCAGTGG--CCAGGAA- 3' Usp13 mmu-miR-327 beg:1793 end:1811 pic:3' TAGGAGTACGGGGAGTTCA 5'& ||| |||||||||| &5' --CCTAC--CCCCTCAAGT 3' Usp13 mmu-miR-509-5p beg:1195 end:1209 pic:3' TACTAACGGTGTAAGACCTCAT 5'& ||| |||||||| &5' ------GCC----TCTGGAGT- 3' Usp13 mmu-miR-1953 beg:257 end:276 pic:3' GTCTTCG-GACTCTTGAAAGGGT 5'& |.|| ||| ||||||| &5' ---AGGCACTGT---CTTTCCC- 3' Usp13 mmu-miR-1953 beg:959 end:977 pic:3' GTCTTCGGACTCTTGAAAGGGT 5'& |..||| |.||||||| &5' --GGGGCC----AGCTTTCCC- 3' Usp13 mmu-miR-22star beg:1570 end:1587 pic:3' ATTTCGAACGGT---GACTTCTTGA 5'& |||| ||||||||| &5' --------GCCAGTTCTGAAGAAC- 3' Usp13 mmu-miR-375 beg:1210 end:1233 pic:3' AGTGCGCTCGG-CTT---GCTTGTTT 5'& | || || .||||||| &5' ------GGTCCAGATCATTGAACAAA 3' Usp13 mmu-miR-1903 beg:1291 end:1312 pic:3' ACAGAGTCCTTCTT----CTTCTTCC 5'& || |||| ||||||| &5' -------GGCAGAAAAATGAAGAAG- 3' Usp13 mmu-miR-135a beg:1662 end:1686 pic:3' AGTGTATCCTTATTTTTCGGTAT 5'& .|. |.|||||||| |||. &5' -TATTTGGGAATAAATGA-CATG 3' Usp13 mmu-miR-375 beg:1981 end:2003 pic:3' AGTGCGCTCGGCTTGCTTGTTT 5'& ||.|. .||||||| &5' -CATGTATATTT--TGAACAAA 3' Usp13 mmu-miR-1903 beg:1 end:27 pic:3' ACAGAGTCCT---TC-TTCTTCTTCC 5'& || ||||| .| .|||||||| &5' --TCACAGGAATTGGCGAGAAGAAG- 3' Usp13 mmu-miR-135a beg:2 end:32 pic:3' AGTGTATCCTTA-------TTTTTCGGTAT 5'& |||| |||||| ||.|||||||| &5' TCAC--AGGAATTGGCGAGAAGAAGCCATA 3' Usp13 mmu-miR-132 beg:194 end:212 pic:3' GCTGGTACCG--ACATCTGACAAT 5'& ||. ||| ||||||| &5' -------GGTTTTGT-GACTGTT- 3' Usp13 mmu-miR-337-3p beg:691 end:709 pic:3' TCCGTAGTATATC-CTCGACTT 5'& .|| || |||||||. &5' -------GTACAGAGAGCTGAG 3' Usp13 mmu-miR-18a beg:1875 end:1893 pic:3' GATAGACGTGATCTACGTGGAAT 5'& ||| ||| |||||||| &5' ----CTGAACT---TGCACCTT- 3' Usp13 mmu-miR-324-3p beg:1119 end:1146 pic:3' TCGTCGT-GGACC--C-CGTCACC 5'& ||.|| . || | ||||||| &5' AGTAGAGTTGTGAATGTGCAGTGG 3' Usp13 mmu-miR-324-3p beg:429 end:455 pic:3' TCGTCGTGGACCC------CGTCACC 5'& |. |.||| ||| ||||||| &5' -GT-GTACC-GGGACATCTGCAGTGG 3' Usp13 mmu-miR-141star beg:1392 end:1411 pic:3' AGGTTGTGACGTGACCTTCTAC 5'& || || || ||||||| &5' -CCTGT-CT-CAA-GGAAGAT- 3' Usp13 mmu-miR-292-3p beg:1011 end:1029 pic:3' TGTGAGTTTTGGACCGCCGTGAAA 5'& ||||| | |||||||| &5' --------AACCTTG-GGCACTTT 3' Usp13 mmu-miR-193 beg:1474 end:1491 pic:3' TGACCCTGAAACATCCGGTCAA 5'& |.|| .||||||| &5' -----GGCTAG--GGGCCAGT- 3' Usp13 mmu-miR-296-5p beg:1386 end:1397 pic:3' TGTCCTAACTCCCCCCCGGGA 5'& |||||||| &5' -------------GGGGCCCT 3' Usp13 mmu-miR-501-3p beg:1444 end:1459 pic:3' GTTTAGGAACGGGCCCACGTAA 5'& |||.|||||||| &5' ---------GCCTGGGTGCAT- 3' Usp13 mmu-miR-1839-3p beg:1603 end:1622 pic:3' CGACAACCATCTAT--TCATCCAGA 5'& |||||| .||||||| &5' ------GGTAGAACGTGGTAGGTC- 3' Usp13 mmu-miR-1193 beg:529 end:547 pic:3' CTATCATTTTGCCCACTGGAT 5'& ||. .| ||||||| &5' ----GTGTG-TGTGTGACCT- 3' Usp13 mmu-miR-342-3p beg:503 end:523 pic:3' TGCCCACGCTAAAGACACACTCT 5'& | |||.|| |||||||| &5' --GTGTGTGAG---TGTGTGAG- 3' Usp13 mmu-miR-466i beg:521 end:543 pic:3' ATCACACATACACACACACATA 5'& ||||||||||||||||||. &5' --GTGTGTATGTGTGTGTGTG- 3' Usp13 mcmv-miR-m108-2-3p beg:1630 end:1652 pic:3' TGGCCAGTGA--GCAGAGCTCAGTG 5'& .||| | |||.||||.|. &5' ------TACTGCCTTCTTGAGTTAT 3' Usp13 mcmv-miR-m108-2-5p.1 beg:1880 end:1902 pic:3' GCCACGAGCGC---AGCTCACTGGCG 5'& ||.|| || ||||.|.| &5' -----CTTGCACCTTC-AGTGGCTG- 3' Usp13 mcmv-miR-M44-1 beg:1230 end:1244 pic:3' TGGCGCCGAGACCTTTTTCTAT 5'& |||||||.||| &5' ----------TGGAAAAGGAT- 3' Usp13 mghv-miR-M1-8 beg:1437 end:1457 pic:3' CTGGTTTGGGGGTCACTCACGA 5'& |.|.|.| || ||.|||| &5' GGCTAGAGGCC---TGGGTGC- 3' Usp13 mghv-miR-M1-8 beg:507 end:518 pic:3' CTGGTTTGGGGGTCACTCACGA 5'& |||||||. &5' -------------GTGAGTGT- 3' Usp13 mghv-miR-M1-9 beg:1952 end:1974 pic:3' TTTTTCCAGGTCC--GTTTACACT 5'& .|||| . ||||||||. &5' ---GAGGTTTGAATTCAAATGTGG 3' Usp13 mmu-let-7a beg:1498 end:1513 pic:3' TTGATATGTTGGATGATGGAGT 5'& |.||| |.||||| &5' ---------ATCTA-TGCCTCA 3' Usp13 mmu-let-7a beg:124 end:148 pic:3' TTGATATGT---TGGATGATGGAGT 5'& |||| |. ||.||||.|.|| &5' -ACTACATGGGTACTTACTGCTTC- 3' Usp13 mmu-let-7b beg:1492 end:1513 pic:3' TTGGTGTGTTGGATGATGGAGT 5'& || | |.||| |.||||| &5' --CCTTTC-ATCTA-TGCCTCA 3' Usp13 mmu-let-7c beg:1492 end:1513 pic:3' TTGGTATGTTGGATGATGGAGT 5'& || | |.||| |.||||| &5' --CCTTTC-ATCTA-TGCCTCA 3' Usp13 mmu-let-7c beg:1783 end:1808 pic:3' TTGGTATGTT-GGATGATGGAGT 5'& .|||| .|.| ||||| ||||| &5' GACCA-GCGACCCTACCCCCTCA 3' Usp13 mmu-let-7f beg:1498 end:1513 pic:3' TTGATATGTTAGATGATGGAGT 5'& ||||| |.||||| &5' ---------ATCTA-TGCCTCA 3' Usp13 mmu-let-7g beg:1497 end:1513 pic:3' TTGACATGTTTGATGATGGAGT 5'& || ||| |.||||| &5' -------CAT-CTA-TGCCTCA 3' Usp13 mmu-miR-101a beg:1692 end:1712 pic:3' AAGTCAATAGTGTCATGACAT 5'& .|| |||. |.||||| &5' --TAGC--TCATGATGCTGTA 3' Usp13 mmu-miR-101b beg:1692 end:1712 pic:3' AAGTCGATAGTGTCATGACAT 5'& .||| |||. |.||||| &5' --TAGC--TCATGATGCTGTA 3' Usp13 mmu-miR-101b beg:704 end:729 pic:3' AAGTCGATAGTG-----TCATGACAT 5'& | ||.|.| .| |||.|||| &5' -TGAGTTGTGGCCTCTAAGTGCTGT- 3' Usp13 mmu-miR-103 beg:1691 end:1711 pic:3' AGTATCGGGACATGTTACGACGA 5'& |||||.| | ||||||. &5' --ATAGCTC---ATGATGCTGT- 3' Usp13 mmu-miR-106a beg:1008 end:1029 pic:3' GATGGACGTGACAA-TCGTGAAAC 5'& |||| .||||||| &5' -----TGCAACCTTGGGCACTTT- 3' Usp13 mmu-miR-106b beg:1008 end:1030 pic:3' TAGACGTGAC-AGTCGTGAAAT 5'& |||| | .|||||||| &5' ---TGCAACCTTGGGCACTTTA 3' Usp13 mmu-miR-107 beg:1690 end:1711 pic:3' ACTATCGGGACATGTTACGACGA 5'& ||||||.| | ||||||. &5' -GATAGCTC---ATGATGCTGT- 3' Usp13 mmu-miR-107 beg:1449 end:1470 pic:3' ACTATCG-GGACATGTTACGACGA 5'& |.| || .||| .|||||. &5' -GGT-GCATCTGG---GTGCTGT- 3' Usp13 mmu-miR-1188 beg:771 end:792 pic:3' AGGACCGGGTTGG----AGTGTGGT 5'& |||.|| . ||||||. &5' -----GCCTAAGTCTTGTCACACT- 3' Usp13 mmu-miR-1190 beg:1458 end:1479 pic:3' CTGTCTCCC-CTT-GGAGTCGACT 5'& ||| | .|||||.||. &5' ------GGGTGCTGTCTCAGTTGG 3' Usp13 mmu-miR-1193 beg:408 end:427 pic:3' CTATCATTTTGCCCACTGGAT 5'& |||||. ||||||| &5' ---AGTAAGTTC--TGACCTA 3' Usp13 mmu-miR-1196 beg:1331 end:1351 pic:3' TCCGTCTCCGTCCATCTAAA 5'& ||| ||||||| |.|.|| &5' AGG-AGAGGCAT-TGGGTT- 3' Usp13 mmu-miR-1197 beg:1083 end:1104 pic:3' TCTTCATCTGGTA----CACAGGAT 5'& | ||| |||||||| &5' -------GGTCATTTCAGTGTCCTA 3' Usp13 mmu-miR-1197 beg:382 end:401 pic:3' TCTTCATCTGGTACACAGGAT 5'& .||.| | ||||||.| &5' ---GGTGG-CATTGTGTCTT- 3' Usp13 mmu-miR-124 beg:1645 end:1662 pic:3' CCGTAAGTGGCGCACGGAAT 5'& |.|.| ||||.|| &5' -----TTATCCAGTGCTTT- 3' Usp13 mmu-miR-125a-3p beg:1574 end:1595 pic:3' CCGAGGGTTCTTGG-AGTGGACA 5'& |.||. ||||||| |||| &5' -GTTCTGAAGAACCTTCAC---- 3' Usp13 mmu-miR-130bstar beg:200 end:224 pic:3' TCATCAC-GTT--GTCCCTTTCTCA 5'& ||| | ||| ||.||.|| &5' ----GTGACTGTTCAGAGAGAGGGT 3' Usp13 mmu-miR-132 beg:582 end:604 pic:3' GCTGGTACCGAC--ATC--TGACAAT 5'& |||| ||| .|||||| &5' -------GGCTAAATAGTTGCTGTTA 3' Usp13 mmu-miR-135a beg:347 end:369 pic:3' AGTGTATCCT-TATTTTTCGGTAT 5'& ||.|||||| || |||| || &5' -CATATAGGACATCAAAA-CC--- 3' Usp13 mmu-miR-135astar beg:1149 end:1168 pic:3' GCGGTGC-CGAGGTTAGGGATAT 5'& ||| || ||.||.|. &5' ----ACGAGCGC---TCTCTGTG 3' Usp13 mmu-miR-135b beg:11 end:32 pic:3' AGTGTATCCTTACTTTTCGGTAT 5'& |.| .| |.|||||||| &5' -----TGGCGAGAAGAAGCCATA 3' Usp13 mmu-miR-136 beg:1585 end:1609 pic:3' GGTAGTAGTTTTGTTTACC-TCA 5'& || ||| ||.||||.| || || &5' CCTTCA-CAGAACAGAAGGTAG- 3' Usp13 mmu-miR-138star beg:1125 end:1148 pic:3' GGGACCACAACACT------TCATCGGC 5'& ||||||| |||.||| &5' -------GTTGTGAATGTGCAGTGGCC- 3' Usp13 mmu-miR-141star beg:1677 end:1694 pic:3' AGGTTGTGACGTGACCTTCTAC 5'& .|||. |||.||| &5' ---GACATGATG--GGAGGAT- 3' Usp13 mmu-miR-143 beg:1933 end:1952 pic:3' CTCGATGTCACGAAGTAGAGT 5'& .| || .| ||||||| &5' -GGGTAGGGG----CATCTCA 3' Usp13 mmu-miR-143 beg:385 end:407 pic:3' CTCGATGTCAC-GAAGTAGAGT 5'& .|| |. ||| ||||||.|| &5' -GGC-ATTGTGTCTTCATTTC- 3' Usp13 mmu-miR-145 beg:797 end:814 pic:3' TCCCTAAGGACCCTTTTGACCTG 5'& || |||. |.||||. &5' -------CCCGGGGCAGCTGGG- 3' Usp13 mmu-miR-145 beg:169 end:190 pic:3' TCCCTAAGGACC-C-TTTTGACCTG 5'& |.|||| | |.||||||. &5' ------TTCTGGAGAAGAACTGGG- 3' Usp13 mmu-miR-146b beg:1194 end:1218 pic:3' TCGGATACCTTAAG--TCAAGAGT 5'& ||||| ||||.||. .|| | &5' AGCCTCTGGAGTTTCTGGTCC--- 3' Usp13 mmu-miR-150star beg:1094 end:1122 pic:3' GATAGGG--GGT-CCGGACATG-GTC 5'& |.|||. ||. |||||| ||| &5' -TGTCCTAGCCGTGGCCTGAGAACAG 3' Usp13 mmu-miR-151-5p beg:1627 end:1647 pic:3' TGATCTGACACT-C-GAGGAGCT 5'& || ||| | ||.||.|| &5' ----GAGTGTACTGCCTTCTTGA 3' Usp13 mmu-miR-15astar beg:1099 end:1115 pic:3' ACTCCGTCGTGTCATACCGGAC 5'& .||| | .||||||| &5' -----TAGC-C---GTGGCCTG 3' Usp13 mmu-miR-15astar beg:696 end:718 pic:3' ACTCCGTCGTGTC-ATACCGGAC 5'& ||| ||| || |.|||||| &5' -GAG--AGCTGAGTTGTGGCCT- 3' Usp13 mmu-miR-17 beg:1008 end:1029 pic:3' GATGGACGTGAC-ATTCGTGAAAC 5'& |||| |..||||||| &5' -----TGCAACCTTGGGCACTTT- 3' Usp13 mmu-miR-17star beg:1025 end:1046 pic:3' GATGTTCACGGGAGTGACGTCA 5'& .||| ||||||| &5' ---TAAGGATGAGAACTGCAG- 3' Usp13 mmu-miR-17star beg:976 end:991 pic:3' GATGTTCACGGGAGTGACGTCA 5'& |||||||||||| &5' -------TGCCCTCACTGC--- 3' Usp13 mmu-miR-181a beg:510 end:526 pic:3' TGAGTGGCTGTCGCA-ACTTACAA 5'& ||.|| |||.||| &5' ----------AGTGTGTGAGTGT- 3' Usp13 mmu-miR-181a beg:1116 end:1139 pic:3' TGAGTGGC-TGTCGCAACTTACAA 5'& || | | ||. ||||||| &5' ---CAGAGTAGAGTTGTGAATGT- 3' Usp13 mmu-miR-181a beg:498 end:518 pic:3' TGAGTGGCTGTCGCA-ACTTACAA 5'& .|| |.|| |||.||| &5' ------TGAGTGTGTGTGAGTGT- 3' Usp13 mmu-miR-181b beg:1120 end:1139 pic:3' TGGGTGGC-TGTCGTTACTTACAA 5'& | | ||. .||||||| &5' -------GTAGAGTTGTGAATGT- 3' Usp13 mmu-miR-181c beg:1118 end:1139 pic:3' TGAGTGGCT-GTC-CA--ACTTACAA 5'& || .|| || ||||||| &5' -------GAGTAGAGTTGTGAATGT- 3' Usp13 mmu-miR-181d beg:1118 end:1139 pic:3' TGGGTGGC-TGTTGTTACTTACAA 5'& || | | |. .||||||| &5' ---CAGAGTAGAGTTGTGAATGT- 3' Usp13 mmu-miR-181d beg:491 end:518 pic:3' TGGGTGGC-TGTTGT----TACTTACAA 5'& |||.| | | .|||.||| &5' ---CACTGTATGAGTGTGTGTGAGTGT- 3' Usp13 mmu-miR-182 beg:34 end:52 pic:3' GCCACACTCAAGATGGTAACGGTTT 5'& ||.|| |||||||| &5' ---------TTTTAAT-TTGCCAAA 3' Usp13 mmu-miR-188-3p beg:1413 end:1434 pic:3' ACGTTTGGGA-CGTACACCCTC 5'& ||.||.||. || ||||||. &5' TGTAAGCCTGGGC-TGTGGGG- 3' Usp13 mmu-miR-1894-3p beg:262 end:286 pic:3' GAGGGAAGTGGGAGAGGGAACG 5'& || .|||. |||||||. ||| &5' CTGTCTTT-CCCTCTCTTCTGC 3' Usp13 mmu-miR-1896 beg:1036 end:1049 pic:3' GAGGAGTGGGTGGTAGTCTCTC 5'& ||.. |||||| &5' ----------ACTG-CAGAGA- 3' Usp13 mmu-miR-1896 beg:201 end:219 pic:3' GAGGAGTGGGTGGT-AGTCTCTC 5'& . ||.. |||||||| &5' --------TGACTGTTCAGAGAG 3' Usp13 mmu-miR-1897-5p beg:270 end:293 pic:3' GGGGGAGAAAGAGGTAGGTTTC 5'& |||.||| |||| | |. ..| &5' CCCTCTC-TTCTGC-TTTGGGG 3' Usp13 mmu-miR-18b beg:1872 end:1893 pic:3' GATTGTCGTGATCTACGTGGAAT 5'& |.|| ||| |||||||| &5' -TGACTGAACT---TGCACCTT- 3' Usp13 mmu-miR-1902 beg:1871 end:1893 pic:3' TTCAGTAC-GGA-TG-ACGTGGAGA 5'& ||| |. || |||||||. &5' -----ATGACTGAACTTGCACCTT- 3' Usp13 mmu-miR-1904 beg:1585 end:1612 pic:3' GGAGGGAG---GTCTCCTCGTCTTG 5'& |||.| |||| .|.||||| &5' CCTTCACAGAACAGAA-GGTAGAAC 3' Usp13 mmu-miR-1906 beg:984 end:1002 pic:3' TCGGGACGGAGTCCGACGACGT 5'& |||||| ||||||. &5' ----CTGCCTAT--CTGCTGT- 3' Usp13 mmu-miR-1929 beg:831 end:857 pic:3' GAGACGAGAT--ATTTCAGGATCTT 5'& |||||.|.|| |||| .||.| &5' CTCTGTTTTAGTTAAACATCTGG-- 3' Usp13 mmu-miR-1929 beg:1764 end:1788 pic:3' GAGACGAGATATTTCAGGATCTT 5'& ||||||| |.|. |||| || &5' CTCTGCTGTGTGT-GTCCCTGA- 3' Usp13 mmu-miR-193 beg:1563 end:1580 pic:3' TGACCCTGAAACATCCGGTCAA 5'& |.|||| |||||||| &5' -----GGCTTT---GGCCAGTT 3' Usp13 mmu-miR-1933-3p beg:371 end:395 pic:3' TATCAGTG--TGACTACCAGGACC 5'& |.| ||. ||||.||| .|| &5' -TGG-CATTTACTGGTGGCATTG- 3' Usp13 mmu-miR-1935 beg:962 end:983 pic:3' TCTCTAGGCGGTCG-----GAGACGGA 5'& |||||| ||||||| &5' --------GCCAGCTTTCCCTCTGCC- 3' Usp13 mmu-miR-1938 beg:1067 end:1085 pic:3' CTGGCTTGATGTTCAGGGTGGC 5'& .|| |.| ||||||| &5' -GCC-AGCCT----TCCCACC- 3' Usp13 mmu-miR-193b beg:1470 end:1491 pic:3' TCGCCCTGAAACACCCGGTCAA 5'& ||. || || |||||||| &5' AGTTGG-CTAG--GGGCCAGT- 3' Usp13 mmu-miR-193b beg:1559 end:1580 pic:3' TCGCCCTGAAACACCCGGTCAA 5'& ||| || |||| |||||||| &5' AGCAGG-CTTT---GGCCAGTT 3' Usp13 mmu-miR-1942 beg:1507 end:1526 pic:3' GTTGGTCTACTTCTGTAGACT 5'& .||| .|||||| &5' ---TCAGTTTCC-GCATCTG- 3' Usp13 mmu-miR-1948 beg:1245 end:1262 pic:3' GACATGCTCACG--AGACGGATTT 5'& ||| |||||.|.| &5' ---------TGCTGTCTGCTTGA- 3' Usp13 mmu-miR-1952 beg:209 end:230 pic:3' GTCTTCCTCCCACC-TCT 5'& ||||. ||||||| .|| &5' CAGAGAGAGGGTGATGGA 3' Usp13 mmu-miR-1953 beg:393 end:410 pic:3' GTCTTCGGACTCTTGAAAGGGT 5'& |.|| ||||||| &5' -----GTCTTCA---TTTCCCA 3' Usp13 mmu-miR-1954 beg:535 end:553 pic:3' TTGTCCCAGAGT-GAGACGTCA 5'& || | | ||.||.||| &5' ------GTGTGACCTTTGTAGT 3' Usp13 mmu-miR-195 beg:905 end:928 pic:3' CGGTTATAAAGACACGACGAT 5'& |.| .| |||||| |. ||. &5' GTCTGTTTTTCTG-GTCTCTG 3' Usp13 mmu-miR-1954 beg:433 end:453 pic:3' TTGTCCCAGAGTGAGACGTCA 5'& || ||| || |||||||| &5' -ACCGGGA--CA-TCTGCAGT 3' Usp13 mmu-miR-1955 beg:867 end:887 pic:3' TTTTCGACGTCACGTAGGACCCTGA 5'& ||| | |||||||. &5' ------TGCTCA-CTCCCTGGGAT- 3' Usp13 mmu-miR-1956 beg:354 end:375 pic:3' AGGCGACTG-AGTCG-GGACCTGA 5'& ||| ||| |||||||| &5' ------GACATCAAAACCTGGACT 3' Usp13 mmu-miR-1961 beg:1630 end:1642 pic:3' AAGATTGATGATGGAGT 5'& ||||.|||. &5' -------TACTGCCTT- 3' Usp13 mmu-miR-1961 beg:1495 end:1513 pic:3' AAGATTGATGATGGAGT 5'& ||| ||| |.||||| &5' TTCAT-CTA-TGCCTCA 3' Usp13 mmu-miR-196a beg:978 end:994 pic:3' GGGTTGTTGTACTTTGATGGAT 5'& ||| |||.|||| &5' CCCTC---------ACTGCCTA 3' Usp13 mmu-miR-196b beg:1623 end:1641 pic:3' GGGTTGTTGTC-CTT-TGATGGAT 5'& .|| | |||.||| &5' --------TAGAGTGTACTGCCT- 3' Usp13 mmu-miR-196b beg:971 end:994 pic:3' GGGTTGTTGTCCTTTGATGGAT 5'& ||| .| |||.|||| &5' CCCTCT-GCCCTC-ACTGCCTA 3' Usp13 mmu-miR-1970 beg:1523 end:1545 pic:3' GTTTCGGATAGGGGTCACTGTGT 5'& || .|. .|| .||||||| &5' CACGGTG-GTCA--GGTGACAC- 3' Usp13 mmu-miR-1971 beg:956 end:977 pic:3' AGAGTCGGGTCGGAAATG 5'& ||| .| |||||.|| | &5' TCTGGGGCCAGCTTTCCC 3' Usp13 mmu-miR-199a-5p beg:224 end:244 pic:3' CTTGTCCATCAGACTTGTGACCC 5'& || || .|||.||| &5' -----GGAAGAAAAGACATTGG- 3' Usp13 mmu-miR-199bstar beg:224 end:244 pic:3' CTTGTCCATCAGATTTGTGACCC 5'& || || |.|||.||| &5' -----GGAAGAAAAGACATTGG- 3' Usp13 mmu-miR-200a beg:1892 end:1915 pic:3' TGTAGCAATGGTC---TGTCACAAT 5'& || .| | .|||||||| &5' -----GTGGCTGGTTTGCAGTGTTA 3' Usp13 mmu-miR-200b beg:1895 end:1915 pic:3' AGTAGTAATGGTC---CGTCATAAT 5'& .| | |||||.||| &5' --------GCTGGTTTGCAGTGTTA 3' Usp13 mmu-miR-200c beg:1895 end:1915 pic:3' AGGTAGTAATGGGC---CGTCATAAT 5'& .|. | |||||.||| &5' ---------GCTGGTTTGCAGTGTTA 3' Usp13 mmu-miR-202-5p beg:1858 end:1872 pic:3' TTTCTTCATATACGTATCCTT 5'& ||||| |||||| &5' --------ATATG-ATAGGA- 3' Usp13 mmu-miR-207 beg:1343 end:1364 pic:3' CTCCCTCCTCTCGGTCCTCTTCG 5'& ||| |.|| ||||||.||. &5' --GGGTTGGGA--CAGGAGGAGT 3' Usp13 mmu-miR-20a beg:1008 end:1030 pic:3' GATGGACGTGAT-ATTCGTGAAAT 5'& |||| |..|||||||| &5' -----TGCAACCTTGGGCACTTTA 3' Usp13 mmu-miR-20b beg:1008 end:1029 pic:3' GATGGACGTGAT-ACTCGTGAAAC 5'& |||| ||.||||||| &5' -----TGCAACCTTGGGCACTTT- 3' Usp13 mmu-miR-20bstar beg:1027 end:1046 pic:3' GATCTTCACGAGTGTGACGTCA 5'& ||.| || ||||||| &5' --AGGA-TGAGA--ACTGCAG- 3' Usp13 mmu-miR-2135 beg:818 end:838 pic:3' CAAAGCCGGGG---TTCTGGAGA 5'& |.||| ||||.|||| &5' ------GTCCCTCAAAGATCTCT 3' Usp13 mmu-miR-2140 beg:1871 end:1892 pic:3' TGGTGGTTCTAGACGTGGA 5'& |. || | .||||||| &5' ATGACTGAAC-TTGCACCT 3' Usp13 mmu-miR-214 beg:983 end:1002 pic:3' TGACGGACAGACACGGACGACA 5'& ||||||| .||||||| &5' ACTGCCTA------TCTGCTGT 3' Usp13 mmu-miR-2141 beg:153 end:176 pic:3' TTGAAA-AGA-CTGTGGAGGA 5'& |.||| || |||||||.|| &5' AGCTTGGTCACGACACCTTCT 3' Usp13 mmu-miR-218-1star beg:879 end:893 pic:3' CCACGAACTGCCTTGGTACAAA 5'& ||.|.|||||| &5' ----------GGGATCATGTT- 3' Usp13 mmu-miR-22 beg:792 end:812 pic:3' TGTCAAGAAGTTGA--CCGTCGAA 5'& |||. | ||||||| &5' ------CTTTGCCCGGGGCAGCT- 3' Usp13 mmu-miR-23a beg:1957 end:1975 pic:3' CCTTTAGGGACCGTTACACTA 5'& .|||.| ||||||.| &5' --GAATTCA----AATGTGGT 3' Usp13 mmu-miR-23b beg:500 end:522 pic:3' CCATTAGGGAC-CGT-TACACTA 5'& |.| . || | .||||| &5' ---AGTGTGTGTGAGTGTGTGA- 3' Usp13 mmu-miR-25 beg:1122 end:1145 pic:3' AGTCT-GGCTCTGTTCACGTTAC 5'& .||| ..| || |||||.|| &5' -TAGAGTTGTGAAT-GTGCAGTG 3' Usp13 mmu-miR-26bstar beg:1100 end:1122 pic:3' CTCGGTTCATTACCTCTTGTCC 5'& ||||. | |||||||| &5' -AGCCGTGGCCT-GAGAACAG- 3' Usp13 mmu-miR-27a beg:1146 end:1169 pic:3' CGCCTTGAAT-CGGT-GACACTT 5'& ||||| ||. |||||| &5' --GGAACGAGCGCTCTCTGTGA- 3' Usp13 mmu-miR-27astar beg:396 end:421 pic:3' ACGAGTGTTC---GTCGATTCGGGA 5'& .|||. ||| ||||..|| &5' --TTCATTTCCCACAG-TAAGTTCT 3' Usp13 mmu-miR-27bstar beg:1314 end:1329 pic:3' CAAGTGGTTAGTCG-ATTCGAGA 5'& ||| |..|||| &5' ----------CAGAATGGGCTC- 3' Usp13 mmu-miR-2861 beg:1060 end:1082 pic:3' GGCGG-GCGG-CGGTCCGGGG 5'& |.|| .||| ||| .||| &5' CTGCAATGCCAGCCT--TCCC 3' Usp13 mmu-miR-290-3p beg:1006 end:1029 pic:3' CCCGAATTTTGATCCGCCGTGAAA 5'& ||. ||| | |||||||| &5' -GGTGC--AACCTTG-GGCACTTT 3' Usp13 mmu-miR-294 beg:1007 end:1029 pic:3' TGTGTGTTTTCCCTTCGTGAAA 5'& . ||| ..||||||| &5' --GTGCAACCTT-GGGCACTTT 3' Usp13 mmu-miR-295 beg:1006 end:1029 pic:3' TCTGAGTTTTCATCATCGTGAAA 5'& |. ||| .||||||| &5' -GGTGCAACCTTG--GGCACTTT 3' Usp13 mmu-miR-296-3p beg:959 end:986 pic:3' CCTC--TCGGAGGTGGGT-TGGGAG 5'& ||.| |||.|.| ||. .||||| &5' GGGGCCAGCTTTC-CCTCTGCCCTC 3' Usp13 mmu-miR-297astar beg:520 end:543 pic:3' ATACCCATACACACATACATAT 5'& |.|| ||||||||||.|||. &5' TGTGTGTATGTGTGTGTGTG-- 3' Usp13 mmu-miR-297astar beg:506 end:531 pic:3' ATACCCATACACACATACATAT 5'& |.|| ||.|||| ||.|||.|| &5' TGTGAGTGTGTGAGTGTGTGTA 3' Usp13 mmu-miR-297b-3p beg:520 end:543 pic:3' ATACCCATACACACATACATAT 5'& |.|| ||||||||||.|||. &5' TGTGTGTATGTGTGTGTGTG-- 3' Usp13 mmu-miR-297b-3p beg:506 end:531 pic:3' ATACCCATACACACATACATAT 5'& |.|| ||.|||| ||.|||.|| &5' TGTGAGTGTGTGAGTGTGTGTA 3' Usp13 mmu-miR-297cstar beg:520 end:543 pic:3' ATACCCATACACACATACATAT 5'& |.|| ||||||||||.|||. &5' TGTGTGTATGTGTGTGTGTG-- 3' Usp13 mmu-miR-297cstar beg:506 end:531 pic:3' ATACCCATACACACATACATAT 5'& |.|| ||.|||| ||.|||.|| &5' TGTGAGTGTGTGAGTGTGTGTA 3' Usp13 mmu-miR-298 beg:960 end:983 pic:3' CCCTTCTTGTCGGGA-GGAGACGG 5'& |||. ||||..| |||||||| &5' GGGGC---CAGCTTTCCCTCTGCC 3' Usp13 mmu-miR-29astar beg:1992 end:2016 pic:3' GACTTGTG--GTTTTCTTTAGTCA 5'& |||||| .|||||| |.| &5' -TGAACAAAATAAAAGATTTTA-- 3' Usp13 mmu-miR-300star beg:382 end:403 pic:3' TGTTTCCTATTGG---AGAGAAGTT 5'& |.|..| | |||||| &5' ------GGTGGCATTGTGTCTTCA- 3' Usp13 mmu-miR-301b beg:1059 end:1078 pic:3' CGAAACTGTTATGGTAACGTGAC 5'& ||| .||||.||| || || &5' GCT---GCAATGCCA--GC-CT- 3' Usp13 mmu-miR-302a beg:360 end:383 pic:3' AGTGGTTTTGTACCT--TCGTGAAT 5'& .|||||| |||| .|||.||| &5' ---TCAAAACCTGGACTGGCATTTA 3' Usp13 mmu-miR-3099 beg:946 end:968 pic:3' AGGGGTTGGAGAGAGATCGGAT 5'& ||.|. ||.||||| .||| &5' TCTCT-ACTTCTCTGGGGCC-- 3' Usp13 mmu-miR-30estar beg:909 end:931 pic:3' CGACATTTGTAGGCT---GACTTTC 5'& |||| ||.|. |||||| &5' -CTGTTTT--TCTGGTCTCTGAAA- 3' Usp13 mmu-miR-32 beg:1123 end:1145 pic:3' ACGTTGAATCATTACACGTTAT 5'& .| ||. ||||||||.|. &5' ---GAGTTGTGAATGTGCAGTG 3' Usp13 mmu-miR-325 beg:1320 end:1335 pic:3' AACTATCCTCCACGAGTTATTT 5'& || |||||.|||| &5' ---------GG-GCTCAGTAAA 3' Usp13 mmu-miR-326 beg:1739 end:1758 pic:3' TGACCTCCTTCCCGGGTCTCC 5'& |||| |||.||||| &5' ----GAGGCTTGGCTCAGAG- 3' Usp13 mmu-miR-328 beg:1421 end:1439 pic:3' TGCCTTCCCGTCTCTCCCGGTC 5'& |||| | .|||||.| &5' ------GGGCTGT-GGGGCCGG 3' Usp13 mmu-miR-330 beg:1738 end:1759 pic:3' CGGATTCTGTGTCCGGGTCTCT 5'& .|.||.| |||.|||||| &5' --TTGAGGCTT-GGCTCAGAGA 3' Usp13 mmu-miR-330 beg:202 end:218 pic:3' CGGATTCTGTGTCCGGGTCTCT 5'& ||| |..|||||| &5' ------GACT---GTTCAGAGA 3' Usp13 mmu-miR-330star beg:777 end:801 pic:3' AGAGACGTCCGGGACACGAAACG 5'& ||| ||. ||||||||||| &5' TCT-TGTCACA-CTGTGCTTTGC 3' Usp13 mmu-miR-331-3p beg:1466 end:1487 pic:3' AAGATCCTATCCGGGTCCCCG 5'& ||| | || |.|||||| &5' -TCTCAGTT-GG-CTAGGGGC 3' Usp13 mmu-miR-331-5p beg:973 end:994 pic:3' CCTAGGGACCCTGGT-ATGGATC 5'& |.||| .|| |.|||| &5' ----CTCTGCCCTCACTGCCTA- 3' Usp13 mmu-miR-335-3p beg:1291 end:1311 pic:3' CCAGTCCTCGTTA--TTACTTTTT 5'& .|||. ||||||.|| &5' -------GGCAGAAAAATGAAGAA 3' Usp13 mmu-miR-33star beg:381 end:405 pic:3' CACTA-CGTGACACCTTTGTAAC 5'& ||.| |||.|||| |||| &5' -TGGTGGCATTGTGTCTTCATT- 3' Usp13 mmu-miR-33star beg:221 end:243 pic:3' CACTACGTGACACCTTTGTAAC 5'& |||||| | |.|||||| &5' GTGATGGAAGAAA-AGACATTG 3' Usp13 mmu-miR-3470b beg:204 end:226 pic:3' GGTCGGACCAGA---TGTCTCACT 5'& ||| || | ||.|||| &5' -----CTGTTCAGAGAGAGGGTGA 3' Usp13 mmu-miR-3470b beg:1890 end:1913 pic:3' GGTCG--GACCAGATGTCTCACT 5'& |||. |||||.|.||| || &5' -CAGTGGCTGGTTTGCAGTGT-- 3' Usp13 mmu-miR-34a beg:1621 end:1640 pic:3' TGTTGGTCGATTCTGTGACGGT 5'& |..|| | .|||||| &5' ---ATTAGAGT-G-TACTGCC- 3' Usp13 mmu-miR-34a beg:972 end:992 pic:3' TGTTGGT--CGATTCTGTGACGGT 5'& || || ||||||| &5' ----CCTCTGCCCT--CACTGCC- 3' Usp13 mmu-miR-34a beg:251 end:270 pic:3' TGTTGGTCGATTCTGTGACGGT 5'& |.|| ||.|||||.| &5' ---ATCAAT--AGGCACTGTC- 3' Usp13 mmu-miR-34a beg:1714 end:1726 pic:3' TGTTGGTCGATTCTGTGACGGT 5'& |||||||.| &5' ------------GACACTGTC- 3' Usp13 mmu-miR-34b-5p beg:1621 end:1641 pic:3' TGTTAGTCGATTAATGTGACGGA 5'& ||.|| |..||||||| &5' ---ATTAGAG---TGTACTGCCT 3' Usp13 mmu-miR-34b-5p beg:251 end:271 pic:3' TGTTAGTCGATTAATGTGACGGA 5'& |||| || .|||||.|| &5' ---ATCAA-TAG--GCACTGTCT 3' Usp13 mmu-miR-34c beg:1625 end:1641 pic:3' CGTTAGTCGATTGATGTGACGGA 5'& .| |..||||||| &5' ----------GAGTGTACTGCCT 3' Usp13 mmu-miR-350 beg:193 end:207 pic:3' CTTTCACATACCCGAAACACTT 5'& |||.||||||| &5' ----------GGGTTTTGTGA- 3' Usp13 mmu-miR-361 beg:549 end:572 pic:3' CATGGGGACCTCTAAGACTATT 5'& || |..||||| ||||||.. &5' GT-CTTCTGGATA-TCTGATGG 3' Usp13 mmu-miR-362-5p beg:1014 end:1035 pic:3' TAAGTGTGGATCCA--AGGTTCCTAA 5'& || |.|.|| |..|||||| &5' ----AC-CTTGGGCACTTTAAGGAT- 3' Usp13 mmu-miR-363 beg:1124 end:1144 pic:3' ATGTCTAC-CTATGGCACGTTAA 5'& || || || .|||||.| &5' ---AGTTGTGAA--TGTGCAGT- 3' Usp13 mmu-miR-367 beg:1125 end:1144 pic:3' AGTGGTAACGATTTCACGTTAA 5'& .|||. |||||.| &5' -----GTTGTGAATGTGCAGT- 3' Usp13 mmu-miR-375 beg:1103 end:1123 pic:3' AGTGCGCTCGGCTTGCTTGTTT 5'& ||.| ||| .| |||||.| &5' ---CGTG-GCCTGA-GAACAGA 3' Usp13 mmu-miR-377 beg:499 end:522 pic:3' TGTTTTCA-ACGGAA--ACACACTA 5'& .||| ||. | ||||||| &5' ----GAGTGTGTGTGAGTGTGTGA- 3' Usp13 mmu-miR-377 beg:528 end:544 pic:3' TGTTTTCAACGGAAACACACTA 5'& ||. | ||||||| &5' --------TGTGTGTGTGTGA- 3' Usp13 mmu-miR-378 beg:1198 end:1220 pic:3' GGAAGACTG--AGGTTCAGGTCA 5'& || ||||. |.| .|||||| &5' CC-TCTGGAGTTTCTGGTCCAG- 3' Usp13 mmu-miR-380-3p beg:1965 end:1988 pic:3' TTCTACACCTGGTA-TGATGTAT 5'& |||||| | |.|.|||. &5' ---ATGTGGTCAAAGATTGCATG 3' Usp13 mmu-miR-380-3p beg:112 end:133 pic:3' TTCTACACCTGGTATGATGTAT 5'& ||||| ||| |||||||. &5' -AGATGCGGAGG--ACTACATG 3' Usp13 mmu-miR-382star beg:1117 end:1138 pic:3' TTTTTCACAACAGGCACTTACT 5'& |.||| ..||||||| &5' --AGAGTAGAG-TTGTGAATG- 3' Usp13 mmu-miR-382star beg:505 end:525 pic:3' TTTTTCACAA-CAGGCACTTACT 5'& |||| || .||||.|| &5' -----GTGTGAGTGTGTGAGTG- 3' Usp13 mmu-miR-383 beg:1195 end:1217 pic:3' TCGGTGTCAGTGGAAGACTAGA 5'& |||| | | | .|||||.|| &5' AGCCTCTGG-AGTTTCTGGTC- 3' Usp13 mmu-miR-383 beg:905 end:925 pic:3' TCGGTGTCAGT--GGAAGACTAGA 5'& ||| ..|||||.||| &5' -------GTCTGTTTTTCTGGTCT 3' Usp13 mmu-miR-449a beg:971 end:992 pic:3' TGGTCGATTGTTATGTGACGGT 5'& || || .| ||||||| &5' -CCCTCT-GCCCT-CACTGCC- 3' Usp13 mmu-miR-449b beg:962 end:992 pic:3' CGGTCGAT-------TGTT-GTGACGGA 5'& ||||||| .| |||||||| &5' GCCAGCTTTCCCTCTGCCCTCACTGCCT 3' Usp13 mmu-miR-449b beg:1619 end:1641 pic:3' CGGTCGATTGTT-GTGACGGA 5'& ||| .||. .||||||| &5' -CCA-TTAGAGTGTACTGCCT 3' Usp13 mmu-miR-449c beg:244 end:271 pic:3' GGTC-GATCGTTA--CGTGACGGA 5'& |||| ||| |||| ||||||.|| &5' CCAGCCTATCAATAGGCACTGTCT 3' Usp13 mmu-miR-449c beg:1619 end:1641 pic:3' GGTCGATCGTTACGTGACGGA 5'& ||| .||| |.||.||||||| &5' CCA-TTAG-AGTGTACTGCCT 3' Usp13 mmu-miR-449c beg:1057 end:1078 pic:3' GGTCGATCGTTACGTGACGGA 5'& ||||| ||||||| | |||| &5' -CAGCT-GCAATGC-CAGCCT 3' Usp13 mmu-miR-449c beg:971 end:993 pic:3' GGTCGATCGTTACGTGACGGA 5'& || || || |||||||| &5' CCCTCT-GCCCT-CACTGCCT 3' Usp13 mmu-miR-450a-3p beg:1834 end:1854 pic:3' TACTTACGTTTCG---TAGGGGTTA 5'& |||| .||||.|| &5' -------CAAAACTCAGTCCCTAA- 3' Usp13 mmu-miR-450b-5p beg:1027 end:1047 pic:3' ATAAGTCCTTG-TATGACGTTTT 5'& |||| . ||||||.|. &5' -----AGGATGAGAACTGCAGAG 3' Usp13 mmu-miR-452 beg:1507 end:1528 pic:3' CAGAGTCAAAGG---AGACGTTTGT 5'& |||||||||| |||||| &5' --CTCAGTTTCCGCATCTGCA---- 3' Usp13 mmu-miR-455 beg:1770 end:1793 pic:3' CACATATACGGGCACCTGA-CG 5'& |||.|.||.|| ||| || &5' -TGTGTGTGTCCCT-GACCAGC 3' Usp13 mmu-miR-455 beg:501 end:526 pic:3' CACATATACGGGCAC-CTGACG 5'& ||||.|.|| .||| || ||. &5' GTGTGTGTGAGTGTGTGAGTGT 3' Usp13 mmu-miR-455star beg:1965 end:1990 pic:3' GCTACATCAGG--TTTCCGTGTAT 5'& ||||.||| .| |||..|| &5' --ATGTGGTCAAAGATTGCATGTA 3' Usp13 mmu-miR-464 beg:143 end:163 pic:3' ATAGAGTG-TCTTATTTGAACCAT 5'& |||. ||| .|||||| &5' --TCTTTTAAGA----GCTTGGT- 3' Usp13 mmu-miR-466a-3p beg:514 end:537 pic:3' AGAATACACACGCACATACATAT 5'& |.|| |||.||||||||.|. &5' ---TGTGAGTGTGTGTATGTGTG 3' Usp13 mmu-miR-466b-3-3p beg:514 end:536 pic:3' AGAATACACACGCACATACATAA 5'& |.|| |||.||||||||.| &5' ---TGTGAGTGTGTGTATGTGT- 3' Usp13 mmu-miR-466b-3p beg:514 end:537 pic:3' AGAATACACACGCACATACATAT 5'& |.|| |||.||||||||.|. &5' ---TGTGAGTGTGTGTATGTGTG 3' Usp13 mmu-miR-466c-3p beg:514 end:537 pic:3' AGAATACACACGCACATACATAT 5'& |.|| |||.||||||||.|. &5' ---TGTGAGTGTGTGTATGTGTG 3' Usp13 mmu-miR-466d-3p beg:514 end:537 pic:3' GATACACACGCACATACATAT 5'& |.|| |||.||||||||.|. &5' -TGTGAGTGTGTGTATGTGTG 3' Usp13 mmu-miR-466e-3p beg:514 end:537 pic:3' AGAATACACACGCACATACATAT 5'& |.|| |||.||||||||.|. &5' ---TGTGAGTGTGTGTATGTGTG 3' Usp13 mmu-miR-466f-3p beg:521 end:543 pic:3' CACACATACACACACACATAC 5'& ||||||||||||||||||. &5' GTGTGTATGTGTGTGTGTG-- 3' Usp13 mmu-miR-466g beg:519 end:542 pic:3' ACACACACGTACACAGACATA 5'& |||||||.|||||| |||.| &5' -GTGTGTGTATGTGTGTGTGT 3' Usp13 mmu-miR-466g beg:502 end:526 pic:3' ACACACACGTACACAGACATA 5'& |||||||| .||||| ||.| &5' TGTGTGTGAGTGTGTGAGTGT 3' Usp13 mmu-miR-466i beg:500 end:521 pic:3' ATCACACATACACACACACATA 5'& |||||||.|| ||||||| &5' -AGTGTGTGTGAGTGTGTG--- 3' Usp13 mmu-miR-467a-1star beg:513 end:538 pic:3' CACATCCACACACATACATATA 5'& ||||. ||||||||||||.|.| &5' GTGTGAGTGTGTGTATGTGTGT 3' Usp13 mmu-miR-467b beg:124 end:142 pic:3' GTATATGTACGTCCGTGAATG 5'& |||||| ||.|||||| &5' ----TACATG--GGTACTTAC 3' Usp13 mmu-miR-467bstar beg:513 end:538 pic:3' CACAACCACACACATACATATA 5'& |||| ||||||||||||.|.| &5' GTGTGAGTGTGTGTATGTGTGT 3' Usp13 mmu-miR-467dstar beg:513 end:538 pic:3' CACATCCACACACATACATATA 5'& ||||. ||||||||||||.|.| &5' GTGTGAGTGTGTGTATGTGTGT 3' Usp13 mmu-miR-467estar beg:513 end:538 pic:3' TATATCCACACACATACATATA 5'& .|.|. ||||||||||||.|.| &5' GTGTGAGTGTGTGTATGTGTGT 3' Usp13 mmu-miR-467f beg:511 end:534 pic:3' ACATCCACACACACACATATA 5'& ||. ||| ||||||||||.| &5' -GTGTGTGAGTGTGTGTATGT 3' Usp13 mmu-miR-467g beg:523 end:543 pic:3' TATATACACACACATACATAT 5'& .|.|||||||||||.|| &5' GTGTATGTGTGTGTGTG---- 3' Usp13 mmu-miR-470star beg:367 end:388 pic:3' AGAAGAGTCTTTCC----ATGACCAA 5'& .|| || ||||||| &5' -------GGACTGGCATTTACTGGT- 3' Usp13 mmu-miR-485 beg:1181 end:1204 pic:3' CTTAAGTAGTGCC-GGTCGGAGA 5'& ||||||| ||||||||| &5' ---TTCATCAAATCCCAGCCTCT 3' Usp13 mmu-miR-485 beg:1063 end:1079 pic:3' CTTAAGTAGTGCCGGTCGGAGA 5'& || ||||||||. &5' --------CAATGCCAGCCTT- 3' Usp13 mmu-miR-485star beg:1117 end:1141 pic:3' CTCTCCTCTCGGCACATAC-TGA 5'& |||| ||||..||| ||| .| &5' -AGAGTAGAGTTGTGAATGTGC- 3' Usp13 mmu-miR-485star beg:517 end:545 pic:3' CTCTC-CTCTCG-----GCACATACTGA 5'& ||| | | |. .||||.|||| &5' --GAGTGTGTGTATGTGTGTGTGTGAC- 3' Usp13 mmu-miR-488 beg:1481 end:1502 pic:3' CTGGTTCTTTGTCGGAAAGTT 5'& |.|||. | ||||||| &5' GGCCAGTC--CTTCCTTTCA- 3' Usp13 mmu-miR-488 beg:1911 end:1933 pic:3' CTGGTTCTTTGTCGGAAAGTT 5'& || ||| || .|||||||| &5' -ACAAAGCAAAGGCCTTTCA- 3' Usp13 mmu-miR-489 beg:520 end:542 pic:3' CGACG-GTATATACAC-CACAGTAA 5'& ||. ..|||.|||| |||| &5' --TGTGTGTATGTGTGTGTGT---- 3' Usp13 mmu-miR-493 beg:616 end:637 pic:3' GGACCGTGTGTCATCCTGGAAGT 5'& |||| .|| |.|||.| &5' ---GGCAGGCAAAC--ATCTTTA 3' Usp13 mmu-miR-500 beg:1437 end:1459 pic:3' ACTTGGGAA-CGGGTCCACGTAA 5'& |..|. ||| ||||||| &5' -GGGCTAGAGGCCTGGGTGCAT- 3' Usp13 mmu-miR-511 beg:603 end:623 pic:3' ACTCACGTCT-CGTTTTCCGTA 5'& ||.| | |||||||| &5' ----TGTATTTGGAAAAGGCA- 3' Usp13 mmu-miR-532-3p beg:1413 end:1435 pic:3' ACGTTCGGAACCC-ACACCCTCC 5'& ||.||||| |||| ||||||. &5' TGTAAGCC-TGGGCTGTGGGG-- 3' Usp13 mmu-miR-540-3p beg:404 end:426 pic:3' GGTCCTAGCTGGAGACTGGA 5'& ||| .| | .|||||||| &5' CCACAGTA-AGTTCTGACCT 3' Usp13 mmu-miR-540-3p beg:1352 end:1371 pic:3' GGTCCTAGCTGGAGACTGGA 5'& ||||| |. ||||||| &5' -CAGGA--GGAGTCTGACC- 3' Usp13 mmu-miR-540-5p beg:529 end:550 pic:3' TGTCTCAGTCTCCCACTGGGAAC 5'& || | | ||||||.||| &5' -----GTGTGTGTGTGACCTTTG 3' Usp13 mmu-miR-541 beg:1359 end:1382 pic:3' TCACACTGGTTGTAGTCTTAGGGAA 5'& ||| |||||| .|||||.|.| &5' AGTCTGACCA--GTCAGAGTTC--- 3' Usp13 mmu-miR-542-3p beg:767 end:790 pic:3' AAAGTCAATAG--TTAG-ACAGTGT 5'& ||| |.|| ||||||| &5' ---CAGGTGCCTAAGTCTTGTCACA 3' Usp13 mmu-miR-542-3p beg:1040 end:1062 pic:3' AAAGTCAATAGTTAGACAGTGT 5'& ||| || ||||||.|| &5' ---CAGAGATGTTTCTGTCGCA 3' Usp13 mmu-miR-542-5p beg:1765 end:1788 pic:3' AGCACTGTACTAC-TAGGGGCTC 5'& || || ..|| || .||||.|| &5' TC-TGCTGTG-TGTGTCCCTGA- 3' Usp13 mmu-miR-547 beg:1745 end:1766 pic:3' GAGTGAGTTTCTACATGGTTC 5'& | .||||.|||| |.||| &5' -TGGCTCAGAGATC--CTAAG 3' Usp13 mmu-miR-574-3p beg:514 end:539 pic:3' ACACCCACACACGTACTCGCAC 5'& |||| |||||||.||| |.||| &5' TGTGAGTGTGTGTATGTGTGTG 3' Usp13 mmu-miR-574-3p beg:502 end:527 pic:3' ACACCCACACACGTACTCGCAC 5'& |||| ||| |||..||||.||| &5' TGTGTGTGAGTGTGTGAGTGTG 3' Usp13 mmu-miR-615-5p beg:1720 end:1739 pic:3' CTAGGCTCGTGGC-CCCTGGGGG 5'& .||| |||.| ||||||.. &5' -GTCC---CACTGAGGGACCTT- 3' Usp13 mmu-miR-666-3p beg:435 end:453 pic:3' TCGTCCGCTAGTGCGACGTCGG 5'& |.|| ||. ||||||. &5' --CGGGA---CAT-CTGCAGT- 3' Usp13 mmu-miR-669f beg:519 end:539 pic:3' TATGCACACACACATACATATAC 5'& ||||||||||||.|.|| &5' ------GTGTGTGTATGTGTGTG 3' Usp13 mmu-miR-669g beg:1050 end:1072 pic:3' TAGTACAGTTGTGTATGTTACGT 5'& || ||||. .| |.|||||| &5' -TC-TGTCGCAGC-TGCAATGC- 3' Usp13 mmu-miR-669h-3p beg:522 end:543 pic:3' ACACGTACACACATATACGTAT 5'& ||||.||||||||.|.|| &5' TGTGTATGTGTGTGTGTG---- 3' Usp13 mmu-miR-669i beg:521 end:543 pic:3' CATACGTACACACATATACGT 5'& ||.||.||||||||.|.|| &5' GTGTGTATGTGTGTGTGTG-- 3' Usp13 mmu-miR-669j beg:520 end:543 pic:3' ACAAACGTACACTCATATACGT 5'& ||| ||.||||| ||.|.|| &5' TGTGTGTATGTGTGTGTGTG-- 3' Usp13 mmu-miR-669j beg:506 end:531 pic:3' ACAAACGTACACTCATATACGT 5'& ||| |..|||||||.|.||.| &5' TGTGAGTGTGTGAGTGTGTGTA 3' Usp13 mmu-miR-669k beg:524 end:543 pic:3' AACGTACGCACATATACGTAT 5'& ||.|||.||||.|.|| &5' -TGTATGTGTGTGTGTG---- 3' Usp13 mmu-miR-669m beg:511 end:538 pic:3' TATACAA--ACACACCTACATATA 5'& .|.||| |||||| ||||.|.| &5' GTGTGTGAGTGTGTGTATGTGTGT 3' Usp13 mmu-miR-671-3p beg:1420 end:1439 pic:3' CCACCTCGGGACTCTTGGCCT 5'& ||| ||. || |..||||. &5' --TGG-GCTGTG-GGGCCGGG 3' Usp13 mmu-miR-671-5p beg:1547 end:1572 pic:3' GAGGTCGGGGAGGTC--CCGAAGGA 5'& |||| |||.||.|| |||||. &5' -TCCACCCCTTCTAGCAGGCTTT-- 3' Usp13 mmu-miR-671-5p beg:292 end:314 pic:3' GAGGTCGG-GGAGG-TCCCGAAGGA 5'& .|.| |. ||||||||| &5' ----GGTCACTGGTAAGGGCTTCC- 3' Usp13 mmu-miR-672 beg:1182 end:1203 pic:3' AGTGTGTGTCATGTGGTTGGAGT 5'& |||. || | |||.|||| &5' TCAT-CAAAT--C-CCAGCCTC- 3' Usp13 mmu-miR-673-5p beg:1118 end:1135 pic:3' GAGGTTCCTGGTCTCGACACTC 5'& || .||||.||||| &5' -------GAGTAGAGTTGTGA- 3' Usp13 mmu-miR-673-5p beg:1417 end:1434 pic:3' GAGGTTCCTGGTCTCGACACTC 5'& .|| |.||||||.| &5' --------GCCTGGGCTGTGGG 3' Usp13 mmu-miR-673-5p beg:986 end:1003 pic:3' GAGGTTCCTGGTCT--CGACACTC 5'& .|| ||||||. &5' --------GCCTATCTGCTGTGG- 3' Usp13 mmu-miR-673-5p beg:1150 end:1169 pic:3' GAGGTTCCTGGTCTCGACACTC 5'& |.|| .|. |||||| &5' ---CGAGCGCTCT--CTGTGA- 3' Usp13 mmu-miR-678 beg:1098 end:1118 pic:3' GGAGGTCAGGAA-CGTGGCTCTG 5'& |.|| || || |.|||| &5' ---CTAG-CCGTGGC-CTGAGA- 3' Usp13 mmu-miR-678 beg:422 end:444 pic:3' GGAGGTCAGGA--ACGTGGCTCTG 5'& |.|| |. ||.||||.||| &5' ---CTAG-CTATGTGTACCGGGAC 3' Usp13 mmu-miR-679 beg:858 end:880 pic:3' TGGTTCTCAGTG-GAGTGTCAGG 5'& .|.||| |||. ||||| ||| &5' -TCGAGA-TCATGCTCAC--TCC 3' Usp13 mmu-miR-680 beg:756 end:777 pic:3' GGGGGT-ACAGTCGTCTACGGG 5'& || || |. |||.||||. &5' ----CATTGACGCCAGGTGCCT 3' Usp13 mmu-miR-687 beg:1853 end:1874 pic:3' AGTAACGACGTAAG--GTCCTATC 5'& || ||| .|||||| &5' -----GCCACATATGATAGGATA- 3' Usp13 mmu-miR-691 beg:1941 end:1956 pic:3' AAAAGACGGAGAGAAGTCCTTA 5'& || || ||||||. &5' ------GCA--TC-TCAGGAG- 3' Usp13 mmu-miR-692 beg:200 end:220 pic:3' CTCACTCCGCGAGTTTCTCTA 5'& |||| .|.|||.||||| &5' --GTGAC-TGTTCAGAGAGA- 3' Usp13 mmu-miR-693-3p beg:1112 end:1133 pic:3' AATGTCGGTGTAGACTTTCGACG 5'& || ||| |.||.||. &5' ----AGA-ACAGAGTAGAGTTGT 3' Usp13 mmu-miR-696 beg:1815 end:1834 pic:3' GGGTGTCGTTCGTGTGCG 5'& ||.||| .||||| | &5' CCTACACTAAGCAGCC-- 3' Usp13 mmu-miR-703 beg:1949 end:1960 pic:3' AAGAAAGGAAGACTTCCAAAA 5'& |.|||||| &5' ------------GGAGGTTT- 3' Usp13 mmu-miR-705 beg:1534 end:1556 pic:3' ACGGGTG-GGGTGGAGGGTGG 5'& | . || ||| |||.||||| &5' -GGTGACACCC-CCTTCCACC 3' Usp13 mmu-miR-709 beg:1627 end:1643 pic:3' AGGAGGACGGA-GACGGAGG 5'& |. | ||||||.| &5' -------GTGTACTGCCTTC 3' Usp13 mmu-miR-709 beg:1496 end:1519 pic:3' AGGAGG-ACGGAGACGGAGG 5'& || ||. |||||| |..||| &5' TCATCTATGCCTCAGTTTCC 3' Usp13 mmu-miR-713 beg:1125 end:1145 pic:3' CGACAC--ACGGAAGTCACGT 5'& |.|||| ||. ||||| &5' GTTGTGAATGTG--CAGTG-- 3' Usp13 mmu-miR-713 beg:994 end:1015 pic:3' CGACACACGGAAGTCACGT 5'& |||||| ||| ..||||| &5' GCTGTG-GCCCATGGTGCA 3' Usp13 mmu-miR-742star beg:498 end:525 pic:3' ACTA--AT-CGTTGGTACACTCAT 5'& ||| |. | | ..|||||||. &5' TGAGTGTGTGTGAGTGTGTGAGTG 3' Usp13 mmu-miR-743a beg:258 end:274 pic:3' AGATGAGTCGAACCACAGAAAG 5'& .|| |||||||| &5' -------GGCAC--TGTCTTTC 3' Usp13 mmu-miR-743a beg:900 end:919 pic:3' AGATGAGTCGAACC-ACAGAAAG 5'& .|.||| |||.|||| &5' -------GGTTTGTCTGTTTTTC 3' Usp13 mmu-miR-743b-3p beg:258 end:274 pic:3' AGATAAGTCGTACTACAGAAAG 5'& .||| |||||||| &5' -------GGCAC--TGTCTTTC 3' Usp13 mmu-miR-743b-3p beg:900 end:919 pic:3' AGATAAGTCGTACT-ACAGAAAG 5'& .|. || |||.|||| &5' -------GGTTTGTCTGTTTTTC 3' Usp13 mmu-miR-758 beg:1897 end:1919 pic:3' ATCACCTG--GTC-CAGTGTTT 5'& ||| ||| ||.||||| &5' ---TGGTTTGCAGTGTTACAAA 3' Usp13 mmu-miR-758 beg:1526 end:1544 pic:3' ATCACCTGGTCCAGTGTTT 5'& .|||| .||||| ||| &5' -GGTGG-TCAGGTGACA-- 3' Usp13 mmu-miR-761 beg:1764 end:1776 pic:3' ACACAGTCAAAGTGGGACGACG 5'& |.||||||. &5' -------------CTCTGCTGT 3' Usp13 mmu-miR-762 beg:1185 end:1202 pic:3' CGAGACAGGGCCGGGGTCGGGG 5'& .| .|||||||.| &5' -------TCAAATCCCAGCCTC 3' Usp13 mmu-miR-764-3p beg:841 end:862 pic:3' TGTCAACG-GTGATACCGGAGGA 5'& .|||| ||. |||||||. &5' -TAGTTAAACATC-TGGCCTCT- 3' Usp13 mmu-miR-764-5p beg:117 end:139 pic:3' TCCTCCTGTAC-ACTCGTGG 5'& ||||||| ||.|.||. &5' -GGAGGACTACATGGGTACT 3' Usp13 mmu-miR-767 beg:994 end:1015 pic:3' ACGAGTCTGTTGGTACCACGT 5'& ||| |.| |||||||||| &5' -GCTGTGGC--CCATGGTGCA 3' Usp13 mmu-miR-7a beg:547 end:559 pic:3' TGTTGTTTTAGTGATCAGAAGGT 5'& ||||||||. &5' -------------TAGTCTTCT- 3' Usp13 mmu-miR-7b beg:253 end:274 pic:3' TGTTGTTTTAGTGTTCAGAAGGT 5'& |||.|. ||| |||||.| &5' -CAATAGG--CACT-GTCTTTC- 3' Usp13 mmu-miR-7b beg:537 end:559 pic:3' TGTTGTTTTAGTGTTCAGAAGGT 5'& . || | . |||||||. &5' GTGACCT--TTGT-AGTCTTCT- 3' Usp13 mmu-miR-876-5p beg:1740 end:1762 pic:3' ATCACTAAGTGTCTCTTTAGGT 5'& || | || .| |||.|||| &5' -AG-GCTTGGCTCAGAGATCC- 3' Usp13 mmu-miR-877 beg:262 end:286 pic:3' GGGACGC---GGTAGAGGAGATG 5'& |||. || ||||.|||.| &5' --CTGTCTTTCCCTCTCTTCTGC 3' Usp13 mmu-miR-883a-5p beg:1459 end:1476 pic:3' CATTGACGATGAAGAGAGTCGT 5'& | |.|| ||||||. &5' ------GGTGCTG-TCTCAGT- 3' Usp13 mmu-miR-883b-5p beg:1313 end:1333 pic:3' ACTGACGATGGG-TAA--GAGTCAT 5'& || || ||||||| &5' --------ACAGAATGGGCTCAGTA 3' Usp13 mmu-miR-883b-5p beg:1458 end:1476 pic:3' ACTGACGATGGGTAAGAGTCAT 5'& |. ||||. ||||||| &5' -GGGTGCTG-----TCTCAGT- 3' Usp13 mmu-miR-92astar beg:1064 end:1086 pic:3' CATTACGGT-GGTTAGGGGTGGA 5'& ||||||| || |.||||||| &5' --AATGCCAGCC--TTCCCACCT 3' Usp13 mmu-miR-92astar beg:1539 end:1556 pic:3' CATTACGGTGGTTAGGGGTGGA 5'& |||| ..||||| &5' -------CACCCCCTTCCACC- 3' Usp13 mmu-miR-92astar beg:1783 end:1802 pic:3' CATTAC-GGTGGTTAGGGGTGGA 5'& || ||| |.| |||.||| &5' ----TGACCAGCGA-CCCTACC- 3' Usp13 mmu-miR-98 beg:1497 end:1513 pic:3' TTGTTATGTTGAATGATGGAGT 5'& || || |.||||| &5' -------CATCTA--TGCCTCA 3' Usp13 mmu-miR-1946b beg:788 end:803 pic:3' TTTTCGTACACGGTGGTGACGGGCCG 5'& |||||. .||||||| &5' -------TGTGCT----TTGCCCGG- 3' Usp13 mmu-miR-455 beg:364 end:376 pic:3' CACATATACGGGCACCTGACG 5'& || ||||||| &5' ----------CC-TGGACTG- 3' Usp13 mmu-miR-674 beg:1071 end:1100 pic:3' ATGTGGTGAGGGT--------AGAGTCACG 5'& .|| .||||| |.||||||. &5' ---GCC-TTCCCACCTGGTCATTTCAGTGT 3' Usp13 mmu-miR-674 beg:1874 end:1898 pic:3' ATGTGGTGAGGGTA-GAGTCACG 5'& || |||. || .|||||| &5' -ACTGAACTTGCACCTTCAGTG- 3'

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 Usp13 mmu-miR-106b 1022 1029 ------UAGACGUGAC----------------AGUCGUGAAAU |||||| || | :|||||||| CUGCCUAUCUGCUGUGGCCCAUGGUGCAACCUUGGGCACUUUAA Usp13 mmu-miR-129-3p 304 311 U-------------ACGAAAAACC--------CCAUUCCCGAA |||||| || ||||||||||| CUUUCCCUCUCUUCUGCUUUGGGGGGGUCACUGGUAAGGGCUUC Usp13 mmu-miR-141 1907 1914 -----------------GGUAGAAA-UGGUC---UGUCACAAU || || :| | :|||||||| UAAUGACUGAACUUGCACCUUCAGUGGCUGGUUUGCAGUGUUAC Usp13 mmu-miR-17-5p 1022 1029 U---GAUGGACGUGAC----------------AUUCGUGAAAC |||:|||| || |::||||||| CUGCCUAUCUGCUGUGGCCCAUGGUGCAACCUUGGGCACUUUA Usp13 mmu-miR-18 1886 1893 AUA------------------------GACGUGAUCUACGUGGAAU ||| ||| |||||||| UAAGGGCCACAUAUGAUAGGAUAAUGACUGAACU---UGCACCUUC Usp13 mmu-miR-181d 1132 1139 ------UUGGG--UGG-CUGUUGU----------UACUUACAA |:|| :|| || |||| :||||||| UGUCCUAGCCGUGGCCUGAGAACAGAGUAGAGUUGUGAAUGUG Usp13 mmu-miR-193 1484 1491 ----------GACCC-UGA-------AACA----UCCGGUCAA ||||| :|| ||| :||||||| CUGGGUGCAUCUGGGUGCUGUCUCAGUUGGCUAGGGGCCAGUC Usp13 mmu-miR-193 1572 1579 GACC-------------------------CUGAAACAUCCGGUCAA |:|||| |||||||| GGUGACACCCCCUUCCACCCCUUCUAGCAGGCUUU---GGCCAGUUC Usp13 mmu-miR-200a 1907 1914 --------------UGU---AG-CAAUGGUC---UGUCACAAU :|| || || :| | :|||||||| UAAUGACUGAACUUGCACCUUCAGUGGCUGGUUUGCAGUGUUAC Usp13 mmu-miR-207 176 183 CUCCCUCC----UCUCGGU----------------CCUCUUCG |||||: ||||||| CUGCUUCUUUUAAGAGCUUGGUCACGACACCUUCUGGAGAAGA Usp13 mmu-miR-20a 1022 1029 ----GAUGGACG----------------UGAUAUUCGUGAAAU |||:|||| || |::|||||||| CUGCCUAUCUGCUGUGGCCCAUGGUGCAACCUUGGGCACUUUAA Usp13 mmu-miR-20b 1022 1029 -----AUGGACG----------------UGAUACUCGUGAAAC ||:|||| || ||:||||||| CUGCCUAUCUGCUGUGGCCCAUGGUGCAACCUUGGGCACUUUA Usp13 mmu-miR-22 805 812 -------------------UGUCAAGAAGUUGA--CCGUCGAA || || |||: | ||||||| GGUGCCUAAGUCUUGUCACACUGUGCUUUGCCCGGGGCAGCUG Usp13 mmu-miR-296 1389 1396 UGUCCUAACUCCC-----------------------CCCCGGGA |||||| ||| |||||||| ACAGGAG-GAGUCUGACCAGUCAGAGUUCAAACCCCGGGGCCCUG Usp13 mmu-miR-298 975 982 CC--------------------UUCUUGUCGGGA-GGAGACGG ::| ||||::| |||||||| UUUUUUACAUCUCUACUUCUCUGGGGCCAGCUUUCCCUCUGCCC Usp13 mmu-miR-320 967 974 AAGC--------------------GGGAGAGUUGGGUCGAAAA ::|||| :: |||||||| UUCUUACGUUUUUUACAUCUCUACUUCUCUGGGGCCAGCUUUC Usp13 mmu-miR-328 1853 1860 UGCCUUCC--CGUCUC-------------------UCCCGGUC |||| ||||||| CCUACACUAAGCAGCCUUACAAAACUCAGUCCCUAAGGGCCAC Usp13 mmu-miR-330 793 800 AGAGAC----GUCCGG----------------GACACGAAACG ||||: ||||||||||| ACAUUGACGCCAGGUGCCUAAGUCUUGUCACACUGUGCUUUGCC Usp13 mmu-miR-337 701 708 -----------------------UUUC-CGUAGUAUAUCCUCGACUU |||| |:| || |||||||: AAUGAGUUCCCCACUUGGAUUUUAAAGAGUA-CAGA---GAGCUGAGU Usp13 mmu-miR-342 508 515 CUGCC--------------------CACGCUAAAGACACACUCU || :|| | |||||||| AUCACAUCAAACUUUAUAUUACACUGUAUGAG-UGUGUGUGAGU Usp13 mmu-miR-342 516 523 ---------------------CU-GCCCACGCUAAAGACACACUCU || :| |||:|| |||||||| AAACUUUAUAUUACACUGUAUGAGUGUGUGUGAG---UGUGUGAGU Usp13 mmu-miR-34a 985 992 U-----------UGUUGGUCGAUUCU---------GUGACGGU : ::|||||| ||||||| CUCUACUUCUCUGGGGCCAGCUUUCCCUCUGCCCUCACUGCCU Usp13 mmu-miR-34b 986 993 GUUA------------GUCGAUUAAU--------GUGACGGAU ||||| ||||||||| UCUACUUCUCUGGGGCCAGCUUUCCCUCUGCCCUCACUGCCUAU Usp13 mmu-miR-34b 1634 1641 GU-----------------------UAGUCGAUUAAUGUGACGGAU ||:|| |::||||||| CAGAAGGUAGAACGUGGUAGGUCCCAUUAGAG---UGUACUGCCUU Usp13 mmu-miR-34c 985 992 ------------CGUUAGUCGAU-------UGAU-GUGACGGA | : ||||| :| |||||||| CUCUACUUCUCUGGGGCCAGCUUUCCCUCUGCCCUCACUGCCUA Usp13 mmu-miR-350 200 207 ---------------------ACUUUCACAUACCCGAAACACUU || | |||:||||||| CGACACCUUCUGGAGAAGAACUGGGAAUAGG-GGGUUUUGUGAC Usp13 mmu-miR-380-3p 125 132 U-----------------------UCUACACCUGGUAUGAUGUAU ||||| ||| |||||||: AUAAAGGAAAAAAGUUGGGACAGCAGAUGCGGAGG--ACUACAUGG Usp13 mmu-miR-449 985 992 ---------------UGGUCGAU-------UGUUAUGUGACGGU :|||||| :| ||||||| CUCUACUUCUCUGGGGCCAGCUUUCCCUCUGCCCU-CACUGCCU Usp13 mmu-miR-449b 985 992 ----------------GGUCGAU-------CGUUACGUGACGGA |||||| || |||||||| CUCUACUUCUCUGGGGCCAGCUUUCCCUCUGCCCU-CACUGCCUA Usp13 mmu-miR-485-5p 1196 1203 CUU--------------------AAGUAGUGCC-GGUCGGAGA ||||||| ||||||||| CUCUGUGAUUUUUGUUAUUACUUUUCAUCAAAUCCCAGCCUCUG Usp13 mmu-miR-488* 1495 1502 -----------------CUGGUUCUUUGUC-----GGAAAGUU |:|:|:|: ||| ||||||| UGGGUGCUGUCUCAGUUGGCUAGGGGCCAGUCCUUCCUUUCAU Usp13 mmu-miR-488* 1926 1933 C----------------------UGGUUCUUUGUCGGAAAGUU || ||| || :|||||||| UUCAGUGGCUGGUUUGCAGUGUUACAAAGCAAAGGCCUUUCAC Usp13 mmu-miR-491 673 680 G--------GAGUACCUU--------------CCCAAGGGGUGA |||| |||| | |||||||||| AAAUUAUAACUCA-GGAACAAUUGUUAAAAAUGAGUUCCCCACUU Usp13 mmu-miR-501* 1452 1459 GUUUAGGAA----------------------CGGGCCCACGUAA :||: ||| |||:|||||||| UAAG-CCUGGGCUGUGGGGCCGGGGCUAGAGGCCUGGGUGCAUC Usp13 mmu-miR-540 418 425 ------------------------GGUCCUAGCUGGAGACUGGA ||| :| | :|||||||| CUGGUGGCAUUGUGUCUUCAUUUCCCACAGUA-AGUUCUGACCUA Usp13 mmu-miR-540 1364 1371 G-------------------------GUCCUAGCUGGAGACUGGA ||||| |: ||||||| AGUAAAGGAGAGGCAUUGGGUUGGGACAGGA--GGAGUCUGACCA Usp13 mmu-miR-671 307 314 --GGAGG---------------UCGG-GGAGG-UCCCGAAGGA ||||: :|:| |: ||||||||| UCCCUCUCUUCUGCUUUGGGGGGGUCACUGGUAAGGGCUUCCC Usp13 mmu-miR-683 109 116 C-------------------UCCUGUG-UCGAA--UGUCGUCC |||| ||:| ||||||| AAAAGAAAAAGGAAAAAUAAAGGAAAAAAGUUGGGACAGCAGA Usp13 mmu-miR-699 985 992 G------------CUCGGUCCA-----------GCGUGACGGA |:||||| | |||||||| CUCUACUUCUCUGGGGCCAGCUUUCCCUCUGCCCUCACUGCCUA Usp13 mmu-miR-93 1022 1029 ----GAUGGACGUGCUUG----------------UCGUGAAAC |||:|||| ::| :||||||| CUGCCUAUCUGCUGUGGCCCAUGGUGCAACCUUGGGCACUUUA Usp13 mmu-miR-106b 1008 1029 uagACG-UGACAGUCGUGAAAU ||| || | :|||||||| tggTGCAACCTTGGGCACTTTA Usp13 mmu-miR-129-3p 282 311 uACGAAAAACC--------CCAUUCCCGAA |||||| || ||||||||||| cTGCTTTGGGGGGGTCACTGGTAAGGGCTT Usp13 mmu-miR-141 1889 1914 GGUAG-AAAUGGUC---UGUCACAAU || || | :|::| :|||||||| CCTTCAGTGGCTGGTTTGCAGTGTTA Usp13 mmu-miR-17-5p 1005 1029 ugauggACG-UGACAUUCGUGAAAc ||| || |::||||||| ccatggTGCAACCTTGGGCACTTTa Usp13 mmu-miR-18 1875 1893 AUAGACGUGAUCUACGUGGAAu |: ||| ||| |||||||| TGACTGAACT---TGCACCTTc Usp13 mmu-miR-181d 1103 1139 UUGG--GUGG-CUGUUGU----------UACUUACAa |:|| :|| || |||| :||||||| AGCCGTGGCCTGAGAACAGAGTAGAGTTGTGAATGTg Usp13 mmu-miR-193 1560 1579 GACC--CUGAAACAUCCGGUCAA || | |:|||| |||||||| CTAGCAGGCTTT---GGCCAGTT Usp13 mmu-miR-193 1459 1491 GACCC-UGA-------AAC--AU--CCGGUCAa ||||| :|| ||| || ||||||| CTGGGTGCTGTCTCAGTTGGCTAGGGGCCAGTc Usp13 mmu-miR-200a 1889 1914 uGUAG-CAAUGGUC---UGUCACAAU | || || :|::| :|||||||| cCTTCAGTGGCTGGTTTGCAGTGTTA Usp13 mmu-miR-207 154 183 CUC---CC--UCCUCUCG--GUCCUCUUCg ||| || | || | | | ||||||| GAGCTTGGTCACGACACCTTCTGGAGAAGa Usp13 mmu-miR-20a 1006 1029 gauggACG-UGAUAUUCGUGAAAU ||| || |::|||||||| catggTGCAACCTTGGGCACTTTA Usp13 mmu-miR-20b 1007 1029 auggACG-UGAUACUCGUGAAAc ||| || ||:||||||| atggTGCAACCTTGGGCACTTTa Usp13 mmu-miR-22 789 812 UGUCAAGAAGUUG--ACCGUCGAa || || |||:: | ||||||| ACTGTGCTTTGCCCGGGGCAGCTg Usp13 mmu-miR-296 1373 1396 uGUCCUAACU---CCCCCCCGGGA ||| :|| | |||||||| tCAGAGTTCAAACCCCGGGGCCCT Usp13 mmu-miR-298 962 982 CCUUCUUGUCGGGA-GGAGACGG || |: ||||::| |||||||| GG--GGCCAGCTTTCCCTCTGCC Usp13 mmu-miR-320 950 974 aAGCGGGAGAG--UUGGGUCGAAAa || |:|||| :: |||||||| cTCTACTTCTCTGGGGCCAGCTTTc Usp13 mmu-miR-328 1839 1860 ugccuucccgucucUCCCGGUc ||||||| aaactcagtccctaAGGGCCAc Usp13 mmu-miR-330 780 800 AGAGACGUCCGGGACACGAAACG |||: || | ||||||||||| TCTTGTCA--CACTGTGCTTTGC Usp13 mmu-miR-337 689 708 UUUC-CGUAGUAUAUCCUCGACUu |||| |:| || | ||||||| AAAGAGTA-CAGA---GAGCTGAg Usp13 mmu-miR-342 499 523 cUGCCCACGC-UAAAGACACACUCu |:| |||:| :| |||||||| tATGAGTGTGTGTGAGTGTGTGAGt Usp13 mmu-miR-342 520 547 CUGCCCACGC-UAAAGACACACUCU---- || | |||:| || | |||||| || GA-GTGTGTGTATGTGTGTGTGTGACCTT Usp13 mmu-miR-34a 976 992 uuGUUGGUCGAUUCUGUGACGGu | :|| || ||||||| ctCTGCC--CT----CACTGCCt Usp13 mmu-miR-34b 1622 1641 GUUAGUCGAUUAAUGUGACGGAu | ||:|| | |::||||||| CCATTAG---AGTGTACTGCCTt Usp13 mmu-miR-34b 971 993 guuagucgauuaauGUGACGGAU ||||||||| tttccctctgccctCACTGCCTA Usp13 mmu-miR-34c 969 992 CGUUA-GUCGAUUGAUGUGACGGA || | | ||: | |||||||| GCTTTCCCTCTGCCCTCACTGCCT Usp13 mmu-miR-350 181 207 aCUU-UCACAUA---CCCGAAACACUu ||| | | || |||:||||||| aGAACTGGGAATAGGGGGTTTTGTGAc Usp13 mmu-miR-380-3p 113 132 uUCUACACCUGGUAUGAUGUAu ||||| ||| : ||||||| cAGATGCGGA--GGACTACATg Usp13 mmu-miR-449 965 992 uGGUCGAUUGUUA------UGUGACGGu |||||| | | ||||||| gCCAGCTTTCCCTCTGCCCTCACTGCCt Usp13 mmu-miR-449b 966 992 GGUCG--AUCGUUAC----GUGACGGA ||||| | | || |||||||| CCAGCTTTCCCTCTGCCCTCACTGCCT Usp13 mmu-miR-485-5p 1181 1203 cuuAAGUAGU---GCCGGUCGGAGA ||||||| | ||||||||| cttTTCATCAAATC--CCAGCCTCT Usp13 mmu-miR-488* 1913 1933 cUGGUUCUUUGUCGGAAAGUu || ||| || :|||||||| tACAAAGCAAAGGCCTTTCAc Usp13 mmu-miR-488* 1477 1502 CUGGUUCUUUGUC-----GGAAAGUu |:|:|:|:: ||| ||||||| GGCTAGGGGCCAGTCCTTCCTTTCAt Usp13 mmu-miR-491 659 680 ggaguaccUUCCCAAGGGGUGA | | |||||||||| tgttaaaaATGAGTTCCCCACT Usp13 mmu-miR-501* 1438 1459 guuuaggaaCGGGCCCACGUAa |||:|||||||| gggctagagGCCTGGGTGCATc Usp13 mmu-miR-540 1354 1371 gGUCCUAGCUGGAGACUGGa ||||| |: ||||||| aCAGGA--GGAGTCTGACCa Usp13 mmu-miR-540 409 425 gGUCCUAGCUGGAGACUGGA ||| | | :|||||||| aCAGTA---AGTTCTGACCT Usp13 mmu-miR-671 289 314 ggagguCGGGGA--GGUCCCGAAGGa |:| || : ||||||||| ggggggGTCACTGGTAAGGGCTTCCc Usp13 mmu-miR-683 93 116 cUCCUGUGUCGAA---UGUCGUCc |||| | | || ||||||| aAGGAAAAAAGTTGGGACAGCAGa Usp13 mmu-miR-699 962 992 gCUCGGUCCA-----------GCGUGACGGA |:||||| | | |||||||| gGGGCCAGCTTTCCCTCTGCCCTCACTGCCT Usp13 mmu-miR-93 991 1029 GAUGGAC--------GUGC----UUG----UCGUGAAAc |||:||| ||:| ||| :||||||| CTATCTGCTGTGGCCCATGGTGCAACCTTGGGCACTTTa

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Usp13 RAID00039634 mmu-miR-6240 miRNA MIMAT0024861 Usp13 mRNA 72607 Prediction 0.2202 Usp13 RAID00043862 mmu-miR-6903-5p miRNA MIMAT0027706 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID00075939 mmu-miR-351-5p miRNA MIMAT0000609 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID00135233 mmu-miR-7085-3p miRNA MIMAT0028077 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID00164477 mmu-miR-7667-3p miRNA MIMAT0029841 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID00182954 mmu-miR-6992-3p miRNA MIMAT0027887 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID00223892 mmu-miR-7041-5p miRNA MIMAT0027986 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID00229495 mmu-miR-219b-5p miRNA MIMAT0029806 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID00312801 mmu-miR-449c-5p miRNA MIMAT0003460 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID00314564 mmu-miR-3154 miRNA MIMAT0035714 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID00356618 mmu-miR-342-3p miRNA MIMAT0000590 Usp13 mRNA 72607 Prediction 0.2381 Usp13 RAID00372021 mmu-miR-6946-3p miRNA MIMAT0027793 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID00409232 mmu-miR-330-3p miRNA MIMAT0000569 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID00473674 mmu-miR-488-3p miRNA MIMAT0003450 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID00507016 mmu-miR-193a-3p miRNA MIMAT0000223 Usp13 mRNA 72607 Prediction 0.2202 Usp13 RAID00519753 mmu-miR-7070-5p miRNA MIMAT0028046 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID00594275 mmu-miR-207 miRNA MIMAT0000240 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID00640666 mmu-miR-7003-5p miRNA MIMAT0027910 Usp13 mRNA 72607 Prediction 0.2202 Usp13 RAID00653375 mmu-miR-328-3p miRNA MIMAT0000565 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID00785521 mmu-miR-6931-5p miRNA MIMAT0027762 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID00786486 mmu-miR-7047-3p miRNA MIMAT0027999 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID00793827 mmu-miR-3087-5p miRNA MIMAT0014895 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID00898357 mmu-miR-540-3p miRNA MIMAT0003167 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID00899059 mmu-miR-7055-5p miRNA MIMAT0028014 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID00997917 mmu-miR-6419 miRNA MIMAT0025175 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID01010401 mmu-miR-6997-3p miRNA MIMAT0027897 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID01038244 mmu-miR-6374 miRNA MIMAT0025118 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID01045217 mmu-miR-590-3p miRNA MIMAT0004896 Usp13 mRNA 72607 Prediction 0.2202 Usp13 RAID01108509 mmu-miR-212-3p miRNA MIMAT0000659 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID01138877 mmu-miR-6915-5p miRNA MIMAT0027730 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID01142269 mmu-miR-874-5p miRNA MIMAT0017268 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID01143704 mmu-miR-216c-3p miRNA MIMAT0029889 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID01155065 mmu-miR-7009-3p miRNA MIMAT0027923 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID01161887 mmu-miR-509-5p miRNA MIMAT0004890 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID01204528 mmu-miR-10b-5p miRNA MIMAT0000208 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID01298707 mmu-miR-10a-5p miRNA MIMAT0000648 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID01308973 mmu-miR-103-1-5p miRNA MIMAT0017024 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID01388974 mmu-miR-449b miRNA MIMAT0005447 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID01392478 mmu-miR-3084-3p miRNA MIMAT0014877 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID01414520 mmu-miR-93-5p miRNA MIMAT0000540 Usp13 mRNA 72607 Prediction 0.2381 Usp13 RAID01422969 mmu-miR-6362 miRNA MIMAT0025106 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID01427736 mmu-miR-6974-5p miRNA MIMAT0027850 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID01497919 mmu-miR-7231-5p miRNA MIMAT0028430 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID01530907 mmu-miR-7089-3p miRNA MIMAT0028085 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID01592110 mmu-miR-6715-3p miRNA MIMAT0029877 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID01610233 mmu-miR-19b-3p miRNA MIMAT0000513 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID01611780 mmu-miR-125b-5p miRNA MIMAT0000136 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID01625239 mmu-miR-106b-5p miRNA MIMAT0000386 Usp13 mRNA 72607 Prediction 0.2202 Usp13 RAID01685270 mmu-miR-3083-5p miRNA MIMAT0014874 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID01731191 mmu-miR-18b-5p miRNA MIMAT0004858 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID01759027 mmu-miR-20b-5p miRNA MIMAT0003187 Usp13 mRNA 72607 Prediction 0.2202 Usp13 RAID01765538 mmu-miR-7016-3p miRNA MIMAT0027937 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID01802328 mmu-miR-377-3p miRNA MIMAT0000741 Usp13 mRNA 72607 Prediction 0.2381 Usp13 RAID01862852 mmu-miR-7090-3p miRNA MIMAT0028087 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID01915760 mmu-miR-132-3p miRNA MIMAT0000144 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID01951129 mmu-miR-20a-5p miRNA MIMAT0000529 Usp13 mRNA 72607 Prediction 0.2202 Usp13 RAID02002228 mmu-miR-691 miRNA MIMAT0003470 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID02041384 mmu-miR-17-5p miRNA MIMAT0000649 Usp13 mRNA 72607 Prediction 0.2202 Usp13 RAID02041546 mmu-miR-7061-5p miRNA MIMAT0028026 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID02051478 mmu-miR-149-5p miRNA MIMAT0000159 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID02051837 mmu-miR-210-5p miRNA MIMAT0017052 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID02071055 mmu-miR-1668 miRNA MIMAT0031414 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID02076783 mmu-miR-205-3p miRNA MIMAT0017003 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID02094954 mmu-miR-128-3p miRNA MIMAT0000140 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID02097037 mmu-miR-141-3p miRNA MIMAT0000153 Usp13 mRNA 72607 Prediction 0.2202 Usp13 RAID02098030 mmu-miR-34c-5p miRNA MIMAT0000381 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID02135847 mmu-miR-6344 miRNA MIMAT0025087 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID02185021 mmu-miR-182-5p miRNA MIMAT0000211 Usp13 mRNA 72607 Prediction 0.2381 Usp13 RAID02191703 mmu-miR-669c-3p miRNA MIMAT0017253 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID02199115 mmu-miR-21a-3p miRNA MIMAT0004628 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID02234131 mmu-miR-135b-5p miRNA MIMAT0000612 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID02326727 mmu-miR-466f-3p miRNA MIMAT0004882 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID02343193 mmu-miR-7015-3p miRNA MIMAT0027935 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID02419375 mmu-miR-3094-3p miRNA MIMAT0014910 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID02428732 mmu-miR-449a-5p miRNA MIMAT0001542 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID02477816 mmu-miR-6949-5p miRNA MIMAT0027798 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID02508697 mmu-miR-129-1-3p miRNA MIMAT0016994 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID02527318 mmu-miR-6927-5p miRNA MIMAT0027754 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID02612135 mmu-miR-3572-5p miRNA MIMAT0022986 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID02622944 mmu-miR-544-3p miRNA MIMAT0004941 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID02648489 mmu-miR-6383 miRNA MIMAT0025129 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID02679004 mmu-miR-375-3p miRNA MIMAT0000739 Usp13 mRNA 72607 Prediction 0.2202 Usp13 RAID02745316 mmu-miR-3061-5p miRNA MIMAT0014828 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID02798699 mmu-miR-142a-5p miRNA MIMAT0000154 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID02800610 mmu-miR-466n-3p miRNA MIMAT0014894 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID02865323 mmu-miR-18a-5p miRNA MIMAT0000528 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID02893032 mmu-miR-3113-3p miRNA MIMAT0014960 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID02993013 mmu-miR-491-5p miRNA MIMAT0003486 Usp13 mRNA 72607 Prediction 0.2202 Usp13 RAID03001234 mmu-miR-7649-5p miRNA MIMAT0029800 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID03026290 mmu-miR-107-5p miRNA MIMAT0017048 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID03087782 mmu-miR-290b-3p miRNA MIMAT0029901 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID03089937 mmu-miR-103-2-5p miRNA MIMAT0017025 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID03099957 mmu-miR-204-5p miRNA MIMAT0000237 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID03103862 mmu-miR-6926-5p miRNA MIMAT0027752 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID03109809 mmu-miR-194-2-3p miRNA MIMAT0017073 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID03113032 mmu-miR-340-5p miRNA MIMAT0004651 Usp13 mRNA 72607 Prediction 0.2381 Usp13 RAID03150772 mmu-miR-1903 miRNA MIMAT0007868 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID03177624 mmu-miR-344b-3p miRNA MIMAT0014926 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID03234145 mmu-miR-1953 miRNA MIMAT0009424 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID03259845 mmu-miR-96-5p miRNA MIMAT0000541 Usp13 mRNA 72607 Prediction 0.2202 Usp13 RAID03265355 mmu-miR-6951-3p miRNA MIMAT0027803 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID03281648 mmu-miR-485-5p miRNA MIMAT0003128 Usp13 mRNA 72607 Prediction 0.2202 Usp13 RAID03298629 mmu-miR-672-3p miRNA MIMAT0017241 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID03301966 mmu-miR-6957-5p miRNA MIMAT0027814 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID03328045 mmu-miR-1264-3p miRNA MIMAT0014803 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID03460017 mmu-miR-3544-5p miRNA MIMAT0022353 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID03529279 mmu-miR-135a-5p miRNA MIMAT0000147 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID03570955 mmu-miR-721 miRNA MIMAT0003515 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID03582169 mmu-miR-129-2-3p miRNA MIMAT0000544 Usp13 mRNA 72607 Prediction 0.2202 Usp13 RAID03589137 mmu-miR-592-5p miRNA MIMAT0003730 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID03666452 mmu-miR-101b-3p miRNA MIMAT0000616 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID03741124 mmu-miR-6388 miRNA MIMAT0025135 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID03759084 mmu-miR-143-3p miRNA MIMAT0000247 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID03776960 mmu-miR-421-3p miRNA MIMAT0004869 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID03785124 mmu-miR-34b-5p miRNA MIMAT0000382 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID03806011 mmu-miR-129-5p miRNA MIMAT0000209 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID03817650 mmu-miR-200a-3p miRNA MIMAT0000519 Usp13 mRNA 72607 Prediction 0.2202 Usp13 RAID03817904 mmu-miR-199a-5p miRNA MIMAT0000229 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID03818492 mmu-miR-193b-3p miRNA MIMAT0004859 Usp13 mRNA 72607 Prediction 0.2202 Usp13 RAID03889560 mmu-miR-7682-3p miRNA MIMAT0029885 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID03891670 mmu-miR-3105-3p miRNA MIMAT0014942 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID03906983 mmu-miR-125a-5p miRNA MIMAT0000135 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID03916737 mmu-miR-106a-5p miRNA MIMAT0000385 Usp13 mRNA 72607 Prediction 0.2202 Usp13 RAID03921907 mmu-miR-7116-3p miRNA MIMAT0028130 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID04007056 mmu-miR-7116-5p miRNA MIMAT0028129 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID04047332 mmu-miR-34a-5p miRNA MIMAT0000542 Usp13 mRNA 72607 Prediction 0.1828 Usp13 RAID04053516 mmu-miR-7064-5p miRNA MIMAT0028032 Usp13 mRNA 72607 Prediction 0.1828